Q10HD0
Gene name |
RCABP89 (Os03g0592500, LOC_Os03g39610, OsJ_011145, OSJNBb0056O10.8) |
Protein name |
Chlorophyll a-b binding protein, chloroplastic |
Names |
LHCII type I CAB, LHCP |
Species |
Oryza sativa subsp japonica (Rice) |
KEGG Pathway |
osa:4333359 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q10HD0
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q10HD0-F1 | Predicted | AlphaFoldDB |
No variants for Q10HD0
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q10HD0 | |||||
No associated diseases with Q10HD0
No regional properties for Q10HD0
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q10HD0 | |||
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| chloroplast thylakoid membrane | The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| photosystem I | A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation). |
| photosystem II | A photosystem that contains a pheophytin-quinone reaction center with associated accessory pigments and electron carriers. In cyanobacteria and chloroplasts, in the presence of light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone, whereas other photosynthetic bacteria carry out anoxygenic photosynthesis and oxidize other compounds to re-reduce the photoreaction center. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| chlorophyll binding | Binding to a chlorophyll; a compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment. |
| metal ion binding | Binding to a metal ion. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| photosynthesis, light harvesting in photosystem I | After a photon of light is absorbed by one of the many chlorophyll molecules, in one of the light-harvesting complexes of an antenna on photosystem I, some of the absorbed energy is transferred to the pair of chlorophyll molecules in the reaction center. |
| response to light stimulus | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light. |
13 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P04784 | WHAB1.6 | Chlorophyll a-b binding protein, chloroplastic | Triticum aestivum (Wheat) | PR |
| P08221 | Chlorophyll a-b binding protein of LHCII type I, chloroplastic | Cucumis sativus (Cucumber) | PR | |
| P12329 | CAB1 | Chlorophyll a-b binding protein 1, chloroplastic | Zea mays (Maize) | PR |
| Q00827 | CAB48 | Chlorophyll a-b binding protein 48, chloroplastic | Zea mays (Maize) | PR |
| P27497 | CAB-M9 | Chlorophyll a-b binding protein M9, chloroplastic | Zea mays (Maize) | PR |
| P12330 | CAB1R | Chlorophyll a-b binding protein 1, chloroplastic | Oryza sativa subsp japonica (Rice) | PR |
| P12331 | CAB2R | Chlorophyll a-b binding protein 2, chloroplastic | Oryza sativa subsp japonica (Rice) | PR |
| P09756 | CAB3 | Chlorophyll a-b binding protein 3, chloroplastic | Glycine max (Soybean) (Glycine hispida) | PR |
| Q8VZ87 | LHCB1.2 | Chlorophyll a-b binding protein 3, chloroplastic | Arabidopsis thaliana (Mouse-ear cress) | PR |
| P0CJ48 | LHCB1.1 | Chlorophyll a-b binding protein 2, chloroplastic | Arabidopsis thaliana (Mouse-ear cress) | PR |
| P04778 | LHCB1.3 | Chlorophyll a-b binding protein 1, chloroplastic | Arabidopsis thaliana (Mouse-ear cress) | PR |
| P07370 | CAB1B | Chlorophyll a-b binding protein 1B, chloroplastic | Solanum lycopersicum (Tomato) (Lycopersicon esculentum) | PR |
| P07369 | CAB3C | Chlorophyll a-b binding protein 3C, chloroplastic | Solanum lycopersicum (Tomato) (Lycopersicon esculentum) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAASALHQTT | SFLGTAPRRD | ELVRRVGDSG | GRITMRRTVK | SAPQSIWYGP | DRPKYLGPFS |
| 70 | 80 | 90 | 100 | 110 | 120 |
| EQTPSYLTGE | FPGDYGWDTA | GLSADPETFA | RNRELEVIHS | RWAMLGALGC | VFPEILSKNG |
| 130 | 140 | 150 | 160 | 170 | 180 |
| VKFGEAVWFK | AGAQIFSEGG | LDYLGNPNLV | HAQSILAIWA | VQVVLMGFVE | GYRVGGGPLG |
| 190 | 200 | 210 | 220 | 230 | 240 |
| EGLDKVYPGG | AFDPLGLADD | PDTFAELKVK | ELKNGRLAMF | SMFGFFVQAI | VTGKGPIENL |
| 250 | 260 | ||||
| FDHVADPVAN | NAWAYATNFV | PGK |