Q3E958
Gene name |
SHN3 (ERF005, At5g25390, F18G18.130) |
Protein name |
Ethylene-responsive transcription factor SHINE 3 |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT5G25390 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q3E958
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q3E958-F1 | Predicted | AlphaFoldDB |
17 variants for Q3E958
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_5_8820640_G_A | 2 | V>I | No | 1000Genomes | |
| ENSVATH07041991 | 4 | S>L | No | 1000Genomes | |
| ENSVATH14191359 | 26 | L>F | No | 1000Genomes | |
| ENSVATH00647436 | 51 | V>I | No | 1000Genomes | |
| tmp_5_8821385_T_C | 72 | S>P | No | 1000Genomes | |
| ENSVATH07042015 | 75 | I>V | No | 1000Genomes | |
| ENSVATH07042017 | 78 | A>T | No | 1000Genomes | |
| ENSVATH14191362 | 81 | S>F | No | 1000Genomes | |
| tmp_5_8821534_A_C | 121 | K>N | No | 1000Genomes | |
| tmp_5_8821608_G_C | 146 | G>A | No | 1000Genomes | |
| ENSVATH11042826 | 147 | G>D | No | 1000Genomes | |
| ENSVATH07042022 | 149 | I>M | No | 1000Genomes | |
| ENSVATH07042023 | 150 | E>G | No | 1000Genomes | |
| ENSVATH07042025 | 157 | R>Q | No | 1000Genomes | |
| tmp_5_8821657_G_C | 162 | Q>H | No | 1000Genomes | |
| ENSVATH00647439 | 183 | S>C | No | 1000Genomes | |
| ENSVATH07042026 | 186 | I>M | No | 1000Genomes |
No associated diseases with Q3E958
1 regional properties for Q3E958
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | AP2/ERF domain | 5 - 69 | IPR001471 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| DNA-binding transcription factor activity | A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| ethylene-activated signaling pathway | The series of molecular signals generated by the reception of ethylene (ethene, C2H4) by a receptor and ending with modulation of a cellular process, e.g. transcription. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q8W4I5 | ERF069 | Ethylene-responsive transcription factor ERF069 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MVHSKKFRGV | RQRQWGSWVS | EIRHPLLKRR | VWLGTFDTAE | TAARAYDQAA | VLMNGQSAKT |
| 70 | 80 | 90 | 100 | 110 | 120 |
| NFPVIKSNGS | NSLEINSALR | SPKSLSELLN | AKLRKNCKDQ | TPYLTCLRLD | NDSSHIGVWQ |
| 130 | 140 | 150 | 160 | 170 | 180 |
| KRAGSKTSPN | WVKLVELGDK | VNARPGGDIE | TNKMKVRNED | VQEDDQMAMQ | MIEELLNWTC |
| PGSGSIAQV |