Q86VP3
Gene name |
PACS2 |
Protein name |
Phosphofurin acidic cluster sorting protein 2 |
Names |
PACS-2, PACS1-like protein |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:23241 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q86VP3
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q86VP3-F1 | Predicted | AlphaFoldDB |
685 variants for Q86VP3
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV001330281 rs2058502984 |
20 | V>M | Developmental and epileptic encephalopathy, 66 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001267839 rs1435095726 |
123 | N>K | Developmental and epileptic encephalopathy, 66 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001265915 RCV000677126 RCV002265812 rs1555408401 RCV001420210 RCV000782018 RCV001813790 VAR_081137 RCV000585789 CA391174500 |
209 | E>K | Developmental and epileptic encephalopathy, 66 Intellectual disability Variant assessed as Somatic; impact. Developmental and epileptic encephalopathy, 1 Inborn genetic diseases DEE66; increased interaction with SIRT1; increased interaction with HDAC1; increased interaction with TRPV1 [ClinVar, NCI-TCGA, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl NCI-TCGA dbSNP |
|
RCV001252097 rs199748488 CA7388745 RCV001879843 |
399 | D>E | Intellectual disability [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs2081009644 RCV001879844 RCV001252099 |
431 | R>Q | Intellectual disability [ClinVar] | Yes |
ClinVar dbSNP |
|
rs2081012243 RCV001196135 |
461 | D>N | Developmental and epileptic encephalopathy, 66 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001252096 RCV002069334 CA7389172 rs374373404 |
700 | S>L | Intellectual disability [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs2081364319 RCV001197217 |
725 | S>T | Developmental and epileptic encephalopathy, 66 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA391191387 rs1407823064 |
2 | A>T | No |
ClinGen gnomAD |
|
|
CA391191394 rs1315973258 |
3 | E>Q | No |
ClinGen TOPMed |
|
|
rs1463751418 CA391191402 |
4 | R>* | No |
ClinGen gnomAD |
|
| TCGA novel | 4 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1330015149 CA391191415 |
6 | R>L | No |
ClinGen gnomAD |
|
|
CA266519682 rs921808841 |
7 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA391191430 rs1393599725 |
9 | L>F | No |
ClinGen gnomAD |
|
|
CA391191440 rs1331076250 |
10 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1201241587 CA391191452 |
12 | A>V | No |
ClinGen Ensembl |
|
|
CA391191458 rs1265400263 |
13 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1463654330 CA391191455 |
13 | P>S | No |
ClinGen TOPMed |
|
|
CA266519696 rs1051508322 |
15 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA391191474 rs1476260575 |
16 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1168591191 CA391191485 |
18 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1566892440 CA391191626 |
21 | P>A | No |
ClinGen Ensembl |
|
|
CA391191637 rs1198285597 |
22 | M>L | No |
ClinGen gnomAD |
|
|
CA391191676 rs1321059129 |
23 | N>K | No |
ClinGen TOPMed |
|
|
rs1023090773 CA391191718 |
25 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1383045560 CA391191732 |
26 | A>V | No |
ClinGen TOPMed |
|
|
CA266519720 rs970691446 |
27 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA391191752 rs1444165624 |
27 | T>I | No |
ClinGen TOPMed |
|
|
rs750737597 CA7388249 |
33 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs1431172087 CA391191903 |
35 | P>H | No |
ClinGen gnomAD |
|
|
rs1357804593 CA391191901 |
35 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA391191958 rs1169339105 |
38 | V>M | No |
ClinGen gnomAD |
|
|
COSM117608 rs1003413251 CA266534909 |
40 | R>S | ovary [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs1566926190 CA391198395 |
41 | L>V | No |
ClinGen Ensembl |
|
| TCGA novel | 42 | C>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781847893 CA391198413 |
43 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7388263 rs781847893 |
43 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1555403142 CA391198424 |
45 | T>N | No |
ClinGen gnomAD |
|
|
rs587618706 CA7388266 |
50 | V>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1595651086 CA391198463 |
51 | V>G | No |
ClinGen Ensembl |
|
|
rs1182951417 CA391198480 |
54 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA391198546 rs1338363428 |
60 | I>M | No |
ClinGen TOPMed |
|
|
rs117514922 CA7388270 |
61 | S>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7388272 rs781917054 |
62 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782062538 CA7388273 |
63 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA391198595 rs1381174273 |
65 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA7388275 rs144456854 |
66 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs2060030134 RCV001200095 |
66 | V>F | No |
ClinVar dbSNP |
|
|
rs782136702 CA7388276 |
68 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1555403167 CA391198633 |
68 | M>V | No |
ClinGen gnomAD |
|
|
CA391199454 rs1555404167 |
70 | G>R | No |
ClinGen gnomAD |
|
|
rs781944931 CA7388297 |
73 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs782157245 CA7388298 |
73 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1555404175 CA391199496 |
74 | I>V | No |
ClinGen gnomAD |
|
|
CA7388299 rs782814845 |
76 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1209362754 CA391199567 |
81 | V>L | No |
ClinGen TOPMed |
|
|
rs1209362754 CA391199563 |
81 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs782523522 CA7388302 |
84 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs587669814 CA7388305 |
85 | S>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7388306 rs201063885 |
85 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201063885 COSM1368693 CA391199610 |
85 | S>N | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
| rs782816086 | 85 | S>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782278862 CA7388307 |
86 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391199621 rs1384590066 |
86 | G>R | No |
ClinGen TOPMed |
|
|
rs949391349 CA266537097 |
90 | T>R | No |
ClinGen TOPMed |
|
| rs1425778118 | 96 | F>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1566930636 CA391199730 |
96 | F>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
| rs782429503 | 97 | S>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA391199754 rs1555404216 |
98 | L>F | No |
ClinGen gnomAD |
|
|
CA391200430 rs1555405068 |
101 | P>S | No |
ClinGen gnomAD |
|
|
CA7388341 rs146129304 |
103 | F>L | No |
ClinGen ESP ExAC gnomAD |
|
|
rs909204022 CA266538433 |
106 | R>S | No |
ClinGen TOPMed |
|
|
CA7388342 rs782203340 |
107 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA391200507 rs1326995053 |
109 | N>D | No |
ClinGen TOPMed |
|
|
rs781916206 CA7388344 |
109 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1595677337 CA391200514 |
110 | K>E | No |
ClinGen Ensembl |
|
|
CA391200517 rs1224079453 |
110 | K>R | No |
ClinGen TOPMed |
|
|
rs782063559 CA391200541 |
113 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7388346 rs782405230 |
114 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA391200546 rs1442488430 |
114 | M>T | No |
ClinGen TOPMed |
|
|
CA391200580 rs1555405087 |
119 | K>R | No |
ClinGen gnomAD |
|
|
CA7388348 rs782135452 |
120 | R>H | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 124 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA391200632 rs1595677473 |
126 | I>T | No |
ClinGen Ensembl |
|
|
rs1555405097 CA391200627 |
126 | I>V | No |
ClinGen gnomAD |
|
| TCGA novel | 128 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7388351 rs782050259 |
131 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA391200679 rs1555405106 |
134 | A>S | No |
ClinGen gnomAD |
|
|
CA391200680 rs1555405106 |
134 | A>T | No |
ClinGen gnomAD |
|
|
CA7388355 rs377453480 |
134 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA391200683 rs1187996421 |
135 | G>S | No |
ClinGen TOPMed |
|
|
CA391200712 rs1595677585 |
139 | M>V | No |
ClinGen Ensembl |
|
|
rs1463502972 CA391200719 |
140 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA391200724 rs1243711742 |
140 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1595715302 CA391172570 |
142 | V>G | No |
ClinGen Ensembl |
|
|
rs782234312 CA7388385 |
145 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1214319249 CA391172716 |
146 | P>L | No |
ClinGen TOPMed |
|
|
rs1214319249 CA391172718 |
146 | P>R | No |
ClinGen TOPMed |
|
|
rs1555408144 CA391172715 COSM1719841 |
146 | P>S | NS [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA7388387 rs781958319 |
150 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs782108001 CA391172805 |
151 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7388388 RCV002541608 RCV001263325 rs782108001 |
151 | Q>R | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs1555408154 CA391172846 |
152 | V>A | No |
ClinGen gnomAD |
|
|
rs1555408154 CA391172869 |
152 | V>G | No |
ClinGen gnomAD |
|
|
rs782705203 CA7388389 |
152 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781942725 CA7388390 |
154 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs1555408160 CA391172899 |
154 | S>N | No |
ClinGen gnomAD |
|
|
CA7388392 rs782804554 |
157 | S>I | No |
ClinGen ExAC gnomAD |
|
|
CA391173069 rs1555408165 |
158 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs781856573 CA7388393 |
159 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1311131316 CA391173203 |
160 | K>R | No |
ClinGen TOPMed |
|
|
rs1595715461 CA391173221 |
161 | E>K | No |
ClinGen Ensembl |
|
|
rs782514056 CA7388394 |
162 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391173308 rs1359644613 |
163 | P>S | No |
ClinGen TOPMed |
|
|
rs1555408179 CA391173325 |
164 | V>I | No |
ClinGen gnomAD |
|
|
CA7388396 rs111376436 |
166 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7388400 CA7388399 rs782291172 |
168 | E>D | No |
ClinGen ExAC gnomAD |
|
|
COSM953986 rs374606643 CA7388398 |
168 | E>K | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA7388401 rs782634591 |
169 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs782218796 CA7388402 |
172 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 174 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782360509 CA7388403 |
174 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA7388404 rs782583900 |
175 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA7388405 rs782204977 |
176 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA391173649 rs1555408186 |
177 | Q>K | No |
ClinGen gnomAD |
|
|
rs1189415917 CA391173715 |
179 | I>V | No |
ClinGen TOPMed |
|
|
rs782410632 CA7388406 COSM84270 |
180 | D>G | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1566945977 CA391173762 |
181 | H>L | No |
ClinGen Ensembl |
|
| TCGA novel | 182 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782118466 CA7388408 |
182 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA266564945 rs897491909 |
183 | D>A | No |
ClinGen gnomAD |
|
|
CA391173807 rs1555408194 |
183 | D>Y | No |
ClinGen gnomAD |
|
|
CA7388410 rs377643544 |
184 | S>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7388411 rs377643544 |
184 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs8010888 CA7388413 VAR_028947 |
185 | T>A | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs782162190 CA7388414 |
186 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7388417 rs781868356 |
189 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7388416 COSM3689912 rs781868356 |
189 | G>S | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA391174009 rs1555408212 |
192 | A>D | No |
ClinGen gnomAD |
|
|
CA391174003 rs1555408209 |
192 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs374570964 CA7388420 |
195 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1300446 CA391174069 rs1379927163 |
195 | T>M | Variant assessed as Somatic; impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA7388449 rs782222051 |
196 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1347511891 CA391174246 |
197 | N>D | No |
ClinGen TOPMed |
|
|
rs1555408385 CA391174312 |
200 | E>K | No |
ClinGen gnomAD |
|
|
CA391174347 rs1338608229 |
201 | E>D | No |
ClinGen TOPMed |
|
|
rs1555408390 CA7388452 |
206 | F>C | No |
ClinGen Ensembl |
|
| TCGA novel | 208 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782820291 CA7388455 |
210 | Q>K | No |
ClinGen ExAC |
|
|
CA391174553 RCV000995265 rs1595718024 |
211 | E>K | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs781841033 CA7388460 |
215 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7388458 rs782729940 |
215 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA7388461 rs200599760 |
216 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA7388464 rs782653328 |
217 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA266565386 rs147003362 |
217 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7388463 rs147003362 |
217 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782203568 CA7388465 |
218 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs782479015 CA7388466 |
219 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA391175398 rs781891896 |
221 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA7388500 rs782173977 |
223 | D>G | No |
ClinGen ExAC gnomAD |
|
|
COSM3711433 CA391175440 rs1555408517 |
224 | E>K | upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA266565747 rs368127909 |
225 | D>N | No |
ClinGen Ensembl |
|
|
CA7388503 COSM1219101 rs369363280 |
226 | D>N | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA391175513 rs1478820102 |
227 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA7388504 rs782188439 |
228 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1368696 rs782690320 CA7388507 |
229 | V>A | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA7388506 rs587705831 |
229 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7388509 rs782389056 |
232 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7388511 rs782227644 |
234 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA7388512 rs782299087 |
235 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7388513 rs781928681 |
235 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA391175669 rs782422954 |
236 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7388515 rs782422954 |
236 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7388514 rs782151393 |
236 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA7388516 rs145923328 |
238 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA391175723 rs1399881176 |
239 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA266565828 rs782333563 |
239 | I>V | No |
ClinGen gnomAD |
|
|
CA7388518 rs782734762 |
240 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA266565838 rs780880602 |
242 | T>M | Variant assessed as Somatic; 4.619e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA391175774 rs780880602 |
242 | T>R | No |
ClinGen TOPMed gnomAD |
|
|
CA391175788 rs782052957 |
243 | T>K | No |
ClinGen ExAC gnomAD |
|
|
CA7388520 rs782052957 |
243 | T>M | No |
ClinGen ExAC gnomAD |
|
|
rs781821323 CA7388525 |
245 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA7388524 rs782768000 |
245 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782484100 CA7388526 |
247 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs1555408570 CA391175855 |
247 | R>K | No |
ClinGen gnomAD |
|
|
rs782201952 CA7388554 |
248 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782408285 CA7388555 |
249 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs1555408909 CA391176132 |
250 | N>I | No |
ClinGen gnomAD |
|
|
CA7388556 rs781980102 |
251 | F>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 253 | Q>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA391176218 rs1555408910 |
255 | V>M | No |
ClinGen gnomAD |
|
| TCGA novel | 256 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA391176246 rs1555408912 |
257 | A>T | No |
ClinGen gnomAD |
|
|
CA391176297 rs1213266867 |
260 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs782341148 CA7388558 |
260 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs781966275 CA7388559 |
261 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7388560 rs782043163 |
264 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391176357 rs782043163 |
264 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs148337393 CA7388563 |
266 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 267 | E>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782766885 CA7388564 |
267 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs782277649 CA7388601 |
268 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA7388602 rs782277649 |
268 | V>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 270 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781996736 CA7388603 COSM432756 |
271 | S>L | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA391178601 rs1231935589 |
273 | Q>E | No |
ClinGen TOPMed |
|
|
CA391178631 rs1201954528 |
274 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs931825969 CA266571482 |
274 | D>G | No |
ClinGen Ensembl |
|
|
rs1274656440 CA391178662 |
276 | A>S | No |
ClinGen TOPMed |
|
|
rs377732984 CA7388607 |
276 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA391178738 rs1248593195 |
281 | E>K | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 281 | E>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1380289148 CA391178748 |
281 | E>V | No |
ClinGen TOPMed gnomAD |
|
|
CA7388611 rs782797941 |
282 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA391178781 rs141446475 |
283 | E>A | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs141446475 CA266571490 |
283 | E>G | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA391178773 rs1555410545 |
283 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA391178831 rs1555410566 |
286 | L>P | No |
ClinGen gnomAD |
|
|
CA7388613 rs781826931 RCV001092395 |
287 | D>H | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA7388612 rs781826931 |
287 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391178854 rs1424017269 |
288 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs373196528 CA7388617 |
290 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1424206780 CA391178915 |
292 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs782182115 CA7388621 |
293 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs587749018 CA7388620 |
293 | L>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs377119981 CA7388622 |
295 | M>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377119981 CA391178945 |
295 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA391178961 rs1490343454 |
296 | E>Q | No |
ClinGen TOPMed |
|
|
rs1595743934 CA391178980 |
297 | H>P | No |
ClinGen Ensembl |
|
|
rs1555410594 CA391178992 |
298 | P>L | No |
ClinGen gnomAD |
|
| TCGA novel | 299 | S>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7388624 rs4074003 |
299 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA391179015 rs782773260 |
300 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA7388625 rs782773260 |
300 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA7388627 rs782087208 |
302 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7388629 rs370457228 |
305 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782463631 CA7388631 |
306 | E>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 306 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA391179138 rs1555410606 |
308 | D>Y | No |
ClinGen gnomAD |
|
|
CA391179155 COSM953988 rs1375798643 |
309 | D>N | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs782499215 CA7388633 |
310 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs782607135 COSM1219102 CA7388634 |
311 | V>I | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1595744112 CA391179225 |
314 | T>P | No |
ClinGen Ensembl |
|
|
CA7388636 rs782449700 |
317 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA391179311 rs1458292215 |
320 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA391179308 rs1458292215 |
320 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA7388640 rs782630893 |
320 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs782357921 CA7388666 |
325 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA7388667 rs781917667 |
327 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA7388668 rs782062290 |
328 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs782807257 CA7388669 |
329 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs782107495 CA7388671 |
331 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA7388672 rs782775661 |
331 | S>W | No |
ClinGen ExAC gnomAD |
|
|
CA7388673 rs200473031 |
333 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA391180059 rs1555411441 |
334 | E>K | No |
ClinGen gnomAD |
|
|
rs1555411442 CA391180109 |
335 | I>T | No |
ClinGen gnomAD |
|
|
rs1233272473 CA391180099 |
335 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs140169632 CA266573556 |
337 | S>G | No |
ClinGen ESP TOPMed |
|
|
CA7388674 rs782491490 |
340 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA7388676 rs116085053 |
341 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782535850 CA7388677 |
342 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391180251 rs782690675 |
342 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782690675 CA7388678 |
342 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391180367 rs1555411456 |
347 | P>L | No |
ClinGen gnomAD |
|
|
rs1555411455 CA391180350 |
347 | P>S | No |
ClinGen gnomAD |
|
| TCGA novel | 348 | P>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782524811 CA7388680 |
349 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA7388681 rs144782330 |
349 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| rs782325438 | 350 | P>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782179266 CA7388682 |
350 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA391180528 rs1455297417 |
353 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA391180557 rs1395253505 |
354 | P>L | No |
ClinGen TOPMed |
|
|
rs372845683 CA7388700 |
354 | P>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA7388701 rs587614619 |
355 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA7388702 rs782633525 |
357 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782633525 CA391180610 |
357 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782336809 CA7388704 |
358 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV001879925 CA391180616 RCV001255025 rs1488845742 |
358 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar NCI-TCGA TOPMed dbSNP gnomAD |
|
CA391180629 rs1566959338 |
359 | S>T | No |
ClinGen Ensembl |
|
| TCGA novel | 360 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA391180664 rs1595145698 |
360 | L>R | No |
ClinGen Ensembl |
|
|
rs1555411549 CA391180689 |
362 | G>S | No |
ClinGen gnomAD |
|
|
CA391180703 rs1555411554 |
363 | R>G | No |
ClinGen gnomAD |
|
|
CA266573842 rs782571727 |
364 | Q>L | No |
ClinGen gnomAD |
|
|
CA391180726 rs782571727 |
364 | Q>R | No |
ClinGen gnomAD |
|
|
rs1555411561 CA391180740 |
365 | P>L | No |
ClinGen gnomAD |
|
|
rs1555411561 CA391180738 |
365 | P>R | No |
ClinGen gnomAD |
|
|
rs782010997 CA7388706 |
367 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782010997 CA391180761 |
367 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1555411566 CA391180799 |
369 | V>A | No |
ClinGen gnomAD |
|
|
CA7388707 rs782331454 |
372 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391180838 rs1555411570 |
372 | T>M | No |
ClinGen gnomAD |
|
|
CA391180831 rs782331454 |
372 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1374693365 CA391180858 |
374 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1029102035 CA266574399 |
376 | G>A | No |
ClinGen gnomAD |
|
|
CA391181146 rs782055140 |
376 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA7388730 rs782055140 |
376 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA391181148 rs1029102035 |
376 | G>V | No |
ClinGen gnomAD |
|
|
rs1555411834 CA391181163 |
379 | G>S | No |
ClinGen gnomAD |
|
|
rs374328880 CA7388732 |
380 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7388733 rs374328880 |
380 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7388731 rs201854785 |
380 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA391181167 rs201854785 |
380 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782094748 CA7388736 |
382 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1595149392 CA391181187 |
383 | H>P | No |
ClinGen Ensembl |
|
|
CA391181196 rs1555411853 |
384 | P>L | No |
ClinGen gnomAD |
|
|
CA391181195 rs1555411853 |
384 | P>R | No |
ClinGen gnomAD |
|
|
rs782701010 CA391181193 |
384 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782701010 CA7388737 |
384 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 385 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7388741 rs781860105 |
392 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA7388742 rs782528386 |
393 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA266574442 rs972818545 |
394 | E>A | No |
ClinGen TOPMed |
|
|
rs1555411865 CA391181290 |
399 | D>H | No |
ClinGen gnomAD |
|
|
CA266574477 rs931236756 |
401 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs139419197 CA7388748 |
402 | T>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7388747 rs139419197 |
402 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs781917594 CA7388752 |
406 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA7388753 rs145012533 |
406 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782111780 CA7388756 |
409 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA391181358 rs1555411885 |
410 | R>K | No |
ClinGen Ensembl |
|
| TCGA novel | 410 | R>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7388758 rs781833579 |
421 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7388759 rs782493843 |
422 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs782736529 CA7388784 |
425 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782736529 CA7388783 |
425 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391181467 rs1555412122 |
425 | E>V | No |
ClinGen gnomAD |
|
|
CA391181474 rs1555412125 |
426 | G>E | No |
ClinGen gnomAD |
|
|
rs1555412128 CA391181493 |
429 | A>T | No |
ClinGen gnomAD |
|
|
CA391181499 rs1555412129 |
430 | G>S | No |
ClinGen gnomAD |
|
|
CA391181506 rs1555412137 |
431 | R>* | No |
ClinGen gnomAD |
|
|
rs782447902 CA7388785 |
432 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1555412143 CA391181522 |
434 | R>Q | No |
ClinGen gnomAD |
|
| TCGA novel | 434 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA391181601 rs1555412152 |
441 | R>Q | No |
ClinGen gnomAD |
|
|
CA7388786 rs147649140 |
441 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 442 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 443 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1555412158 CA391181639 |
444 | A>V | No |
ClinGen gnomAD |
|
|
CA7388788 rs782557224 |
445 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782277412 CA391181646 |
445 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA391181691 rs1555412162 |
448 | N>S | No |
ClinGen gnomAD |
|
| TCGA novel | 449 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1211341850 CA391181717 |
450 | R>Q | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 453 | S>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782260838 CA7388790 |
457 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA391181810 rs782260838 |
457 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA391181825 rs1284802442 |
458 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1237381750 CA391181830 |
458 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs898078656 CA266575137 |
459 | C>F | No |
ClinGen TOPMed gnomAD |
|
|
CA7388791 rs782338637 |
459 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7388792 rs587775302 |
460 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs372204325 CA7388795 |
462 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372204325 CA7388794 |
462 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782112732 CA7388796 |
463 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1418013429 CA391181888 |
463 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA391181887 rs782112732 |
463 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1410234606 CA391181897 |
464 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA266575152 rs888172387 |
464 | S>T | No |
ClinGen Ensembl |
|
|
CA391181964 rs1373882825 |
468 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA7388818 rs782415606 |
469 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA7388819 rs782028176 |
470 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1555412306 CA391181971 |
470 | R>T | No |
ClinGen gnomAD |
|
|
rs782122079 CA7388820 |
473 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs781824809 CA391182009 |
475 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7388824 rs782698341 |
479 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782698341 CA391182037 |
479 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781811072 CA7388825 |
480 | I>N | No |
ClinGen ExAC gnomAD |
|
|
rs1251824361 CA391182055 |
482 | I>N | No |
ClinGen TOPMed gnomAD |
|
|
rs150142760 CA266575521 |
483 | S>F | No |
ClinGen ESP |
|
|
CA7388828 rs781870630 |
484 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391182065 rs781870630 |
484 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391182082 rs1555412321 |
486 | Q>P | No |
ClinGen gnomAD |
|
|
rs781787526 CA266575538 |
487 | L>V | No |
ClinGen TOPMed |
|
|
rs1353150695 CA391182094 |
488 | P>S | No |
ClinGen TOPMed |
|
|
CA391182098 rs1555412324 |
489 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs61984702 CA266575546 |
490 | N>K | No |
ClinGen Ensembl |
|
|
CA7388832 rs782325580 |
492 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
VAR_053798 rs4076933 |
493 | L>S | No |
UniProt dbSNP |
|
|
COSM1607433 rs1555412328 CA391182449 |
494 | V>I | liver [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs782287853 CA7388834 |
496 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782371346 CA391182488 |
497 | S>* | No |
ClinGen ExAC gnomAD |
|
|
CA7388835 rs782371346 |
497 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA391182517 rs1347154105 |
499 | W>C | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 503 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781949173 CA391182628 |
506 | D>A | No |
ClinGen ExAC gnomAD |
|
|
rs782301844 CA7388858 |
506 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781949173 CA7388860 |
506 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs782301844 CA7388859 |
506 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1555412408 CA391182634 |
507 | V>I | No |
ClinGen gnomAD |
|
|
rs1555412412 CA391182668 |
510 | R>K | No |
ClinGen gnomAD |
|
|
rs1555412415 CA391182672 |
510 | R>S | No |
ClinGen gnomAD |
|
|
rs782698783 CA7388862 |
511 | H>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 512 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7388864 rs782149744 COSM953990 |
512 | T>M | Variant assessed as Somatic; 5.804e-05 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs782149744 CA391182693 |
512 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1555412421 CA391182709 |
514 | P>S | No |
ClinGen gnomAD |
|
|
CA7388867 rs372817963 |
515 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA391182729 rs1555412428 |
516 | V>L | No |
ClinGen gnomAD |
|
|
CA266575830 rs587696332 |
518 | T>A | No |
ClinGen 1000Genomes |
|
|
rs782434828 CA7388870 |
519 | C>F | No |
ClinGen ExAC gnomAD |
|
|
rs782434828 CA391182768 |
519 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA391182781 rs1555412447 |
520 | S>C | No |
ClinGen gnomAD |
|
|
CA391182782 rs1555412447 |
520 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
RCV000995266 rs782592280 CA7388871 |
522 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs201367145 CA7388873 |
524 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA391182808 rs201367145 |
524 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7388874 rs375996521 |
526 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1555412458 CA391182835 |
527 | A>P | No |
ClinGen gnomAD |
|
|
CA391182834 rs1555412458 |
527 | A>T | No |
ClinGen gnomAD |
|
|
COSM953991 CA7388876 rs782352968 |
527 | A>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA391182855 rs781912375 |
528 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1555412464 CA391182866 |
529 | S>R | No |
ClinGen gnomAD |
|
|
rs984800761 CA266575874 |
530 | T>I | No |
ClinGen TOPMed |
|
|
rs782187620 CA7388878 |
531 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7388880 rs782033591 |
532 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs782114646 CA7388881 |
534 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA266575891 rs982124932 |
534 | R>W | No |
ClinGen Ensembl |
|
|
rs1555412478 CA391182916 |
535 | I>T | No |
ClinGen gnomAD |
|
|
rs1555412480 CA391182946 |
537 | R>S | No |
ClinGen gnomAD |
|
|
CA7388883 rs781953447 |
538 | Y>D | No |
ClinGen ExAC gnomAD |
|
|
CA7388944 rs782391411 |
541 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1202811767 CA391183576 |
542 | N>H | No |
ClinGen TOPMed |
|
|
rs1555412655 CA391183602 |
544 | Q>R | No |
ClinGen gnomAD |
|
|
CA391183630 rs1555412660 |
547 | T>A | No |
ClinGen gnomAD |
|
|
rs782691584 CA7388947 |
547 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs781934467 CA7388948 |
548 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA7388950 rs782813009 |
549 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA7388951 rs781864278 |
550 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs782751075 CA7388953 |
552 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs782459999 CA7388955 |
553 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA7388956 COSM697774 rs782650153 |
554 | A>V | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA7388958 rs782500261 |
556 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1555412683 CA391183725 |
557 | Q>E | No |
ClinGen gnomAD |
|
|
rs1595158068 CA391183745 |
559 | Y>S | No |
ClinGen Ensembl |
|
|
rs200405575 CA7388961 |
561 | S>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA391183761 rs1444048860 |
562 | A>T | No |
ClinGen TOPMed |
|
|
CA391183768 rs1354803556 |
563 | I>V | No |
ClinGen TOPMed |
|
|
rs142789946 CA7388963 |
564 | L>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1555412690 CA391183779 |
565 | R>Q | No |
ClinGen gnomAD |
|
|
rs782038571 CA7388965 |
565 | R>W | Variant assessed as Somatic; 5.304e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1163594596 CA391183782 |
566 | L>I | No |
ClinGen TOPMed |
|
|
rs782395088 CA7388968 |
573 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1555412698 CA391183831 |
573 | H>Y | No |
ClinGen gnomAD |
|
|
CA7388969 rs782104181 |
576 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA391183858 rs1481804057 |
577 | D>G | No |
ClinGen TOPMed |
|
|
CA7388971 rs74466343 |
577 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA391183856 rs74466343 |
577 | D>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1555412705 CA391183878 |
580 | G>S | No |
ClinGen gnomAD |
|
|
CA391183892 rs1252899760 |
582 | M>V | No |
ClinGen TOPMed |
|
|
rs782756538 CA7388973 |
583 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7388974 rs781868059 |
583 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA391183900 rs782756538 |
583 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7389007 rs781953013 |
594 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA266576925 rs895502253 |
595 | A>G | No |
ClinGen Ensembl |
|
|
rs1055482161 CA266576922 |
595 | A>T | No |
ClinGen Ensembl |
|
|
CA7389009 rs782312228 |
601 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1365157286 CA391184035 |
603 | Y>N | No |
ClinGen TOPMed |
|
|
CA7389011 rs757517050 |
604 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7389012 rs782813839 |
604 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs782727405 CA7389015 |
607 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA7389014 rs201080466 |
607 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7389017 rs782444788 |
611 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs781901106 CA7389019 |
613 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA7389020 rs782496059 |
613 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7389021 rs782655286 |
615 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA7389023 rs782493331 |
616 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA391184132 rs1555413024 |
617 | L>V | No |
ClinGen gnomAD |
|
|
CA7389024 rs369474993 |
618 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782192283 CA7389025 |
619 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391184151 rs1555413041 |
620 | K>E | No |
ClinGen gnomAD |
|
|
CA391184161 rs1555413048 |
621 | L>P | No |
ClinGen gnomAD |
|
|
CA391184174 rs782249992 |
623 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA391184175 rs782249992 |
623 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA7389028 rs782249992 |
623 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA391184182 rs1555413050 |
624 | Q>H | No |
ClinGen gnomAD |
|
|
rs1242333746 CA391184185 |
625 | S>G | No |
ClinGen TOPMed |
|
|
CA391184193 rs1198463942 |
626 | A>P | No |
ClinGen TOPMed |
|
|
CA7389029 COSM1235770 rs201652289 |
626 | A>V | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs376311769 COSM1607434 CA7389062 |
630 | T>M | Variant assessed as Somatic; 0.0 impact. liver [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA391184239 rs1555413174 |
631 | P>L | No |
ClinGen gnomAD |
|
|
CA391184250 rs1555413175 |
633 | I>L | No |
ClinGen gnomAD |
|
|
rs1595164551 CA391184266 |
635 | S>L | No |
ClinGen Ensembl |
|
|
COSM3689913 CA7389064 rs782754114 |
636 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA391184271 rs1555413183 |
636 | R>H | No |
ClinGen gnomAD |
|
|
rs781787263 CA7389066 |
638 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391184286 rs1555413191 |
639 | Q>* | No |
ClinGen gnomAD |
|
|
rs587769052 CA391184292 |
639 | Q>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs781877756 CA7389069 |
641 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1555413199 CA391184311 |
642 | A>G | No |
ClinGen gnomAD |
|
|
CA391184308 rs369928489 |
642 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7389070 rs369928489 |
642 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1555413201 CA391184316 |
643 | G>E | No |
ClinGen gnomAD |
|
|
CA391184313 rs1291794705 |
643 | G>R | No |
ClinGen TOPMed |
|
|
CA391184323 rs1555413202 |
644 | A>V | No |
ClinGen gnomAD |
|
|
rs587640790 CA7389071 |
645 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs587640790 CA391184328 |
645 | N>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA391184333 rs1349540794 |
646 | C>R | No |
ClinGen TOPMed gnomAD |
|
|
CA7389072 rs782388584 |
647 | A>T | No |
ClinGen ExAC |
|
|
rs1555413216 CA391184354 |
649 | Q>* | No |
ClinGen gnomAD |
|
|
CA391184357 rs1286067981 |
649 | Q>R | No |
ClinGen TOPMed |
|
|
CA391184370 rs868930556 |
651 | P>H | No |
ClinGen Ensembl |
|
|
CA391184367 rs1555413219 |
651 | P>S | No |
ClinGen gnomAD |
|
|
CA391184374 rs1555413224 |
652 | I>V | No |
ClinGen gnomAD |
|
| TCGA novel | 653 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782564104 COSM953992 CA7389074 |
655 | A>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA391184437 rs1555413235 |
661 | Q>* | No |
ClinGen gnomAD |
|
|
CA391184450 rs1436413785 COSM1514741 |
662 | K>N | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs1348621927 CA391184456 |
663 | S>I | No |
ClinGen TOPMed gnomAD |
|
|
CA391184454 rs1348621927 |
663 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
rs781785073 CA7389105 |
664 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA391184936 rs782462194 |
665 | D>E | No |
ClinGen ExAC TOPMed |
|
| TCGA novel | 667 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781905333 CA7389109 |
668 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1555414465 CA391184964 |
668 | S>T | No |
ClinGen gnomAD |
|
| TCGA novel | 672 | F>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782503861 CA7389110 |
673 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7389111 COSM953994 rs782503861 |
673 | I>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 682 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7389133 rs781848588 |
683 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1329088846 CA391185533 |
684 | V>M | No |
ClinGen TOPMed |
|
|
CA7389135 rs587750276 |
685 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs368898941 CA7389137 |
688 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1555414742 CA391185587 |
689 | A>T | No |
ClinGen gnomAD |
|
|
CA391185594 rs1555414745 |
689 | A>V | No |
ClinGen gnomAD |
|
|
CA391185607 rs1555414748 |
691 | S>P | No |
ClinGen gnomAD |
|
|
rs1555414840 CA391185667 |
693 | D>N | No |
ClinGen gnomAD |
|
|
CA7389162 rs782260236 |
694 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1451165425 CA391185697 |
695 | D>A | No |
ClinGen TOPMed gnomAD |
|
|
CA391185701 rs139536717 |
695 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA391185698 rs1451165425 |
695 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA391185699 rs1451165425 |
695 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
CA391185695 rs1555414848 |
695 | D>Y | No |
ClinGen gnomAD |
|
|
rs1555414854 CA391185706 |
696 | D>A | No |
ClinGen gnomAD |
|
|
CA7389166 rs782667380 |
696 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs969435213 CA266583154 |
696 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA7389167 rs781979650 |
697 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782090493 CA7389168 |
697 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA391185736 rs1555414866 |
699 | P>L | No |
ClinGen gnomAD |
|
|
CA7389171 rs781857860 |
699 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA391185737 rs1555414868 |
700 | S>T | No |
ClinGen gnomAD |
|
|
CA391185780 rs1395890539 |
703 | G>D | No |
ClinGen TOPMed |
|
|
rs587745743 CA7389176 |
704 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782212103 CA7389177 |
705 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA7389179 rs782516261 |
705 | L>R | No |
ClinGen ExAC |
|
|
CA391185826 rs1555414895 |
708 | T>I | No |
ClinGen gnomAD |
|
|
CA391185819 rs1595188562 |
708 | T>P | No |
ClinGen Ensembl |
|
|
rs587610084 CA7389180 |
709 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7389182 rs147461490 |
710 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7389183 rs147461490 |
710 | P>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 711 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA391185846 rs1195604188 |
711 | S>P | No |
ClinGen TOPMed |
|
|
CA391185861 rs1206720330 |
712 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs782122419 CA7389187 |
712 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1206720330 CA391185860 |
712 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs782816794 CA7389188 |
713 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs782023692 CA7389189 |
714 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 715 | A>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1342459526 CA391185879 |
715 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1342459526 CA391185880 |
715 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA7389190 rs782067835 |
715 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391185925 rs587624621 |
719 | A>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA7389192 rs587624621 |
719 | A>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 721 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1555414950 CA391185961 |
722 | T>S | No |
ClinGen gnomAD |
|
|
CA7389196 rs781856072 |
723 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1363795667 CA391185967 |
723 | P>S | No |
ClinGen TOPMed |
|
|
CA7389198 rs782663401 |
724 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA7389201 rs782503263 |
727 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs372438559 CA7389202 |
728 | S>L | No |
ClinGen ESP TOPMed |
|
|
rs372438559 CA391186024 |
728 | S>W | No |
ClinGen ESP TOPMed |
|
|
CA391186025 rs1175727279 |
729 | V>M | No |
ClinGen TOPMed |
|
|
rs782264777 CA7389205 |
730 | S>G | No |
ClinGen ExAC gnomAD |
|
|
COSM3814368 rs1555414972 CA391186049 |
731 | G>E | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs782373206 CA7389206 |
731 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs782686270 CA7389207 |
732 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs1555414976 CA391186084 |
734 | S>F | No |
ClinGen gnomAD |
|
|
CA7389209 rs782331582 |
736 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1307541770 CA391186290 |
738 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA7389232 rs201037630 |
739 | G>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs781913910 CA7389233 |
740 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7389235 rs587608008 |
741 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs151199705 CA7389237 |
742 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7389239 rs140331410 |
743 | E>K | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1595192643 CA391186448 |
745 | M>R | No |
ClinGen Ensembl |
|
|
rs1297522038 CA391186662 |
753 | T>M | No |
ClinGen TOPMed |
|
|
rs1555415230 CA391186680 |
754 | A>T | No |
ClinGen gnomAD |
|
|
rs150343495 CA7389242 |
756 | Q>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA391186787 rs1555415243 |
757 | P>L | No |
ClinGen gnomAD |
|
|
rs936461647 CA266583933 |
758 | A>T | No |
ClinGen Ensembl |
|
|
CA7389243 rs587631980 |
758 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7389245 rs782288505 |
764 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA7389248 rs782572509 |
765 | E>K | No |
ClinGen ExAC |
|
|
rs1555415261 CA391187104 |
766 | K>N | No |
ClinGen gnomAD |
|
|
rs782175813 CA7389249 |
768 | D>A | No |
ClinGen ExAC gnomAD |
|
|
rs1595192874 CA391187180 |
769 | L>V | No |
ClinGen Ensembl |
|
|
CA391187330 rs1555415269 |
774 | N>Y | No |
ClinGen gnomAD |
|
|
CA7389252 rs782254328 |
775 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782254328 CA391187393 |
775 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391187390 rs782254328 |
775 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1555415274 CA391187592 |
780 | F>L | No |
ClinGen gnomAD |
|
|
rs146590511 CA7389255 |
781 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA391187610 rs1595193008 |
781 | R>W | No |
ClinGen Ensembl |
|
|
CA7389256 rs782710750 |
782 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
CA391187911 rs1273415353 |
790 | S>G | No |
ClinGen TOPMed |
|
|
CA391187956 rs1555415282 |
791 | S>I | No |
ClinGen gnomAD |
|
|
rs782086378 CA391187971 |
791 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391187988 rs782776841 |
792 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782776841 CA7389259 |
792 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1555415288 CA391187998 |
792 | G>V | No |
ClinGen gnomAD |
|
|
rs782549623 CA7389261 |
793 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391188008 rs1555415290 |
793 | E>K | No |
ClinGen gnomAD |
|
|
rs1323897518 CA391188058 |
794 | A>V | No |
ClinGen TOPMed |
|
|
rs781798642 CA7389263 |
795 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs1440257849 CA391188067 |
795 | A>S | No |
ClinGen TOPMed |
|
|
rs1555415301 CA391188676 |
796 | A>V | No |
ClinGen gnomAD |
|
|
CA7389265 rs782617721 |
797 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA7389266 rs782208120 |
797 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1555415315 CA391188735 |
801 | S>T | No |
ClinGen gnomAD |
|
|
rs782689380 CA7389271 |
803 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA7389275 rs782227157 |
804 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA7389274 rs781922659 |
804 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1001663611 CA266584006 |
809 | K>N | No |
ClinGen Ensembl |
|
|
rs1034763532 CA266584022 |
813 | V>M | No |
ClinGen Ensembl |
|
|
CA266584484 rs369856943 |
814 | M>I | No |
ClinGen ESP |
|
|
rs781827237 CA7389308 |
814 | M>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 818 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs587742490 CA391189222 |
820 | A>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA391189218 rs1555415498 |
820 | A>S | No |
ClinGen gnomAD |
|
|
CA7389310 rs587742490 |
820 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 823 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA391189303 rs141292203 |
824 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7389313 rs782583159 |
825 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782583159 CA391189306 |
825 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391189332 rs1222535909 |
826 | E>D | No |
ClinGen TOPMed |
|
|
rs782178821 CA7389314 |
826 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA391189434 rs782356019 |
831 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs782356019 CA7389315 |
831 | C>S | No |
ClinGen ExAC gnomAD |
|
|
rs1555415506 CA391189436 |
831 | C>Y | No |
ClinGen gnomAD |
|
|
rs1453563755 CA391189468 |
832 | I>T | No |
ClinGen TOPMed |
|
|
rs202040880 CA266584556 |
834 | G>V | No |
ClinGen Ensembl |
|
|
CA7389316 rs782592694 |
836 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA391189648 rs1282521513 |
837 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA7389318 rs587749973 |
841 | T>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA7389319 rs782020458 |
842 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs1555415524 CA391189818 |
842 | A>V | No |
ClinGen gnomAD |
|
|
rs1204919222 CA391189857 |
844 | Q>R | No |
ClinGen TOPMed |
|
|
rs782072848 CA7389320 |
850 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782072848 CA391190019 |
850 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1555415531 CA391190018 |
850 | R>W | No |
ClinGen gnomAD |
|
| TCGA novel | 851 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7389352 rs200116250 |
853 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 854 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA391190456 rs1555415993 |
855 | G>S | No |
ClinGen gnomAD |
|
|
CA266585173 rs782784325 |
856 | V>M | No |
ClinGen TOPMed |
|
|
CA7389355 rs781798535 |
857 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1595201350 CA391190526 |
858 | C>G | No |
ClinGen Ensembl |
|
|
CA7389357 rs782503189 |
859 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782258879 CA7389358 |
860 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391190626 rs1254094658 |
861 | V>I | No |
ClinGen TOPMed |
|
|
rs782685668 CA7389360 |
862 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA7389362 rs782323038 |
867 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA7389364 rs367840030 |
868 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1317634807 CA391190815 |
868 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs374638981 CA266585192 |
872 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA TOPMed |
|
CA7389368 rs782808082 |
874 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs782808082 CA391190920 |
874 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA7389369 rs781943127 |
876 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782745738 CA7389371 |
877 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs782057690 CA7389370 |
877 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA391191044 rs1555416018 |
879 | I>V | No |
ClinGen gnomAD |
|
|
CA7389373 rs138788243 |
881 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs149437508 CA391191140 |
882 | F>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM1368699 RCV000995267 CA7389375 rs368316410 CA7389376 |
883 | G>R | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD ClinVar dbSNP |
|
CA391191193 rs1555416036 |
884 | H>Q | No |
ClinGen gnomAD |
|
|
CA7389377 rs782581214 |
884 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs991387503 CA266585200 |
884 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1445278464 CA391191231 |
886 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA7389378 rs143800881 |
887 | A>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7389379 rs143800881 |
887 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7389380 rs782587138 |
887 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA391191283 CA391191290 rs1197920027 |
889 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA391191295 rs1555416057 |
890 | F>Q | No |
ClinGen gnomAD |
1 associated diseases with Q86VP3
[MIM: 618067]: Developmental and epileptic encephalopathy 66 (DEE66)
A form of epileptic encephalopathy, a heterogeneous group of severe early-onset epilepsies characterized by refractory seizures, neurodevelopmental impairment, and poor prognosis. Development is normal prior to seizure onset, after which cognitive and motor delays become apparent. DEE66 is an autosomal dominant form characterized by onset of seizures in first days or weeks of life. {ECO:0000269|PubMed:29656858}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A form of epileptic encephalopathy, a heterogeneous group of severe early-onset epilepsies characterized by refractory seizures, neurodevelopmental impairment, and poor prognosis. Development is normal prior to seizure onset, after which cognitive and motor delays become apparent. DEE66 is an autosomal dominant form characterized by onset of seizures in first days or weeks of life. {ECO:0000269|PubMed:29656858}. Note=The disease is caused by variants affecting the gene represented in this entry.
No regional properties for Q86VP3
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q86VP3 | |||
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). |
| mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| transmembrane transporter binding | Binding to a transmembrane transporter, a protein or protein complex that enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
6 GO annotations of biological process
| Name | Definition |
|---|---|
| apoptotic process | A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died. |
| autophagosome assembly | The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm. |
| endoplasmic reticulum calcium ion homeostasis | Any process involved in the maintenance of an internal steady state of calcium ions within the endoplasmic reticulum of a cell or between the endoplasmic reticulum and its surroundings. |
| mitochondrion-endoplasmic reticulum membrane tethering | The attachment of a mitochondrion and an endoplasmic reticulum via molecular tethers that physically bridge their respective membranes and attach them to each other. The tethering may facilitate exchange of metabolites between the organelles. |
| protein localization to phagophore assembly site | Any process in which a protein is transported to, or maintained at, the phagophore assembly site (PAS). |
| protein localization to plasma membrane | A process in which a protein is transported to, or maintained in, a specific location in the plasma membrane. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q3V3Q7 | Pacs2 | Phosphofurin acidic cluster sorting protein 2 | Mus musculus (Mouse) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAERGRLGLP | GAPGALNTPV | PMNLFATWEV | DGSSPSCVPR | LCSLTLKKLV | VFKELEKELI |
| 70 | 80 | 90 | 100 | 110 | 120 |
| SVVIAVKMQG | SKRILRSHEI | VLPPSGQVET | DLALTFSLQY | PHFLKREGNK | LQIMLQRRKR |
| 130 | 140 | 150 | 160 | 170 | 180 |
| YKNRTILGYK | TLAAGSISMA | EVMQHPSEGG | QVLSLCSSIK | EAPVKAAEIW | IASLSSQPID |
| 190 | 200 | 210 | 220 | 230 | 240 |
| HEDSTMQAGP | KAKSTDNYSE | EEYESFSSEQ | EASDDAVQGQ | DLDEDDFDVG | KPKKQRRSIV |
| 250 | 260 | 270 | 280 | 290 | 300 |
| RTTSMTRQQN | FKQKVVALLR | RFKVSDEVLD | SEQDPAEHIP | EAEEDLDLLY | DTLDMEHPSD |
| 310 | 320 | 330 | 340 | 350 | 360 |
| SGPDMEDDDS | VLSTPKPKLR | PYFEGLSHSS | SQTEIGSIHS | ARSHKEPPSP | ADVPEKTRSL |
| 370 | 380 | 390 | 400 | 410 | 420 |
| GGRQPSDSVS | DTVALGVPGP | REHPGQPEDS | PEAEASTLDV | FTERLPPSGR | ITKTESLVIP |
| 430 | 440 | 450 | 460 | 470 | 480 |
| STRSEGKQAG | RRGRSTSLKE | RQAARPQNER | ANSLDNERCP | DARSQLQIPR | KTVYDQLNHI |
| 490 | 500 | 510 | 520 | 530 | 540 |
| LISDDQLPEN | IILVNTSDWQ | GQFLSDVLQR | HTLPVVCTCS | PADVQAAFST | IVSRIQRYCN |
| 550 | 560 | 570 | 580 | 590 | 600 |
| CNSQPPTPVK | IAVAGAQHYL | SAILRLFVEQ | LSHKTPDWLG | YMRFLVIPLG | SHPVARYLGS |
| 610 | 620 | 630 | 640 | 650 | 660 |
| VDYRYNNFFQ | DLAWRDLFNK | LEAQSAVQDT | PDIVSRITQY | IAGANCAHQL | PIAEAMLTYK |
| 670 | 680 | 690 | 700 | 710 | 720 |
| QKSPDEESSQ | KFIPFVGVVK | VGIVEPSSAT | SGDSDDAAPS | GSGTLSSTPP | SASPAAKEAS |
| 730 | 740 | 750 | 760 | 770 | 780 |
| PTPPSSPSVS | GGLSSPSQGV | GAELMGLQVD | YWTAAQPADR | KRDAEKKDLP | VTKNTLKCTF |
| 790 | 800 | 810 | 820 | 830 | 840 |
| RSLQVSRLPS | SGEAAATPTM | SMTVVTKEKN | KKVMFLPKKA | KDKDVESKSQ | CIEGISRLIC |
| 850 | 860 | 870 | 880 | ||
| TARQQQNMLR | VLIDGVECSD | VKFFQLAAQW | SSHVKHFPIC | IFGHSKATF |