Q10MG9

PR
Gene name
PHYB (PHYB1)
Protein name
Phytochrome B
Names
Species
Oryza sativa subsp japonica (Rice)
KEGG Pathway
osa:4332623
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

1-56 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q10MG9

Entry ID Method Resolution Chain Position Source
AF-Q10MG9-F1 Predicted AlphaFoldDB

No variants for Q10MG9

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q10MG9

No associated diseases with Q10MG9

2 regional properties for Q10MG9

Type Name Position InterPro Accession
active_site Phosphoglycerate/bisphosphoglycerate mutase, active site 251 - 260 IPR001345
domain 6-phosphofructo-2-kinase 26 - 246 IPR013079

Functions

Description
EC Number
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

3 GO annotations of molecular function

Name Definition
phosphorelay sensor kinase activity Catalysis of the phosphorylation of a histidine residue in response to detection of an extracellular signal such as a chemical ligand or change in environment, to initiate a change in cell state or activity. The two-component sensor is a histidine kinase that autophosphorylates a histidine residue in its active site. The phosphate is then transferred to an aspartate residue in a downstream response regulator, to trigger a response.
photoreceptor activity The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation.
protein homodimerization activity Binding to an identical protein to form a homodimer.

4 GO annotations of biological process

Name Definition
detection of visible light The series of events in which a visible light stimulus is received by a cell and converted into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm.
protein-tetrapyrrole linkage The covalent linking of a tetrapyrrole to a protein.
red, far-red light phototransduction The sequence of reactions within a cell required to convert absorbed photons from red or far-red light into a molecular signal; the red, far-red light range is defined as having a wavelength within the range 660-730 nm.
regulation of DNA-templated transcription Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.

3 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
P93527 PHYB Phytochrome B Sorghum bicolor (Sorghum) (Sorghum vulgare) PR
P14713 PHYB Phytochrome B Arabidopsis thaliana (Mouse-ear cress) PR
P42497 PHYD Phytochrome D Arabidopsis thaliana (Mouse-ear cress) PR
10 20 30 40 50 60
MASGSRATPT RSPSSARPAA PRHQHHHSQS SGGSTSRAGG GGGGGGGGGG GAAAAESVSK
70 80 90 100 110 120
AVAQYTLDAR LHAVFEQSGA SGRSFDYTQS LRASPTPSSE QQIAAYLSRI QRGGHIQPFG
130 140 150 160 170 180
CTLAVADDSS FRLLAYSENT ADLLDLSPHH SVPSLDSSAV PPPVSLGADA RLLFAPSSAV
190 200 210 220 230 240
LLERAFAARE ISLLNPLWIH SRVSSKPFYA ILHRIDVGVV IDLEPARTED PALSIAGAVQ
250 260 270 280 290 300
SQKLAVRAIS RLQALPGGDV KLLCDTVVEY VRELTGYDRV MVYRFHEDEH GEVVAESRRN
310 320 330 340 350 360
NLEPYIGLHY PATDIPQASR FLFRQNRVRM IADCHAAPVR VIQDPALTQP LCLVGSTLRS
370 380 390 400 410 420
PHGCHAQYMA NMGSIASLVM AVIISSGGDD DHNISRGSIP SAMKLWGLVV CHHTSPRCIP
430 440 450 460 470 480
FPLRYACEFL MQAFGLQLNM ELQLAHQLSE KHILRTQTLL CDMLLRDSPT GIVTQSPSIM
490 500 510 520 530 540
DLVKCDGAAL YYHGKYYPLG VTPTEVQIKD IIEWLTMCHG DSTGLSTDSL ADAGYPGAAA
550 560 570 580 590 600
LGDAVSGMAV AYITPSDYLF WFRSHTAKEI KWGGAKHHPE DKDDGQRMHP RSSFKAFLEV
610 620 630 640 650 660
VKSRSLPWEN AEMDAIHSLQ LILRDSFRDS AEGTSNSKAI VNGQVQLGEL ELRGIDELSS
670 680 690 700 710 720
VAREMVRLIE TATVPIFAVD TDGCINGWNA KVAELTGLSV EEAMGKSLVN DLIFKESEET
730 740 750 760 770 780
VNKLLSRALR GDEDKNVEIK LKTFGPEQSK GPIFVIVNAC SSRDYTKNIV GVCFVGQDVT
790 800 810 820 830 840
GQKVVMDKFI NIQGDYKAIV HNPNPLIPPI FASDENTCCS EWNTAMEKLT GWSRGEVVGK
850 860 870 880 890 900
LLVGEVFGNC CRLKGPDALT KFMIVLHNAI GGQDCEKFPF SFFDKNGKYV QALLTANTRS
910 920 930 940 950 960
RMDGEAIGAF CFLQIASPEL QQAFEIQRHH EKKCYARMKE LAYIYQEIKN PLNGIRFTNS
970 980 990 1000 1010 1020
LLEMTDLKDD QRQFLETSTA CEKQMSKIVK DASLQSIEDG SLVLEKGEFS LGSVMNAVVS
1030 1040 1050 1060 1070 1080
QVMIQLRERD LQLIRDIPDE IKEASAYGDQ YRIQQVLCDF LLSMVRFAPA ENGWVEIQVR
1090 1100 1110 1120 1130 1140
PNIKQNSDGT DTMLFLFRFA CPGEGLPPEI VQDMFSNSRW TTQEGIGLSI CRKILKLMGG
1150 1160 1170
EVQYIRESER SFFHIVLELP QPQQAASRGT S