Q6NXP2
Gene name |
GARIN1A |
Protein name |
Golgi-associated RAB2 interactor protein 1A |
Names |
|
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:346653 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q6NXP2
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q6NXP2-F1 | Predicted | AlphaFoldDB |
292 variants for Q6NXP2
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs1431074326 CA369162220 |
2 | S>N | No |
ClinGen gnomAD |
|
|
rs781488769 CA4471913 |
3 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369162252 rs1418506501 |
3 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs74343948 CA4471914 |
4 | I>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs756423259 CA4471915 |
5 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA166187807 rs201001344 |
6 | G>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA369162287 rs1437013441 |
6 | G>R | No |
ClinGen gnomAD |
|
|
CA4471916 rs201001344 |
6 | G>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1311685226 CA369162325 |
8 | P>L | No |
ClinGen gnomAD |
|
|
rs1385274098 CA369162317 |
8 | P>T | No |
ClinGen gnomAD |
|
|
CA369162363 rs1334403184 |
10 | E>G | No |
ClinGen TOPMed |
|
|
CA166187838 rs1010663155 |
11 | V>I | No |
ClinGen TOPMed |
|
|
CA369162395 rs1284596759 |
13 | E>K | No |
ClinGen gnomAD |
|
|
CA166187839 rs995221183 |
18 | V>A | No |
ClinGen Ensembl |
|
|
rs1265195518 CA369162539 |
21 | G>E | No |
ClinGen gnomAD |
|
|
CA166187846 rs1026242310 |
21 | G>R | No |
ClinGen Ensembl |
|
|
rs1180150439 CA369162549 |
22 | V>E | No |
ClinGen gnomAD |
|
|
CA4471919 rs773021425 |
23 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs746478901 CA4471920 |
24 | N>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 24 | N>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs770487374 CA4471923 |
26 | L>P | No |
ClinGen ExAC gnomAD |
|
| rs777765887 | 27 | L>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs776418779 CA4471924 |
27 | L>P | No |
ClinGen ExAC |
|
|
CA369162616 rs1163854558 |
29 | Q>* | No |
ClinGen gnomAD |
|
|
CA369162621 rs1347931713 |
29 | Q>H | No |
ClinGen gnomAD |
|
|
rs1377928614 CA369162648 |
32 | H>D | No |
ClinGen gnomAD |
|
|
CA369162818 rs1307149322 |
34 | P>L | No |
ClinGen gnomAD |
|
|
rs976537921 CA166187896 |
34 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs200331102 CA166187899 |
37 | N>K | No |
ClinGen Ensembl |
|
|
rs1229428139 CA369162867 |
38 | L>F | No |
ClinGen gnomAD |
|
|
CA4471927 rs764908789 |
38 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA369162904 rs1200838954 |
41 | N>I | No |
ClinGen gnomAD |
|
|
rs1200838954 CA369162902 |
41 | N>S | No |
ClinGen gnomAD |
|
|
rs764257553 CA4471930 |
42 | S>A | No |
ClinGen ExAC gnomAD |
|
|
rs751780919 CA4471931 |
42 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369162911 rs764257553 |
42 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA166187961 rs201378634 |
44 | V>A | No |
ClinGen 1000Genomes ExAC TOPMed |
|
|
CA4471933 rs201378634 |
44 | V>G | No |
ClinGen 1000Genomes ExAC TOPMed |
|
|
CA166187977 rs1029480805 |
45 | F>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1472816271 CA369162956 |
46 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA369162982 rs1181229931 |
48 | N>S | No |
ClinGen gnomAD |
|
|
rs750893358 CA4471934 |
50 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs1171112884 CA369163013 |
50 | I>N | No |
ClinGen gnomAD |
|
|
rs750893358 CA369163004 |
50 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA369163027 rs1465270575 |
51 | Q>* | No |
ClinGen gnomAD |
|
|
rs762666304 CA369163651 |
52 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4471949 rs762666304 |
52 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4471950 rs371349327 |
53 | H>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA166190401 rs967687801 |
53 | H>R | No |
ClinGen Ensembl |
|
| TCGA novel | 56 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs767467286 CA4471953 |
56 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs750566579 CA369163747 |
57 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4471954 rs750566579 |
57 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1262314654 CA369163787 |
59 | F>C | No |
ClinGen gnomAD |
|
|
CA4471955 rs760693626 |
61 | V>F | No |
ClinGen ExAC gnomAD |
|
|
rs755380212 CA4471958 |
65 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369163875 rs1172108213 |
66 | N>S | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 67 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4471959 rs192205091 |
67 | W>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs751139306 CA4471960 |
68 | R>K | No |
ClinGen ExAC |
|
|
rs371977746 CA4471961 |
69 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA4471963 rs184412982 |
70 | V>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4471962 rs549536126 |
70 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA166190458 rs1004531268 |
71 | C>* | No |
ClinGen TOPMed |
|
|
rs769294197 CA4471964 |
73 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4471965 rs779905927 |
75 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA4471966 rs749283671 |
76 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs562611087 CA4471967 |
77 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1378489956 CA369164094 |
78 | I>V | No |
ClinGen gnomAD |
|
|
CA369164116 rs1285301246 |
79 | L>F | No |
ClinGen gnomAD |
|
|
CA369164138 rs1218079098 |
80 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
CA166190546 rs888476392 CA166190545 |
80 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA4471970 rs772289999 |
81 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369164147 rs772289999 |
81 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1476956344 CA369164166 |
82 | T>I | No |
ClinGen TOPMed |
|
|
rs1584931494 CA369164154 |
82 | T>P | No |
ClinGen Ensembl |
|
|
CA4471973 rs766580474 |
83 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4471974 rs754390092 |
84 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754390092 CA166190579 |
84 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4471976 rs201441699 |
87 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA4471978 rs758717361 |
92 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 92 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4471979 rs758717361 |
92 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750053765 CA4471981 |
93 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1333945996 CA369164291 |
94 | L>F | No |
ClinGen gnomAD |
|
|
rs376623632 CA166190602 |
96 | M>T | No |
ClinGen ESP TOPMed |
|
|
rs1246935049 CA369164321 |
97 | A>T | No |
ClinGen gnomAD |
|
|
CA4471983 rs779609160 |
97 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA4471984 rs749197422 |
98 | N>H | No |
ClinGen ExAC |
|
|
rs1283018373 CA369164340 |
98 | N>S | No |
ClinGen TOPMed |
|
|
rs1207774597 CA369164371 |
100 | T>I | No |
ClinGen gnomAD |
|
|
rs754961963 CA4471986 |
102 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA369164412 rs1229573842 |
103 | Q>H | No |
ClinGen Ensembl |
|
|
CA369164423 rs1199395290 |
104 | G>A | No |
ClinGen gnomAD |
|
|
rs1237680642 CA369164432 |
105 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1417351120 CA369164435 |
105 | P>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA369164434 rs1237680642 |
105 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1035299828 CA166190630 |
107 | T>A | No |
ClinGen Ensembl |
|
|
rs771770491 CA166190637 |
107 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771770491 CA4471989 |
107 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200234987 CA166190646 |
109 | W>* | No |
ClinGen Ensembl |
|
|
VAR_037267 CA4471990 rs17169357 |
112 | P>T | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA4471992 rs747300755 |
113 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4471991 rs747300755 |
113 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
VAR_037268 rs6971819 CA4471993 |
114 | D>V | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA369164555 rs1393719693 |
115 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
rs879682991 CA4471995 |
115 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs765795045 CA4471997 |
116 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs775861106 CA4471998 |
116 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs1231281577 CA369164582 |
118 | I>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1318287728 CA369164588 |
119 | N>D | No |
ClinGen gnomAD |
|
|
CA4472001 rs375136720 |
119 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs755805956 CA4472003 |
121 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA369165021 TCGA novel rs1277562384 |
122 | R>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen TOPMed |
| TCGA novel | 124 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA369165097 rs1418934353 |
125 | P>S | No |
ClinGen gnomAD |
|
| TCGA novel | 126 | L>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1303499849 CA369165134 |
126 | L>V | No |
ClinGen TOPMed |
|
|
CA4472042 rs757118745 |
127 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA4472043 rs201240369 |
128 | Y>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1370351243 CA369165200 |
129 | V>E | No |
ClinGen gnomAD |
|
|
CA4472045 rs769910752 |
129 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369165226 rs1288864938 |
130 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA4472046 rs780040728 |
130 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369165233 rs1355033625 |
131 | L>Q | No |
ClinGen gnomAD |
|
|
CA166192412 rs1052231589 |
132 | R>* | No |
ClinGen TOPMed |
|
|
rs749783143 CA369165246 |
132 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749783143 CA4472047 |
132 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs181109862 CA4472049 |
134 | Y>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs181109862 CA4472048 |
134 | Y>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA369165301 rs1489644213 |
135 | D>N | No |
ClinGen gnomAD |
|
|
CA4472051 rs186458943 |
136 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4472050 rs6467210 VAR_037269 |
136 | R>W | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1584935643 CA369165381 |
138 | Q>* | No |
ClinGen Ensembl |
|
|
CA369165391 rs1179961917 |
138 | Q>H | No |
ClinGen gnomAD |
|
|
rs1584935653 CA369165382 |
138 | Q>P | No |
ClinGen Ensembl |
|
|
rs776255301 CA4472052 |
139 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4472053 rs531576408 |
139 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4472054 rs764781019 |
140 | I>F | No |
ClinGen ExAC gnomAD |
|
|
CA369165445 rs1563093655 |
142 | R>M | No |
ClinGen Ensembl |
|
|
rs1458165865 CA369165472 |
144 | R>K | No |
ClinGen gnomAD |
|
|
CA4472056 rs762556424 |
146 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369165517 rs1362414509 |
147 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA369165540 rs1254155090 |
148 | E>D | No |
ClinGen TOPMed |
|
|
CA4472058 rs200938500 |
148 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA166192493 rs1014236879 |
149 | K>N | No |
ClinGen TOPMed |
|
|
rs1046174394 CA166192497 |
150 | I>F | No |
ClinGen TOPMed gnomAD |
|
|
CA369165556 rs1046174394 |
150 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs781197315 CA4472060 |
151 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs372599605 CA4472063 |
152 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372599605 CA4472062 |
152 | Y>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1374865079 CA369165629 |
153 | L>Q | No |
ClinGen TOPMed |
|
|
rs749291100 CA4472064 |
153 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA166192515 rs571067980 |
155 | L>H | No |
ClinGen 1000Genomes |
|
|
CA166192525 rs768787544 |
156 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs553880583 CA4472066 |
157 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs748714129 CA4472067 |
158 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA369165772 rs1405043883 |
159 | H>R | No |
ClinGen TOPMed |
|
|
rs1175420643 CA369165793 |
161 | E>K | No |
ClinGen gnomAD |
|
|
CA4472068 rs772423422 |
162 | I>F | No |
ClinGen ExAC gnomAD |
|
|
CA369165858 rs1171301233 |
162 | I>T | No |
ClinGen TOPMed |
|
|
CA4472069 rs773614211 |
163 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA4472070 rs761122140 |
164 | F>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 165 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4472071 rs769291032 |
166 | F>V | No |
ClinGen ExAC gnomAD |
|
|
CA369166110 rs1284485592 |
169 | R>C | No |
ClinGen gnomAD |
|
|
CA4472072 rs377562102 |
169 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA369166276 rs1297032662 |
175 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
CA369166293 rs1381958352 |
176 | K>Q | No |
ClinGen gnomAD |
|
|
CA369166310 rs1229304049 |
176 | K>R | No |
ClinGen gnomAD |
|
|
CA4472077 rs199592994 |
177 | G>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 177 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4472076 rs199592994 |
177 | G>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs969739917 CA166192632 |
180 | I>V | No |
ClinGen Ensembl |
|
|
rs201533178 CA4472079 |
182 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1288730925 CA369166561 |
184 | D>V | No |
ClinGen gnomAD |
|
|
CA4472080 rs766449722 |
185 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA4472082 rs554571321 |
186 | R>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs779032793 CA4472083 |
188 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1351241491 CA369166650 |
189 | F>L | No |
ClinGen TOPMed |
|
|
CA369166656 rs1478648479 |
190 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1478648479 CA369166655 |
190 | T>P | No |
ClinGen TOPMed gnomAD |
|
|
CA4472084 rs748624402 |
190 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA166192682 rs914063241 |
192 | C>F | No |
ClinGen Ensembl |
|
|
rs79425518 CA166192676 |
192 | C>G | No |
ClinGen 1000Genomes |
|
|
rs1020657862 CA166192692 |
193 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA166192700 rs945491450 |
196 | K>Q | No |
ClinGen Ensembl |
|
|
CA4472087 rs747269571 |
200 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs778282553 CA4472086 |
200 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 203 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA369168001 rs1240573260 |
208 | N>H | No |
ClinGen TOPMed |
|
|
rs1367702425 CA369168032 |
209 | S>C | No |
ClinGen gnomAD |
|
|
rs1420240519 CA369168057 |
210 | L>V | No |
ClinGen gnomAD |
|
|
rs1355744503 CA369168181 |
213 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1584940252 CA369168173 |
213 | S>P | No |
ClinGen Ensembl |
|
|
rs1355744503 CA369168179 |
213 | S>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs368932053 CA4472105 |
215 | Q>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs368932053 CA369168227 |
215 | Q>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA369168286 rs1213923857 |
216 | P>L | No |
ClinGen gnomAD |
|
|
rs1445021791 CA369168275 |
216 | P>S | No |
ClinGen gnomAD |
|
|
CA369168313 rs983045606 CA166194635 |
217 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs757554559 CA166194652 |
218 | E>* | No |
ClinGen ExAC gnomAD |
|
|
CA4472108 rs748867865 |
218 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA4472106 rs757554559 |
218 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA4472107 rs757554559 |
218 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA369168379 rs1442055406 |
219 | P>L | No |
ClinGen gnomAD |
|
|
rs1393858272 CA369168368 |
219 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs149791707 CA4472109 |
220 | L>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4472112 rs375215194 |
221 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4472111 rs375215194 |
221 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1439586624 CA369168512 |
224 | A>T | No |
ClinGen gnomAD |
|
|
CA4472113 rs367837931 |
224 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1240818543 CA369168553 |
225 | A>G | No |
ClinGen gnomAD |
|
|
CA4472115 rs770603217 |
225 | A>S | No |
ClinGen ExAC |
|
|
rs776540957 CA4472116 |
226 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA369168576 rs1278827630 |
226 | E>Q | No |
ClinGen gnomAD |
|
|
rs1211404063 CA369168607 |
227 | Q>K | No |
ClinGen gnomAD |
|
|
CA4472118 rs368251376 |
230 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs759355770 CA4472117 |
230 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA166194773 rs77491733 |
231 | S>R | No |
ClinGen Ensembl |
|
|
rs371631002 CA4472119 |
231 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA166194774 rs1043279823 |
233 | S>* | No |
ClinGen TOPMed |
|
|
CA166194780 rs375045908 |
234 | Q>R | No |
ClinGen ESP gnomAD |
|
|
CA166194781 rs903483380 |
235 | L>F | No |
ClinGen TOPMed |
|
|
rs1468979591 CA369168874 |
237 | G>E | No |
ClinGen gnomAD |
|
|
CA4472121 rs764297522 |
237 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4472122 rs574749545 |
238 | K>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs369264778 CA166194786 |
240 | Q>H | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs757828998 CA4472123 |
242 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA369169058 rs757828998 |
242 | T>R | No |
ClinGen ExAC gnomAD |
|
|
rs1157330358 CA369169139 |
245 | R>K | No |
ClinGen TOPMed |
|
|
rs759267839 CA4472134 |
246 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs879580795 CA166196748 |
248 | D>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA369170343 rs1462100522 |
249 | T>A | No |
ClinGen gnomAD |
|
|
CA369170348 rs1462100522 |
249 | T>P | No |
ClinGen gnomAD |
|
|
CA369170402 rs1166782051 |
250 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
VAR_037270 CA4472136 rs1109552 |
251 | I>V | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1313360581 CA369170507 |
253 | I>T | No |
ClinGen gnomAD |
|
|
rs763198932 CA4472137 |
254 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4472138 rs764054595 |
256 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374335078 CA4472139 |
257 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs988315089 CA166196797 |
259 | Y>C | No |
ClinGen gnomAD |
|
|
CA166196800 rs761832287 |
260 | K>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761832287 CA4472140 |
260 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369170777 rs1404824849 |
260 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA369170790 rs1563098294 |
261 | I>M | No |
ClinGen Ensembl |
|
|
CA4472141 rs527913836 |
261 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs750984901 CA4472142 |
262 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA4472144 rs756538523 |
263 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA4472145 rs780632782 |
264 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs549582682 CA4472146 |
266 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA369170937 rs1264942357 |
269 | I>V | No |
ClinGen gnomAD |
|
|
rs758120979 CA4472147 |
271 | L>* | No |
ClinGen ExAC gnomAD |
|
|
CA369171015 rs1370864794 |
271 | L>F | No |
ClinGen gnomAD |
|
|
rs1333030348 CA369171022 |
272 | N>H | No |
ClinGen gnomAD |
|
|
CA4472149 rs777315740 |
274 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs756731011 CA4472150 |
274 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA4472148 rs777315740 |
274 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA369171173 rs1299777518 |
275 | M>I | No |
ClinGen gnomAD |
|
|
rs183291220 CA4472151 |
275 | M>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA369171195 rs201007599 |
276 | R>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4472152 rs201007599 |
276 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA369171206 CA4472153 rs769543432 |
276 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs79412392 CA166196868 |
280 | S>T | No |
ClinGen Ensembl |
|
|
CA369171346 rs1295056566 |
282 | S>G | No |
ClinGen gnomAD |
|
| TCGA novel | 282 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4472154 rs775310075 |
283 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1304878087 CA369171394 |
284 | W>* | No |
ClinGen gnomAD |
|
|
CA369171448 rs1209225698 |
286 | Q>* | No |
ClinGen gnomAD |
|
|
CA369171478 rs1486368659 |
287 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
rs774443286 CA4472157 |
288 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768885857 CA4472156 |
288 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1434459130 CA369171562 |
289 | W>C | No |
ClinGen gnomAD |
|
|
rs370836694 CA166196883 |
289 | W>R | No |
ClinGen ESP |
|
|
CA4472158 rs761898770 |
290 | N>H | No |
ClinGen ExAC gnomAD |
|
|
CA4472159 rs767555244 |
292 | H>N | No |
ClinGen ExAC gnomAD |
|
|
CA369171646 rs1364657803 |
292 | H>R | No |
ClinGen TOPMed |
|
|
CA166196910 rs749074784 |
295 | Q>* | No |
ClinGen Ensembl |
|
| TCGA novel | 296 | V>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1452704559 CA369171772 |
297 | H>L | No |
ClinGen gnomAD |
|
|
rs1305447374 CA369171796 |
298 | I>T | No |
ClinGen gnomAD |
|
|
rs1288582764 CA369171790 |
298 | I>V | No |
ClinGen gnomAD |
|
| TCGA novel | 300 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs374144352 CA4472162 |
301 | Y>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA369171871 rs1443253902 |
302 | L>V | No |
ClinGen gnomAD |
|
|
rs754208038 CA4472163 |
303 | G>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 304 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4472165 rs763743585 |
305 | H>P | No |
ClinGen ExAC gnomAD |
|
|
rs1317902655 CA369171951 |
305 | H>Q | No |
ClinGen gnomAD |
|
|
rs1213887539 CA369172034 |
308 | G>* | No |
ClinGen gnomAD |
|
|
rs763351301 CA166196927 |
308 | G>E | No |
ClinGen Ensembl |
|
|
CA4472167 rs756787359 |
309 | A>T | No |
ClinGen ExAC gnomAD |
No associated diseases with Q6NXP2
1 regional properties for Q6NXP2
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Golgi associated RAB2 interactor protein-like, Rab2B-binding domain | 118 - 185 | IPR022168 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| Golgi apparatus | A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| acrosome assembly | The formation of the acrosome from the spermatid Golgi. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSKIRGLPPE | VREPGPGVEL | GVENGLLCQL | IHSPEFNLFS | NSVVFESNFI | QTHVPEADFQ |
| 70 | 80 | 90 | 100 | 110 | 120 |
| VTKPGNWRDV | CEGSATVILG | VTSSVPSLPL | PNVLLMANVT | WPQGPFTTWS | TPGDAPVINL |
| 130 | 140 | 150 | 160 | 170 | 180 |
| SRLLPLKYVE | LRIYDRLQRI | LRVRTVTEKI | YYLKLHEKHP | EIVFQFWVRL | VKILQKGLSI |
| 190 | 200 | 210 | 220 | 230 | 240 |
| TTKDPRIKFT | HCLVPKMPTN | STETTPENSL | LSSPQPSEPL | VLLAAEQTSG | SFSQLSGKPQ |
| 250 | 260 | 270 | 280 | 290 | 300 |
| LTADRNNDTA | IEIDNCSSYK | IPSPVASPIN | LNIPMRAALS | HSLWEQEDWN | EHLLQVHIAS |
| YLGEHFLGA |