Q5VPE5
Gene name |
HOX28 (Os06g0140400, LOC_Os06g04850, OsJ_019259, OSJNBa0041F13.45) |
Protein name |
Homeobox-leucine zipper protein HOX28 |
Names |
HD-ZIP protein HOX28, Homeodomain transcription factor HOX28, OsHox28 |
Species |
Oryza sativa subsp japonica (Rice) |
KEGG Pathway |
osa:4340069 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q5VPE5
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q5VPE5-F1 | Predicted | AlphaFoldDB |
No variants for Q5VPE5
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q5VPE5 | |||||
No associated diseases with Q5VPE5
5 regional properties for Q5VPE5
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Myosin head, motor domain | 51 - 772 | IPR001609 |
| domain | Myosin, N-terminal, SH3-like | 2 - 53 | IPR004009 |
| domain | Myosin VI, cargo binding domain | 1177 - 1267 | IPR032412 |
| domain | Class VI myosin, motor domain | 71 - 759 | IPR036114 |
| domain | Myosin VI, lever arm | 770 - 917 | IPR049016 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA-binding transcription factor activity, RNA polymerase II-specific | A DNA-binding transcription factor activity that modulates the transcription of specific gene sets transcribed by RNA polymerase II. |
| sequence-specific DNA binding | Binding to DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
7 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q03014 | HHEX | Hematopoietically-expressed homeobox protein HHEX | Homo sapiens (Human) | PR |
| Q6H6S3 | HOX24 | Homeobox-leucine zipper protein HOX24 | Oryza sativa subsp japonica (Rice) | PR |
| Q7XUJ5 | HOX22 | Homeobox-leucine zipper protein HOX22 | Oryza sativa subsp japonica (Rice) | PR |
| A3BYC1 | HOX25 | Homeobox-leucine zipper protein HOX25 | Oryza sativa subsp japonica (Rice) | PR |
| P46603 | HAT9 | Homeobox-leucine zipper protein HAT9 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M276 | ATHB-12 | Homeobox-leucine zipper protein ATHB-12 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FN29 | ATHB-52 | Homeobox-leucine zipper protein ATHB-52 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MERQGLDLGL | SLGLGLTTAA | TWPAAGFCLN | SGMAEQEVIR | RDDVVAATAA | EDERFACSPG |
| 70 | 80 | 90 | 100 | 110 | 120 |
| SPVSSGSGKR | GSGSGSGDEV | DDAGCDVGGG | GARKKLRLSK | DQAAVLEECF | KTHHTLTPKQ |
| 130 | 140 | 150 | 160 | 170 | 180 |
| KVALAKSLNL | RPRQVEVWFQ | NRRARTKLKQ | TEVDCEHLKR | WCDQLADDNR | RLHKELAELR |
| 190 | 200 | 210 | 220 | 230 | 240 |
| ALKATPTPPA | AAPPLTTLTM | CLSCKRVANA | GVPSPAAAIF | PGHPQFLCGF | RDHAGAASSS |
| 250 | |||||
| YGGASSGLAK | AVRAAR |