Q6W3E5
Gene name |
GDPD4 (GDE6, UGPQ) |
Protein name |
Glycerophosphodiester phosphodiesterase domain-containing protein 4 |
Names |
Glycerophosphodiester phosphodiesterase 6, UgpQ |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:220032 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q6W3E5
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q6W3E5-F1 | Predicted | AlphaFoldDB |
550 variants for Q6W3E5
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA382089743 rs1366919707 |
7 | I>L | No |
ClinGen TOPMed gnomAD |
|
|
CA382089737 rs1300698376 |
7 | I>M | No |
ClinGen gnomAD |
|
| TCGA novel | 10 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs765463570 CA382089715 |
11 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6199784 rs759673381 |
11 | S>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA6199785 rs765463570 |
11 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1172073544 CA382089708 |
12 | E>* | No |
ClinGen gnomAD |
|
|
CA382089694 rs766937386 |
14 | F>I | No |
ClinGen ExAC TOPMed |
|
|
CA6199782 rs766937386 |
14 | F>V | No |
ClinGen ExAC TOPMed |
|
|
CA381948681 rs1244388164 |
18 | W>C | No |
ClinGen TOPMed |
|
|
CA224840324 rs979416851 |
19 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA224840326 rs952360471 |
19 | V>I | No |
ClinGen Ensembl |
|
|
rs1396965156 CA381948636 |
20 | T>I | No |
ClinGen gnomAD |
|
|
rs1179191011 CA381948650 |
20 | T>P | No |
ClinGen gnomAD |
|
|
rs375519795 CA6199757 |
24 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381948570 rs375519795 COSM3703701 COSM3703700 |
24 | T>K | liver [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs375519795 CA6199758 |
24 | T>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6199755 rs762181015 |
25 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA224840317 rs1023718576 |
27 | W>C | No |
ClinGen TOPMed |
|
|
CA381948509 rs1282610994 |
28 | F>L | No |
ClinGen TOPMed |
|
|
rs1261255304 CA381948437 |
31 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1028030293 CA224840308 |
32 | I>N | No |
ClinGen Ensembl |
|
|
CA6199754 rs775056485 |
32 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 33 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1308459541 CA381948320 |
37 | L>S | No |
ClinGen gnomAD |
|
|
rs1179996296 CA381948312 |
38 | A>T | No |
ClinGen TOPMed |
|
|
rs776257320 CA6199751 |
39 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770746251 CA6199750 |
41 | L>M | No |
ClinGen ExAC |
|
|
CA381948264 rs1303048477 |
41 | L>R | No |
ClinGen gnomAD |
|
|
CA6199749 rs747012694 |
43 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA381948237 rs1174919590 |
44 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1014682043 CA224840297 |
45 | S>C | No |
ClinGen TOPMed |
|
|
rs1014682043 CA381948224 |
45 | S>F | No |
ClinGen TOPMed |
|
|
rs202205055 CA6199748 |
45 | S>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs747985372 CA6199746 |
47 | L>* | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 47 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 49 | L>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 50 | L>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1203720806 CA381947941 |
50 | L>S | No |
ClinGen TOPMed |
|
|
CA224839359 rs958113918 |
52 | G>A | No |
ClinGen Ensembl |
|
|
CA6199729 rs773242113 |
52 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA224839352 rs545069722 CA6199728 |
54 | L>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs747932499 CA6199727 |
55 | L>* | No |
ClinGen ExAC gnomAD |
|
|
rs774239751 CA6199726 |
57 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA381947832 rs1442627702 |
58 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA6199725 rs768755749 |
59 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA6199723 rs140021398 |
63 | Y>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381947743 rs1179950433 |
64 | L>P | No |
ClinGen gnomAD |
|
|
CA224839337 rs905806159 |
66 | L>S | No |
ClinGen TOPMed gnomAD |
|
|
CA381947719 rs1244589781 |
66 | L>V | No |
ClinGen gnomAD |
|
|
CA6199720 rs781629601 |
67 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA224864483 rs947149581 |
70 | I>M | No |
ClinGen TOPMed |
|
|
rs1323214043 CA381954762 |
73 | L>V | No |
ClinGen gnomAD |
|
|
CA381954748 rs1165975505 |
75 | V>G | No |
ClinGen gnomAD |
|
|
rs907305483 CA224864471 |
81 | I>T | No |
ClinGen Ensembl |
|
|
rs193159718 CA6199699 |
81 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA224864465 rs374581617 |
83 | M>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs374581617 CA6199698 |
83 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 84 | F>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1427579073 CA381954688 |
85 | I>L | No |
ClinGen TOPMed |
|
|
CA381954687 rs1427579073 |
85 | I>V | No |
ClinGen TOPMed |
|
|
rs758745585 CA381954680 |
86 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758745585 CA6199697 |
86 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1267541866 CA381954674 |
87 | C>R | No |
ClinGen gnomAD |
|
|
rs753023022 CA6199696 |
89 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs773691312 CA224864461 |
89 | F>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs756365708 CA6199695 |
91 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6199694 rs755869312 |
91 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1317613424 CA381954611 |
95 | L>P | No |
ClinGen gnomAD |
|
| TCGA novel | 95 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6199692 rs749945929 |
96 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs767194302 CA6199691 |
100 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224864412 rs1004462099 |
101 | M>R | No |
ClinGen Ensembl |
|
|
rs959613617 CA224864415 |
101 | M>V | No |
ClinGen TOPMed |
|
|
CA6199690 rs199788200 |
102 | Q>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1469683130 CA381954551 |
103 | I>M | No |
ClinGen gnomAD |
|
|
CA381954554 rs1352846391 |
103 | I>T | No |
ClinGen gnomAD |
|
|
rs1026389832 CA224864363 |
103 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA381954546 rs1278071253 |
104 | F>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1039360602 CA224864354 |
105 | A>G | No |
ClinGen Ensembl |
|
|
CA224864361 rs899726571 |
105 | A>T | No |
ClinGen Ensembl |
|
|
rs748511385 CA6199676 |
107 | Y>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6199675 rs779485284 |
107 | Y>S | No |
ClinGen ExAC gnomAD |
|
|
CA6199670 rs146103137 |
108 | V>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6199672 rs756752584 CA6199673 |
108 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756752584 CA6199671 |
108 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1301208425 CA381954522 |
109 | H>Y | No |
ClinGen TOPMed |
|
|
CA6199668 rs375206286 |
110 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA224864315 rs977103803 |
111 | V>A | No |
ClinGen Ensembl |
|
|
CA6199667 rs752535124 |
112 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6199665 rs759343431 |
113 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs201478409 CA6199666 |
113 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1225456138 CA381954487 |
115 | V>L | No |
ClinGen TOPMed |
|
| TCGA novel | 117 | V>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6199664 rs776789747 |
117 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA6199663 rs766605561 |
119 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1591564910 CA381954442 |
121 | W>C | No |
ClinGen Ensembl |
|
|
CA6199662 rs760783918 |
122 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA381954437 rs1217128860 |
122 | P>H | No |
ClinGen gnomAD |
|
|
rs773201803 CA6199661 |
123 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs748659400 CA6199660 |
124 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6199659 rs748659400 |
124 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6199657 rs367777591 |
127 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA224864265 rs959010686 |
128 | A>V | No |
ClinGen Ensembl |
|
|
CA381954398 rs1489525523 |
129 | C>R | No |
ClinGen TOPMed |
|
|
rs1489525523 CA381954399 |
129 | C>S | No |
ClinGen TOPMed |
|
|
CA6199656 rs143423593 |
134 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA381954345 rs1422123682 |
135 | R>* | No |
ClinGen gnomAD |
|
|
CA6199635 rs776039225 |
136 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs770614226 CA6199634 |
139 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA224863615 rs1014432443 |
139 | Y>F | No |
ClinGen Ensembl |
|
|
CA6199633 rs746701100 |
140 | R>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1252068456 CA381954306 |
140 | R>S | No |
ClinGen TOPMed |
|
| TCGA novel | 141 | M>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs750117862 CA6199632 |
143 | H>L | No |
ClinGen ExAC gnomAD |
|
|
CA6199631 rs757785207 |
143 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6199630 rs747675846 |
144 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA6199629 rs778797543 |
146 | K>I | No |
ClinGen ExAC gnomAD |
|
|
rs930921354 CA224863567 |
147 | K>Q | No |
ClinGen Ensembl |
|
| rs757321216 | 148 | R>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1565534482 CA381954254 |
148 | R>T | No |
ClinGen Ensembl |
|
|
rs1224034707 CA381954248 |
149 | L>F | No |
ClinGen gnomAD |
|
|
CA381954246 rs1325132707 |
149 | L>H | No |
ClinGen gnomAD |
|
|
CA381954244 rs1298520718 |
150 | K>Q | No |
ClinGen gnomAD |
|
|
rs112934886 CA6199626 |
151 | Q>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs779768844 CA6199625 |
151 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA6199623 rs531187242 |
152 | C>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA6199622 rs767812220 |
154 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA381954208 rs1170666511 |
155 | I>F | No |
ClinGen gnomAD |
|
|
CA224863555 rs565578867 |
157 | R>K | No |
ClinGen 1000Genomes gnomAD |
|
| TCGA novel | 160 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6199597 rs763140464 |
161 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6199598 rs764329686 |
161 | L>V | No |
ClinGen ExAC TOPMed |
|
|
rs111528463 CA6199596 |
162 | Q>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs200926517 CA6199595 |
163 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA381953957 rs1342637068 |
165 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1342637068 CA381953961 |
165 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA381953911 rs1161194141 |
168 | P>L | No |
ClinGen TOPMed |
|
|
rs1386913023 CA381953900 |
169 | F>V | No |
ClinGen TOPMed |
|
| TCGA novel | 170 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM1704414 CA6199591 rs771704708 |
173 | L>F | skin [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs774648141 CA224863041 |
174 | L>V | No |
ClinGen Ensembl |
|
|
CA6199590 rs761508312 |
175 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs774004001 CA6199589 |
177 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA6199588 rs573751380 |
177 | Y>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs748826662 CA6199587 |
178 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs966259294 CA224863002 |
183 | I>F | No |
ClinGen TOPMed |
|
|
rs866115482 CA224863001 |
184 | Y>D | No |
ClinGen TOPMed |
|
|
rs866115482 CA224863000 |
184 | Y>H | No |
ClinGen TOPMed |
|
|
COSM1704413 CA224862997 rs866983831 |
185 | S>F | skin [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
CA6199585 rs769819089 |
186 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6199584 rs745620337 |
187 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1010175382 CA224862986 |
188 | I>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1322785024 CA381953738 |
188 | I>S | No |
ClinGen TOPMed |
|
| TCGA novel | 190 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381953726 rs1244726108 |
190 | E>Q | No |
ClinGen TOPMed |
|
|
rs893167861 CA224862982 |
191 | K>R | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 192 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6199582 rs757541625 COSM1718941 |
192 | E>K | Variant assessed as Somatic; 0.0 impact. NS [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed |
|
rs757541625 CA6199583 |
192 | E>Q | No |
ClinGen ExAC TOPMed |
|
|
rs747172238 CA6199581 |
193 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778149172 CA6199580 |
193 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA381953700 rs1217289122 |
194 | L>M | No |
ClinGen Ensembl |
|
|
CA381953686 rs1264016549 |
196 | P>R | No |
ClinGen gnomAD |
|
|
CA6199579 rs758515411 COSM1704412 |
196 | P>S | Variant assessed as Somatic; 0.0 impact. skin [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
COSM690593 CA224862979 rs758515411 |
196 | P>T | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA6199576 rs755571919 |
200 | I>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs765626381 CA6199577 |
200 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs202124229 COSM1208082 CA6199575 |
202 | G>E | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA6199574 rs766670617 |
204 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA381953624 rs1304040487 |
206 | A>T | No |
ClinGen gnomAD |
|
|
rs773951482 CA6199572 |
207 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6199573 COSM932165 rs761030013 |
207 | P>S | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA381953607 rs1177388738 |
208 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1489203872 CA381953610 |
208 | M>R | No |
ClinGen TOPMed |
|
|
rs1245923357 CA381953568 |
213 | N>H | No |
ClinGen TOPMed |
|
|
rs922359069 CA224862733 |
214 | T>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA381953553 rs1342875100 |
215 | M>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1168510033 CA381953540 COSM1322148 |
216 | M>I | ovary Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA6199548 rs764748345 |
216 | M>K | No |
ClinGen ExAC gnomAD |
|
|
rs1450237225 CA381953545 |
216 | M>V | No |
ClinGen TOPMed |
|
|
rs1305577221 CA381953538 |
217 | S>P | No |
ClinGen gnomAD |
|
| TCGA novel | 217 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6199546 rs776658270 |
218 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs2729772 CA6199545 VAR_055872 |
220 | K>R | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA6199544 rs746765284 |
222 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773203343 CA6199543 |
223 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs1336021161 CA381953488 |
224 | H>R | No |
ClinGen gnomAD |
|
|
rs1433814117 CA381953490 |
224 | H>Y | No |
ClinGen TOPMed |
|
|
rs772183342 CA224862708 |
226 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6199542 rs772183342 |
226 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748337814 CA6199541 |
227 | H>P | No |
ClinGen ExAC gnomAD |
|
|
CA6199540 rs779019107 |
227 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs143383034 CA6199538 |
233 | I>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6199537 rs143383034 |
233 | I>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 234 | H>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs564499929 CA224862692 |
234 | H>R | No |
ClinGen 1000Genomes |
|
|
CA381953426 rs1177179230 |
234 | H>Y | No |
ClinGen gnomAD |
|
|
rs183523243 CA6199515 |
237 | Y>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA381952367 rs1163854133 |
238 | D>Y | No |
ClinGen TOPMed |
|
|
CA381952333 rs1392005701 |
240 | V>M | No |
ClinGen TOPMed |
|
|
CA6199514 rs116099947 |
241 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA381952288 rs1162191835 |
243 | L>V | No |
ClinGen gnomAD |
|
|
rs1565527559 CA381952271 |
244 | M>V | No |
ClinGen Ensembl |
|
|
rs770280041 CA381952255 |
245 | H>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770280041 CA6199513 |
245 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224858525 rs980681983 |
246 | D>E | No |
ClinGen Ensembl |
|
|
CA224858522 rs138651466 |
248 | D>G | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA381952095 rs1430050196 |
255 | I>T | No |
ClinGen TOPMed |
|
|
CA6199512 rs746306300 |
256 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs757589974 CA6199510 |
257 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA381952057 rs1357843102 |
257 | E>V | No |
ClinGen TOPMed |
|
|
CA6199509 rs751898495 |
260 | P>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1591553343 CA381952015 |
260 | P>S | No |
ClinGen Ensembl |
|
|
rs1180666702 CA381951998 |
261 | E>K | No |
ClinGen Ensembl |
|
|
CA6199508 rs778592601 |
262 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1443517794 CA381951970 |
263 | A>S | No |
ClinGen gnomAD |
|
| TCGA novel | 263 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381951956 rs1234434762 |
264 | C>S | No |
ClinGen TOPMed |
|
|
rs753398151 CA6199506 |
265 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM932164 rs1385264869 CA381951915 |
268 | A>V | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1167383424 CA381951903 |
269 | F>S | No |
ClinGen gnomAD |
|
|
CA381951856 rs1413709959 |
271 | N>K | No |
ClinGen gnomAD |
|
|
rs760278523 CA6199504 |
271 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA381951799 rs1284476471 |
274 | F>S | No |
ClinGen TOPMed |
|
|
rs1261092545 CA381951773 |
276 | S>A | No |
ClinGen gnomAD |
|
|
rs186975278 COSM3810470 COSM3810471 CA6199502 |
276 | S>L | breast [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
rs186975278 CA224858493 |
276 | S>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1320817316 CA381951731 |
279 | N>H | No |
ClinGen gnomAD |
|
|
CA6199499 rs768910308 |
280 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs763228399 CA6199498 |
281 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1277058019 CA381951686 |
282 | K>I | No |
ClinGen TOPMed gnomAD |
|
|
rs142086334 CA224858472 |
283 | W>R | No |
ClinGen ESP TOPMed |
|
|
rs1223546108 CA381951647 |
284 | F>Y | No |
ClinGen gnomAD |
|
|
CA6199497 rs775692591 |
286 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA224858468 rs754500221 |
287 | P>R | No |
ClinGen Ensembl |
|
|
rs1432854567 CA381949967 |
290 | R>K | No |
ClinGen gnomAD |
|
|
rs1565518859 CA381949944 |
291 | P>L | No |
ClinGen Ensembl |
|
|
rs762748425 CA6199479 |
291 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs775639161 CA6199478 |
293 | Y>D | No |
ClinGen ExAC gnomAD |
|
|
CA381949866 rs1483976364 |
295 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
CA381949860 rs1246468736 |
296 | K>E | No |
ClinGen TOPMed |
|
|
rs1208766502 CA381949856 |
296 | K>I | No |
ClinGen gnomAD |
|
|
rs878870688 CA224853390 |
303 | K>E | No |
ClinGen gnomAD |
|
|
rs1397096537 CA381949799 |
305 | R>G | No |
ClinGen gnomAD |
|
|
CA6199473 rs771451998 |
305 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6199471 rs747412510 |
306 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs773785529 CA6199470 |
307 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs1591542801 CA381949778 |
308 | N>S | No |
ClinGen Ensembl |
|
| TCGA novel | 309 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381949760 rs1417695563 |
311 | I>V | No |
ClinGen gnomAD |
|
|
CA6199468 rs748557699 |
312 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772519926 CA6199469 |
312 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs772519926 CA381949752 |
312 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs1425515918 CA381949744 |
313 | T>I | No |
ClinGen gnomAD |
|
|
rs376353628 CA6199467 |
314 | L>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1415823764 CA381949742 |
314 | L>V | No |
ClinGen TOPMed |
|
|
CA6199465 rs745372030 |
316 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1213985341 CA381949711 |
319 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs150358857 CA6199463 |
319 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6199464 rs150358857 |
319 | T>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs751394717 CA6199462 |
320 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1245927249 CA381949699 |
321 | A>G | No |
ClinGen gnomAD |
|
| TCGA novel | 323 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs764040453 CA6199461 |
324 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758148147 CA6199460 |
324 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA6199459 rs752527111 |
325 | R>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 325 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 325 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1341197942 CA381949660 |
327 | F>L | No |
ClinGen gnomAD |
|
|
CA381949653 rs1300337282 |
328 | V>M | No |
ClinGen gnomAD |
|
|
CA6199458 rs765419939 |
329 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1384479961 CA381949641 |
330 | F>I | No |
ClinGen gnomAD |
|
|
rs1384479961 CA381949640 |
330 | F>L | No |
ClinGen gnomAD |
|
|
CA6199457 rs759809373 |
332 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA381949624 rs759809373 |
332 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs371285012 CA381949616 |
333 | H>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371285012 CA6199456 |
333 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6199455 rs766316923 |
334 | R>C | No |
ClinGen ExAC gnomAD |
|
|
COSM932162 CA6199454 rs140271685 |
334 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs775715309 CA224853321 |
336 | P>A | No |
ClinGen Ensembl |
|
|
CA224853308 rs77289256 |
337 | P>Q | No |
ClinGen Ensembl |
|
|
rs773555890 CA6199452 |
339 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772747233 CA6199451 |
340 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1489671293 CA381949569 |
341 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA381949568 rs1489671293 |
341 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
CA381949572 rs1210817231 |
341 | L>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA224853301 rs1053492041 |
342 | R>T | No |
ClinGen Ensembl |
|
|
CA6199450 rs762247508 |
344 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs184766893 CA6199447 |
346 | V>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs552942099 CA6199446 |
347 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs151233592 CA6199444 |
347 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6199445 rs151233592 |
347 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6199442 rs746559076 |
350 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1325191871 CA381949508 |
351 | S>N | No |
ClinGen gnomAD |
|
|
rs532591376 CA6199440 |
352 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs532591376 CA6199439 |
352 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs778742764 CA6199438 |
353 | I>S | No |
ClinGen ExAC gnomAD |
|
|
CA6199437 rs368753721 |
355 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs766657500 CA224853262 |
358 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1416779487 CA381949442 |
359 | E>K | No |
ClinGen gnomAD |
|
|
rs1265670727 CA381949417 |
360 | Q>R | No |
ClinGen gnomAD |
|
|
CA381948740 rs1565517735 |
363 | I>T | No |
ClinGen Ensembl |
|
|
rs750526391 CA6199415 |
363 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1307054050 CA381948719 |
364 | F>L | No |
ClinGen gnomAD |
|
|
CA6199411 rs536599606 |
368 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1591541314 CA381948620 |
368 | A>V | No |
ClinGen Ensembl |
|
| TCGA novel | 369 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6199409 rs763195741 |
370 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6199407 rs201721341 |
371 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA381948521 rs1157380794 |
372 | Q>K | No |
ClinGen gnomAD |
|
|
CA381948473 rs139949435 |
373 | Y>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381948489 rs1323388324 |
373 | Y>H | No |
ClinGen TOPMed |
|
|
rs1238505155 CA381948482 |
373 | Y>S | No |
ClinGen gnomAD |
|
|
CA6199403 rs779270640 |
374 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA381948442 rs779270640 |
374 | V>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA381948366 rs1217596984 |
376 | S>F | No |
ClinGen gnomAD |
|
|
rs1451048684 CA381948361 |
377 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA381948324 rs1222948285 |
378 | A>G | No |
ClinGen gnomAD |
|
|
rs779968297 CA6199399 |
378 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381948313 rs1356984717 |
379 | P>S | No |
ClinGen gnomAD |
|
| TCGA novel | 382 | Q>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs11237146 VAR_055873 CA6199398 |
383 | H>Y | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1458435860 CA381948236 |
385 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs781587093 CA6199396 |
386 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757371607 CA6199395 |
386 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6199391 VAR_055874 rs11237145 |
390 | I>V | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1400430713 CA381948144 |
394 | A>P | No |
ClinGen gnomAD |
|
|
rs765567778 CA6199390 |
394 | A>V | No |
ClinGen ExAC gnomAD |
|
| VAR_064764 | 396 | N>K | No | UniProt | |
| TCGA novel | 396 | N>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA224852536 rs202143817 |
397 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6199387 rs202143817 |
397 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs947886229 CA224852522 |
398 | I>T | No |
ClinGen Ensembl |
|
|
rs767202060 CA6199385 |
399 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs767202060 CA381948112 |
399 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs761293382 CA6199384 |
400 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA6199383 rs139634188 |
401 | I>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6199382 rs139634188 |
401 | I>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs749182440 CA6199381 |
402 | N>K | No |
ClinGen ExAC |
|
|
CA6199379 rs775303267 |
403 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769582672 CA6199378 |
405 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769582672 CA381948070 |
405 | Y>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224852477 rs905222052 |
406 | K>R | No |
ClinGen TOPMed |
|
|
CA381948044 rs1278312176 |
409 | F>L | No |
ClinGen gnomAD |
|
|
CA6199376 rs781532010 |
410 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA381948018 rs1430537731 |
413 | L>I | No |
ClinGen gnomAD |
|
|
CA6199351 rs777867299 |
415 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA224841105 rs967400214 |
415 | D>G | No |
ClinGen TOPMed |
|
|
CA381946697 rs1479395337 |
415 | D>N | No |
ClinGen gnomAD |
|
|
CA224841101 rs79878697 |
416 | Y>* | No |
ClinGen Ensembl |
|
|
CA381946681 rs1210153282 |
416 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
CA381946683 rs1210153282 |
416 | Y>N | No |
ClinGen TOPMed gnomAD |
|
|
CA6199350 rs772138837 |
420 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs371398727 CA6199348 |
421 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1232649200 CA381946586 |
421 | I>S | No |
ClinGen gnomAD |
|
|
CA6199349 rs748220170 |
421 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA224841092 rs958817664 |
422 | H>R | No |
ClinGen TOPMed |
|
|
rs369003543 CA6199347 |
423 | I>T | No |
ClinGen ESP ExAC gnomAD |
|
|
CA224841086 rs949843019 |
424 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
rs949843019 CA381946541 |
424 | N>H | No |
ClinGen TOPMed gnomAD |
|
|
CA6199346 rs754200411 |
424 | N>I | No |
ClinGen ExAC gnomAD |
|
|
CA381946535 rs754200411 |
424 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA224841079 rs1034560793 COSM545159 |
425 | V>I | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA381946517 rs1034560793 |
425 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs751175673 CA381946471 |
427 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6199343 rs751175673 |
427 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6199340 rs752195288 |
428 | V>A | No |
ClinGen ExAC gnomAD |
|
|
COSM932159 rs762493323 CA6199341 |
428 | V>I | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA6199339 rs139880084 |
429 | N>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1025547832 CA224841066 |
429 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA381946396 rs1565511207 |
432 | W>* | No |
ClinGen Ensembl |
|
|
CA381946392 rs1591533199 |
433 | L>I | No |
ClinGen Ensembl |
|
|
rs372324659 CA6199337 |
434 | F>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1449975437 CA381946356 |
436 | L>M | No |
ClinGen TOPMed |
|
|
rs1332847069 CA381946348 |
437 | A>T | No |
ClinGen TOPMed |
|
|
rs1376974516 CA381946338 |
437 | A>V | No |
ClinGen TOPMed |
|
|
CA381946331 rs1209674531 |
438 | W>* | No |
ClinGen gnomAD |
|
|
rs770790218 CA224841057 |
439 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA6199336 rs770790218 |
439 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1287223546 CA381946294 |
440 | S>F | No |
ClinGen gnomAD |
|
|
rs370654020 CA224841055 |
441 | R>K | No |
ClinGen Ensembl |
|
|
rs1565511164 CA381946270 |
442 | I>N | No |
ClinGen Ensembl |
|
|
rs1565511160 CA381946244 |
444 | S>A | No |
ClinGen Ensembl |
|
|
CA6199335 rs760406032 |
444 | S>L | No |
ClinGen ExAC |
|
|
CA381946227 rs1315674163 |
445 | V>E | No |
ClinGen gnomAD |
|
|
CA6199334 rs116543089 |
446 | T>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs377106981 CA224841044 |
449 | N>D | No |
ClinGen Ensembl |
|
|
CA224841041 rs373177608 |
450 | I>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs373177608 COSM1357099 CA6199333 |
450 | I>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA381946145 rs1311335578 |
452 | L>I | No |
ClinGen TOPMed gnomAD |
|
|
CA224841038 rs111993216 |
452 | L>P | No |
ClinGen Ensembl |
|
|
rs779034959 CA6199331 |
457 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs779034959 CA381946095 |
457 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1299825846 CA381946079 |
458 | H>D | No |
ClinGen gnomAD |
|
|
rs1466393011 CA381946056 |
459 | P>H | No |
ClinGen gnomAD |
|
|
rs768728022 CA381946039 |
461 | F>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768728022 CA6199330 |
461 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6199329 rs749738554 |
463 | M>V | No |
ClinGen ExAC TOPMed |
|
|
rs1462974713 CA381945666 |
464 | T>I | No |
ClinGen gnomAD |
|
|
CA6199313 rs774569925 |
465 | P>Q | No |
ClinGen ExAC gnomAD |
|
|
rs761877243 COSM932158 CA6199314 |
465 | P>S | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA381945641 rs1207613176 |
466 | K>T | No |
ClinGen TOPMed |
|
|
CA381945569 rs1427159980 |
468 | Y>* | No |
ClinGen TOPMed gnomAD |
|
|
CA6199310 rs116135386 |
468 | Y>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs768674618 CA6199311 |
468 | Y>N | No |
ClinGen ExAC gnomAD |
|
|
rs1261513717 CA381945514 |
470 | F>L | No |
ClinGen gnomAD |
|
|
CA381945464 rs1248464121 |
472 | W>C | No |
ClinGen TOPMed |
|
|
rs775943831 CA6199309 |
474 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381945398 rs1591530362 |
476 | D>G | No |
ClinGen Ensembl |
|
|
CA6199307 rs746230267 |
477 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA6199308 rs770251628 |
477 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1318684447 CA381945352 |
478 | I>F | No |
ClinGen gnomAD |
|
|
CA6199304 rs548426468 |
484 | V>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs548426468 CA6199303 |
484 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs932876048 CA224839674 |
485 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
CA224839672 rs932876048 |
485 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA6199302 rs531524366 |
485 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1442752977 CA381945214 |
486 | I>M | No |
ClinGen gnomAD |
|
|
rs1483795481 CA381945218 |
486 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1301740319 CA381945226 |
486 | I>V | No |
ClinGen gnomAD |
|
|
CA381945160 rs1169574967 |
488 | C>F | No |
ClinGen TOPMed |
|
|
CA6199301 rs754494317 |
489 | F>I | No |
ClinGen ExAC gnomAD |
|
|
rs1465741365 CA381945124 |
490 | H>N | No |
ClinGen gnomAD |
|
|
rs76566721 CA6199300 |
490 | H>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA381945097 rs1165613339 |
491 | W>* | No |
ClinGen gnomAD |
|
|
rs771147328 CA6199286 |
492 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs549224703 CA6199287 |
492 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA381944107 rs1179752882 |
494 | E>D | No |
ClinGen gnomAD |
|
| TCGA novel | 498 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6199285 rs747406984 |
499 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA6199284 rs138522428 |
500 | L>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1480655008 CA381943969 |
503 | T>A | No |
ClinGen TOPMed |
|
|
CA381943965 rs1279372691 |
503 | T>I | No |
ClinGen gnomAD |
|
|
CA381943973 rs1480655008 |
503 | T>P | No |
ClinGen TOPMed |
|
|
CA224839046 rs1007397666 |
506 | T>I | No |
ClinGen TOPMed |
|
|
rs201940142 CA6199282 |
507 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6199281 rs748805250 |
507 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA6199280 rs779369052 |
508 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs200415079 CA6199244 |
510 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs115620947 CA6199242 |
510 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA381941239 rs1192146532 |
512 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA6199223 rs748243492 |
515 | L>M | No |
ClinGen TOPMed |
|
|
CA381941150 rs1157300971 |
516 | H>P | No |
ClinGen TOPMed |
|
|
CA6199220 rs746890970 |
517 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1467669282 CA381941136 |
518 | A>D | No |
ClinGen gnomAD |
|
|
CA381941137 rs1304385614 |
518 | A>S | No |
ClinGen gnomAD |
|
|
COSM3810469 rs867036924 CA224832335 |
519 | M>I | breast [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
CA381941132 rs1232985113 |
519 | M>V | No |
ClinGen gnomAD |
|
|
CA6199219 rs760740438 |
521 | P>H | No |
ClinGen ExAC gnomAD |
|
|
CA6199218 rs575479337 |
522 | P>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA381941105 rs1565500524 |
523 | V>L | No |
ClinGen Ensembl |
|
|
CA6199215 rs182145737 |
524 | R>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6199214 rs200939714 |
524 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381941093 rs200939714 |
524 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200939714 CA6199213 |
524 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6199212 rs766512814 |
525 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1298837911 CA381941075 |
526 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA6199210 rs374945069 |
528 | G>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6199211 rs374945069 |
528 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 529 | P>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs534624865 CA224832285 |
530 | W>G | No |
ClinGen gnomAD |
|
|
CA6199209 rs768180077 |
531 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs1171478199 CA381940982 |
533 | A>T | No |
ClinGen gnomAD |
|
|
CA6199207 rs774838250 |
536 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA6199206 rs764790482 |
537 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6199204 rs770378196 |
538 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA6199203 rs770378196 |
538 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA381940898 rs1211120453 |
539 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA381940887 rs773098667 |
540 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381940885 rs773098667 |
540 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6199201 rs773098667 |
540 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747880119 CA6199199 |
541 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA381940869 rs1308329915 |
541 | K>R | No |
ClinGen gnomAD |
|
|
rs778704867 CA6199198 |
542 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA381940789 rs749481620 |
546 | H>P | No |
ClinGen ExAC gnomAD |
|
|
rs749481620 CA6199196 |
546 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs780459031 CA6199194 |
547 | Q>E | No |
ClinGen ExAC |
|
|
rs750581213 CA6199192 |
547 | Q>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750581213 CA6199193 |
547 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381940759 rs1433865036 |
549 | H>Y | No |
ClinGen gnomAD |
|
|
rs1427658595 CA381940749 |
550 | F>S | No |
ClinGen TOPMed |
|
|
rs146028525 CA6199191 |
551 | N>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA381940742 rs1172650007 |
551 | N>S | No |
ClinGen TOPMed |
|
|
rs61900040 CA224832207 |
553 | A>E | No |
ClinGen gnomAD |
|
|
rs61900040 CA381940727 |
553 | A>G | No |
ClinGen gnomAD |
|
|
CA6199190 rs142599319 |
555 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA224832195 rs966126546 |
557 | K>N | No |
ClinGen Ensembl |
|
|
CA381940697 rs1308054428 |
558 | K>T | No |
ClinGen TOPMed |
|
|
CA6199187 rs763248696 |
559 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs776222639 CA6199186 |
561 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs760152970 CA6199184 |
562 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA381940678 rs1218518647 |
562 | I>V | No |
ClinGen gnomAD |
|
|
rs1287831586 CA381940667 |
563 | K>R | No |
ClinGen gnomAD |
|
|
CA381940630 rs1289780588 |
565 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA6199182 rs552616366 |
566 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs552616366 CA224832176 |
566 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1230775366 CA381940618 |
567 | T>A | No |
ClinGen TOPMed |
|
|
CA381940600 rs1395291772 |
568 | P>S | No |
ClinGen gnomAD |
|
|
CA6199179 rs774181451 |
569 | L>S | No |
ClinGen ExAC |
|
|
rs749077948 CA6199177 |
570 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs1237821733 CA381940575 |
570 | K>Q | No |
ClinGen gnomAD |
|
|
rs768462644 CA6199178 |
570 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6199174 rs745940525 |
571 | P>H | No |
ClinGen ExAC |
|
|
rs770201522 CA6199175 |
571 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770201522 CA6199176 |
571 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6199171 rs778174777 |
572 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA381940546 rs1462552895 |
572 | G>S | No |
ClinGen gnomAD |
|
|
rs778174777 CA6199170 |
572 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs1262901695 CA381940513 |
574 | H>N | No |
ClinGen gnomAD |
|
|
CA381940507 rs1402867285 |
574 | H>P | No |
ClinGen gnomAD |
|
|
CA6199168 rs753105823 |
574 | H>Q | No |
ClinGen ExAC TOPMed |
|
|
CA6199167 rs765999450 |
575 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1214459682 CA381940463 |
577 | Q>* | No |
ClinGen gnomAD |
|
|
rs1591519969 CA381940454 |
577 | Q>H | No |
ClinGen Ensembl |
|
|
rs1214459682 CA381940467 |
577 | Q>K | No |
ClinGen gnomAD |
|
|
rs1168755348 CA381940460 |
577 | Q>P | No |
ClinGen TOPMed |
|
|
rs567456494 CA6199165 |
579 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381940403 rs1350361785 |
581 | P>S | No |
ClinGen TOPMed |
|
|
rs1003796012 CA224832091 |
583 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA381940352 rs1369134314 |
585 | F>S | No |
ClinGen TOPMed |
|
|
CA224832086 rs868775509 |
587 | L>F | No |
ClinGen Ensembl |
|
|
CA381940281 rs1364458413 |
591 | P>A | No |
ClinGen gnomAD |
|
|
rs767007104 CA6199163 |
591 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA381940278 rs767007104 |
591 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA6199162 rs761263978 |
593 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs551793548 CA224832070 |
593 | R>S | No |
ClinGen 1000Genomes |
|
|
rs1391608250 CA381940265 |
594 | Q>E | No |
ClinGen gnomAD |
|
|
rs897181452 CA224832068 |
594 | Q>R | No |
ClinGen Ensembl |
|
|
CA381940252 rs1045514108 |
596 | T>A | No |
ClinGen TOPMed |
|
|
CA381940249 rs1466008447 |
596 | T>I | No |
ClinGen TOPMed |
|
|
CA381940250 rs1466008447 |
596 | T>R | No |
ClinGen TOPMed |
|
|
rs1045514108 CA224832066 |
596 | T>S | No |
ClinGen TOPMed |
|
|
CA381940241 rs1188782974 |
597 | S>R | No |
ClinGen TOPMed |
|
|
rs1241113880 CA381940229 |
599 | A>V | No |
ClinGen TOPMed |
|
|
CA381940225 rs1412972540 |
600 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs774317564 CA6199161 |
600 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs373698539 CA224832062 |
602 | Q>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs374953992 CA224832059 |
603 | T>S | No |
ClinGen gnomAD |
|
|
CA224832056 rs1005595817 |
605 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA224832053 rs888508704 |
608 | L>P | No |
ClinGen Ensembl |
|
|
rs1048894645 CA224832051 |
609 | K>M | No |
ClinGen Ensembl |
|
|
rs12363944 CA6199159 |
610 | V>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA381940162 rs1435479943 |
610 | V>M | No |
ClinGen TOPMed |
|
|
rs900318137 CA224832043 |
615 | M>I | No |
ClinGen Ensembl |
|
|
rs566677854 CA224832042 |
616 | P>S | No |
ClinGen Ensembl |
|
|
rs1340333337 CA381940089 |
617 | S>F | No |
ClinGen gnomAD |
|
|
rs1248305969 CA381940063 |
620 | V>I | No |
ClinGen Ensembl |
|
|
rs909209084 CA224832025 |
622 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA381940028 rs1368633125 |
623 | P>S | No |
ClinGen gnomAD |
No associated diseases with Q6W3E5
1 regional properties for Q6W3E5
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Glycerophosphodiester phosphodiesterase domain | 198 - 457 | IPR030395 |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| glycerophosphodiester phosphodiesterase activity | Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate. |
| metal ion binding | Binding to a metal ion. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| lipid metabolic process | The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9SD81 | GDPD6 | Glycerophosphodiester phosphodiesterase GDPD6 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MLLFLWIETS | SEYFNFDWVT | FLGTGYWFFW | SIFILSLARI | LTAYSSLLLL | LGFLLLWERI |
| 70 | 80 | 90 | 100 | 110 | 120 |
| ELYLHLCHKI | LILLVILLCV | ILMFIICKFW | KERWLVAGLS | MQIFAPYVHL | VSITVMVILF |
| 130 | 140 | 150 | 160 | 170 | 180 |
| WPVAFYVACL | EREVRMRRYR | MTHSEKKRLK | QCNVITRLRG | LQVPVGLPFL | LILLGLYLMP |
| 190 | 200 | 210 | 220 | 230 | 240 |
| LGIYSPCIQE | KENLGPKPTI | FGHRGAPMLG | PENTMMSFEK | AVEHGAHGLE | TDIHLSYDHV |
| 250 | 260 | 270 | 280 | 290 | 300 |
| PFLMHDFDLK | RTTNIGEVQP | ESACENPAFF | NWDFLSTLNA | GKWFVKPELR | PFYNMKPLSE |
| 310 | 320 | 330 | 340 | 350 | 360 |
| ADKERARNQS | IPTLADLLTL | AEKERKFVIF | DLHRPPPKHP | LRHTFVRQVV | SVILASKIEQ |
| 370 | 380 | 390 | 400 | 410 | 420 |
| HLIFWLPAHD | RQYVRSVAPG | FQHVGRLVSI | ETLAKNNISI | INVDYKKLFP | NGLRDYKAAN |
| 430 | 440 | 450 | 460 | 470 | 480 |
| IHINVYTVNE | PWLFSLAWCS | RINSVTTDNI | GLLSQLDHPH | FFMTPKFYVF | MWLLADIISV |
| 490 | 500 | 510 | 520 | 530 | 540 |
| LFIVAIFCFH | WRRETEKEKL | FETSSTRTDT | QSGNLHIAMK | PPVRVVEGPW | TLAALYPALP |
| 550 | 560 | 570 | 580 | 590 | 600 |
| KSGKEHQGHF | NFAAPSKKLL | PIKNAVTPLK | PGKHEIQPPM | PTVVFELTQA | PTRQATSEAT |
| 610 | 620 | ||||
| FQTTLPTLKV | DKPTMPSIEV | PYP |