Q7Z3J2
Gene name |
VPS35L |
Protein name |
VPS35 endosomal protein-sorting factor-like |
Names |
Esophageal cancer-associated protein |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:57020 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
5 structures for Q7Z3J2
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 8ESE | X-ray | 135 A | X | 16-38 | PDB |
| 8SYM | EM | 320 A | A | 1-963 | PDB |
| 8SYN | EM | 294 A | A | 1-963 | PDB |
| 8SYO | EM | 294 A | A | 1-963 | PDB |
| AF-Q7Z3J2-F1 | Predicted | AlphaFoldDB |
692 variants for Q7Z3J2
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs1972596669 RCV001271087 |
277 | C>missing | Ritscher-Schinzel syndrome 3 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001271086 VAR_085197 rs747119819 CA394959265 |
830 | A>T | Variant assessed as Somatic; impact. Ritscher-Schinzel syndrome 3 RTSC3; does not interact with VPS29 [NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs764633066 CA7935902 |
2 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA7935906 rs367897965 |
3 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA394959703 TCGA novel rs1211718914 |
4 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen gnomAD NCI-TCGA |
|
CA7935909 rs747073011 |
5 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394959715 rs1445215097 |
5 | P>L | No |
ClinGen TOPMed |
|
|
rs936227605 CA278795769 |
6 | W>R | No |
ClinGen TOPMed |
|
|
CA394934037 rs1412002740 |
8 | S>P | No |
ClinGen gnomAD |
|
|
CA394934095 rs1171296636 |
9 | R>K | No |
ClinGen gnomAD |
|
|
rs753813652 CA7935930 |
10 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs1343191778 CA394934128 |
10 | N>S | No |
ClinGen TOPMed |
|
|
CA394934185 rs1360173163 |
12 | N>S | No |
ClinGen gnomAD |
|
|
CA394934315 rs1414819863 |
15 | A>V | No |
ClinGen gnomAD |
|
|
CA394934408 rs1465827134 |
18 | A>V | No |
ClinGen gnomAD |
|
|
CA7935931 rs757124401 |
21 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs778699468 CA7935932 |
21 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778699468 CA7935933 |
21 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771763824 CA7935934 |
25 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs751533830 CA7935937 |
29 | F>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1018659631 CA278751740 |
29 | F>V | No |
ClinGen Ensembl |
|
|
CA7935939 rs762433487 |
31 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA7935938 rs775946795 |
31 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
VAR_037230 CA278751757 rs17854969 |
32 | Y>C | No |
ClinGen UniProt Ensembl dbSNP |
|
|
CA7935940 rs770385859 |
33 | H>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394934724 rs770385859 |
33 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA394934769 rs1193014452 |
34 | P>L | No |
ClinGen gnomAD |
|
|
rs1193014452 CA394934765 |
34 | P>R | No |
ClinGen gnomAD |
|
|
CA394934814 rs1278889789 |
37 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs773753882 CA7935941 |
38 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA278753580 rs919102879 |
42 | E>G | No |
ClinGen TOPMed |
|
|
CA394936785 rs1597310375 |
44 | K>N | No |
ClinGen Ensembl |
|
| TCGA novel | 44 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7935976 rs747715306 |
44 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs755678441 CA7935977 |
46 | K>* | No |
ClinGen ExAC |
|
|
rs1423230726 CA394936805 |
46 | K>T | No |
ClinGen TOPMed |
|
|
CA278753589 rs938489146 |
47 | K>T | No |
ClinGen TOPMed gnomAD |
|
|
CA7935980 rs749822818 |
48 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA7935979 rs749822818 |
48 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA7935982 rs746186181 |
50 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA7935981 rs774809331 |
50 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1244001861 CA394936935 |
54 | T>A | No |
ClinGen TOPMed |
|
|
CA7935983 rs772383799 |
55 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs1057422420 CA278753615 |
56 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
CA394936963 rs1336072941 |
57 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
CA394936999 rs1247688041 |
63 | S>N | No |
ClinGen gnomAD |
|
|
CA7935988 rs764172168 |
64 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394937008 rs766144664 |
65 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA7935991 rs766144664 |
65 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA394937017 rs1186641386 |
66 | V>G | No |
ClinGen gnomAD |
|
|
rs1597310571 CA394937021 |
67 | D>A | No |
ClinGen Ensembl |
|
|
CA7935993 rs554713753 |
68 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1567387198 CA394937032 |
69 | L>V | No |
ClinGen Ensembl |
|
|
rs755766433 CA7935996 |
70 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs1372283652 CA394937044 |
71 | S>G | No |
ClinGen gnomAD |
|
|
CA7935998 rs748706506 |
72 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7935999 rs757822505 |
73 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA7936001 rs746313792 |
74 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA278753653 rs938526744 |
75 | G>R | No |
ClinGen gnomAD |
|
| TCGA novel | 75 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA394937070 rs938526744 |
75 | G>W | No |
ClinGen gnomAD |
|
|
rs1398305707 CA394937082 |
76 | T>I | No |
ClinGen gnomAD |
|
|
CA394937089 rs1597310652 |
77 | D>A | No |
ClinGen Ensembl |
|
|
rs1326159434 CA394937097 |
78 | P>S | No |
ClinGen gnomAD |
|
|
CA394937112 rs1209766606 |
80 | S>T | No |
ClinGen gnomAD |
|
|
rs747254310 CA7936004 |
84 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA7936005 rs768830249 |
86 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs1428854996 CA394937174 |
87 | D>A | No |
ClinGen gnomAD |
|
|
CA394937176 rs1428854996 |
87 | D>G | No |
ClinGen gnomAD |
|
|
rs1162711637 CA394937182 |
88 | P>S | No |
ClinGen TOPMed |
|
|
rs370569405 CA7936008 |
89 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs1385988072 CA394937192 |
89 | A>V | No |
ClinGen TOPMed |
|
|
rs1452799898 CA394937199 |
90 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1452799898 CA394937200 |
90 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1440644280 CA394938739 |
96 | D>E | No |
ClinGen gnomAD |
|
|
rs1345844148 CA394938732 |
96 | D>G | No |
ClinGen TOPMed |
|
|
CA7936027 rs139739334 |
97 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs139739334 CA7936028 |
97 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA394938775 rs1221764557 |
98 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
CA7936029 rs143649089 |
98 | S>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA394938763 rs143649089 |
98 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs570834372 CA7936030 |
102 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA7936031 rs534959158 |
102 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs926517177 CA278755094 |
106 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs763894705 CA7936034 |
109 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs147199562 CA278755095 |
109 | V>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs147199562 CA7936033 |
109 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA394938893 rs1407535692 |
111 | G>V | No |
ClinGen gnomAD |
|
|
rs370715531 CA7936036 |
112 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7936038 rs749909431 |
113 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA7936039 rs758948904 |
115 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1438330323 CA394938925 |
116 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs780519985 CA7936040 |
117 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA394938936 rs1461416861 |
118 | T>A | No |
ClinGen gnomAD |
|
|
rs751981247 CA7936041 |
118 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7936042 rs373505689 |
119 | N>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1297260771 CA394938960 |
120 | K>E | No |
ClinGen gnomAD |
|
|
rs1350510828 CA394938970 |
120 | K>I | No |
ClinGen gnomAD |
|
|
CA394938982 rs748328502 |
121 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748328502 CA7936044 |
121 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs140487282 CA7936043 |
121 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA7936045 rs756307949 |
122 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs375466958 CA7936046 |
125 | L>F | No |
ClinGen ESP ExAC gnomAD |
|
|
CA278755138 rs1008986629 |
127 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
CA394939075 rs1008986629 |
127 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs199767367 CA7936048 |
127 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772184499 CA7936049 |
128 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7936050 rs775554738 |
129 | T>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA394939146 rs1180983930 |
130 | T>A | No |
ClinGen TOPMed |
|
|
rs1184474193 CA394939168 |
131 | T>A | No |
ClinGen gnomAD |
|
|
CA278755154 rs989162977 |
132 | E>D | No |
ClinGen gnomAD |
|
|
CA7936052 rs144556424 |
132 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs932947259 CA278755159 |
135 | S>P | No |
ClinGen Ensembl |
|
|
CA394940639 rs1453165254 |
137 | N>S | No |
ClinGen TOPMed |
|
|
CA7936073 rs768597941 |
140 | M>L | No |
ClinGen ExAC gnomAD |
|
|
CA7936074 rs776331654 |
141 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs1484180810 CA394942578 |
145 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA7936076 rs769395184 |
145 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs745436890 CA7936129 |
146 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA278758033 rs756057334 |
146 | K>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA7936130 rs771613779 |
147 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 148 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7936131 rs774803806 |
150 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA394942742 rs1384523262 |
152 | L>F | No |
ClinGen TOPMed |
|
|
CA394942758 rs1175425151 |
153 | A>V | No |
ClinGen gnomAD |
|
|
rs1179274720 CA394942780 |
154 | M>I | No |
ClinGen gnomAD |
|
|
CA7936134 rs777185457 |
154 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 156 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs371462894 CA7936135 |
156 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1388285068 CA394942840 |
157 | K>T | No |
ClinGen gnomAD |
|
|
CA7936136 rs765625438 |
158 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs763030453 CA7936138 |
159 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7936137 rs750664367 |
159 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs766499962 CA7936139 |
160 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA278758104 rs779887361 |
161 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs949404609 CA278758103 |
161 | R>W | No |
ClinGen TOPMed |
|
|
rs1046513680 CA278758105 |
163 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA394942985 rs1236724047 |
164 | E>G | No |
ClinGen gnomAD |
|
|
rs1267452445 CA394943028 |
166 | D>G | No |
ClinGen gnomAD |
|
|
rs1162995619 CA394943047 |
167 | D>G | No |
ClinGen TOPMed |
|
|
rs1171783887 CA394943108 |
170 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1171783887 CA394943111 |
170 | E>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1489480931 CA394945023 |
171 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA394945072 rs1180063304 |
172 | S>C | No |
ClinGen gnomAD |
|
|
rs1251235578 CA394945137 |
174 | K>R | No |
ClinGen gnomAD |
|
|
CA7936156 rs766477004 |
176 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA278759234 rs919021936 |
178 | N>S | No |
ClinGen gnomAD |
|
|
rs984894396 CA278759243 |
183 | D>H | No |
ClinGen Ensembl |
|
|
rs375711713 CA394945458 |
185 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs375711713 CA7936159 |
185 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs7206637 CA278759247 VAR_037231 |
186 | N>I | No |
ClinGen UniProt Ensembl dbSNP |
|
|
rs1351230190 CA394945513 |
186 | N>K | No |
ClinGen gnomAD |
|
|
CA394945525 rs1427481009 |
187 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1306861368 CA394945533 |
187 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs757126398 CA7936161 |
190 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA7936162 rs765037634 |
191 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs150962264 CA278759255 |
194 | S>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs150962264 CA7936164 |
194 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1045344629 CA278759262 |
196 | K>Q | No |
ClinGen Ensembl |
|
|
CA394945920 rs1274006052 |
201 | S>L | No |
ClinGen gnomAD |
|
|
CA394945932 rs754543122 |
202 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 202 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA394946022 rs1236266625 |
207 | A>T | No |
ClinGen gnomAD |
|
|
CA278759274 rs926827762 |
209 | K>I | No |
ClinGen Ensembl |
|
|
rs780796150 CA7936168 |
211 | V>A | No |
ClinGen ExAC |
|
|
rs1370342369 CA394950915 |
216 | K>E | No |
ClinGen gnomAD |
|
|
rs777269765 CA7936218 |
217 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777269765 CA394950956 |
217 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1458448545 CA394950959 |
218 | L>F | No |
ClinGen gnomAD |
|
|
CA7936219 rs200709240 |
221 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA278764396 rs918367966 |
222 | S>I | No |
ClinGen gnomAD |
|
|
rs1252623777 CA394951070 |
222 | S>R | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 225 | Q>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs749701376 CA278764404 |
229 | S>N | No |
ClinGen Ensembl |
|
|
CA7936222 rs746210321 |
230 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA7936225 rs747168492 |
235 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs762833607 CA7936228 |
236 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA7936229 rs770873864 |
237 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774334067 CA7936230 |
238 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA278764470 rs551468979 |
238 | L>P | No |
ClinGen Ensembl |
|
|
CA7936231 rs759388720 |
239 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA394951644 rs1294980676 |
240 | T>I | No |
ClinGen gnomAD |
|
|
CA7936232 rs534656271 |
240 | T>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1297098370 CA394954654 |
243 | K>T | No |
ClinGen gnomAD |
|
|
CA394954693 rs1597348001 |
244 | L>V | No |
ClinGen Ensembl |
|
|
CA394954748 rs774423993 |
246 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1256541871 CA394954757 |
247 | E>K | No |
ClinGen gnomAD |
|
|
rs745730029 CA7936249 |
248 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA7936250 rs772004595 |
251 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs775374876 CA7936251 |
252 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs1267318453 CA394954933 |
252 | M>V | No |
ClinGen gnomAD |
|
|
CA7936252 rs760275271 |
253 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA7936253 rs763770250 |
257 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7936254 rs776063425 |
257 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA7936255 rs776063425 |
257 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394955263 rs764662565 CA394955247 |
258 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7936257 rs551723787 |
259 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs1388455880 CA394955340 |
261 | P>S | No |
ClinGen gnomAD |
|
|
rs751931237 CA7936279 |
264 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs1006029866 CA278778271 |
264 | F>V | No |
ClinGen TOPMed |
|
|
rs367846668 CA7936280 |
265 | S>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA278778298 rs1011499880 |
266 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs140763117 CA7936281 |
267 | E>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7936282 rs140763117 |
267 | E>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7936284 rs778028900 |
269 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA394957703 rs3208062 |
270 | N>D | No |
ClinGen gnomAD |
|
|
CA394957709 rs1244418168 |
270 | N>S | No |
ClinGen gnomAD |
|
|
CA394957740 rs1490865852 |
272 | T>A | No |
ClinGen gnomAD |
|
|
rs3208064 CA278778353 |
272 | T>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7936285 rs3208064 |
272 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA278778364 rs752615438 |
273 | A>T | No |
ClinGen Ensembl |
|
|
CA7936287 rs780037763 |
274 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
CA7936288 rs746856456 |
275 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1422809750 CA394957829 |
285 | A>T | No |
ClinGen gnomAD |
|
|
CA7936290 rs768511694 |
289 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs780802972 CA7936291 |
290 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394957879 rs1306913015 |
292 | P>L | No |
ClinGen gnomAD |
|
|
CA394957888 rs1359698673 |
294 | F>L | No |
ClinGen TOPMed |
|
|
rs1358315783 CA621241160 |
295 | Y>* | No |
ClinGen gnomAD |
|
|
rs1019626842 CA278778853 |
296 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs941663813 CA278778861 |
297 | E>A | No |
ClinGen TOPMed gnomAD |
|
|
CA394957927 rs146858083 |
298 | A>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA7936312 rs146858083 |
298 | A>T | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1443938805 CA394957942 |
300 | I>M | No |
ClinGen TOPMed |
|
|
CA7936314 rs772375233 |
300 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7936315 rs754833008 |
303 | C>G | No |
ClinGen ExAC gnomAD |
|
|
rs1383379473 CA394957964 |
304 | N>D | No |
ClinGen TOPMed |
|
|
rs747918715 CA7936317 |
304 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs549103764 CA7936319 |
309 | K>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs140659275 CA7936320 |
310 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs368538814 CA7936346 |
314 | E>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371394198 CA7936347 |
314 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 314 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1180186592 CA394958492 |
316 | L>R | No |
ClinGen Ensembl |
|
|
rs1178601579 CA394958486 |
316 | L>V | No |
ClinGen TOPMed |
|
|
rs1365036798 CA394958502 |
317 | P>L | No |
ClinGen gnomAD |
|
|
CA394958500 rs1365036798 |
317 | P>R | No |
ClinGen gnomAD |
|
|
rs765357142 CA7936349 |
317 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs199726251 CA7936351 |
318 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7936350 rs773402984 |
318 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA278780080 rs905538658 |
320 | T>R | No |
ClinGen TOPMed |
|
|
rs1280560024 CA394958538 |
321 | C>R | No |
ClinGen gnomAD |
|
|
rs1226327402 CA394958576 |
324 | R>G | No |
ClinGen gnomAD |
|
|
CA394958586 rs1301740068 |
324 | R>S | No |
ClinGen gnomAD |
|
|
rs927958511 CA278780088 |
327 | G>R | No |
ClinGen gnomAD |
|
|
CA278780103 rs939381191 |
328 | D>A | No |
ClinGen gnomAD |
|
|
CA394958635 rs1567420502 |
329 | P>T | No |
ClinGen Ensembl |
|
|
CA278780115 rs988165271 |
330 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs372253776 CA7936358 |
332 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs757859268 CA7936360 |
335 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs375259349 CA7936361 |
336 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1425420300 CA394958736 |
336 | R>H | No |
ClinGen gnomAD |
|
|
rs747551987 CA7936362 |
337 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 339 | L>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs766562519 CA394958821 |
341 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394958829 rs372342574 |
341 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs372342574 CA7936364 |
341 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs766562519 CA7936363 |
341 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
| rs200642096 | 347 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
| rs1375262931 | 349 | H>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
| rs1342789088 | 355 | N>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| rs200808620 | 364 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
| rs749175686 | 372 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 380 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 380 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 390 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| rs751663302 | 393 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs928754011 CA278789796 |
409 | A>G | No |
ClinGen Ensembl |
|
|
rs764213344 CA7936485 |
409 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA7936488 rs779947944 |
412 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754691203 CA7936490 |
413 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs934852174 CA278789813 |
415 | M>L | No |
ClinGen gnomAD |
|
|
rs934852174 CA394963020 |
415 | M>V | No |
ClinGen gnomAD |
|
|
CA394963036 rs1279807575 |
417 | R>G | No |
ClinGen gnomAD |
|
|
CA7936491 rs780826333 |
417 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs780826333 CA394963039 |
417 | R>M | No |
ClinGen ExAC gnomAD |
|
|
rs1597373530 CA394963045 |
418 | C>Y | No |
ClinGen Ensembl |
|
|
rs769314468 CA7936493 |
419 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394963085 rs1186511914 |
424 | N>D | No |
ClinGen TOPMed |
|
| TCGA novel | 425 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA394963115 rs1312317091 |
426 | L>F | No |
ClinGen TOPMed |
|
| TCGA novel | 431 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs746441101 CA278790493 |
432 | M>I | No |
ClinGen Ensembl |
|
|
CA7936511 rs143145061 |
436 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs780912488 CA7936510 |
436 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 438 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1567436374 CA394963191 |
438 | E>G | No |
ClinGen Ensembl |
|
|
CA394963187 rs1242561999 |
438 | E>K | No |
ClinGen gnomAD |
|
|
CA278790504 rs775764923 |
439 | F>V | No |
ClinGen TOPMed |
|
|
CA7936514 rs147480246 |
440 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs147513363 CA394963209 |
441 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs147513363 CA7936516 |
441 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1402916739 CA394963219 |
443 | R>G | No |
ClinGen gnomAD |
|
|
rs1467857193 CA394963221 |
443 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
CA278790524 rs904500774 |
444 | S>T | No |
ClinGen Ensembl |
|
|
CA278790525 rs1004973880 |
445 | M>V | No |
ClinGen TOPMed |
|
|
rs112450522 CA278790526 |
447 | F>L | No |
ClinGen Ensembl |
|
|
rs747803384 CA7936517 |
448 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1406407995 CA394963267 |
450 | M>V | No |
ClinGen gnomAD |
|
|
rs1024146632 CA278790529 |
451 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1315680565 CA394963285 |
452 | K>Q | No |
ClinGen gnomAD |
|
|
rs746321817 CA7936518 |
453 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7936519 rs150801332 |
454 | C>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7936520 rs775959528 |
454 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394963326 rs1321184382 |
455 | D>H | No |
ClinGen gnomAD |
|
|
rs1221873509 CA394963403 |
461 | K>R | No |
ClinGen gnomAD |
|
|
rs1032781974 CA278755108 |
464 | L>R | No |
ClinGen Ensembl |
|
| TCGA novel | 464 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs867148990 CA278755109 |
466 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
rs567680668 CA7936541 |
466 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA394939170 rs1419742370 |
467 | S>* | No |
ClinGen gnomAD |
|
|
CA394939165 rs1278197299 |
467 | S>P | No |
ClinGen gnomAD |
|
|
rs200209817 CA278755112 |
468 | L>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA7936543 rs776730635 |
471 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs376930432 CA7936544 |
471 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1235757506 CA394939314 |
476 | D>N | No |
ClinGen gnomAD |
|
|
rs773243489 CA7936546 |
478 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1567437316 CA394939408 |
481 | D>E | No |
ClinGen Ensembl |
|
|
rs774107773 CA278755125 |
482 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
CA7936547 rs79131945 |
482 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7936548 rs767425093 |
483 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs752559765 CA7936549 |
484 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA7936550 rs760395771 |
485 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA278755139 rs936975418 |
487 | N>H | No |
ClinGen TOPMed gnomAD |
|
|
CA7936553 rs370460906 |
487 | N>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs778328384 CA7936554 |
487 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA7936552 rs370460906 |
487 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1206685849 CA394939520 |
488 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA394939529 rs1250566359 |
489 | A>T | No |
ClinGen gnomAD |
|
| TCGA novel | 491 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7936555 rs770547092 |
492 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394939643 rs1382862075 |
494 | T>P | No |
ClinGen gnomAD |
|
|
CA7936558 rs149884417 |
498 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1351584165 CA394939770 |
499 | P>L | No |
ClinGen gnomAD |
|
| TCGA novel | 502 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA278755539 rs546049404 |
503 | I>V | No |
ClinGen 1000Genomes |
|
|
rs1333652340 CA394940036 |
505 | C>W | No |
ClinGen gnomAD |
|
|
rs17854970 VAR_037232 CA278755542 |
506 | A>V | No |
ClinGen UniProt Ensembl dbSNP |
|
|
CA394940072 rs1305023091 |
507 | E>D | No |
ClinGen TOPMed |
|
|
rs764971165 CA7936586 |
507 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7936590 rs752143268 |
510 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA7936589 rs370497822 |
510 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370497822 CA7936588 |
510 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA394940165 rs1567438418 |
513 | T>S | No |
ClinGen Ensembl |
|
|
rs375230902 CA278755558 |
515 | K>E | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA394940210 rs1597376679 |
515 | K>R | No |
ClinGen Ensembl |
|
|
CA7936591 rs755476589 |
516 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1338140815 CA394940243 |
517 | F>V | No |
ClinGen gnomAD |
|
|
rs912278861 CA278755563 |
518 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
CA394940261 rs1567438449 |
518 | T>S | No |
ClinGen Ensembl |
|
|
CA394941857 rs1211211460 |
520 | R>* | No |
ClinGen TOPMed |
|
|
CA394941861 rs1477791169 |
520 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA278756915 rs987827600 |
521 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA278756930 rs759624038 |
522 | V>G | No |
ClinGen Ensembl |
|
|
CA7936614 rs757440621 |
525 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394942009 rs1311304668 |
528 | D>G | No |
ClinGen TOPMed |
|
|
rs973431594 CA278756934 |
530 | I>V | No |
ClinGen TOPMed |
|
|
CA7936615 rs779014329 |
532 | H>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779014329 CA394942072 |
532 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs368554083 CA7936617 |
533 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs745950100 CA7936616 |
533 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7936619 rs776127420 |
534 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776127420 CA7936618 |
534 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7936620 rs769742683 |
536 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA394942196 rs1436699678 |
537 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
CA7936621 rs139805019 |
537 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs770690088 CA7936623 |
540 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA7936624 rs539221695 |
541 | D>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 542 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs759088279 CA7936625 |
543 | Y>N | No |
ClinGen ExAC gnomAD |
|
|
CA7936626 rs143313550 |
544 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA394942330 rs1325675604 |
544 | P>S | No |
ClinGen gnomAD |
|
| TCGA novel | 545 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA394942343 rs1182644220 |
545 | Q>R | No |
ClinGen TOPMed |
|
|
rs1453624877 CA394943601 |
546 | L>R | No |
ClinGen TOPMed |
|
|
CA7936650 rs764572301 |
547 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs754269775 CA7936651 |
549 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7936652 rs762170941 |
551 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA394943725 rs1467459628 |
556 | H>Y | No |
ClinGen TOPMed |
|
|
CA278759100 rs377529296 |
558 | H>R | No |
ClinGen ESP |
|
|
CA394943757 rs1464735109 |
558 | H>Y | No |
ClinGen gnomAD |
|
|
rs765468813 CA7936653 |
559 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs750686809 CA7936654 |
561 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758517616 CA7936655 |
562 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs773427114 CA7936672 |
569 | F>C | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 569 | F>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7936671 rs374146026 |
569 | F>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs773427114 CA7936673 |
569 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs766501575 CA7936674 |
571 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 572 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1284479285 CA394944308 |
572 | F>V | No |
ClinGen gnomAD |
|
|
rs1194845080 CA394944347 |
574 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA7936678 rs753859631 |
575 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394944355 rs1265807053 |
575 | M>V | No |
ClinGen gnomAD |
|
|
CA394944449 rs1317639866 |
578 | K>R | No |
ClinGen TOPMed |
|
|
CA7936681 rs745637106 |
579 | E>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 579 | E>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA394944469 rs1359818642 |
579 | E>V | No |
ClinGen gnomAD |
|
|
rs758137585 CA7936682 |
580 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1299748628 CA394944518 |
581 | V>A | No |
ClinGen gnomAD |
|
|
rs1232374933 CA394944517 |
581 | V>L | No |
ClinGen gnomAD |
|
|
rs144364706 CA394944533 |
582 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7936684 rs144364706 |
582 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7936683 rs779687445 |
582 | R>W | Variant assessed as Somatic; 4.619e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1235501319 CA394944623 |
587 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA7936685 rs768183901 |
588 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs1353540314 CA394944664 |
589 | I>L | No |
ClinGen gnomAD |
|
|
rs1422384803 CA394944704 |
591 | D>N | No |
ClinGen TOPMed |
|
|
CA394944729 rs1288547923 |
592 | A>T | No |
ClinGen gnomAD |
|
| TCGA novel | 597 | Q>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1165141846 CA394946440 |
598 | Q>E | No |
ClinGen gnomAD |
|
|
rs754601372 CA7936703 |
601 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs151122062 CA7936704 |
604 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7936707 rs557240840 |
606 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1403537109 CA394946683 |
607 | L>M | No |
ClinGen TOPMed |
|
|
CA7936708 rs749752363 |
610 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs749752363 CA394946741 |
610 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs897570872 CA278761142 |
612 | H>L | No |
ClinGen TOPMed |
|
|
rs897570872 CA394946800 |
612 | H>R | No |
ClinGen TOPMed |
|
|
rs369150913 CA278761148 |
613 | V>I | No |
ClinGen ESP |
|
|
rs867953073 CA278761153 |
617 | M>R | No |
ClinGen Ensembl |
|
|
CA7936710 rs774828821 |
618 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs759890256 CA7936711 |
620 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7936712 rs772414410 |
621 | V>E | No |
ClinGen ExAC |
|
|
rs777294479 CA7936725 |
622 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs150266526 CA7936713 |
622 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA394947855 rs1453045413 |
624 | L>F | No |
ClinGen TOPMed |
|
|
CA7936727 rs749801300 |
625 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1311068901 CA394947908 |
627 | E>G | No |
ClinGen gnomAD |
|
|
rs771544834 CA7936728 |
628 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA278762070 rs200092938 |
629 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA278762097 rs1052380537 |
631 | R>G | No |
ClinGen Ensembl |
|
|
CA7936731 rs746235591 |
631 | R>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7936732 rs138743623 |
632 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1478242830 CA394948047 COSM1609002 |
633 | L>V | liver [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA7936733 rs535447833 |
634 | S>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs765994578 CA278762109 |
634 | S>T | No |
ClinGen Ensembl |
|
|
CA7936734 rs182792252 |
636 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs1279261421 CA394948111 |
637 | I>L | No |
ClinGen TOPMed |
|
|
CA7936736 rs776748196 |
639 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs762934765 CA7936737 |
641 | I>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 642 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA394948303 rs1232010023 |
643 | M>I | No |
ClinGen TOPMed |
|
|
CA7936760 rs759425490 |
644 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs775335412 CA7936762 |
645 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA7936761 rs767252970 |
645 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA7936764 rs141537550 |
647 | G>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs373070886 CA7936765 |
648 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs373070886 CA394949282 |
648 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs756841199 CA7936766 |
648 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs750999584 CA7936768 |
649 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1405550882 CA394949379 |
655 | S>C | No |
ClinGen gnomAD |
|
|
rs879046021 CA278763706 |
655 | S>N | No |
ClinGen Ensembl |
|
|
CA394949414 rs1390911479 |
657 | Y>F | No |
ClinGen TOPMed |
|
|
CA7936769 rs758944543 |
659 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1183042833 CA394949439 |
659 | E>V | No |
ClinGen TOPMed |
|
|
rs1276642373 CA394949453 |
660 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs780338929 CA7936770 |
662 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA394949479 rs1331521733 |
663 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA7936772 rs755230447 |
665 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs147063690 CA7936773 |
666 | N>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs748317428 CA7936774 |
666 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394949563 rs769889652 |
669 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201717952 CA278763740 |
669 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs769889652 CA7936775 |
669 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394949617 rs1198013085 |
673 | Q>H | No |
ClinGen gnomAD |
|
|
CA7936779 rs772036555 |
676 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745857160 CA7936778 |
676 | H>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 689 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7936828 rs537660267 |
704 | C>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394951038 rs764394530 |
706 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7936829 rs764394530 |
706 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA7936830 rs754125313 |
706 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA394951077 rs1161001102 |
707 | Y>C | No |
ClinGen gnomAD |
|
|
CA7936831 rs757394375 |
708 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA394951097 rs1456552992 |
709 | F>V | No |
ClinGen TOPMed gnomAD |
|
|
CA278765409 rs144534439 |
710 | I>V | No |
ClinGen ESP TOPMed |
|
|
rs7184272 CA7936833 |
712 | I>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7936832 rs765410133 |
712 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA394951179 rs1567457053 |
713 | P>H | No |
ClinGen Ensembl |
|
|
CA7936834 rs758482660 |
716 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1393536554 CA394951203 |
716 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs758482660 CA7936835 |
716 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs544387448 CA7936837 |
717 | G>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs544387448 CA394951226 |
717 | G>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA394951283 rs930929987 |
719 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs777680155 CA7936838 |
720 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs200153962 CA7936839 |
721 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7936840 rs770474820 |
721 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA278765441 rs770474820 |
721 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7936842 rs141806447 |
723 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1256932037 CA394951377 |
724 | L>F | No |
ClinGen gnomAD |
|
|
CA7936846 rs139837931 |
727 | H>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7936845 rs139837931 |
727 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7936847 rs143122530 |
730 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs906315435 CA278765463 |
732 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA394951564 rs906315435 |
732 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1168599151 CA394951681 |
736 | Q>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1354054611 CA394951725 |
737 | C>Y | No |
ClinGen gnomAD |
|
|
rs1462592107 CA394951747 |
738 | L>F | No |
ClinGen gnomAD |
|
|
CA7936851 rs533190713 |
741 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1362238723 CA394955397 |
746 | K>E | No |
ClinGen gnomAD |
|
|
rs771602358 CA7936864 |
748 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs771602358 CA7936863 |
748 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA7936865 rs202109632 |
749 | I>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781713958 CA7936866 |
750 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777122821 CA7936867 |
750 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7936868 rs374979210 |
751 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA394955567 rs1241678103 |
752 | V>L | No |
ClinGen gnomAD |
|
|
rs968866368 CA278771623 |
753 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA7936869 rs149898838 |
753 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA394955623 rs968866368 |
753 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA7936871 rs763233007 |
755 | V>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 757 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA278771707 CA278771701 rs976985723 |
758 | M>I | No |
ClinGen TOPMed |
|
|
rs766615041 CA7936872 |
759 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA394955809 rs1397450811 |
760 | N>T | No |
ClinGen gnomAD |
|
|
CA394955831 rs1416714232 |
761 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1294655039 CA394955866 |
763 | G>R | No |
ClinGen TOPMed |
|
|
CA394955944 CA278771722 rs772933612 |
765 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
rs760760852 CA7936875 |
766 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA278771723 rs867130716 |
766 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA7936876 rs763941801 |
768 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs757025573 CA7936878 |
770 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs762761848 CA278771771 |
772 | L>F | No |
ClinGen Ensembl |
|
|
rs750120754 CA7936880 |
773 | L>V | No |
ClinGen ExAC |
|
|
CA278771782 rs908946876 |
777 | C>Y | No |
ClinGen Ensembl |
|
|
CA278771787 rs912534064 |
779 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs779600815 CA7936882 |
780 | F>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394956783 rs1218260142 |
782 | T>A | No |
ClinGen gnomAD |
|
|
rs942743188 CA278771788 |
783 | L>V | No |
ClinGen TOPMed |
|
|
rs759507434 CA7936885 |
785 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394956850 rs748644296 |
786 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7936886 rs748644296 |
786 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7936887 rs574948701 |
787 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA394956867 rs574948701 |
787 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA394956862 rs1255365249 |
787 | P>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
| TCGA novel | 790 | P>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7936910 rs368862200 |
792 | H>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA394958800 rs1440124584 |
794 | V>I | No |
ClinGen gnomAD |
|
|
CA7936911 rs772085256 |
799 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775621377 CA7936912 |
799 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7936913 rs761719426 |
801 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA394958872 rs1371004663 |
803 | N>D | No |
ClinGen gnomAD |
|
|
rs147028064 CA7936914 |
803 | N>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs147028064 CA7936915 |
803 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7936916 rs373111547 |
804 | V>M | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1421562908 CA394958922 |
807 | D>H | No |
ClinGen gnomAD |
|
|
CA394958949 rs1381033299 |
808 | Y>C | No |
ClinGen TOPMed |
|
|
rs1005091420 CA278779482 |
809 | T>I | No |
ClinGen TOPMed |
|
|
CA7936918 rs751248795 |
810 | W>R | No |
ClinGen ExAC gnomAD |
|
|
CA278779493 rs928520718 |
811 | E>Q | No |
ClinGen TOPMed |
|
|
rs1375799321 CA394959019 |
813 | N>D | No |
ClinGen gnomAD |
|
|
CA278779495 rs963603115 |
814 | S>G | No |
ClinGen Ensembl |
|
|
CA278779496 rs1001442165 |
814 | S>I | No |
ClinGen TOPMed |
|
|
rs142464486 CA7936920 |
815 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs752246902 CA7936921 |
815 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA7936922 rs370516328 |
819 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7936923 rs778437325 |
819 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA278779542 rs150215473 |
820 | I>M | No |
ClinGen ESP |
|
|
rs749765639 CA7936924 |
820 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA394959146 rs1478047376 |
821 | Y>C | No |
ClinGen TOPMed |
|
|
rs1280276939 CA394959153 |
822 | T>A | No |
ClinGen gnomAD |
|
|
CA394959152 rs1280276939 |
822 | T>P | No |
ClinGen gnomAD |
|
|
rs1448651322 CA394959190 |
824 | V>A | No |
ClinGen TOPMed |
|
|
CA7936926 rs531081300 |
824 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs531081300 CA394959182 |
824 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs967500400 CA278779584 |
826 | H>R | No |
ClinGen Ensembl |
|
|
CA394959251 rs1193253039 |
829 | S>A | No |
ClinGen gnomAD |
|
|
rs747119819 CA7936930 |
830 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747119819 CA394959262 |
830 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7936931 rs768668578 |
831 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7936932 rs773161859 |
832 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs1436284769 CA394959315 |
833 | Q>R | No |
ClinGen gnomAD |
|
|
rs192970606 CA7936934 |
835 | T>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA7936933 rs762844205 |
835 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs1597432368 CA394959402 |
839 | H>Y | No |
ClinGen Ensembl |
|
|
CA278779604 rs899999671 |
840 | I>M | No |
ClinGen TOPMed |
|
|
rs1328236312 CA394959425 |
840 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs759176989 CA7936936 |
841 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1438828008 CA394959434 |
841 | D>G | No |
ClinGen gnomAD |
|
| TCGA novel | 843 | V>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1164270968 CA394960149 |
843 | V>A | No |
ClinGen gnomAD |
|
|
CA394960150 rs1164270968 |
843 | V>G | No |
ClinGen gnomAD |
|
|
CA394959453 rs1349237416 |
843 | V>M | No |
ClinGen gnomAD |
|
|
CA7936957 rs763746697 |
846 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394960175 rs1597442369 |
847 | D>A | No |
ClinGen Ensembl |
|
|
CA7936958 rs753385870 |
847 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1396420000 CA394960189 |
849 | L>F | No |
ClinGen gnomAD |
|
|
rs1290665975 CA394960197 |
850 | Y>C | No |
ClinGen gnomAD |
|
|
CA7936961 rs529462508 |
851 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA394960203 rs1567492656 |
851 | G>V | No |
ClinGen Ensembl |
|
|
CA7936960 rs529462508 |
851 | G>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7936963 rs138740165 |
852 | G>A | No |
ClinGen ESP ExAC TOPMed |
|
|
CA7936964 rs138740165 |
852 | G>E | No |
ClinGen ESP ExAC TOPMed |
|
|
rs1183404997 CA394960212 |
853 | D>A | No |
ClinGen TOPMed |
|
|
CA394960209 rs1265194684 |
853 | D>N | No |
ClinGen gnomAD |
|
|
CA394960226 rs1567492693 |
855 | K>T | No |
ClinGen Ensembl |
|
|
CA7936966 rs751854721 |
856 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755174966 CA7936967 |
857 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1480957167 CA394960242 |
858 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs748229939 CA7936969 |
858 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA394960256 rs1316077141 |
860 | N>D | No |
ClinGen TOPMed |
|
|
CA7936971 CA394960268 rs373593167 |
861 | N>K | No |
ClinGen ESP ExAC gnomAD |
|
|
CA7936970 rs769807628 |
861 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| rs767894566 | 861 | N>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1187439430 CA394960269 |
862 | K>Q | No |
ClinGen gnomAD |
|
|
CA278785542 rs1012357738 |
863 | L>M | No |
ClinGen Ensembl |
|
|
CA7936972 rs745751478 |
863 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA394960286 rs1168510873 |
864 | C>* | No |
ClinGen gnomAD |
|
|
rs368058652 CA7936973 |
864 | C>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA394960287 rs1372999383 |
865 | E>K | No |
ClinGen gnomAD |
|
|
CA394960296 rs1477642398 |
866 | T>A | No |
ClinGen gnomAD |
|
|
CA7936974 rs141552703 |
866 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1597442589 CA394960300 |
867 | V>M | No |
ClinGen Ensembl |
|
|
rs982360844 CA278785573 |
868 | M>I | No |
ClinGen TOPMed |
|
|
rs776359572 CA7936978 |
869 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA278785574 rs776359572 |
869 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs955660825 CA278785588 |
870 | Q>* | No |
ClinGen TOPMed |
|
|
CA278785578 rs955660825 |
870 | Q>E | No |
ClinGen TOPMed |
|
|
rs761426241 CA7936979 |
870 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1463747424 CA394960327 |
871 | I>T | No |
ClinGen TOPMed |
|
|
CA7936980 rs764606900 |
872 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs750976302 CA7936981 |
873 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 876 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1293233927 CA394960389 |
880 | K>* | No |
ClinGen gnomAD |
|
|
rs766822911 CA7936983 |
880 | K>T | No |
ClinGen ExAC |
|
|
CA394960420 rs1485192699 |
882 | E>D | No |
ClinGen gnomAD |
|
|
CA394960411 rs1278139223 |
882 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs34342607 CA7937010 |
883 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7937011 rs754855735 |
883 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1323380489 CA394949684 |
885 | K>R | No |
ClinGen gnomAD |
|
|
CA7937012 rs377505002 |
886 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA278764125 rs866568029 |
886 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs747856441 CA7937013 |
888 | S>G | No |
ClinGen ExAC |
|
|
rs1263409854 CA394949741 |
889 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA7937017 rs770424103 |
891 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA394949906 rs1271401117 |
898 | I>N | No |
ClinGen gnomAD |
|
|
CA7937020 rs767918312 |
901 | H>L | No |
ClinGen ExAC gnomAD |
|
|
CA394949990 rs1222896247 |
901 | H>N | No |
ClinGen gnomAD |
|
|
rs775819135 CA7937021 |
902 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs150300279 CA7937022 |
905 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA278764172 rs200464246 |
905 | R>H | No |
ClinGen TOPMed |
|
|
CA394950117 rs200464246 |
905 | R>P | No |
ClinGen TOPMed |
|
|
CA7937024 rs764228537 |
907 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
| rs760572158 | 907 | N>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7937025 rs754037163 |
908 | K>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1325380092 CA394950193 |
910 | N>D | No |
ClinGen gnomAD |
|
|
rs1462455955 CA394950198 |
910 | N>K | No |
ClinGen TOPMed |
|
|
CA394950207 rs1263552142 |
911 | Q>H | No |
ClinGen TOPMed |
|
|
rs1352693861 CA394950211 |
912 | L>H | No |
ClinGen gnomAD |
|
|
CA394950223 rs1230505409 |
914 | V>A | No |
ClinGen gnomAD |
|
|
rs762878146 CA7937029 |
914 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7937030 rs781195621 |
915 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA7937031 rs142584344 |
916 | L>V | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA7937033 rs752436522 |
918 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7937034 rs755877113 |
920 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs759623970 CA278764256 |
920 | A>T | No |
ClinGen gnomAD |
|
|
CA394950262 rs1436639686 |
921 | Q>E | No |
ClinGen gnomAD |
|
|
rs1204244409 CA394950265 |
921 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA394950273 rs1484261466 |
922 | R>K | No |
ClinGen gnomAD |
|
|
rs922750409 CA394950287 |
924 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1416733828 CA394950284 |
924 | G>S | No |
ClinGen gnomAD |
|
|
CA278764283 rs922750409 |
924 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
CA394950299 rs1164565579 |
926 | A>S | No |
ClinGen gnomAD |
|
|
CA394950329 rs1451130929 |
930 | T>I | No |
ClinGen TOPMed |
|
|
CA394950335 rs1417277483 |
931 | M>I | No |
ClinGen gnomAD |
|
|
rs367816026 CA278764288 |
931 | M>T | No |
ClinGen ESP |
|
|
CA7937063 rs375668427 |
934 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7937066 rs762003912 |
936 | E>D | No |
ClinGen ExAC |
|
|
rs777035010 CA7937065 |
936 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA278764802 rs61738005 |
937 | Y>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7937067 rs139882380 |
937 | Y>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs763144416 CA7937069 |
938 | I>L | No |
ClinGen ExAC gnomAD |
|
|
CA7937070 rs189252663 |
939 | K>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs147961883 CA7937071 |
940 | K>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs760637895 CA7937072 |
942 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs753663155 CA7937074 |
943 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763852228 CA7937073 |
943 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA7937075 rs756980890 |
947 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7937076 rs764883481 |
949 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA7937078 rs757937591 |
951 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7937081 rs755500932 |
952 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA7937080 rs747522933 |
952 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA394951708 rs1269520145 |
953 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA394951750 rs1466776388 |
954 | A>V | No |
ClinGen gnomAD |
|
|
rs781482371 CA7937082 |
959 | L>M | No |
ClinGen ExAC |
|
|
rs369761590 CA7937083 |
960 | Q>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs770232382 CA7937084 |
961 | T>K | No |
ClinGen ExAC gnomAD |
|
|
CA7937085 rs140163660 |
962 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1362267910 CA394952038 |
963 | T>I | No |
ClinGen gnomAD |
|
| TCGA novel | 964 | T>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
1 associated diseases with Q7Z3J2
[MIM: 619135]: Ritscher-Schinzel syndrome 3 (RTSC3)
A form of Ritscher-Schinzel syndrome, a developmental malformation syndrome characterized by cerebellar brain malformations, congenital heart defects, and craniofacial abnormalities. RTSC3 is an autosomal recessive form. Affected individuals show cranio-cerebello-cardiac anomalies, coloboma, microphthalmia, chondrodysplasia punctata, complicated skeletal malformations, periventricular nodular heterotopia and proteinuria. {ECO:0000269|PubMed:31712251}. Note=The disease may be caused by variants affecting the gene represented in this entry.
Without disease ID
- A form of Ritscher-Schinzel syndrome, a developmental malformation syndrome characterized by cerebellar brain malformations, congenital heart defects, and craniofacial abnormalities. RTSC3 is an autosomal recessive form. Affected individuals show cranio-cerebello-cardiac anomalies, coloboma, microphthalmia, chondrodysplasia punctata, complicated skeletal malformations, periventricular nodular heterotopia and proteinuria. {ECO:0000269|PubMed:31712251}. Note=The disease may be caused by variants affecting the gene represented in this entry.
No regional properties for Q7Z3J2
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q7Z3J2 | |||
Functions
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| endosome | A vacuole to which materials ingested by endocytosis are delivered. |
| ficolin-1-rich granule membrane | The lipid bilayer surrounding a ficolin-1-rich granule. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| endocytic recycling | The directed movement of membrane-bounded vesicles from endosomes back to the plasma membrane, a trafficking pathway that promotes the recycling of internalized transmembrane proteins. |
| Golgi to plasma membrane transport | The directed movement of substances from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane, where they fuse and release their contents by exocytosis. |
| protein transport | The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAVFPWHSRN | RNYKAEFASC | RLEAVPLEFG | DYHPLKPITV | TESKTKKVNR | KGSTSSTSSS |
| 70 | 80 | 90 | 100 | 110 | 120 |
| SSSSVVDPLS | SVLDGTDPLS | MFAATADPAA | LAAAMDSSRR | KRDRDDNSVV | GSDFEPWTNK |
| 130 | 140 | 150 | 160 | 170 | 180 |
| RGEILARYTT | TEKLSINLFM | GSEKGKAGTA | TLAMSEKVRT | RLEELDDFEE | GSQKELLNLT |
| 190 | 200 | 210 | 220 | 230 | 240 |
| QQDYVNRIEE | LNQSLKDAWA | SDQKVKALKI | VIQCSKLLSD | TSVIQFYPSK | FVLITDILDT |
| 250 | 260 | 270 | 280 | 290 | 300 |
| FGKLVYERIF | SMCVDSRSVL | PDHFSPENAN | DTAKETCLNW | FFKIASIREL | IPRFYVEASI |
| 310 | 320 | 330 | 340 | 350 | 360 |
| LKCNKFLSKT | GISECLPRLT | CMIRGIGDPL | VSVYARAYLC | RVGMEVAPHL | KETLNKNFFD |
| 370 | 380 | 390 | 400 | 410 | 420 |
| FLLTFKQIHG | DTVQNQLVVQ | GVELPSYLPL | YPPAMDWIFQ | CISYHAPEAL | LTEMMERCKK |
| 430 | 440 | 450 | 460 | 470 | 480 |
| LGNNALLLNS | VMSAFRAEFI | ATRSMDFIGM | IKECDESGFP | KHLLFRSLGL | NLALADPPES |
| 490 | 500 | 510 | 520 | 530 | 540 |
| DRLQILNEAW | KVITKLKNPQ | DYINCAEVWV | EYTCKHFTKR | EVNTVLADVI | KHMTPDRAFE |
| 550 | 560 | 570 | 580 | 590 | 600 |
| DSYPQLQLII | KKVIAHFHDF | SVLFSVEKFL | PFLDMFQKES | VRVEVCKCIM | DAFIKHQQEP |
| 610 | 620 | 630 | 640 | 650 | 660 |
| TKDPVILNAL | LHVCKTMHDS | VNALTLEDEK | RMLSYLINGF | IKMVSFGRDF | EQQLSFYVES |
| 670 | 680 | 690 | 700 | 710 | 720 |
| RSMFCNLEPV | LVQLIHSVNR | LAMETRKVMK | GNHSRKTAAF | VRACVAYCFI | TIPSLAGIFT |
| 730 | 740 | 750 | 760 | 770 | 780 |
| RLNLYLHSGQ | VALANQCLSQ | ADAFFKAAIS | LVPEVPKMIN | IDGKMRPSES | FLLEFLCNFF |
| 790 | 800 | 810 | 820 | 830 | 840 |
| STLLIVPDHP | EHGVLFLVRE | LLNVIQDYTW | EDNSDEKIRI | YTCVLHLLSA | MSQETYLYHI |
| 850 | 860 | 870 | 880 | 890 | 900 |
| DKVDSNDSLY | GGDSKFLAEN | NKLCETVMAQ | ILEHLKTLAK | DEALKRQSSL | GLSFFNSILA |
| 910 | 920 | 930 | 940 | 950 | 960 |
| HGDLRNNKLN | QLSVNLWHLA | QRHGCADTRT | MVKTLEYIKK | QSKQPDMTHL | TELALRLPLQ |
| TRT |