Q15397
Gene name |
PUM3 |
Protein name |
Pumilio homolog 3 |
Names |
HBV X-transactivated gene 5 protein, HBV XAg-transactivated protein 5, Minor histocompatibility antigen HA-8, HLA-HA8 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:9933 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
3 structures for Q15397
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 4WZR | X-ray | 215 A | A/B | 123-648 | PDB |
| 4WZW | X-ray | 295 A | A | 129-648 | PDB |
| AF-Q15397-F1 | Predicted | AlphaFoldDB |
771 variants for Q15397
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA372800796 rs1476676340 |
2 | E>Q | No |
ClinGen TOPMed |
|
|
CA187984256 rs751576636 |
3 | V>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1230659057 CA372800774 |
3 | V>F | No |
ClinGen TOPMed gnomAD |
|
|
CA4966855 rs751576636 |
3 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966854 rs200648134 |
7 | K>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4966853 rs762566946 |
8 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1376951133 CA372800680 |
9 | F>L | No |
ClinGen TOPMed |
|
|
rs1318633136 CA372800678 |
10 | T>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1357294945 CA372800672 |
11 | G>R | No |
ClinGen TOPMed |
|
|
rs1387852842 CA372800661 |
12 | K>N | No |
ClinGen gnomAD |
|
|
rs566093360 CA4966852 |
12 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759294824 CA4966850 |
13 | S>G | No |
ClinGen ExAC gnomAD |
|
|
VAR_051613 CA4966849 rs10968457 |
13 | S>N | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs759294824 CA4966851 |
13 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA372800636 rs1225961229 |
16 | T>R | No |
ClinGen TOPMed |
|
|
CA372800629 rs1411425877 |
17 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA4966848 rs771384491 |
18 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966846 rs778381965 |
21 | N>K | No |
ClinGen ExAC |
|
|
rs1449187381 CA372800601 |
21 | N>S | No |
ClinGen TOPMed |
|
| TCGA novel | 21 | N>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs747328924 CA4966847 |
21 | N>Y | No |
ClinGen ExAC gnomAD |
|
|
CA372800595 rs1186150626 |
22 | R>T | No |
ClinGen gnomAD |
|
|
CA372800590 rs1217174645 |
23 | F>L | No |
ClinGen TOPMed |
|
|
COSM1331587 CA4966844 rs772434075 |
24 | H>L | ovary Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 24 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4966843 rs748601867 |
26 | N>T | No |
ClinGen ExAC gnomAD |
|
|
rs372804076 CA4966842 |
27 | S>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs758200088 CA4966818 |
29 | S>A | No |
ClinGen ExAC gnomAD |
|
|
rs752695500 CA4966817 |
29 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs758200088 CA372800456 |
29 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs765261748 CA4966816 |
30 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA372800447 rs1171927852 |
30 | G>R | No |
ClinGen gnomAD |
|
|
rs765261748 CA187983313 |
30 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA187983309 rs1027761981 |
31 | S>Y | No |
ClinGen TOPMed |
|
| TCGA novel | 32 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1425039882 CA372800414 |
33 | K>E | No |
ClinGen gnomAD |
|
|
CA4966815 rs754573824 |
33 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372800401 rs1481614543 |
34 | T>A | No |
ClinGen gnomAD |
|
|
CA4966814 rs753264176 |
36 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372800367 rs1428560003 |
36 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1428560003 CA372800365 |
36 | P>Q | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 36 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs570038331 CA4966813 |
37 | T>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs549907541 CA4966811 |
38 | R>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs372338845 CA372800332 |
39 | K>E | No |
ClinGen 1000Genomes ESP TOPMed |
|
|
CA4966809 rs372338845 |
39 | K>Q | No |
ClinGen 1000Genomes ESP TOPMed |
|
|
CA4966808 rs767879045 |
40 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1277804262 CA372800300 |
41 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA187983278 rs944963222 |
41 | A>V | No |
ClinGen Ensembl |
|
|
CA4966807 rs762156382 |
42 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA372800207 rs1350757652 |
46 | P>L | No |
ClinGen gnomAD |
|
|
CA372800208 rs1350757652 |
46 | P>R | No |
ClinGen gnomAD |
|
|
CA372800203 rs1464083235 |
47 | K>E | No |
ClinGen gnomAD |
|
|
CA4966803 rs561872127 |
47 | K>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA372800199 rs561872127 |
47 | K>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs769880207 CA4966801 |
49 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA4966800 rs746082213 |
50 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA187983222 rs746082213 |
50 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746082213 CA372800146 |
50 | S>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA187983215 rs911883035 |
51 | R>G | No |
ClinGen Ensembl |
|
|
rs781418312 CA4966799 |
52 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372800090 rs1181934892 |
52 | N>S | No |
ClinGen gnomAD |
|
|
rs953484357 CA187983192 |
53 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1252892082 CA372800079 |
53 | F>L | No |
ClinGen gnomAD |
|
|
CA4966798 rs200897206 |
53 | F>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4966797 rs779040568 |
54 | E>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 54 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs779040568 CA4966796 |
54 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA372800030 rs1325610022 |
55 | K>R | No |
ClinGen gnomAD |
|
|
rs1325610022 CA372800032 |
55 | K>T | No |
ClinGen gnomAD |
|
|
CA372799981 rs1329664284 COSM161892 |
57 | I>M | NS [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs376378791 CA4966794 |
57 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA372799966 rs1249647473 |
58 | T>R | No |
ClinGen TOPMed |
|
|
CA372799952 rs1417252952 |
59 | K>T | No |
ClinGen TOPMed |
|
|
CA4966793 rs753765535 |
60 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA372799931 rs1393991833 |
60 | L>R | No |
ClinGen gnomAD |
|
|
rs372050840 CA372799904 |
62 | K>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4966792 rs372050840 |
62 | K>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs750097840 CA4966790 |
63 | K>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM3413583 rs750097840 CA372799875 |
63 | K>R | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA4966789 rs201992068 |
64 | G>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs751901387 CA4966787 |
64 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA4966788 rs201992068 |
64 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4966786 rs764396689 |
65 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1365974206 CA372799835 |
65 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA372799839 rs1365974206 |
65 | V>L | No |
ClinGen gnomAD |
|
|
CA187983090 rs570743183 |
68 | F>C | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA4966785 rs201447503 |
68 | F>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA372799756 rs1335492252 |
69 | K>R | No |
ClinGen TOPMed |
|
|
rs776001344 CA4966784 |
70 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1262343013 CA372799717 |
72 | Q>R | No |
ClinGen gnomAD |
|
|
CA372799697 rs1340222940 |
73 | Q>H | No |
ClinGen TOPMed |
|
|
rs777032440 CA4966781 |
73 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs1320798016 CA372799693 |
74 | G>R | No |
ClinGen gnomAD |
|
|
CA372799663 rs1563836108 |
76 | K>T | No |
ClinGen Ensembl |
|
|
rs1563836104 CA372799643 |
78 | P>T | No |
ClinGen Ensembl |
|
|
CA372799621 COSM261533 rs1247482331 |
79 | K>N | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1001570977 CA187983056 |
79 | K>R | No |
ClinGen Ensembl |
|
|
CA4966780 rs771254376 |
80 | N>S | No |
ClinGen ExAC |
|
|
CA4966779 rs747178136 |
81 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372799596 rs1320399288 |
81 | K>R | No |
ClinGen gnomAD |
|
|
rs778879088 CA4966778 |
82 | F>C | No |
ClinGen ExAC gnomAD |
|
|
rs778879088 CA372799580 |
82 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA372799572 rs1292204580 |
83 | Q>* | No |
ClinGen gnomAD |
|
|
rs749192751 CA4966776 |
83 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966773 rs201936048 |
84 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4966774 rs201936048 |
84 | P>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4966775 rs201936048 |
84 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1369235251 CA372799561 |
84 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA372799536 rs1479595454 |
86 | N>H | No |
ClinGen TOPMed |
|
|
rs552128111 CA187983027 |
86 | N>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs773816251 CA4966771 |
88 | F>V | No |
ClinGen ExAC |
|
|
rs751174978 CA4966769 |
89 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs112185565 CA4966767 |
89 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4966768 rs112185565 |
89 | N>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs753202855 CA4966766 |
90 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA372799349 rs1250065855 |
93 | K>R | No |
ClinGen TOPMed |
|
|
CA4966764 rs376054493 |
94 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1586728951 CA372799332 |
94 | F>S | No |
ClinGen Ensembl |
|
|
CA372799321 rs1169772675 |
95 | Q>E | No |
ClinGen TOPMed |
|
|
rs1291987634 CA372799310 |
95 | Q>H | No |
ClinGen gnomAD |
|
|
rs1224267580 CA372799285 |
97 | D>G | No |
ClinGen gnomAD |
|
|
rs201647648 CA4966762 |
98 | G>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4966761 rs201647648 |
98 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1430043772 CA372799260 |
99 | R>G | No |
ClinGen gnomAD |
|
|
rs1563836043 CA372799243 |
99 | R>S | No |
ClinGen Ensembl |
|
|
rs952553092 CA187982997 |
100 | S>G | No |
ClinGen TOPMed |
|
|
rs773508342 CA372799221 |
100 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1296317922 CA372799229 |
100 | S>T | No |
ClinGen gnomAD |
|
|
rs562898502 CA4966759 |
101 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1200376462 CA372797976 |
103 | S>P | No |
ClinGen gnomAD |
|
|
CA372797937 rs1265354155 |
106 | K>E | No |
ClinGen gnomAD |
|
|
rs1226900827 CA372797935 |
106 | K>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs766986084 CA4966723 |
108 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754449386 CA4966724 |
108 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1158296691 CA372797913 |
109 | K>R | No |
ClinGen gnomAD |
|
|
CA187980225 rs749788204 |
110 | W>* | No |
ClinGen gnomAD |
|
|
CA4966722 rs756299455 |
110 | W>C | No |
ClinGen ExAC gnomAD |
|
|
rs750511836 CA4966721 |
114 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA4966719 rs1455542440 |
115 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
CA372797867 rs1406783596 |
115 | K>R | No |
ClinGen gnomAD |
|
|
rs1178532332 CA372797860 |
116 | K>R | No |
ClinGen gnomAD |
|
|
rs186041778 CA4966717 |
122 | Q>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs762131294 CA4966716 |
123 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA372797810 rs1400450176 |
123 | S>N | No |
ClinGen TOPMed |
|
|
rs114287488 CA4966715 |
124 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA187980183 rs765093972 |
125 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA4966714 rs765093972 |
125 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA4966713 rs184075081 COSM1197351 |
126 | L>P | lung [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA372797785 rs1235733931 |
126 | L>V | No |
ClinGen TOPMed |
|
|
CA372797774 rs770825637 |
127 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966711 rs770825637 |
127 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746898956 CA4966710 |
128 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA4966709 rs772808674 |
131 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1288864671 CA372797717 |
131 | N>K | No |
ClinGen TOPMed |
|
|
rs370230841 CA4966708 |
132 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1283639483 CA372797715 |
132 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
rs374981902 CA187980119 |
134 | I>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs374981902 CA4966706 |
134 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA372797660 rs372409722 |
137 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4966703 rs780759295 |
137 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs372409722 CA4966704 |
137 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs750924701 CA4966701 |
138 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA372797631 rs1386562595 |
140 | Q>* | No |
ClinGen gnomAD |
|
|
CA4966700 rs781340473 |
141 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1380856328 CA372797578 |
143 | E>G | No |
ClinGen Ensembl |
|
|
CA372797584 rs1449450338 |
143 | E>Q | No |
ClinGen gnomAD |
|
|
rs923446763 CA372797553 |
145 | L>* | No |
ClinGen TOPMed gnomAD |
|
|
CA187980087 rs923446763 |
145 | L>S | No |
ClinGen TOPMed gnomAD |
|
|
CA372797546 rs1270590289 |
146 | R>G | No |
ClinGen gnomAD |
|
|
rs376563747 CA187979504 |
149 | D>G | No |
ClinGen ESP |
|
|
rs1282462460 CA372797452 |
149 | D>H | No |
ClinGen gnomAD |
|
|
CA372797450 rs1282462460 |
149 | D>Y | No |
ClinGen gnomAD |
|
|
rs751564407 CA4966677 |
150 | C>* | No |
ClinGen ExAC gnomAD |
|
|
CA4966676 rs748383609 |
150 | C>* | No |
ClinGen ExAC gnomAD |
|
|
rs1405151861 CA372797439 |
150 | C>R | No |
ClinGen gnomAD |
|
|
CA372797428 rs1305828522 |
151 | D>N | No |
ClinGen gnomAD |
|
|
rs778019262 CA4966675 |
152 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 153 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4966674 rs758648743 |
153 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs372279353 CA187979494 |
153 | E>G | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA187979493 rs879103318 |
154 | K>R | No |
ClinGen Ensembl |
|
|
rs752848143 CA4966673 |
155 | R>G | No |
ClinGen ExAC gnomAD |
|
| rs554604549 | 155 | R>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA372797358 rs1341533372 |
156 | V>A | No |
ClinGen TOPMed |
|
|
CA372797362 rs1249832842 |
156 | V>L | No |
ClinGen gnomAD |
|
|
CA4966671 rs760449250 |
157 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966670 rs750436963 |
157 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1206520719 CA372797338 |
158 | L>S | No |
ClinGen gnomAD |
|
|
CA187979470 rs1022147701 |
159 | M>V | No |
ClinGen TOPMed |
|
|
rs1262244059 CA372797267 |
164 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1223852144 CA372797248 |
165 | L>F | No |
ClinGen gnomAD |
|
|
rs1011180454 CA187979466 |
166 | I>T | No |
ClinGen TOPMed |
|
|
rs1325449973 CA372797231 COSM1108068 |
167 | Q>* | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs761432772 CA4966668 |
172 | T>A | No |
ClinGen ExAC |
|
|
rs574415209 CA4966639 |
174 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966636 rs779152096 |
177 | H>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372796550 rs1446426961 |
177 | H>R | No |
ClinGen gnomAD |
|
|
CA372796531 rs1293207541 |
178 | D>G | No |
ClinGen TOPMed |
|
|
rs749489716 CA372796538 COSM1108067 |
178 | D>N | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs749489716 CA4966634 |
178 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780856090 CA4966633 |
179 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372796503 rs1219804185 |
180 | T>S | No |
ClinGen gnomAD |
|
|
rs751608520 CA4966631 |
180 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966630 COSM1461940 rs758022107 |
181 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs758022107 CA4966629 |
181 | R>G | No |
ClinGen ExAC gnomAD |
|
|
COSM1461939 rs1460072058 CA372796491 |
181 | R>H | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs752235273 CA4966628 |
182 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs764756748 CA4966627 |
183 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs940999053 CA187977622 |
184 | Q>H | No |
ClinGen TOPMed |
|
|
CA586168670 rs1295537015 |
186 | Y>* | No |
ClinGen TOPMed gnomAD |
|
|
CA372796395 rs1383079509 |
187 | I>L | No |
ClinGen gnomAD |
|
|
rs141834527 CA4966626 |
188 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs563094261 CA4966625 |
189 | Y>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA187977613 rs1044316512 |
189 | Y>C | No |
ClinGen TOPMed |
|
|
rs1291932388 CA372796369 COSM1461937 |
189 | Y>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA372796357 rs1563833669 |
190 | G>S | No |
ClinGen Ensembl |
|
|
CA372796338 rs1228241840 |
192 | E>K | No |
ClinGen Ensembl |
|
|
rs931246335 COSM275666 CA187977593 |
193 | E>K | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
rs200685148 CA4966624 |
194 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200685148 CA372796309 |
194 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372796271 rs1371223220 |
197 | Q>* | No |
ClinGen gnomAD |
|
|
CA372796263 rs1428826093 |
197 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA4966623 rs761095889 |
197 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966622 rs773744912 |
198 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1263670414 CA372796260 |
198 | A>P | No |
ClinGen gnomAD |
|
|
CA187977584 rs773744912 |
198 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966620 rs748601904 |
199 | F>C | No |
ClinGen ExAC gnomAD |
|
|
rs377017737 CA4966621 |
199 | F>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4966618 rs375052256 |
203 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA187977535 rs375052256 |
203 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370834085 CA4966617 |
203 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA372796153 rs770035848 |
205 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA4966597 rs770035848 |
205 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA372796137 rs777743765 |
206 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA4966596 rs145833702 |
206 | L>S | No |
ClinGen ESP ExAC |
|
|
rs771933148 CA4966594 |
207 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA4966593 rs200887718 |
208 | E>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs949790121 CA187977207 |
208 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA4966592 rs201623644 |
209 | L>* | No |
ClinGen ExAC gnomAD |
|
|
rs1473082189 CA372796114 |
209 | L>I | No |
ClinGen TOPMed |
|
|
CA372796103 rs1241779268 |
210 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA372796099 rs1203593660 |
210 | S>N | No |
ClinGen gnomAD |
|
|
CA372796090 rs1462043710 |
211 | K>E | No |
ClinGen gnomAD |
|
|
rs1265453043 CA372796085 |
211 | K>R | No |
ClinGen gnomAD |
|
|
CA372796076 rs1350283373 |
212 | A>P | No |
ClinGen gnomAD |
|
|
CA4966588 rs779379304 |
214 | Y>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA4966587 rs755791650 COSM3848314 |
215 | S>L | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA4966585 rs767883563 |
217 | N>H | No |
ClinGen ExAC gnomAD |
|
|
rs932438595 CA372796015 |
217 | N>I | No |
ClinGen TOPMed gnomAD |
|
|
rs932438595 CA187977166 |
217 | N>T | No |
ClinGen TOPMed gnomAD |
|
|
CA4966584 rs762154576 |
218 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs1406520999 CA372796004 |
218 | I>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1406520999 CA372796006 |
218 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1368008103 CA372796003 |
219 | V>F | No |
ClinGen TOPMed |
|
|
rs934482048 CA187977136 |
219 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
CA187977123 rs922101487 |
221 | K>E | No |
ClinGen Ensembl |
|
|
rs1383737044 CA372795984 |
221 | K>T | No |
ClinGen TOPMed gnomAD |
|
|
rs752076463 CA4966583 |
223 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs776778822 CA187977093 |
224 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
CA187977071 rs200643936 |
225 | Y>* | No |
ClinGen Ensembl |
|
|
rs373954508 CA372795931 |
225 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4966581 rs373954508 |
225 | Y>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1445821003 CA372795919 |
226 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1173323407 CA372795530 |
227 | S>G | No |
ClinGen gnomAD |
|
|
CA4966552 rs760756178 |
230 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
CA4966551 rs375775313 |
232 | A>S | No |
ClinGen ESP ExAC gnomAD |
|
|
rs375775313 CA372795450 |
232 | A>T | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1013093618 CA187975972 |
234 | I>T | No |
ClinGen Ensembl |
|
|
CA372795394 rs1202329355 |
235 | I>T | No |
ClinGen gnomAD |
|
|
CA187975959 rs141030068 |
238 | F>L | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA4966548 rs775396023 |
238 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA372795342 rs141030068 |
238 | F>V | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs371280326 CA187975952 |
239 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
rs938818371 CA187975947 |
240 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
CA4966547 rs769363799 |
240 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372795286 rs1417446680 |
241 | H>R | No |
ClinGen TOPMed |
|
| TCGA novel | 242 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4966544 rs151064539 |
242 | V>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs558845198 CA4966545 |
242 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA4966543 rs746603179 |
244 | K>* | No |
ClinGen ExAC gnomAD |
|
|
rs1355580841 CA372795226 |
245 | M>L | No |
ClinGen gnomAD |
|
|
rs1333976123 CA372795208 |
246 | L>V | No |
ClinGen gnomAD |
|
|
rs758633890 CA4966540 |
247 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1177405744 CA372795197 COSM1108065 |
247 | R>W | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA187975898 rs753311824 |
248 | H>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA187975886 rs953076880 |
248 | H>R | No |
ClinGen TOPMed |
|
|
CA4966539 rs753311824 |
248 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966537 rs199616112 |
249 | A>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4966538 rs199616112 COSM3413582 |
249 | A>V | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
| TCGA novel | 250 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1563833023 CA372795150 |
250 | E>G | No |
ClinGen Ensembl |
|
|
rs139556218 CA4966535 |
251 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4966534 rs760953467 |
252 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs750186876 CA372795119 |
253 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966533 rs750186876 |
253 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762655084 CA372795099 |
254 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372795110 rs1203880269 |
254 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs769701789 CA4966529 |
255 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA4966530 rs146785349 |
255 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs139189443 CA372795061 |
257 | Y>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4966527 rs73377856 |
257 | Y>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs62534389 CA187975824 |
258 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA4966525 rs62534389 COSM3413581 |
258 | A>T | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA4966524 rs757382214 |
258 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748498419 CA4966522 |
259 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1343607082 CA372795046 |
259 | Y>H | No |
ClinGen gnomAD |
|
|
rs536311202 CA4966521 |
260 | N>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs536311202 CA372795038 |
260 | N>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4966520 rs755573340 |
261 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1180416464 CA372795013 |
262 | K>E | No |
ClinGen gnomAD |
|
|
VAR_051614 rs35869387 CA4966518 RCV000969556 |
264 | I>V | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs756132814 CA4966517 |
265 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1484123645 CA372794976 |
265 | L>W | No |
ClinGen gnomAD |
|
|
CA372794943 rs1214719604 |
267 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs750725732 CA4966516 |
268 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA372794933 rs1287606465 |
268 | R>T | No |
ClinGen gnomAD |
|
|
CA4966515 rs767604458 |
269 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA4966514 CA187975749 rs370007578 |
270 | M>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370007578 CA4966513 |
270 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs149724707 CA372794887 |
272 | T>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs149724707 CA4966512 COSM338400 |
272 | T>M | lung [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs556510946 CA4966510 |
276 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966509 rs776496682 |
277 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs1139545 CA187975703 |
278 | N>K | No |
ClinGen Ensembl |
|
|
rs1384481092 CA372794812 |
278 | N>T | No |
ClinGen gnomAD |
|
|
rs770534523 CA4966508 |
278 | N>Y | No |
ClinGen ExAC gnomAD |
|
|
rs201059766 CA4966506 |
279 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs201059766 CA372794804 |
279 | T>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4966507 rs760070514 |
279 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA372794792 rs1586725889 |
280 | F>C | No |
ClinGen Ensembl |
|
|
CA372794778 rs1185551255 |
281 | Q>H | No |
ClinGen gnomAD |
|
|
CA4966504 rs372298847 |
284 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4966476 rs757273496 |
285 | S>* | No |
ClinGen ExAC gnomAD |
|
|
CA187974568 rs376800757 |
286 | A>P | No |
ClinGen gnomAD |
|
|
rs747292953 CA4966475 |
287 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372794386 rs139543678 CA4966474 |
288 | H>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs386731748 CA187974542 |
288 | H>QP | No |
ClinGen Ensembl |
|
|
CA187974564 rs974797274 |
288 | H>Y | No |
ClinGen TOPMed |
|
|
CA4966473 rs754814072 |
289 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA372794374 rs2173904 |
289 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs2173904 CA4966471 VAR_023772 |
289 | R>P | allele HA-8P and allele HA-8PL [UniProt] | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA4966472 rs2173904 |
289 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs756005709 CA4966470 |
290 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs766993196 CA372794339 |
292 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs540277318 CA4966469 |
292 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1459364599 CA372794317 |
294 | V>A | No |
ClinGen gnomAD |
|
|
rs201465798 CA4966466 |
296 | E>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4966464 rs2270891 |
297 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4966463 VAR_023773 rs2270891 |
297 | V>L | allele HA-8PL [UniProt] | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1335255484 CA372794272 |
298 | Q>H | No |
ClinGen gnomAD |
|
|
rs537493626 CA4966462 |
298 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA372794268 rs1260501693 |
299 | P>A | No |
ClinGen TOPMed |
|
|
rs777185887 CA4966460 |
300 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA4966459 rs137936878 CA4966458 |
302 | L>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA372794224 rs1431188643 |
303 | E>* | No |
ClinGen TOPMed |
|
|
rs777778720 CA4966457 |
305 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372794212 rs777778720 |
305 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs555602821 CA4966455 |
305 | I>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs758646587 CA4966456 |
305 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966453 rs755923388 |
306 | M>K | No |
ClinGen ExAC |
|
|
CA4966454 rs147348344 |
306 | M>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA187974455 rs147348344 |
306 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA372794176 rs1362778621 |
310 | K>E | No |
ClinGen gnomAD |
|
|
rs944218481 CA187974442 |
311 | Q>K | No |
ClinGen Ensembl |
|
|
CA372794149 rs1179792116 |
313 | L>Q | No |
ClinGen gnomAD |
|
|
rs143778583 CA187974436 |
313 | L>V | No |
ClinGen Ensembl |
|
|
rs188123994 CA4966452 |
314 | T>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA187974431 rs985755420 |
315 | P>R | No |
ClinGen Ensembl |
|
|
rs1449385486 CA372794122 |
316 | M>T | No |
ClinGen TOPMed |
|
|
rs376706931 COSM4152239 CA4966450 |
316 | M>V | ovary [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA187972858 rs757292562 |
320 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372793935 rs1225010661 |
321 | A>G | No |
ClinGen gnomAD |
|
|
rs751477052 CA4966429 |
322 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs777443004 CA4966428 |
323 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA4966426 rs752362518 |
324 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372793898 rs1323464217 |
325 | H>Y | No |
ClinGen gnomAD |
|
|
rs1196120482 CA372793857 |
328 | V>E | No |
ClinGen gnomAD |
|
|
CA372793859 rs1424527138 |
328 | V>L | No |
ClinGen gnomAD |
|
|
CA4966422 rs766660254 |
329 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA372793825 rs1220709187 |
331 | V>I | No |
ClinGen gnomAD |
|
|
rs1563831980 CA372793789 |
333 | L>F | No |
ClinGen Ensembl |
|
|
rs1327551861 CA372793782 |
334 | D>A | No |
ClinGen gnomAD |
|
|
rs1291967183 CA372793776 |
334 | D>E | No |
ClinGen gnomAD |
|
|
CA372793786 rs1452069815 |
334 | D>Y | No |
ClinGen gnomAD |
|
|
rs1050647317 CA187972747 |
335 | F>I | No |
ClinGen TOPMed |
|
|
CA4966420 rs773695748 |
335 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA372793771 rs1050647317 |
335 | F>V | No |
ClinGen TOPMed |
|
| TCGA novel | 336 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1178995767 CA372793751 |
336 | F>Y | No |
ClinGen TOPMed |
|
|
rs761919592 CA4966417 |
337 | T>S | No |
ClinGen ExAC |
|
|
CA372793731 rs1220154991 |
338 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs774484372 CA4966416 |
339 | A>T | No |
ClinGen ExAC gnomAD |
|
|
COSM393852 CA4966415 rs768947089 |
339 | A>V | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs749433160 CA4966414 |
340 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs1163890073 CA372793714 |
340 | P>T | No |
ClinGen gnomAD |
|
|
rs781139610 CA4966413 |
341 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1352072714 CA372793702 |
341 | P>S | No |
ClinGen gnomAD |
|
|
CA372793700 rs1352072714 |
341 | P>T | No |
ClinGen gnomAD |
|
|
rs770792573 CA372793686 |
342 | K>I | No |
ClinGen ExAC gnomAD |
|
| rs749329036 | 342 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| rs749329036 | 342 | K>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs770792573 CA4966410 |
342 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA4966408 rs777852143 |
343 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1479056479 CA372793670 |
344 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs747675244 CA4966407 |
344 | R>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966404 rs367888081 |
344 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4966406 rs747675244 |
344 | R>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372793655 rs201465000 |
345 | S>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4966403 rs201465000 |
345 | S>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA372793330 rs1160382802 |
347 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
rs928746030 CA187970140 |
347 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA4966381 rs767735218 |
348 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1255283346 CA372793292 |
350 | A>P | No |
ClinGen gnomAD |
|
|
rs1182062588 CA372793284 |
350 | A>V | No |
ClinGen gnomAD |
|
| TCGA novel | 351 | I>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA372793263 COSM3780733 rs1323567793 |
352 | R>C | pancreas [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA4966378 rs148383025 |
352 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA372793259 rs148383025 |
352 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1285679562 CA372793240 COSM1624896 |
353 | E>D | liver [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
CA372793244 rs775898601 |
353 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1288777773 CA372793253 |
353 | E>K | No |
ClinGen gnomAD |
|
|
CA4966376 rs775898601 |
353 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1321475805 CA372793238 |
354 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA187970096 rs367908750 |
354 | A>V | No |
ClinGen gnomAD |
|
|
rs946078552 CA4966374 |
355 | V>A | No |
ClinGen TOPMed |
|
|
rs765536458 CA4966373 |
356 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA4966372 rs781640015 |
358 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA372793187 rs1400612796 |
359 | A>T | No |
ClinGen gnomAD |
|
|
CA372793177 rs1274845399 |
359 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA4966371 rs773061327 |
360 | H>D | No |
ClinGen ExAC gnomAD |
|
|
rs773061327 CA372793173 |
360 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA372793156 rs1456372554 |
361 | T>I | No |
ClinGen gnomAD |
|
|
rs1456372554 CA372793158 |
361 | T>K | No |
ClinGen gnomAD |
|
|
CA372793157 rs1456372554 |
361 | T>R | No |
ClinGen gnomAD |
|
|
CA372793155 rs1165167292 |
362 | H>N | No |
ClinGen gnomAD |
|
|
rs748170215 CA4966370 |
362 | H>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 363 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs143370878 CA4966367 |
363 | D>N | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1192574643 CA372793131 |
365 | A>G | No |
ClinGen gnomAD |
|
|
CA187969913 rs990396714 |
365 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs774148520 CA4966365 |
366 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372793127 rs774148520 |
366 | R>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1488420075 CA372793116 |
368 | A>P | No |
ClinGen gnomAD |
|
|
rs748773649 CA4966363 |
368 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966361 rs769466046 |
370 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372793099 rs769466046 |
370 | H>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372793100 rs769466046 |
370 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1314411579 CA372793094 |
371 | C>F | No |
ClinGen TOPMed |
|
|
rs371181473 CA187969887 |
371 | C>G | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs781632154 CA4966359 |
373 | W>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757550173 CA372793073 |
374 | H>L | No |
ClinGen ExAC gnomAD |
|
|
CA4966358 rs757550173 |
374 | H>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1231174165 CA372793069 |
375 | G>S | No |
ClinGen TOPMed |
|
|
CA4966357 rs188928902 |
376 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4966355 rs377742023 |
377 | P>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA372793057 rs377742023 |
377 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs752848876 CA4966354 |
378 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs929470610 CA372792992 |
379 | D>A | No |
ClinGen TOPMed gnomAD |
|
|
rs929470610 CA187968840 |
379 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1345783357 CA372792978 |
380 | R>K | No |
ClinGen gnomAD |
|
|
CA372792951 rs1238102553 |
382 | V>E | No |
ClinGen gnomAD |
|
|
rs535536927 CA4966334 |
382 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1351357079 CA372792935 |
383 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs766487354 CA4966332 |
387 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs190147284 CA4966333 |
387 | M>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs1337377002 CA372792870 |
388 | K>R | No |
ClinGen gnomAD |
|
|
CA187968818 rs149194557 |
389 | T>A | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA4966331 rs760902576 |
389 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138265520 CA372792842 |
390 | Y>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1402252205 CA372792845 |
390 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1380163480 CA372792833 |
391 | V>D | No |
ClinGen gnomAD |
|
|
rs1380163480 CA372792830 |
391 | V>G | No |
ClinGen gnomAD |
|
|
CA372792802 rs1470336040 |
393 | K>N | No |
ClinGen TOPMed |
|
|
CA372792806 rs763808813 |
393 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763808813 CA4966329 |
393 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966328 rs762893697 |
394 | V>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 395 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs775393848 CA4966327 |
395 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1357503978 CA372792773 |
396 | N>D | No |
ClinGen TOPMed |
|
|
rs201712358 CA187968733 |
396 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1289087880 CA372792065 |
397 | G>S | No |
ClinGen TOPMed |
|
|
rs140589078 CA4966302 |
399 | Y>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1227137056 CA372792028 |
400 | S>A | No |
ClinGen TOPMed |
|
| TCGA novel | 401 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA187964667 rs892082289 |
402 | L>W | No |
ClinGen TOPMed |
|
|
rs146797511 CA372791987 |
403 | V>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs146797511 CA4966301 |
403 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs772602035 CA4966300 |
406 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA4966298 rs774806237 |
407 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1183653313 CA372791933 |
408 | F>L | No |
ClinGen TOPMed |
|
|
rs749736222 CA4966296 |
409 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs780010018 CA4966295 |
410 | C>S | No |
ClinGen ExAC gnomAD |
|
|
rs1330553186 CA372791904 |
411 | I>T | No |
ClinGen Ensembl |
|
|
CA372791908 rs1244840826 |
411 | I>V | No |
ClinGen gnomAD |
|
|
rs554483819 CA4966292 |
412 | D>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs554483819 CA4966293 |
412 | D>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4966294 rs148756256 |
412 | D>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1316868183 CA372791884 |
413 | D>G | No |
ClinGen gnomAD |
|
|
CA372791888 rs1196563253 |
413 | D>Y | No |
ClinGen gnomAD |
|
|
CA4966289 rs3736390 RCV000949749 VAR_051615 |
414 | T>S | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1175467294 CA372791866 |
415 | K>Q | No |
ClinGen TOPMed |
|
|
rs893539915 CA372791856 |
416 | L>H | No |
ClinGen gnomAD |
|
|
rs752514807 CA4966288 |
416 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs893539915 CA187964626 |
416 | L>P | No |
ClinGen gnomAD |
|
|
rs1274766916 CA372791852 |
417 | V>L | No |
ClinGen gnomAD |
|
|
rs1237220732 CA372791838 |
419 | Q>* | No |
ClinGen gnomAD |
|
|
rs1053976555 CA187964624 |
420 | I>V | No |
ClinGen Ensembl |
|
|
CA187964623 rs1000364099 |
421 | I>L | No |
ClinGen gnomAD |
|
|
rs1415890520 CA372791812 |
421 | I>T | No |
ClinGen TOPMed |
|
|
rs565664019 CA4966286 |
422 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA |
|
CA4966285 rs193088045 |
423 | S>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs193088045 CA4966284 |
423 | S>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1482046616 CA372802239 |
426 | I>F | No |
ClinGen TOPMed gnomAD |
|
|
CA372802231 rs1586718041 |
426 | I>M | No |
ClinGen Ensembl |
|
|
CA4966253 rs191107173 |
430 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA187999281 rs191107173 |
430 | P>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4966252 rs150766325 |
432 | I>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA372802145 rs1184986009 |
433 | V>I | No |
ClinGen TOPMed |
|
|
CA372802130 rs1486368362 |
434 | N>I | No |
ClinGen gnomAD |
|
|
CA372802132 rs1486368362 |
434 | N>S | No |
ClinGen gnomAD |
|
|
rs1486368362 CA372802133 |
434 | N>T | No |
ClinGen gnomAD |
|
|
rs1271405697 CA372802117 |
436 | K>E | No |
ClinGen TOPMed |
|
|
rs1586718023 CA372802097 |
437 | Y>* | No |
ClinGen Ensembl |
|
|
CA372802104 rs1354838486 |
437 | Y>F | No |
ClinGen gnomAD |
|
|
rs927988914 CA187999277 |
437 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
CA4966249 rs778020200 |
440 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA372802061 rs1586718015 |
441 | V>G | No |
ClinGen Ensembl |
|
|
CA4966248 rs140920207 |
442 | L>P | No |
ClinGen ESP ExAC gnomAD |
|
|
CA4966245 rs756123588 |
444 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1419060613 CA372802042 |
444 | Y>N | No |
ClinGen gnomAD |
|
|
CA4966244 rs750327882 |
445 | L>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 445 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4966243 rs151222510 |
446 | L>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA372801974 rs1475894334 |
448 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
CA372801969 rs1172441622 |
449 | R>G | No |
ClinGen TOPMed |
|
|
rs142216382 CA4966241 |
450 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4966240 rs763782401 |
451 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372801929 rs1284941872 |
451 | P>L | No |
ClinGen TOPMed |
|
|
rs753139909 CA4966238 |
452 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA4966237 rs760052993 COSM1489925 |
453 | H>D | breast [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1274023085 CA372801904 |
453 | H>L | No |
ClinGen TOPMed gnomAD |
|
|
rs760052993 CA4966236 |
453 | H>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1274023085 CA372801907 |
453 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA4966235 rs777113095 |
454 | T>R | No |
ClinGen ExAC gnomAD |
|
|
CA4966234 rs766482546 |
456 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966233 rs141380780 |
456 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4966232 rs147187141 |
457 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs145168362 CA187999260 |
459 | I>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs145168362 CA4966231 |
459 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA372801818 rs1456197254 |
460 | E>* | No |
ClinGen gnomAD |
|
|
rs1417865503 CA372801811 |
460 | E>D | No |
ClinGen TOPMed |
|
|
rs1456197254 CA372801820 |
460 | E>K | No |
ClinGen gnomAD |
|
|
rs1563826270 CA372801803 |
461 | V>I | No |
ClinGen Ensembl |
|
|
CA372801781 rs1563826269 |
462 | L>P | No |
ClinGen Ensembl |
|
|
rs1366614200 CA372801777 |
463 | Q>* | No |
ClinGen TOPMed |
|
|
CA372801778 rs1366614200 |
463 | Q>E | No |
ClinGen TOPMed |
|
|
CA187999256 rs940592776 |
463 | Q>R | No |
ClinGen Ensembl |
|
|
rs748250721 CA4966230 |
464 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs769698878 CA4966228 |
465 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs553432225 CA4966226 |
466 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4966224 rs534077734 |
467 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA372801690 rs1190035611 |
468 | N>K | No |
ClinGen gnomAD |
|
|
CA372801688 rs1279639246 |
469 | A>P | No |
ClinGen TOPMed |
|
|
CA372801676 rs1372457575 |
469 | A>V | No |
ClinGen TOPMed |
|
|
rs750879430 CA4966195 |
471 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA187999097 rs919572079 |
472 | K>R | No |
ClinGen TOPMed |
|
|
CA4966194 rs767701942 |
473 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA187999094 rs950642048 |
474 | D>A | No |
ClinGen gnomAD |
|
|
CA372801506 rs950642048 |
474 | D>V | No |
ClinGen gnomAD |
|
| TCGA novel | 474 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA187999092 COSM3848312 rs551241677 |
476 | E>K | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes NCI-TCGA gnomAD |
|
CA372801490 rs551241677 |
476 | E>Q | No |
ClinGen 1000Genomes gnomAD |
|
|
rs761766869 COSM3413580 CA4966191 |
478 | R>C | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs377692147 CA4966190 |
478 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377692147 CA372801465 |
478 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA372801448 rs2270889 |
480 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4966188 VAR_051616 rs2270889 |
480 | R>Q | No |
ClinGen UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs772816773 CA4966189 |
480 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372801431 rs1418740043 |
482 | L>F | No |
ClinGen TOPMed |
|
|
rs776574300 CA4966187 |
482 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA372801400 rs760726690 |
485 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966185 rs760726690 |
485 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA187999083 rs1038685311 |
485 | S>P | No |
ClinGen gnomAD |
|
|
rs374667282 CA187999081 |
487 | S>A | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA4966183 rs139577827 |
487 | S>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs139577827 CA4966184 |
487 | S>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 487 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs747629466 CA372801385 |
488 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966182 rs747629466 |
488 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372801361 rs1307482106 |
490 | L>F | No |
ClinGen TOPMed |
|
|
CA4966180 rs748083630 |
490 | L>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372801362 rs748083630 |
490 | L>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000975202 rs60717199 CA4966179 |
492 | S>C | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA4966176 rs750978628 |
493 | Y>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA4966177 rs756429354 |
493 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs2270888 CA187999069 CA4966175 |
497 | H>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs546343746 CA372801285 |
498 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4966173 rs546343746 |
498 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1259746575 CA372801280 |
498 | A>V | No |
ClinGen gnomAD |
|
|
CA4966172 rs150702847 |
499 | Q>E | No |
ClinGen ESP ExAC gnomAD |
|
|
CA372801251 rs1438150996 |
501 | V>E | No |
ClinGen TOPMed |
|
|
CA372801253 rs1487237391 |
501 | V>M | No |
ClinGen gnomAD |
|
| TCGA novel | 502 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4966169 rs766267083 |
503 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA187999062 rs916798207 |
504 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs996835827 CA187999059 |
506 | S>F | No |
ClinGen TOPMed |
|
|
CA4966165 rs142006198 |
507 | A>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4966167 rs773006241 |
507 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966166 COSM178469 rs142006198 |
507 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA187999055 rs983969962 |
508 | C>F | No |
ClinGen gnomAD |
|
|
rs1316872181 CA372801194 |
508 | C>R | No |
ClinGen TOPMed |
|
|
rs148147075 CA187999050 |
512 | S>C | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs148147075 CA372801150 |
512 | S>F | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA372801152 rs1402792016 |
512 | S>P | No |
ClinGen gnomAD |
|
|
CA372801133 rs749006386 |
514 | I>F | No |
ClinGen ExAC gnomAD |
|
|
CA4966162 rs749006386 |
514 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1168548037 CA372801121 |
515 | L>P | No |
ClinGen gnomAD |
|
|
rs1168548037 CA372801119 |
515 | L>R | No |
ClinGen gnomAD |
|
|
CA372801114 rs1477541524 |
516 | G>E | No |
ClinGen gnomAD |
|
|
CA187999049 rs746769927 |
516 | G>R | No |
ClinGen Ensembl |
|
|
rs1586717516 CA372801109 |
517 | S>P | No |
ClinGen Ensembl |
|
|
rs542481095 CA187999046 |
518 | A>D | No |
ClinGen Ensembl |
|
|
CA4966160 rs770243894 |
518 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA4966158 rs781581655 |
519 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs145776780 CA4966157 |
519 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs781581655 CA4966159 |
519 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs370265483 CA4966156 |
521 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA372801087 rs1335022523 |
521 | D>Y | No |
ClinGen gnomAD |
|
| TCGA novel | 522 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs377439229 CA4966154 |
522 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372801067 rs1271261634 |
524 | P>S | No |
ClinGen gnomAD |
|
|
rs140645864 CA4966151 |
526 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4966152 rs765359129 |
526 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA372801040 rs1586717479 |
528 | A>S | No |
ClinGen Ensembl |
|
|
CA372801034 rs1319634173 |
529 | I>N | No |
ClinGen Ensembl |
|
|
CA4966150 rs138884267 |
529 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs761794383 CA4966148 |
530 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs767282708 CA4966149 |
530 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA372801027 rs761794383 |
530 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs892824858 CA187999035 |
531 | S>I | No |
ClinGen Ensembl |
|
|
rs763633720 CA4966146 |
532 | L>W | No |
ClinGen ExAC gnomAD |
|
|
CA4966145 rs762428206 |
534 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966144 rs775015977 |
534 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA4966143 rs769362872 |
535 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs745459172 CA4966142 |
537 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA372800984 rs776874507 |
538 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966141 rs776874507 |
538 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1472940679 CA372800986 |
538 | H>Y | No |
ClinGen TOPMed |
|
|
rs200292238 CA372800981 |
539 | P>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4966139 rs200292238 |
539 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA187999029 rs200292238 |
539 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs201128771 CA372800973 |
540 | G>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA372800977 rs1411088901 |
540 | G>C | No |
ClinGen TOPMed |
|
|
CA4966138 rs201128771 |
540 | G>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs758604090 CA4966137 |
542 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966136 rs369201804 |
542 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA372800950 COSM3745961 rs1303314770 |
544 | G>* | liver [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1191559050 CA372800909 |
548 | I>N | No |
ClinGen TOPMed |
|
|
rs1191559050 CA372800908 |
548 | I>T | No |
ClinGen TOPMed |
|
|
CA4966106 rs764691995 |
551 | H>Q | No |
ClinGen ExAC |
|
|
rs752655706 CA4966107 |
551 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA4966105 rs372347055 |
552 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4966104 rs753488822 |
552 | P>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 553 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA372800875 rs1435155115 |
554 | G>R | No |
ClinGen gnomAD |
|
|
CA4966102 rs560961975 |
555 | H>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1345624364 CA372800861 |
556 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs145029218 CA4966099 |
559 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs774919826 CA372800832 CA4966098 |
560 | W>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768677846 CA4966097 |
561 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749400006 CA4966096 |
562 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs903039148 CA187998805 |
562 | I>T | No |
ClinGen Ensembl |
|
|
rs369722648 CA4966094 |
563 | E>G | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 563 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 563 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1401411520 CA372800790 COSM1554745 |
565 | D>N | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA4966092 rs746040168 |
567 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777592709 CA372800705 |
571 | N>K | No |
ClinGen ExAC TOPMed |
|
|
CA372800707 rs1305894570 |
571 | N>S | No |
ClinGen gnomAD |
|
|
CA372800698 rs1328500705 |
572 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1246412263 CA372800702 |
572 | G>R | No |
ClinGen TOPMed |
|
|
rs540270811 CA187998079 |
576 | C>G | No |
ClinGen TOPMed gnomAD |
|
|
CA4966054 rs759596905 |
577 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA372799325 rs1340105560 |
578 | A>G | No |
ClinGen TOPMed |
|
|
CA187998073 rs201652261 |
578 | A>S | No |
ClinGen Ensembl |
|
|
CA187998075 rs201652261 |
578 | A>T | No |
ClinGen Ensembl |
|
|
CA187998070 rs946626431 |
579 | K>E | No |
ClinGen Ensembl |
|
|
rs776631978 CA4966053 |
580 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA4966052 rs771186255 |
581 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA372799274 rs1235159662 |
581 | L>P | No |
ClinGen gnomAD |
|
|
CA4966051 rs747155246 |
582 | V>I | No |
ClinGen ExAC gnomAD |
|
|
TCGA novel CA4966049 rs768308178 |
583 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen ExAC TOPMed gnomAD |
|
CA4966050 rs774255910 |
583 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1205642072 CA372799219 |
584 | H>L | No |
ClinGen gnomAD |
|
| TCGA novel | 584 | H>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4966048 rs749308426 |
584 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1273160455 CA372799209 |
585 | V>A | No |
ClinGen TOPMed |
|
|
rs149140589 CA4966047 |
585 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4966044 rs756059507 |
586 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA372799193 rs756059507 |
586 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs569177421 CA4966045 |
586 | G>S | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA187998046 rs939033962 |
587 | M>I | No |
ClinGen gnomAD |
|
|
rs1452090072 CA372799149 |
588 | K>T | No |
ClinGen gnomAD |
|
|
CA372799132 rs1201413580 |
589 | N>Y | No |
ClinGen TOPMed |
|
|
rs201493570 CA4966042 |
590 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966041 rs201493570 |
590 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751149439 CA4966039 |
592 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs145193617 CA4966037 |
593 | W>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1201954994 CA372799054 |
594 | A>G | No |
ClinGen gnomAD |
|
|
rs753258892 CA4966036 |
594 | A>T | No |
ClinGen ExAC |
|
|
CA372799029 rs1449582311 |
595 | S>I | No |
ClinGen TOPMed |
|
|
rs1449582311 CA372799032 |
595 | S>N | No |
ClinGen TOPMed |
|
|
CA4966035 rs765743362 |
596 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1586715610 CA372799002 COSM1108062 |
597 | N>D | endometrium [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs1239366741 CA372798989 |
597 | N>S | No |
ClinGen gnomAD |
|
|
rs776719805 CA4966032 COSM1108061 |
598 | R>* | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs776719805 CA372798978 |
598 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4966031 rs766351655 |
598 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs969521278 CA187998025 |
599 | G>D | No |
ClinGen TOPMed |
|
| TCGA novel | 600 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA372798929 rs1337776544 |
602 | I>V | No |
ClinGen gnomAD |
|
|
rs1023147364 CA187998024 |
603 | L>F | No |
ClinGen Ensembl |
|
|
CA187998023 rs965175970 |
603 | L>H | No |
ClinGen TOPMed |
|
|
CA187998022 rs201852844 |
604 | S>F | No |
ClinGen 1000Genomes |
|
|
rs1265034440 CA372798421 |
606 | L>H | No |
ClinGen TOPMed |
|
|
CA372798391 rs1250740570 |
609 | S>G | No |
ClinGen gnomAD |
|
|
CA372798389 rs1250740570 |
609 | S>R | No |
ClinGen gnomAD |
|
|
CA372798376 rs1212737225 |
610 | C>Y | No |
ClinGen gnomAD |
|
|
rs376066313 CA187996780 |
611 | D>H | No |
ClinGen ESP TOPMed |
|
|
CA372798359 rs1291355536 |
612 | L>M | No |
ClinGen gnomAD |
|
|
rs759587102 CA4966005 |
612 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs776426760 CA4966004 |
613 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs770530535 CA4966003 |
615 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs1231053511 CA372798316 |
616 | N>K | No |
ClinGen gnomAD |
|
|
rs1586713935 CA372798320 |
616 | N>S | No |
ClinGen Ensembl |
|
|
rs1175980600 CA372798297 |
619 | K>Q | No |
ClinGen TOPMed |
|
|
rs1369300453 CA372798281 |
620 | A>G | No |
ClinGen gnomAD |
|
|
CA372798275 rs1302909050 |
621 | A>T | No |
ClinGen gnomAD |
|
|
CA4966002 rs746511430 |
621 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1187859234 CA372798262 |
622 | L>R | No |
ClinGen TOPMed |
|
| TCGA novel | 623 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA372798252 rs1351856034 |
623 | K>R | No |
ClinGen gnomAD |
|
| TCGA novel | 624 | S>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs149753101 CA4966000 |
625 | L>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4965999 rs753701694 |
627 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs1169211792 CA372798210 |
627 | P>R | No |
ClinGen gnomAD |
|
|
CA187996751 rs753701694 |
627 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA4965997 rs12171 |
629 | L>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1586713891 CA372798171 |
631 | K>E | No |
ClinGen Ensembl |
|
|
rs750502135 CA4965993 |
632 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750502135 CA4965992 |
632 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750502135 CA4965994 |
632 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372798154 rs1431174756 |
632 | T>S | No |
ClinGen Ensembl |
|
|
rs377530369 CA4965990 |
634 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377530369 CA4965989 |
634 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4965986 rs145258798 |
635 | T>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1312284409 CA372798121 |
635 | T>I | No |
ClinGen TOPMed |
|
|
CA4965988 rs145258798 |
635 | T>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA372798118 rs1274292445 |
636 | S>G | No |
ClinGen gnomAD |
|
|
CA372798112 rs1207967060 |
636 | S>I | No |
ClinGen gnomAD |
|
|
CA372798108 rs1283588860 |
636 | S>R | No |
ClinGen gnomAD |
|
|
rs944946382 CA187996707 |
637 | K>T | No |
ClinGen Ensembl |
|
|
rs371814546 CA4965985 |
638 | G>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4965984 rs760619245 |
639 | I>K | No |
ClinGen ExAC gnomAD |
|
|
rs760619245 CA4965983 |
639 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA372798036 rs1353027796 |
644 | E>Q | No |
ClinGen gnomAD |
|
|
CA372798013 rs1261600196 |
646 | L>M | No |
ClinGen gnomAD |
|
|
CA4965980 rs747865562 |
647 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs773984059 CA4965979 |
648 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200776122 CA187996695 |
649 | T>Y | No |
ClinGen 1000Genomes |
No associated diseases with Q15397
8 regional properties for Q15397
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| repeat | Pumilio RNA-binding repeat | 165 - 200 | IPR001313-1 |
| repeat | Pumilio RNA-binding repeat | 201 - 236 | IPR001313-2 |
| repeat | Pumilio RNA-binding repeat | 237 - 273 | IPR001313-3 |
| repeat | Pumilio RNA-binding repeat | 350 - 385 | IPR001313-4 |
| repeat | Pumilio RNA-binding repeat | 386 - 422 | IPR001313-5 |
| repeat | Pumilio RNA-binding repeat | 424 - 460 | IPR001313-6 |
| domain | CPL domain | 434 - 573 | IPR012959 |
| domain | Pumilio homology domain | 137 - 510 | IPR033133 |
Functions
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| chromosome | A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information. |
| endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). |
| nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| mRNA binding | Binding to messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns. |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| regulation of protein ADP-ribosylation | Any process that modulates the frequency, rate or extent of protein ADP-ribosylation. Protein ADP-ribosylation is the transfer, from NAD, of ADP-ribose to protein amino acids. |
| regulation of translation | Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MEVKGKKQFT | GKSTKTAQEK | NRFHKNSDSG | SSKTFPTRKV | AKEGGPKVTS | RNFEKSITKL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| GKKGVKQFKN | KQQGDKSPKN | KFQPANKFNK | KRKFQPDGRS | DESAAKKPKW | DDFKKKKKEL |
| 130 | 140 | 150 | 160 | 170 | 180 |
| KQSRQLSDKT | NYDIVVRAKQ | MWEILRRKDC | DKEKRVKLMS | DLQKLIQGKI | KTIAFAHDST |
| 190 | 200 | 210 | 220 | 230 | 240 |
| RVIQCYIQYG | NEEQRKQAFE | ELRDDLVELS | KAKYSRNIVK | KFLMYGSKPQ | IAEIIRSFKG |
| 250 | 260 | 270 | 280 | 290 | 300 |
| HVRKMLRHAE | ASAIVEYAYN | DKAILEQRNM | LTEELYGNTF | QLYKSADHRT | LDKVLEVQPE |
| 310 | 320 | 330 | 340 | 350 | 360 |
| KLELIMDEMK | QILTPMAQKE | AVIKHSLVHK | VFLDFFTYAP | PKLRSEMIEA | IREAVVYLAH |
| 370 | 380 | 390 | 400 | 410 | 420 |
| THDGARVAMH | CLWHGTPKDR | KVIVKTMKTY | VEKVANGQYS | HLVLLAAFDC | IDDTKLVKQI |
| 430 | 440 | 450 | 460 | 470 | 480 |
| IISEIISSLP | SIVNDKYGRK | VLLYLLSPRD | PAHTVREIIE | VLQKGDGNAH | SKKDTEVRRR |
| 490 | 500 | 510 | 520 | 530 | 540 |
| ELLESISPAL | LSYLQEHAQE | VVLDKSACVL | VSDILGSATG | DVQPTMNAIA | SLAATGLHPG |
| 550 | 560 | 570 | 580 | 590 | 600 |
| GKDGELHIAE | HPAGHLVLKW | LIEQDKKMKE | NGREGCFAKT | LVEHVGMKNL | KSWASVNRGA |
| 610 | 620 | 630 | 640 | ||
| IILSSLLQSC | DLEVANKVKA | ALKSLIPTLE | KTKSTSKGIE | ILLEKLST |