Q56X72
Gene name |
RTNLB21 (At5g58000, MTI20.26) |
Protein name |
Reticulon-like protein B21 |
Names |
AtRTNLB21 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT5G58000 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q56X72
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q56X72-F1 | Predicted | AlphaFoldDB |
42 variants for Q56X72
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_5_23477419_A_C | 2 | T>P | No | 1000Genomes | |
| ENSVATH12836730 | 20 | S>A | No | 1000Genomes | |
| tmp_5_23477498_C_T | 28 | S>F | No | 1000Genomes | |
| ENSVATH07443509 | 34 | I>S | No | 1000Genomes | |
| tmp_5_23477573_C_A | 53 | T>K | No | 1000Genomes | |
| tmp_5_23477600_C_T | 62 | S>L | No | 1000Genomes | |
| ENSVATH07443510 | 80 | D>N | No | 1000Genomes | |
| ENSVATH03446681 | 83 | T>S | No | 1000Genomes | |
| ENSVATH00740120 | 98 | E>D | No | 1000Genomes | |
| ENSVATH03446682 | 101 | E>D | No | 1000Genomes | |
| tmp_5_23477725_G_A | 104 | V>I | No | 1000Genomes | |
| ENSVATH03446683 | 116 | E>K | No | 1000Genomes | |
| ENSVATH03446684 | 139 | E>D | No | 1000Genomes | |
| ENSVATH07443511 | 140 | E>K | No | 1000Genomes | |
| ENSVATH07443512 | 141 | E>K | No | 1000Genomes | |
| tmp_5_23477858_A_G | 148 | K>R | No | 1000Genomes | |
| ENSVATH00740121 | 155 | I>M | No | 1000Genomes | |
| ENSVATH07443514 | 164 | G>A | No | 1000Genomes | |
| tmp_5_23477911_G_T | 166 | V>F | No | 1000Genomes | |
| tmp_5_23477925_G_T | 170 | K>N | No | 1000Genomes | |
| tmp_5_23477926_T_A | 171 | F>I | No | 1000Genomes | |
| ENSVATH03446688 | 179 | S>A | No | 1000Genomes | |
| tmp_5_23477951_C_A | 179 | S>Y | No | 1000Genomes | |
| tmp_5_23477975_A_T | 187 | K>I | No | 1000Genomes | |
| ENSVATH00740122 | 188 | I>V | No | 1000Genomes | |
| ENSVATH07443515 | 190 | P>S | No | 1000Genomes | |
| tmp_5_23477986_C_T | 191 | P>S | No | 1000Genomes | |
| tmp_5_23477995_A_C | 194 | K>Q | No | 1000Genomes | |
| tmp_5_23478026_C_G | 204 | P>R | No | 1000Genomes | |
| ENSVATH07443516 | 227 | L>M | No | 1000Genomes | |
| tmp_5_23478317_G_T,A | 237 | R>K | No | 1000Genomes | |
| tmp_5_23478317_G_T,A | 237 | R>M | No | 1000Genomes | |
| tmp_5_23478552_C_T | 286 | S>L | No | 1000Genomes | |
| ENSVATH12836768 | 294 | E>V | No | 1000Genomes | |
| tmp_5_23478713_A_G | 311 | M>V | No | 1000Genomes | |
| tmp_5_23478935_G_T | 357 | W>C | No | 1000Genomes | |
| ENSVATH14638605 | 380 | H>P | No | 1000Genomes | |
| ENSVATH12836773 | 386 | N>S | No | 1000Genomes | |
| ENSVATH14638606 | 426 | A>V | No | 1000Genomes | |
| ENSVATH12836775 | 449 | D>V | No | 1000Genomes | |
| ENSVATH14638607 | 450 | D>H | No | 1000Genomes | |
| ENSVATH12836776 | 475 | P>H | No | 1000Genomes |
No associated diseases with Q56X72
1 regional properties for Q56X72
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Reticulon | 230 - 384 | IPR003388 |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q8LDS3 | RTNLB18 | Reticulon-like protein B18 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MTPRRSLSSS | DSNDKSPSVS | VVAKKARSES | VEGIEKKTTP | GRVKKIRSEV | CTTIVKAGEF |
| 70 | 80 | 90 | 100 | 110 | 120 |
| DSVALRKVNS | LPSPNSEKSD | TKTEQEVTII | ENSKIPEEVK | EFGVCQEMIV | SAKSNENEQI |
| 130 | 140 | 150 | 160 | 170 | 180 |
| DNGDQEIGDQ | DDYEEDGDEE | EEREVEKKSV | DVKEINVAKE | NRVGGVEIKK | FSQFQNRTSP |
| 190 | 200 | 210 | 220 | 230 | 240 |
| SPSSVRKISP | PVIKRATSVY | SAPPNSTSST | DRFAEQEDNF | THSQSKLQSL | VDLVMWRDVS |
| 250 | 260 | 270 | 280 | 290 | 300 |
| RSTLVFGFGT | FLIISSSYAN | DLNFSFISVV | AYMGLIYLGL | MFVLKSLIHR | GMVEEERHKV |
| 310 | 320 | 330 | 340 | 350 | 360 |
| VGVREEDVKR | MLRLIMPYLN | ESLHQLRALF | SGDPSTTLKM | GVVLFVLARC | GSSITLWNLA |
| 370 | 380 | 390 | 400 | 410 | 420 |
| KFGFLGAFTI | PKIFISYSTH | FSAYGNFWMR | RFRDAWESCN | HKKAVALALF | TLVWNLSSVT |
| 430 | 440 | 450 | 460 | 470 | 480 |
| ARVWAAFMLL | VAFRYYQHKM | IWTTDQADDD | EDDNEEEEAE | EEKEQVPPKH | KRAPPHMMMP |
| NKLKKIS |