Q84UQ3
Gene name |
Os08g0159800 (LOC_Os08g06330, P0498E12.129, P0672D01.112) |
Protein name |
Zinc finger CCCH domain-containing protein 56 |
Names |
OsC3H56 |
Species |
Oryza sativa subsp japonica (Rice) |
KEGG Pathway |
osa:4344715 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q84UQ3
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q84UQ3-F1 | Predicted | AlphaFoldDB |
No variants for Q84UQ3
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q84UQ3 | |||||
No associated diseases with Q84UQ3
4 regional properties for Q84UQ3
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Zinc finger, CCCH-type | 87 - 114 | IPR000571-1 |
| domain | Zinc finger, CCCH-type | 169 - 197 | IPR000571-2 |
| domain | Zinc finger, CCCH-type | 245 - 273 | IPR000571-3 |
| domain | E3 ligase, CCCH-type zinc finger | 173 - 195 | IPR041367 |
No GO annotations of cellular component
| Name | Definition |
|---|---|
| No GO annotations for cellular component |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| metal ion binding | Binding to a metal ion. |
| mRNA binding | Binding to messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns. |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P22893 | Zfp36 | mRNA decay activator protein ZFP36 | Mus musculus (Mouse) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MDYTNAIHII | PDAAGPDAWA | NAAAQGGDAG | IWATEDDYNS | QWNADGGGGG | SSRAGSEQPP |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PGKKSRGGGG | GEGGGNTSKS | RAIGKMFFKT | KLCCKFRAGT | CPYVTNCNFA | HGMEELRKPP |
| 130 | 140 | 150 | 160 | 170 | 180 |
| PNWQEIVAAH | EEATEAREEH | QIPIMTSSGP | TAGGDAGCGG | GGGGGSGRAY | KGRHCKKFYT |
| 190 | 200 | 210 | 220 | 230 | 240 |
| DEGCPYGDAC | TFLHDEQSKA | RESVAISLSP | SVGGGGGGGS | YNSAAAAAAS | ASAAAGNGPM |
| 250 | 260 | 270 | 280 | 290 | 300 |
| QKPSNWKTRI | CNKWEMTGYC | PFGSKCHFAH | GAAELHKYGG | GLVDIDSRDA | AATPDSKQAV |
| 310 | 320 | 330 | 340 | 350 | 360 |
| VSAKAPAETA | AASTTVLPHA | DVYHLGVQAQ | RSTIAGQRSG | QVQRPIQKWK | GPDKISRIYG |
| DWIDETE |