Q7Z2W4
Gene name |
ZC3HAV1 |
Protein name |
Zinc finger CCCH-type antiviral protein 1 |
Names |
ADP-ribosyltransferase diphtheria toxin-like 13, ARTD13, Inactive Poly [ADP-ribose] polymerase 13, PARP13, Zinc finger CCCH domain-containing protein 2, Zinc finger antiviral protein, ZAP |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:56829 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
662 variants for Q7Z2W4
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA167174980 rs1031715619 |
4 | P>A | No |
ClinGen gnomAD |
|
|
rs1031715619 CA369397097 |
4 | P>S | No |
ClinGen gnomAD |
|
|
CA167174960 rs904347097 |
5 | E>D | No |
ClinGen Ensembl |
|
|
rs762158348 CA4507976 |
5 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1584881277 CA369397072 |
6 | V>G | No |
ClinGen Ensembl |
|
|
rs1017967617 CA167174956 |
6 | V>L | No |
ClinGen TOPMed |
|
|
CA4507975 rs751872093 |
7 | C>G | No |
ClinGen ExAC gnomAD |
|
|
CA4507974 rs113181006 |
8 | C>G | No |
ClinGen ExAC gnomAD |
|
|
CA167174946 rs113181006 |
8 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA369397031 rs1311019744 |
9 | F>L | No |
ClinGen TOPMed |
|
|
CA4507973 rs762533295 |
16 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA369396854 rs1297444580 |
16 | A>V | No |
ClinGen gnomAD |
|
|
CA369396833 rs1397922493 |
17 | H>Q | No |
ClinGen gnomAD |
|
|
CA4507971 rs769396100 |
18 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs775024004 CA4507972 COSM484916 |
18 | G>R | kidney [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs759165366 COSM3411644 CA4507970 |
20 | R>H | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA369396775 rs1584881221 |
20 | R>S | No |
ClinGen Ensembl |
|
|
CA4507969 rs776706516 |
22 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA167174912 rs372284348 |
24 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA369396672 rs1238185422 |
25 | A>S | No |
ClinGen TOPMed |
|
|
CA167174910 rs755060863 |
25 | A>V | No |
ClinGen Ensembl |
|
|
rs1180270379 CA369396591 |
28 | Q>* | No |
ClinGen TOPMed |
|
|
rs1265767406 CA369396549 |
29 | E>D | No |
ClinGen gnomAD |
|
|
CA369396504 rs1410456503 |
31 | A>S | No |
ClinGen TOPMed |
|
| TCGA novel | 31 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1254400859 CA369396448 |
34 | E>* | No |
ClinGen gnomAD |
|
|
CA369396422 rs1563145327 |
35 | P>L | No |
ClinGen Ensembl |
|
|
rs557413442 CA4507966 |
37 | L>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1312784242 CA369396338 |
38 | C>S | No |
ClinGen gnomAD |
|
|
rs749443380 CA4507965 |
39 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1277529416 CA369396318 |
39 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA167174855 rs1051439741 |
42 | Q>R | No |
ClinGen gnomAD |
|
|
rs1455619889 CA369396178 |
44 | A>V | No |
ClinGen TOPMed |
|
| TCGA novel | 45 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1398858915 CA369396138 |
47 | D>H | No |
ClinGen gnomAD |
|
|
CA369396117 rs1170656649 |
48 | R>C | No |
ClinGen gnomAD |
|
|
CA369396113 rs1477110553 |
48 | R>H | No |
ClinGen gnomAD |
|
|
CA4507960 rs781608995 |
53 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs757772140 CA4507959 |
54 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4507957 rs764396191 |
55 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369395961 rs1196739916 |
57 | E>K | No |
ClinGen gnomAD |
|
|
rs758835790 CA4507956 |
59 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752268877 CA4507955 |
61 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs765049408 CA4507954 |
62 | R>* | No |
ClinGen ExAC gnomAD |
|
|
rs1222341625 CA369395890 |
62 | R>L | No |
ClinGen gnomAD |
|
|
rs1288176822 CA369395887 |
63 | S>A | No |
ClinGen TOPMed |
|
| TCGA novel | 63 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA369395862 rs1375569595 |
65 | V>A | No |
ClinGen gnomAD |
|
|
CA167174800 rs941557146 |
69 | R>* | No |
ClinGen Ensembl |
|
|
rs941557146 CA369395833 |
69 | R>G | No |
ClinGen Ensembl |
|
|
CA369395831 rs147408079 |
69 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4507952 rs147408079 |
69 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs868641095 CA167174787 |
71 | R>L | No |
ClinGen gnomAD |
|
|
CA369395817 rs1221500804 |
71 | R>W | No |
ClinGen TOPMed |
|
|
rs766372664 CA4507951 |
73 | C>* | No |
ClinGen ExAC gnomAD |
|
|
CA4507950 rs760563298 |
75 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs1457750121 CA369395774 |
75 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA4507949 rs773245091 |
77 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA167174783 rs111525212 |
79 | Q>* | No |
ClinGen Ensembl |
|
|
rs1167238109 CA369395621 |
79 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1167238109 CA369395620 |
79 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA4507948 rs771745880 |
80 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs961506123 CA167174775 |
81 | P>S | No |
ClinGen TOPMed |
|
|
CA369395610 rs961506123 |
81 | P>T | No |
ClinGen TOPMed |
|
|
rs775680381 CA4507946 |
83 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4507947 rs748037252 |
83 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs748037252 CA369395596 |
83 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA4507945 rs770005291 |
84 | N>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA167174745 rs751625881 |
87 | L>F | No |
ClinGen TOPMed |
|
|
CA369395563 rs1182604021 |
88 | C>G | No |
ClinGen TOPMed |
|
| TCGA novel | 89 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4507940 rs778394094 |
94 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs758676794 CA4507939 |
95 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA167174690 rs758676794 |
95 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA167174686 rs754401877 |
97 | N>D | No |
ClinGen Ensembl |
|
|
CA4507938 rs753109410 |
97 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA369395459 rs1376945453 |
98 | Y>C | No |
ClinGen gnomAD |
|
|
rs764924521 CA4507937 |
99 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA369395412 rs1389079813 |
101 | S>F | No |
ClinGen gnomAD |
|
| TCGA novel | 102 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA369395399 rs1425624359 |
102 | E>G | No |
ClinGen gnomAD |
|
|
rs753356975 CA4507935 |
102 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1157038137 CA369395387 |
103 | R>G | No |
ClinGen gnomAD |
|
|
CA4507934 rs765953746 |
103 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1340354099 CA369391832 |
108 | Y>H | No |
ClinGen gnomAD |
|
|
CA4507912 rs546962587 |
112 | V>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs780093930 CA167165370 |
114 | S>* | No |
ClinGen Ensembl |
|
|
rs906353968 CA167165368 |
115 | E>G | No |
ClinGen TOPMed |
|
|
CA4507911 rs751318114 |
116 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA369391735 rs1346016330 |
116 | E>G | No |
ClinGen gnomAD |
|
|
rs762787024 CA4507909 |
121 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA369391642 COSM176938 rs1465015194 |
125 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs372806726 CA4507907 |
126 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4507906 rs142788152 |
127 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369391625 rs1475588108 |
128 | G>R | No |
ClinGen gnomAD |
|
|
CA369391608 rs1184912859 |
130 | N>K | No |
ClinGen gnomAD |
|
|
rs773362502 CA4507905 |
130 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA369391589 rs1422776735 |
133 | E>K | No |
ClinGen TOPMed |
|
|
rs772417782 CA4507904 |
136 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA369391556 rs940302061 |
138 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs940302061 CA167165343 |
138 | L>V | No |
ClinGen TOPMed gnomAD |
|
| rs1363033923 | 145 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA369391488 rs1283686587 |
147 | P>L | No |
ClinGen gnomAD |
|
|
rs1446048661 CA369391485 |
148 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1225468278 CA369390925 |
149 | I>V | No |
ClinGen gnomAD |
|
|
rs1374714592 CA369390912 |
150 | C>R | No |
ClinGen gnomAD |
|
|
rs767609872 CA4507887 |
151 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1283838244 CA369390836 |
155 | G>E | No |
ClinGen TOPMed |
|
|
CA4507886 rs762039015 |
157 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA369390800 rs1321335994 |
158 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
COSM1448438 rs774990430 CA4507885 |
158 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA369390786 rs1385487784 |
159 | Q>L | No |
ClinGen gnomAD |
|
|
CA4507882 rs144121566 |
160 | Q>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1204521288 CA369390764 |
161 | I>V | No |
ClinGen TOPMed |
|
|
CA369390730 rs1584862008 |
163 | N>T | No |
ClinGen Ensembl |
|
|
CA167163589 rs948471243 |
166 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs376619498 CA4507881 |
167 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA167163580 rs946660335 |
170 | R>S | No |
ClinGen TOPMed |
|
|
rs1180923635 CA369390620 |
171 | L>P | No |
ClinGen TOPMed |
|
|
CA369390597 rs1287444758 |
173 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA369390557 rs752035553 |
175 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369390569 rs1292823143 |
175 | D>N | No |
ClinGen gnomAD |
|
|
rs1351666678 CA578622510 |
176 | H>* | No |
ClinGen gnomAD |
|
|
CA167163574 rs913776135 |
176 | H>Q | No |
ClinGen TOPMed |
|
|
CA369390506 rs1224338169 |
179 | R>Q | No |
ClinGen gnomAD |
|
|
rs1563135593 CA369390501 |
180 | G>R | No |
ClinGen Ensembl |
|
|
rs202245976 CA4507876 |
183 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA369390449 rs1297240431 |
183 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs752393493 CA4507875 |
186 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4507874 rs752393493 |
186 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1159185212 CA369390373 |
189 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1159185212 CA369390371 |
189 | R>W | Variant assessed as Somatic; 4.619e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA167163563 rs760499788 |
192 | N>K | No |
ClinGen gnomAD |
|
|
rs1459411713 CA369390316 |
193 | L>P | No |
ClinGen gnomAD |
|
|
CA369390286 rs1425115120 |
195 | D>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA167163559 rs200626900 |
196 | R>K | No |
ClinGen 1000Genomes |
|
|
CA4507872 rs143234647 |
197 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs927723569 CA167163557 |
198 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA369390223 rs1487428910 |
200 | A>D | No |
ClinGen gnomAD |
|
|
CA369390209 rs1311629263 |
201 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA369390215 rs1216606368 |
201 | I>V | No |
ClinGen gnomAD |
|
|
CA369390199 rs1299145475 |
202 | M>R | No |
ClinGen gnomAD |
|
|
CA369390201 rs1299145475 |
202 | M>T | No |
ClinGen gnomAD |
|
|
rs1225233440 CA369390190 |
203 | R>K | No |
ClinGen gnomAD |
|
| TCGA novel | 203 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4507870 rs374920344 |
204 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM242310 rs370273772 CA4507869 |
205 | H>Y | prostate [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs1363636713 CA369390170 |
206 | G>R | No |
ClinGen gnomAD |
|
|
rs763589247 CA4507866 |
210 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs551302731 CA369390139 |
211 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs551302731 CA4507864 |
211 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs746278032 CA4507863 |
216 | Q>* | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 217 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4507862 rs770574459 |
218 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs770574459 CA4507861 |
218 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA369390076 rs1427049153 |
220 | N>D | No |
ClinGen gnomAD |
|
|
CA369390039 rs1264151964 |
224 | M>I | No |
ClinGen gnomAD |
|
|
rs1486073149 CA369390045 |
224 | M>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA369390040 rs1242907635 |
224 | M>R | No |
ClinGen gnomAD |
|
|
CA369390044 rs1486073149 |
224 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA4507860 rs746472160 |
225 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs962327907 CA167163536 |
228 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA369390006 rs1205546184 |
229 | P>S | No |
ClinGen gnomAD |
|
|
CA167163533 rs978329034 |
230 | G>A | No |
ClinGen Ensembl |
|
|
rs777295020 CA4507859 |
231 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA369389997 rs777295020 |
231 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA167162327 rs868707926 |
234 | P>F | No |
ClinGen Ensembl |
|
| TCGA novel | 234 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1417476372 CA369388370 |
234 | P>L | No |
ClinGen TOPMed |
|
| rs1331305820 | 236 | S>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4507830 rs747676639 |
237 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771555470 CA4507831 |
237 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs778841555 CA4507829 |
238 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768487648 CA4507828 |
238 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 239 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4507827 rs749059082 |
241 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs780029396 CA4507826 |
241 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA369388323 rs1290255078 |
242 | A>S | No |
ClinGen gnomAD |
|
|
CA167162316 rs1053742955 |
243 | Y>C | No |
ClinGen TOPMed |
|
|
rs913504690 CA167162321 |
243 | Y>H | No |
ClinGen Ensembl |
|
|
rs530474912 CA4507824 |
244 | R>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs935993514 CA167162307 |
246 | R>T | No |
ClinGen Ensembl |
|
|
CA4507822 rs200555565 |
249 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200555565 CA4507823 |
249 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1367089269 CA369388258 |
252 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA4507820 CA369388247 rs373894332 |
253 | F>L | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1209039272 CA369388241 |
254 | F>C | No |
ClinGen TOPMed gnomAD |
|
|
CA4507818 rs754382370 |
255 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA4507817 rs766705647 |
256 | G>C | No |
ClinGen ExAC gnomAD |
|
|
CA369388224 rs1289080288 |
257 | S>G | No |
ClinGen Ensembl |
|
| TCGA novel | 257 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA369388192 rs1325951244 |
261 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1359266674 CA369388190 |
261 | L>P | No |
ClinGen TOPMed |
|
|
CA369388185 rs761084907 |
262 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs761084907 CA4507816 |
262 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs376879495 CA4507814 |
266 | A>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4507813 rs376879495 |
266 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA369388154 rs1371213275 |
268 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs145812367 CA4507811 |
270 | R>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA369388133 rs1584858943 |
271 | S>A | No |
ClinGen Ensembl |
|
|
CA369388130 rs1305244532 |
271 | S>F | No |
ClinGen gnomAD |
|
|
CA4507810 rs749153361 |
273 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA369388111 rs1428880068 |
274 | P>L | No |
ClinGen gnomAD |
|
|
rs1360055255 CA369388116 |
274 | P>S | No |
ClinGen gnomAD |
|
|
rs541917698 CA4507809 |
276 | P>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs769701197 CA4507808 |
277 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs745725877 CA4507807 |
278 | Q>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369388079 rs1198034281 |
279 | I>T | No |
ClinGen gnomAD |
|
|
rs778075896 CA4507806 |
282 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA369388052 rs1188489550 |
283 | A>S | No |
ClinGen TOPMed |
|
|
CA4507805 rs376183323 |
285 | L>Q | No |
ClinGen ESP ExAC TOPMed |
|
|
CA369388035 rs1182568775 |
286 | E>G | No |
ClinGen TOPMed |
|
|
rs748210844 CA4507804 |
286 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs144037325 CA4507802 |
288 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4507801 rs116723178 |
288 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1223414545 CA369388011 |
290 | V>L | No |
ClinGen gnomAD |
|
|
rs750796740 CA4507798 |
292 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750796740 CA369387983 |
292 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4507796 rs761400535 |
294 | T>S | No |
ClinGen ExAC gnomAD |
|
|
COSM1086092 CA4507795 rs149863045 |
295 | R>C | endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA4507793 rs138485120 |
295 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs138485120 CA4507794 |
295 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4507792 rs775565246 |
296 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs906298178 CA167162230 |
297 | F>V | No |
ClinGen Ensembl |
|
|
rs745601147 CA369387913 |
298 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4507790 rs745601147 |
298 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1221213107 CA369387884 |
301 | G>R | No |
ClinGen Ensembl |
|
|
CA369387854 rs1477337909 |
303 | Q>L | No |
ClinGen gnomAD |
|
|
rs776313383 CA4507789 |
304 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs373433912 CA167162223 |
305 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4507787 rs372920712 |
305 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4507788 rs373433912 |
305 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA167162209 rs780478917 |
306 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780478917 CA4507784 |
306 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4507783 rs780478917 |
306 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369387813 rs1322045647 |
306 | A>V | No |
ClinGen gnomAD |
|
|
CA4507781 COSM1086091 rs750743161 |
307 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs756632011 CA4507782 |
307 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA4507780 rs767745459 |
308 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4507779 rs757693893 |
309 | P>A | No |
ClinGen ExAC TOPMed |
|
|
rs150932310 CA4507774 |
312 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA4507776 rs762486862 |
312 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA4507775 rs150932310 |
312 | S>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA369387719 rs1464932416 |
314 | K>R | No |
ClinGen gnomAD |
|
|
rs142490389 CA4507772 |
316 | T>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1475536637 CA369387564 |
320 | G>E | No |
ClinGen gnomAD |
|
|
rs746886452 CA4507770 |
321 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA369387551 rs1181233523 |
321 | T>R | No |
ClinGen gnomAD |
|
|
rs911473187 CA167162159 |
324 | A>D | No |
ClinGen TOPMed |
|
|
rs375990788 CA4507767 |
325 | G>R | No |
ClinGen ESP ExAC gnomAD |
|
|
CA369387462 rs1204834293 |
326 | T>R | No |
ClinGen gnomAD |
|
|
CA4507765 rs535589363 |
327 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA167162142 rs943322783 |
328 | Q>P | No |
ClinGen gnomAD |
|
|
CA369387436 rs943322783 |
328 | Q>R | No |
ClinGen gnomAD |
|
| TCGA novel | 332 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4507764 rs746355497 |
333 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751959091 CA4507761 |
334 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1233223 rs751252008 CA4507762 |
334 | G>S | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA369387221 rs369685299 |
338 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs919083237 CA167162129 |
338 | D>H | No |
ClinGen gnomAD |
|
|
rs919083237 CA369387240 |
338 | D>N | No |
ClinGen gnomAD |
|
|
rs978185745 CA167162126 |
339 | L>F | No |
ClinGen TOPMed |
|
|
CA369387169 rs1412653793 |
341 | H>R | No |
ClinGen gnomAD |
|
|
rs200536591 CA4507757 |
343 | N>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA167162123 rs765498370 |
345 | G>R | No |
ClinGen Ensembl |
|
|
CA369387088 rs1445971488 |
346 | S>N | No |
ClinGen gnomAD |
|
|
rs759175197 CA4507756 |
347 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs980425112 CA167162119 |
350 | A>V | No |
ClinGen gnomAD |
|
|
rs1470069186 CA369386934 |
355 | S>P | No |
ClinGen gnomAD |
|
|
CA4507755 rs753713164 |
356 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA167162114 rs966761719 |
356 | A>V | No |
ClinGen TOPMed |
|
|
rs139577861 CA4507754 |
357 | P>A | No |
ClinGen ESP ExAC gnomAD |
|
|
rs139577861 CA167162110 |
357 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
CA167162101 rs372280660 |
358 | N>K | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs760326186 CA4507753 |
358 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1361741610 CA369386808 |
361 | S>N | No |
ClinGen gnomAD |
|
|
rs1563133816 CA369386778 |
362 | L>P | No |
ClinGen Ensembl |
|
|
CA4507750 rs763127379 |
363 | T>I | No |
ClinGen ExAC |
|
|
CA4507749 rs775741444 |
364 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
rs769854517 CA4507748 |
366 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4507747 rs746031366 |
367 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs781488748 CA4507746 |
369 | Q>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA4507745 rs771482941 |
369 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
CA4507744 rs747287925 |
370 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA4507742 rs554568246 |
371 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs778772797 CA4507740 |
374 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1470737642 CA369386552 |
375 | T>S | No |
ClinGen gnomAD |
|
|
CA369386540 rs1197603552 |
376 | V>L | No |
ClinGen gnomAD |
|
|
CA369386519 rs1490904087 |
377 | F>Y | No |
ClinGen TOPMed gnomAD |
|
| rs1195701070 | 379 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4507738 rs753401504 |
380 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4507739 rs753401504 |
380 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1292704327 CA369386466 |
380 | T>P | No |
ClinGen gnomAD |
|
|
CA4507734 rs140539997 |
384 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs149380844 CA4507733 COSM326905 |
385 | R>C | lung [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs115288744 CA4507732 |
385 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs149380844 CA369386375 |
385 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1345765798 CA369386333 |
386 | S>F | No |
ClinGen gnomAD |
|
|
rs371539005 CA4507730 |
391 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA369386171 rs1161971009 |
394 | P>L | No |
ClinGen gnomAD |
|
|
rs771304609 CA4507728 |
398 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs1481596670 CA369386067 |
399 | T>I | No |
ClinGen gnomAD |
|
|
rs748527282 CA4507724 |
403 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA4507722 rs754678448 |
410 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA167162007 rs890417827 |
411 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
rs374328599 CA4507721 |
412 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA369385847 rs1261112749 |
414 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
rs370624706 CA4507720 |
414 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1433861125 CA369385789 |
417 | S>R | No |
ClinGen gnomAD |
|
| TCGA novel | 418 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1294449740 CA369385721 |
421 | D>G | No |
ClinGen gnomAD |
|
|
CA369385667 CA167161992 rs929363583 |
423 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1288935896 CA369385654 |
424 | P>L | No |
ClinGen gnomAD |
|
|
CA4507719 rs755625154 |
426 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA369385607 rs1406025720 |
427 | L>P | No |
ClinGen gnomAD |
|
|
CA167161986 rs919126948 |
428 | F>S | No |
ClinGen Ensembl |
|
|
rs1335275202 CA369385585 |
429 | N>D | No |
ClinGen gnomAD |
|
|
rs750365070 CA4507718 |
430 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs150617365 CA4507717 |
431 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs756983309 CA167161976 |
432 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756983309 CA4507716 |
432 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751373341 CA4507715 |
436 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs559759408 CA4507712 |
439 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4507713 rs759834356 |
439 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1241231409 CA369385426 |
440 | T>A | No |
ClinGen gnomAD |
|
|
rs1205449387 COSM599408 CA369385408 |
441 | S>F | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs766461269 CA4507711 |
442 | T>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 443 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs376101521 CA4507710 |
443 | R>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1622413 CA369385279 rs1224868861 |
452 | S>G | liver [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1244646378 CA369385249 |
453 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1244646378 CA369385252 |
453 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs773786419 CA4507709 |
453 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369385228 rs1313616467 |
454 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA369385217 rs1403439859 |
455 | R>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
| TCGA novel | 456 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA369385169 rs1297972005 |
457 | I>M | No |
ClinGen gnomAD |
|
|
rs772718618 CA4507708 |
460 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs1210520520 CA369385086 |
463 | Q>* | No |
ClinGen TOPMed |
|
|
rs748473964 CA4507707 |
465 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs774883932 CA4507706 COSM1187452 |
466 | G>R | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs768937593 CA4507705 |
467 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA369384959 rs1249645814 |
470 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
CA4507703 rs779627291 |
470 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA4507702 rs530439298 |
471 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs138786712 CA167161920 |
471 | D>G | No |
ClinGen 1000Genomes gnomAD |
|
|
rs1584858207 CA369384952 |
471 | D>N | No |
ClinGen Ensembl |
|
|
CA369384931 rs138786712 |
471 | D>V | No |
ClinGen 1000Genomes gnomAD |
|
|
CA369384919 rs1221256091 |
472 | V>D | No |
ClinGen gnomAD |
|
|
rs1316531631 CA369384904 |
473 | Q>R | No |
ClinGen gnomAD |
|
|
rs568024631 CA4507701 |
474 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs1163684849 CA369384871 |
475 | T>P | No |
ClinGen TOPMed |
|
|
CA4507699 rs751316250 |
478 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369384785 rs763920467 |
479 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763920467 CA4507697 |
479 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs78353839 CA4507695 |
481 | D>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4507696 rs758177938 |
481 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs78353839 CA369384731 |
481 | D>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4507693 rs760749474 |
485 | R>G | No |
ClinGen ExAC gnomAD |
|
|
VAR_018454 rs2236426 CA4507692 |
485 | R>K | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA369384653 rs2236426 |
485 | R>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1458421588 CA369384630 |
487 | A>T | No |
ClinGen gnomAD |
|
|
rs140606352 CA4507691 |
489 | V>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4507689 rs775045266 |
490 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369384553 rs1198325818 |
491 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA369383042 rs1287783083 |
491 | D>V | No |
ClinGen gnomAD |
|
|
rs765974927 CA4507628 |
495 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369382958 rs1323090774 |
499 | T>A | No |
ClinGen gnomAD |
|
|
rs772963065 CA4507626 |
500 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761449560 CA4507624 |
502 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA4507623 rs774360949 |
504 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA167161469 rs758162800 |
505 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA4507622 rs201412553 |
505 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1474446968 CA369382877 |
506 | D>H | No |
ClinGen gnomAD |
|
|
rs1180888279 CA369382846 |
508 | D>N | No |
ClinGen TOPMed |
|
| TCGA novel | 510 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs754098188 CA167161463 |
512 | I>V | No |
ClinGen Ensembl |
|
|
rs1194112477 CA369382735 |
514 | L>R | No |
ClinGen TOPMed |
|
|
CA369382713 rs1261015263 |
515 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs747177569 CA4507618 |
517 | L>M | No |
ClinGen ExAC gnomAD |
|
|
rs778116152 CA4507617 |
518 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369382661 rs1294347020 |
518 | C>Y | No |
ClinGen gnomAD |
|
|
rs565550945 CA369382632 |
520 | G>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs565550945 CA4507615 |
520 | G>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs143317430 CA4507613 |
522 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs748184784 CA369381953 |
525 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748184784 CA4507598 |
525 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369381950 rs1372566338 |
526 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA369381951 rs1372566338 |
526 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA4507597 rs778932560 |
528 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA167160709 rs893829525 |
529 | K>N | No |
ClinGen gnomAD |
|
|
rs1563132230 CA369381909 |
531 | H>Q | No |
ClinGen Ensembl |
|
|
rs1563132235 CA369381913 |
531 | H>Y | No |
ClinGen Ensembl |
|
|
CA167160703 rs750837115 |
536 | Y>* | No |
ClinGen Ensembl |
|
|
rs749777596 CA4507595 |
537 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768772866 CA4507596 |
537 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369381849 rs1221511410 |
540 | M>I | No |
ClinGen TOPMed |
|
|
CA4507594 rs192061967 |
540 | M>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs901272075 CA167160693 |
540 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
rs553547356 CA4507593 |
541 | L>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA369381834 rs1252026163 |
543 | G>S | No |
ClinGen gnomAD |
|
|
rs376190046 CA4507592 |
544 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA167160677 rs374071219 |
547 | T>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4507590 rs374071219 |
547 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs776212944 CA4507588 |
549 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1408323488 CA369381780 |
550 | E>D | No |
ClinGen gnomAD |
|
|
CA4507587 rs762610651 |
550 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA369381761 rs1355764025 |
553 | E>Q | No |
ClinGen Ensembl |
|
|
rs752678784 CA4507586 |
554 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA167160648 rs770670780 |
555 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776518707 CA4507583 |
555 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369381742 rs1406065020 |
556 | E>K | No |
ClinGen TOPMed |
|
|
CA369381735 rs1295279834 |
557 | K>E | No |
ClinGen gnomAD |
|
|
rs373103348 CA4507580 |
558 | G>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA369381695 rs1279875494 |
562 | P>L | No |
ClinGen TOPMed |
|
|
rs760113819 CA167160642 |
562 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA369381694 rs1198216463 |
563 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs977163852 CA369381682 |
564 | I>M | No |
ClinGen gnomAD |
|
|
VAR_018455 CA4507576 rs2297241 CA369381676 |
565 | H>Q | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs571328030 CA4507577 |
565 | H>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4507575 rs746180824 |
566 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369381344 rs1399979131 |
567 | C>S | No |
ClinGen TOPMed |
|
|
CA369381332 rs1563131216 |
568 | S>Y | No |
ClinGen Ensembl |
|
|
CA369381318 rs1365760322 |
569 | V>A | No |
ClinGen gnomAD |
|
|
CA369381314 rs1407598279 |
570 | G>R | No |
ClinGen TOPMed |
|
|
rs769805444 CA4507555 |
572 | Y>D | No |
ClinGen ExAC TOPMed |
|
|
rs777062580 CA4507553 |
573 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1276651704 CA369381272 |
573 | T>R | No |
ClinGen gnomAD |
|
|
CA4507552 rs150148096 |
574 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1187300879 CA369381256 |
575 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs140395760 CA4507549 |
577 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs144346512 CA4507550 |
577 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA369381223 rs1461861119 |
578 | V>G | No |
ClinGen TOPMed |
|
|
CA369381211 rs1281055883 |
579 | M>I | No |
ClinGen gnomAD |
|
|
rs1441020851 CA369381216 |
579 | M>T | No |
ClinGen gnomAD |
|
|
rs778461468 CA4507547 |
580 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369381194 rs1421034168 |
580 | S>R | No |
ClinGen TOPMed |
|
| TCGA novel | 581 | C>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1341631282 CA369381170 |
582 | D>V | No |
ClinGen gnomAD |
|
|
CA369381161 rs1183740167 |
583 | S>F | No |
ClinGen TOPMed |
|
|
rs1230633481 CA369381141 |
584 | F>L | No |
ClinGen gnomAD |
|
|
CA4507546 rs150562494 |
584 | F>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 586 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA369381122 rs1283481569 |
587 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
CA369381120 rs1445588802 |
587 | R>Q | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 588 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs572573665 CA4507543 |
590 | S>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1334466058 CA369381100 |
591 | T>A | No |
ClinGen gnomAD |
|
|
rs1334466058 CA369381099 |
591 | T>P | No |
ClinGen gnomAD |
|
| rs763897760 | 594 | S>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA167159652 rs142594623 |
594 | S>C | No |
ClinGen ESP gnomAD |
|
|
CA369381073 rs1584854014 |
595 | V>A | No |
ClinGen Ensembl |
|
|
CA369381067 rs1469923360 |
596 | T>I | No |
ClinGen TOPMed |
|
|
CA369381072 rs1584854008 |
596 | T>P | No |
ClinGen Ensembl |
|
|
rs763133395 CA4507539 |
599 | A>D | No |
ClinGen ExAC TOPMed |
|
|
rs140829327 CA4507540 |
599 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 599 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1429782165 CA369381019 |
604 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs375243384 CA4507538 |
604 | T>I | No |
ClinGen ESP ExAC gnomAD |
|
|
CA167159636 rs970204462 |
606 | K>R | No |
ClinGen Ensembl |
|
|
rs777133066 CA4507535 |
610 | Y>N | No |
ClinGen ExAC gnomAD |
|
|
rs992903305 CA167159632 |
616 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA369380928 rs992903305 |
616 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1226909125 CA369380913 |
618 | W>C | No |
ClinGen TOPMed |
|
|
CA369380908 rs1285814897 |
619 | I>T | No |
ClinGen TOPMed |
|
|
rs773745564 CA4507532 |
620 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs370684084 CA167159619 |
621 | Y>C | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA369380873 rs1254265426 |
624 | E>A | No |
ClinGen TOPMed |
|
|
rs181641415 CA4507511 |
625 | K>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4507508 COSM1187451 rs761230891 |
628 | R>Q | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs141827161 CA4507509 |
628 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs531212366 CA4507507 |
630 | N>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 631 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA167194118 rs542589842 |
631 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
rs745793742 CA4507504 |
633 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4507503 rs781174357 COSM1448433 |
634 | D>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA369400148 rs1584846922 |
635 | S>P | No |
ClinGen Ensembl |
|
| TCGA novel | 636 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs757010358 CA4507502 |
636 | S>A | No |
ClinGen ExAC gnomAD |
|
|
rs1433066815 CA369400108 |
637 | Y>H | No |
ClinGen TOPMed |
|
|
rs1392094065 CA369400087 |
638 | L>V | No |
ClinGen TOPMed |
|
|
rs1189567999 CA369400052 |
640 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1189567999 CA369400049 |
640 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs754156642 CA4507498 |
641 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA369399973 rs1269794599 |
645 | C>R | No |
ClinGen gnomAD |
|
|
CA167194087 rs756129404 |
645 | C>S | No |
ClinGen gnomAD |
|
|
CA4507495 rs750890047 |
646 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs762188555 CA4507493 |
647 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA369399888 rs1304880003 |
649 | V>A | No |
ClinGen gnomAD |
|
| TCGA novel | 649 | V>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 650 | V>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4507492 rs774609371 |
651 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs769102632 CA4507491 |
654 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 657 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4507489 rs768601088 |
657 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA4507488 rs769290137 |
658 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745387450 CA4507487 |
658 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369399734 rs1439990612 |
660 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1416301794 CA369399707 |
662 | S>N | No |
ClinGen gnomAD |
|
|
CA369399680 rs1395763642 |
664 | Q>R | No |
ClinGen gnomAD |
|
|
rs775058187 CA4507468 |
671 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4507467 rs764883279 |
672 | A>V | No |
ClinGen ExAC |
|
|
CA4507466 rs146300884 |
674 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 675 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4507465 rs776154187 |
676 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs1250548814 CA369398882 |
679 | V>I | No |
ClinGen gnomAD |
|
|
CA167191890 rs947720690 |
680 | I>N | No |
ClinGen Ensembl |
|
|
rs1277466434 CA369398771 |
685 | F>L | No |
ClinGen gnomAD |
|
|
rs201818853 CA4507463 |
685 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369398755 rs1239431652 |
687 | P>L | No |
ClinGen gnomAD |
|
|
CA369398724 rs1228787791 |
689 | W>C | No |
ClinGen gnomAD |
|
|
CA369398709 rs1321573502 |
691 | V>M | No |
ClinGen gnomAD |
|
|
rs372154163 CA4507462 |
693 | Q>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs764437934 CA167191879 |
695 | K>T | No |
ClinGen Ensembl |
|
|
rs1230341019 CA369398643 |
696 | R>T | No |
ClinGen gnomAD |
|
|
CA4507461 rs771694806 |
697 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs2297236 CA369397623 |
701 | Q>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
VAR_054319 rs2297236 CA4507418 |
701 | Q>E | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA369397598 rs1282578941 |
702 | P>L | No |
ClinGen gnomAD |
|
|
CA4507417 rs199696836 |
704 | K>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA369397585 rs1235048254 |
704 | K>Q | No |
ClinGen gnomAD |
|
|
rs772191160 CA4507416 |
706 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA369397465 rs754247898 |
712 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs191765483 CA4507413 |
712 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4507412 rs754247898 |
712 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1214374312 CA369397445 |
713 | T>S | No |
ClinGen gnomAD |
|
|
CA4507411 rs141029907 |
715 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4507410 COSM1448431 rs148135153 |
715 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs771785741 CA167188674 |
716 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs745403454 CA4507409 |
717 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 717 | Q>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM1699428 rs767120888 CA4507408 |
718 | E>K | Variant assessed as Somatic; 0.0 impact. skin [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA369397361 rs1373990651 |
718 | E>V | No |
ClinGen gnomAD |
|
|
CA4507405 rs764142029 |
719 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA4507406 rs751477174 |
719 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs141845165 CA4507403 |
720 | F>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1216247308 CA369397309 |
721 | C>Y | No |
ClinGen gnomAD |
|
|
rs772137932 CA4507399 |
725 | S>* | No |
ClinGen ExAC gnomAD |
|
|
CA167187928 rs977453602 |
732 | E>G | No |
ClinGen Ensembl |
|
| TCGA novel | 733 | I>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA369396890 rs1346684781 |
734 | H>Y | No |
ClinGen TOPMed |
|
|
rs749789154 CA4507378 |
736 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs775926377 CA4507377 |
737 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4507376 rs770127819 |
742 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369396680 rs1563123512 |
743 | V>I | No |
ClinGen Ensembl |
|
|
rs1003122409 CA167187870 |
744 | S>N | No |
ClinGen TOPMed |
|
|
CA4507375 rs746250062 |
749 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1584837397 CA369396489 |
749 | A>V | No |
ClinGen Ensembl |
|
| TCGA novel | 750 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs780945445 CA4507374 |
750 | S>P | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 751 | M>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1470537131 CA369396412 |
752 | K>R | No |
ClinGen gnomAD |
|
| TCGA novel | 753 | N>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 754 | F>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4507372 rs201721838 |
756 | I>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs370576444 CA4507373 |
756 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs201452196 CA167187838 |
757 | E>G | No |
ClinGen Ensembl |
|
|
CA167187829 rs201452196 |
757 | E>V | No |
ClinGen Ensembl |
|
|
CA4507371 rs777402962 |
758 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs990654313 CA167187818 |
762 | I>T | No |
ClinGen Ensembl |
|
|
rs1207825176 CA369396146 |
763 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA167187812 rs779096298 |
767 | L>V | No |
ClinGen Ensembl |
|
|
rs757301345 CA167187806 |
769 | D>G | No |
ClinGen Ensembl |
|
|
CA4507369 rs752678086 |
770 | K>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 771 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA167187794 rs997358689 |
772 | T>A | No |
ClinGen Ensembl |
|
|
TCGA novel rs763041405 CA4507344 |
773 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC TOPMed gnomAD NCI-TCGA |
|
CA369395504 rs1345416305 |
774 | K>N | No |
ClinGen TOPMed |
|
|
rs376696476 CA4507343 |
776 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
rs13438211 CA4507341 |
777 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA167187382 rs1041896099 |
778 | M>I | No |
ClinGen gnomAD |
|
|
rs777338738 CA4507340 |
778 | M>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA167187385 rs544506534 |
778 | M>V | No |
ClinGen Ensembl |
|
|
rs1458989948 CA369395433 |
780 | E>Q | No |
ClinGen TOPMed |
|
|
rs771420015 CA4507339 |
782 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA369395376 rs1584836781 |
783 | K>N | No |
ClinGen Ensembl |
|
|
rs761129438 CA4507338 |
785 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs373044902 CA4507337 |
786 | F>I | No |
ClinGen ESP ExAC gnomAD |
|
|
CA167187363 rs538987584 |
787 | Y>H | No |
ClinGen 1000Genomes |
|
|
rs1215473102 CA369395317 |
788 | A>E | No |
ClinGen gnomAD |
|
|
rs1215473102 CA369395314 |
788 | A>V | No |
ClinGen gnomAD |
|
|
CA4507335 rs77436247 |
789 | T>K | No |
ClinGen ExAC gnomAD |
|
|
rs1376137967 CA369395290 |
790 | S>R | No |
ClinGen gnomAD |
|
|
rs778262543 CA4507334 |
791 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369395286 rs778262543 |
791 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4507333 COSM1086083 rs187388789 |
791 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA4507332 rs749217923 |
792 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369395261 rs375847014 |
793 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1170926421 CA369395269 |
793 | Y>D | No |
ClinGen gnomAD |
|
|
rs375847014 CA4507331 |
793 | Y>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4507329 rs750206388 |
794 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA4507328 rs778016091 |
797 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs758519775 CA4507327 |
798 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs145716414 CA4507326 |
799 | S>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA167187300 rs145716414 |
799 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1388786019 CA369395163 |
801 | N>H | No |
ClinGen TOPMed |
|
|
CA4507322 rs767010548 |
805 | F>V | No |
ClinGen ExAC gnomAD |
|
|
rs761078215 CA4507321 |
806 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs372527602 CA4507320 |
807 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4507319 rs767972022 |
810 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs368982868 CA4507318 |
812 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs868542175 CA167187236 |
815 | G>R | No |
ClinGen gnomAD |
|
|
CA369394952 rs1479352557 |
816 | K>R | No |
ClinGen TOPMed |
|
|
CA4507299 rs773815590 |
817 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369394160 rs1454952793 |
819 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs762409766 CA4507297 |
820 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs774951736 CA4507296 |
822 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs891790917 CA167182810 |
823 | D>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA4507295 rs769345135 |
824 | A>P | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 824 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1195935317 CA369394096 |
825 | I>V | No |
ClinGen gnomAD |
|
|
rs367685615 CA4507294 |
826 | Y>C | No |
ClinGen ESP ExAC gnomAD |
|
|
rs776701019 CA4507293 |
828 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1002919032 CA167182798 |
828 | H>Y | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 830 | N>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1486935291 CA369394022 |
831 | C>S | No |
ClinGen gnomAD |
|
|
rs770566838 CA4507292 |
832 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs139161769 CA4507289 |
833 | Y>* | No |
ClinGen ESP ExAC TOPMed |
|
| TCGA novel | 834 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1345683594 CA369393977 |
835 | A>D | No |
ClinGen gnomAD |
|
|
CA4507288 COSM1448430 rs375607958 |
838 | V>I | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
COSM1568603 rs371159477 CA4507286 |
839 | V>I | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA369393892 rs1315877504 |
840 | M>T | No |
ClinGen gnomAD |
|
|
rs1563121299 CA369393862 |
841 | F>L | No |
ClinGen Ensembl |
|
|
CA167182706 rs777433113 |
842 | V>I | No |
ClinGen gnomAD |
|
|
CA4507284 rs781727992 |
844 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4507285 rs181282164 |
844 | Q>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA167182704 rs181282164 |
844 | Q>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4507282 rs3735007 VAR_018456 |
851 | T>I | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA4507281 rs764482822 |
855 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA4507280 rs542431197 |
856 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1262650181 CA369393618 |
858 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs776377588 CA4507276 |
860 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1396856668 CA369393537 |
863 | Q>H | No |
ClinGen TOPMed |
|
|
rs770927065 CA4507275 |
863 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
COSM295865 CA369393519 rs3735008 |
864 | F>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs773115393 CA4507273 |
865 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4507272 rs772047303 |
866 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA4507271 rs749513554 |
867 | C>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs749513554 CA369393474 |
867 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4507270 rs200253491 |
868 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369393449 rs1329168806 |
869 | D>A | No |
ClinGen TOPMed |
|
|
CA167182563 rs148093298 |
870 | T>A | No |
ClinGen 1000Genomes |
|
|
CA4507269 rs769702561 |
870 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs141924548 CA4507268 |
872 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs141924548 CA369393396 |
872 | S>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA369393388 rs1584831862 |
873 | N>D | No |
ClinGen Ensembl |
|
|
rs560775418 CA167182522 |
873 | N>I | No |
ClinGen Ensembl |
|
|
CA167182507 rs868038766 |
874 | P>S | No |
ClinGen Ensembl |
|
|
CA167182490 rs1004661368 |
876 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA369393212 rs1166548742 |
883 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
CA369393214 rs1166548742 |
883 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs543176908 CA4507266 |
885 | V>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs752110165 CA4507265 |
886 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
rs1187489292 CA369393123 |
888 | Q>K | No |
ClinGen gnomAD |
|
|
rs371565565 CA167182416 |
894 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1188686112 CA369393013 |
894 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA369392940 rs1197384524 |
898 | A>G | No |
ClinGen gnomAD |
|
|
CA4507263 rs758830721 |
898 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA369392917 rs148750088 |
899 | C>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4507260 rs758925075 |
900 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 903 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
No associated diseases with Q7Z2W4
5 regional properties for Q7Z2W4
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Zinc finger, CCCH-type | 173 - 194 | IPR000571 |
| domain | WWE domain | 594 - 681 | IPR004170 |
| domain | Poly(ADP-ribose) polymerase, catalytic domain | 716 - 902 | IPR012317 |
| domain | ZAP, zinc finger | 143 - 170 | IPR040954 |
| domain | ZAP, helix turn helix N-terminal domain | 5 - 66 | IPR041360 |
Functions
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| cadherin binding | Binding to cadherin, a type I membrane protein involved in cell adhesion. |
| metal ion binding | Binding to a metal ion. |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
10 GO annotations of biological process
| Name | Definition |
|---|---|
| defense response to virus | Reactions triggered in response to the presence of a virus that act to protect the cell or organism. |
| innate immune response | Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens. |
| negative regulation of viral genome replication | Any process that stops, prevents, or reduces the frequency, rate or extent of viral genome replication. |
| positive regulation of I-kappaB kinase/NF-kappaB signaling | Any process that activates or increases the frequency, rate or extent of I-kappaB kinase/NF-kappaB signaling. |
| positive regulation of interferon-alpha production | Any process that activates or increases the frequency, rate, or extent of interferon-alpha production. |
| positive regulation of interferon-beta production | Any process that activates or increases the frequency, rate, or extent of interferon-beta production. |
| positive regulation of mRNA catabolic process | Any process that increases the rate, frequency, or extent of a mRNA catabolic process, the chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage. |
| positive regulation of RIG-I signaling pathway | Any process that activates or increases the frequency, rate or extent of RIG-I signaling pathway. |
| positive regulation of type I interferon production | Any process that activates or increases the frequency, rate, or extent of type I interferon production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families. |
| response to virus | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MADPEVCCFI | TKILCAHGGR | MALDALLQEI | ALSEPQLCEV | LQVAGPDRFV | VLETGGEAGI |
| 70 | 80 | 90 | 100 | 110 | 120 |
| TRSVVATTRA | RVCRRKYCQR | PCDNLHLCKL | NLLGRCNYSQ | SERNLCKYSH | EVLSEENFKV |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LKNHELSGLN | KEELAVLLLQ | SDPFFMPEIC | KSYKGEGRQQ | ICNQQPPCSR | LHICDHFTRG |
| 190 | 200 | 210 | 220 | 230 | 240 |
| NCRFPNCLRS | HNLMDRKVLA | IMREHGLNPD | VVQNIQDICN | SKHMQKNPPG | PRAPSSHRRN |
| 250 | 260 | 270 | 280 | 290 | 300 |
| MAYRARSKSR | DRFFQGSQEF | LASASASAER | SCTPSPDQIS | HRASLEDAPV | DDLTRKFTYL |
| 310 | 320 | 330 | 340 | 350 | 360 |
| GSQDRARPPS | GSSKATDLGG | TSQAGTSQRF | LENGSQEDLL | HGNPGSTYLA | SNSTSAPNWK |
| 370 | 380 | 390 | 400 | 410 | 420 |
| SLTSWTNDQG | ARRKTVFSPT | LPAARSSLGS | LQTPEAVTTR | KGTGLLSSDY | RIINGKSGTQ |
| 430 | 440 | 450 | 460 | 470 | 480 |
| DIQPGPLFNN | NADGVATDIT | STRSLNYKST | SSGHREISSP | RIQDAGPASR | DVQATGRIAD |
| 490 | 500 | 510 | 520 | 530 | 540 |
| DADPRVALVN | DSLSDVTSTT | SSRVDDHDSE | EICLDHLCKG | CPLNGSCSKV | HFHLPYRWQM |
| 550 | 560 | 570 | 580 | 590 | 600 |
| LIGKTWTDFE | HMETIEKGYC | NPGIHLCSVG | SYTINFRVMS | CDSFPIRRLS | TPSSVTKPAN |
| 610 | 620 | 630 | 640 | 650 | 660 |
| SVFTTKWIWY | WKNESGTWIQ | YGEEKDKRKN | SNVDSSYLES | LYQSCPRGVV | PFQAGSRNYE |
| 670 | 680 | 690 | 700 | 710 | 720 |
| LSFQGMIQTN | IASKTQKDVI | RRPTFVPQWY | VQQMKRGPDH | QPAKTSSVSL | TATFRPQEDF |
| 730 | 740 | 750 | 760 | 770 | 780 |
| CFLSSKKYKL | SEIHHLHPEY | VRVSEHFKAS | MKNFKIEKIK | KIENSELLDK | FTWKKSQMKE |
| 790 | 800 | 810 | 820 | 830 | 840 |
| EGKLLFYATS | RAYVESICSN | NFDSFLHETH | ENKYGKGIYF | AKDAIYSHKN | CPYDAKNVVM |
| 850 | 860 | 870 | 880 | 890 | 900 |
| FVAQVLVGKF | TEGNITYTSP | PPQFDSCVDT | RSNPSVFVIF | QKDQVYPQYV | IEYTEDKACV |
| IS |