Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

Autoinhibited structure

Activated structure

14 structures for Q10471

Entry ID Method Resolution Chain Position Source
2FFU X-ray 164 A A 75-571 PDB
2FFV X-ray 275 A A/B 75-571 PDB
4D0T X-ray 245 A A/B/C/D/E/F 1-571 PDB
4D0Z X-ray 220 A A/B/C/D/E/F 1-571 PDB
4D11 X-ray 285 A A/B/C/D/E/F 1-571 PDB
5AJN X-ray 167 A A 1-571 PDB
5AJO X-ray 148 A A 1-571 PDB
5AJP X-ray 165 A A 1-571 PDB
5FV9 X-ray 207 A A/B/C/D/E/F 1-571 PDB
5NDF X-ray 230 A A/B/C/D/E/F 1-571 PDB
6E7I X-ray 180 A A 74-571 PDB
6EGS X-ray 270 A A/B 75-571 PDB
6NQT X-ray 305 A A/B/C/D/E/F 1-571 PDB
AF-Q10471-F1 Predicted AlphaFoldDB

437 variants for Q10471

Variant ID(s) Position Change Description Diseaes Association Provenance
RCV001095799
rs1663959543
99 Y>* Congenital disorder of glycosylation, type iit [ClinVar] Yes ClinVar
dbSNP
rs1663960324
VAR_084283
RCV001095796
104 F>S Congenital disorder of glycosylation, type iit CDG2T; loss-of-funtion variant resulting in lack of ApoC-III and IgA1 glycosylation [ClinVar, UniProt] Yes ClinVar
UniProt
dbSNP
CA345181793
RCV001095798
rs1431963909
200 R>* Congenital disorder of glycosylation, type iit Variant assessed as Somatic; 0.0 impact. [ClinVar, NCI-TCGA] Yes ClinGen
ClinVar
NCI-TCGA
TOPMed
dbSNP
gnomAD
VAR_084284 200 R>del CDG2T; loss of ApoC-III glycosylation [UniProt] Yes UniProt
VAR_084285
RCV001095800
rs376870425
210 R>P Congenital disorder of glycosylation, type iit CDG2T; loss of ApoC-III glycosylation [ClinVar, UniProt] Yes ClinVar
dbSNP
UniProt
RCV001095797
rs1665467473
289 Q>* Congenital disorder of glycosylation, type iit [ClinVar] Yes ClinVar
dbSNP
VAR_084287 289 Q>del CDG2T; loss-of-funtion variant resulting in lack of ApoC-III glycosylation; b [UniProt] Yes UniProt
rs1257760025
CA345339867
2 R>P No ClinGen
TOPMed
rs1257760025
CA345339866
2 R>Q No ClinGen
TOPMed
CA1446007
rs776589215
2 R>W No ClinGen
ExAC
gnomAD
CA345339873
rs1258172396
3 R>L No ClinGen
TOPMed
rs1268260848
CA345339870
3 R>W No ClinGen
gnomAD
rs1342052422
CA345339876
4 R>C No ClinGen
TOPMed
rs1244502029
CA345339885
COSM397098
5 S>L lung [Cosmic] No ClinGen
cosmic curated
TOPMed
CA345339881
rs1197074740
5 S>P No ClinGen
gnomAD
TCGA novel 6 R>Q Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA345339914
rs1469154148
10 C>Y No ClinGen
gnomAD
CA39281042
rs865947899
12 A>S No ClinGen
Ensembl
rs769786670
CA1446009
12 A>V No ClinGen
ExAC
gnomAD
rs866780552
CA39281043
20 A>S No ClinGen
Ensembl
rs774695769
CA345339989
21 Y>* No ClinGen
ExAC
TOPMed
gnomAD
rs865806857
CA39281044
22 Y>* No ClinGen
Ensembl
CA345339991
rs1388115514
22 Y>H No ClinGen
TOPMed
gnomAD
rs1332085920
CA345340004
23 M>I No ClinGen
TOPMed
CA345339997
rs1298817264
23 M>L No ClinGen
gnomAD
CA345339998
rs1298817264
23 M>V No ClinGen
gnomAD
CA1446014
rs374592862
24 Y>S No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs1001045258
CA39281045
25 S>L No ClinGen
TOPMed
CA345340021
rs1270537345
26 G>W No ClinGen
gnomAD
rs1553309006 27 G>A Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No NCI-TCGA
CA345340028
rs1327732533
27 G>D Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
NCI-TCGA
gnomAD
CA345340025
rs1162598295
27 G>S No ClinGen
TOPMed
rs867792034
CA39281047
28 G>C No ClinGen
Ensembl
rs868540955
CA39281048
28 G>D No ClinGen
gnomAD
CA1446016
rs753282220
30 A>V No ClinGen
ExAC
TOPMed
gnomAD
rs1182667186
CA345340057
33 G>R No ClinGen
gnomAD
CA345340063
rs1471554514
34 G>R No ClinGen
gnomAD
CA345340065
rs1471554514
34 G>S No ClinGen
gnomAD
rs764659688
CA1446019
35 A>T No ClinGen
ExAC
TOPMed
gnomAD
CA345340086
rs1349948061
38 G>S No ClinGen
gnomAD
CA1446021
rs529277892
40 G>R No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
rs1389610156
CA345340105
41 R>K No ClinGen
gnomAD
CA345168796
rs1369427970
45 W>G No ClinGen
TOPMed
rs1572053828
CA345168809
46 N>D No ClinGen
Ensembl
rs1162120633
CA345168849
48 I>S No ClinGen
gnomAD
rs769701692
CA1446028
48 I>V No ClinGen
ExAC
TOPMed
gnomAD
CA345168865
rs750280888
49 D>E No ClinGen
ExAC
TOPMed
gnomAD
CA345168855
rs1384124277
49 D>H No ClinGen
gnomAD
rs994653305
CA38803858
50 P>R No ClinGen
gnomAD
rs749440793
CA1446030
51 I>V No ClinGen
ExAC
gnomAD
rs770887465
CA1446031
52 K>E No ClinGen
ExAC
gnomAD
CA345168914
rs1226625266
53 K>M No ClinGen
gnomAD
CA345168918
rs1379095432
53 K>N No ClinGen
TOPMed
CA1446032
rs201249198
53 K>Q Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ExAC
NCI-TCGA
TOPMed
gnomAD
rs1255488508
CA345168946
55 D>E No ClinGen
TOPMed
gnomAD
rs1453642241
CA345168942
55 D>G No ClinGen
TOPMed
CA345168938
rs1312064338
55 D>Y No ClinGen
gnomAD
rs759784384
CA1446033
57 H>R No ClinGen
ExAC
TOPMed
gnomAD
rs1230875157
CA345168996
59 S>N No ClinGen
gnomAD
rs149587406
CA1446034
60 N>S No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA1446037
rs764723616
63 E>V No ClinGen
ExAC
gnomAD
rs938667236
CA38803900
65 A>S No ClinGen
TOPMed
rs938667236
CA345169098
65 A>T No ClinGen
TOPMed
CA1446039
rs139259143
66 Q>R No ClinGen
ESP
ExAC
gnomAD
rs1170033446
CA345169317
72 P>L No ClinGen
TOPMed
gnomAD
CA1446040
COSM134007
rs765832960
72 P>S skin [Cosmic] No ClinGen
cosmic curated
ExAC
gnomAD
rs184261638
CA1446062
77 R>Q No ClinGen
1000Genomes
ExAC
gnomAD
COSM905335
CA1446061
rs759042777
77 R>W endometrium [Cosmic] No ClinGen
cosmic curated
ExAC
gnomAD
CA345176602
rs1210569898
81 F>L No ClinGen
gnomAD
CA1446063
rs752268502
81 F>L No ClinGen
ExAC
TOPMed
gnomAD
CA38820873
rs200978844
83 Q>* No ClinGen
1000Genomes
ExAC
gnomAD
CA1446065
rs200978844
83 Q>E No ClinGen
1000Genomes
ExAC
gnomAD
rs1477223154
CA345176643
87 V>I No ClinGen
gnomAD
rs757194280
CA1446067
88 G>A No ClinGen
ExAC
gnomAD
CA1446068
rs778993510
89 G>R No ClinGen
ExAC
gnomAD
rs1326959932
CA345176664
90 T>M No ClinGen
gnomAD
CA345176683
rs1227782777
93 R>H No ClinGen
TOPMed
gnomAD
CA345176687
rs1157676039
94 S>P No ClinGen
gnomAD
rs949092593
CA38820883
95 G>R Variant assessed as Somatic; 9.239e-05 impact. [NCI-TCGA] No ClinGen
NCI-TCGA
TOPMed
gnomAD
rs1370421490
CA345176727
100 A>T Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
NCI-TCGA
TOPMed
rs748654828
COSM346227
CA1446075
101 R>H lung [Cosmic] No ClinGen
cosmic curated
ExAC
TOPMed
gnomAD
CA1446076
rs748654828
101 R>L No ClinGen
ExAC
TOPMed
gnomAD
CA345176741
rs1350925127
102 N>S No ClinGen
gnomAD
CA345176746
rs1255660969
103 K>E No ClinGen
gnomAD
rs557579820
CA1446078
105 N>S No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
CA1446077
rs773695703
105 N>Y No ClinGen
ExAC
gnomAD
CA1446079
rs767782077
107 V>L No ClinGen
ExAC
gnomAD
rs775232408
CA1446080
108 E>Q No ClinGen
ExAC
TOPMed
gnomAD
rs763955106
CA1446082
111 K>E No ClinGen
ExAC
gnomAD
CA1446083
COSM905336
rs753646036
113 R>* endometrium Variant assessed as Somatic; 4.619e-05 impact. [Cosmic, NCI-TCGA] No ClinGen
cosmic curated
ExAC
NCI-TCGA
TOPMed
gnomAD
rs749888628
CA1446084
113 R>L No ClinGen
ExAC
TOPMed
gnomAD
CA1446085
rs749888628
113 R>Q Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ExAC
NCI-TCGA
TOPMed
gnomAD
rs1558138360
CA345176820
114 M>L No ClinGen
Ensembl
rs750356760
CA1446086
114 M>R No ClinGen
ExAC
gnomAD
rs758579528
CA1446087
115 D>N No ClinGen
ExAC
gnomAD
CA1446088
rs779946304
117 A>T No ClinGen
ExAC
gnomAD
rs773341119
CA38820990
119 P>L No ClinGen
TOPMed
rs1473143485
CA345176854
119 P>S No ClinGen
TOPMed
gnomAD
rs143344842
CA1446089
120 D>H No ClinGen
1000Genomes
ExAC
gnomAD
CA38821002
rs888284862
121 T>I No ClinGen
TOPMed
gnomAD
CA345176867
rs888284862
121 T>S No ClinGen
TOPMed
gnomAD
CA345176871
rs1558138402
122 R>Q No ClinGen
Ensembl
CA345176882
rs1411780938
124 D>N No ClinGen
gnomAD
CA1446113
rs771408585
CA345179899
125 Q>H No ClinGen
ExAC
TOPMed
gnomAD
CA345176895
rs1424223394
125 Q>R No ClinGen
gnomAD
rs1572118942
CA345179915
126 C>G No ClinGen
Ensembl
rs556141120
CA1446115
128 R>Q No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
CA1446114
rs779465339
128 R>W Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ExAC
NCI-TCGA
gnomAD
rs768184760
CA1446116
130 Q>E No ClinGen
ExAC
TOPMed
gnomAD
rs374359790
CA345180044
130 Q>H No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs776457679
CA1446117
130 Q>L No ClinGen
ExAC
gnomAD
TCGA novel 131 W>* Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA38804312
rs971064511
131 W>R No ClinGen
Ensembl
rs151140953
CA1446120
132 R>Q Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ESP
ExAC
NCI-TCGA
TOPMed
gnomAD
rs34322892
CA1446119
132 R>W No ClinGen
1000Genomes
ESP
ExAC
TOPMed
rs184677007
CA1446121
133 V>G No ClinGen
ExAC
gnomAD
rs189511451
CA1446124
134 D>G No ClinGen
ExAC
gnomAD
rs993912144
CA38804335
136 P>L No ClinGen
TOPMed
rs1366622686
CA345180258
139 S>G No ClinGen
TOPMed
rs570007994
CA345180286
140 V>L No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
rs570007994
CA1446128
140 V>M No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
rs757622597
CA1446131
146 N>D No ClinGen
ExAC
gnomAD
rs1323427479
CA345180549
154 R>M No ClinGen
gnomAD
CA38804396
rs866994498
155 T>I No ClinGen
Ensembl
rs747805002
CA1446136
156 V>M No ClinGen
ExAC
TOPMed
gnomAD
rs867471107
CA38804404
157 V>F No ClinGen
Ensembl
rs143842900 158 S>= Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No NCI-TCGA
CA1446137
rs751888471
158 S>R No ClinGen
ExAC
gnomAD
rs1291335161
CA345181505
159 V>L No ClinGen
TOPMed
gnomAD
CA345181503
rs1291335161
159 V>M No ClinGen
TOPMed
gnomAD
TCGA novel 161 K>N Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs545023670
CA1446167
163 S>C No ClinGen
1000Genomes
ExAC
gnomAD
CA1446168
rs141843529
164 P>L No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
rs141843529
CA1446169
164 P>R No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA1446171
rs765521422
166 H>L No ClinGen
ExAC
TOPMed
gnomAD
CA345181557
rs1449685325
167 L>I No ClinGen
gnomAD
CA345181561
rs1256229338
168 I>L No ClinGen
gnomAD
CA345181597
COSM1501189
rs1161216760
172 I>M lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] No ClinGen
cosmic curated
NCI-TCGA
TOPMed
gnomAD
rs767038978
CA1446174
179 N>S No ClinGen
ExAC
gnomAD
rs537078461
CA1446176
181 P>A No ClinGen
ExAC
gnomAD
rs1177338784
CA345181676
181 P>L No ClinGen
TOPMed
gnomAD
COSM261064
rs537078461
CA1446175
181 P>S Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
ExAC
NCI-TCGA
gnomAD
rs766809206
CA1446192
183 D>N No ClinGen
ExAC
gnomAD
rs1405399961
CA345181692
184 G>R No ClinGen
TOPMed
CA38805095
rs1048066861
185 A>D No ClinGen
TOPMed
gnomAD
TCGA novel 185 A>L Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
TCGA novel 185 A>T Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA38805115
rs888099654
186 L>F No ClinGen
TOPMed
gnomAD
rs753448367
CA1446196
188 G>E No ClinGen
ExAC
gnomAD
CA1446197
rs374087942
190 I>T No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA345181747
rs1325567001
192 K>R No ClinGen
gnomAD
CA345181750
rs1411558793
193 V>M No ClinGen
TOPMed
CA1446200
COSM1207848
rs750040941
194 R>* Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
ExAC
NCI-TCGA
gnomAD
rs779769225
CA1446201
194 R>Q No ClinGen
ExAC
TOPMed
gnomAD
CA1446203
rs552559804
195 V>I No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
rs552559804
CA345181759
195 V>L No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
rs1200412234
CA345181766
196 L>F No ClinGen
TOPMed
rs780976469
CA1446204
196 L>P No ClinGen
ExAC
CA345181786
rs1475265774
199 D>N No ClinGen
gnomAD
CA345181792
rs1431963909
200 R>G No ClinGen
TOPMed
gnomAD
CA1446207
rs369808855
200 R>L No ClinGen
ESP
ExAC
TOPMed
gnomAD
COSM905338
CA1446206
rs369808855
200 R>Q Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
ESP
ExAC
NCI-TCGA
TOPMed
gnomAD
CA345181798
rs1005858133
201 R>P No ClinGen
gnomAD
rs1005858133
CA38805179
201 R>Q Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
NCI-TCGA
gnomAD
CA345181812
rs1438859528
202 E>D No ClinGen
TOPMed
CA345183231
rs1277233673
205 M>T No ClinGen
gnomAD
rs761032669
CA1446232
206 R>C Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ExAC
NCI-TCGA
gnomAD
CA1446233
rs764812990
206 R>H Variant assessed as Somatic; 5.946e-05 impact. [NCI-TCGA] No ClinGen
ExAC
NCI-TCGA
gnomAD
rs762432658
CA1446235
208 R>W No ClinGen
ExAC
TOPMed
gnomAD
rs376870425
CA345183302
210 R>L No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA1446237
rs376870425
210 R>Q No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA38810037
rs139591495
210 R>W Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ESP
NCI-TCGA
TOPMed
CA1446239
rs145628006
212 A>T No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
rs1232362181
CA345183326
212 A>V No ClinGen
gnomAD
CA345183347
rs1158121783
213 D>E No ClinGen
TOPMed
CA38810074
rs757320940
213 D>N No ClinGen
TOPMed
gnomAD
rs901114273
CA38810075
215 A>V No ClinGen
TOPMed
rs1383646483
CA345183378
216 Q>E No ClinGen
gnomAD
CA1446241
rs142046356
216 Q>H No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA1446242
rs755938044
218 K>N No ClinGen
ExAC
TOPMed
gnomAD
CA345183499
rs1184369150
223 L>V No ClinGen
TOPMed
CA1446245
rs757381636
225 S>G No ClinGen
ExAC
gnomAD
TCGA novel 227 C>Y Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA345183596
rs1452772784
228 E>K No ClinGen
TOPMed
gnomAD
CA1446248
rs772502318
230 N>S No ClinGen
ExAC
gnomAD
CA1446250
rs747399816
231 E>D No ClinGen
ExAC
gnomAD
CA1446249
rs775654688
231 E>K No ClinGen
ExAC
gnomAD
TCGA novel 231 E>Q Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA1446251
COSM1738507
rs370170142
232 H>Q haematopoietic_and_lymphoid_tissue [Cosmic] No ClinGen
cosmic curated
ESP
ExAC
TOPMed
gnomAD
CA345183681
rs1341984740
232 H>Y No ClinGen
gnomAD
rs1461793378
CA345183730
235 E>G No ClinGen
gnomAD
rs1205669956
CA345183734
236 P>A No ClinGen
gnomAD
rs762487680
CA1446253
236 P>H No ClinGen
ExAC
gnomAD
CA345183735
rs1205669956
236 P>S No ClinGen
gnomAD
TCGA novel 238 L>R Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs201212164
CA1446256
242 A>V Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
1000Genomes
ExAC
NCI-TCGA
TOPMed
gnomAD
VAR_049240
rs1923950
245 R>H No UniProt
dbSNP
rs1270941733
CA345184345
COSM1501187
245 R>K lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] No ClinGen
cosmic curated
Ensembl
NCI-TCGA
rs760418370
CA1446279
247 R>Q No ClinGen
ExAC
TOPMed
gnomAD
CA1446278
rs775177578
247 R>W Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ExAC
NCI-TCGA
TOPMed
gnomAD
CA1446281
rs753841195
COSM905339
254 D>N Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
ExAC
NCI-TCGA
TOPMed
gnomAD
CA1446283
rs765263970
257 N>H No ClinGen
ExAC
gnomAD
CA1446284
rs750530614
258 M>T No ClinGen
ExAC
gnomAD
rs758479260
CA1446285
259 D>N No ClinGen
ExAC
gnomAD
rs150471503
CA1446286
260 N>S No ClinGen
ESP
ExAC
CA38812820
rs200615574
263 Y>* No ClinGen
ExAC
gnomAD
CA38812825
rs951304412
265 G>R No ClinGen
TOPMed
VAR_084286 271 K>R likely benign variant; does not affect ApoC-III glycosylation [UniProt] No UniProt
rs142736956 272 G>= Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No NCI-TCGA
CA1446309
rs756448084
274 F>C No ClinGen
ExAC
gnomAD
CA345184838
rs1412645326
276 W>G No ClinGen
gnomAD
rs749754600
CA1446311
278 L>S No ClinGen
ExAC
CA1446312
rs757862876
279 V>G No ClinGen
ExAC
gnomAD
rs1431586064
CA345184906
285 M>V No ClinGen
TOPMed
CA345184918
COSM905343
rs1479348442
286 T>M Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
NCI-TCGA
TOPMed
gnomAD
TCGA novel 286 T>P Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs768484528
CA1446315
288 E>K No ClinGen
ExAC
gnomAD
CA38815332
rs878878591
289 Q>R No ClinGen
Ensembl
CA345184953
rs776404910
290 R>G No ClinGen
ExAC
gnomAD
CA345184967
rs1413457927
291 R>K No ClinGen
gnomAD
rs1429490496
CA345184972
291 R>S No ClinGen
gnomAD
rs769587065
CA1446318
292 S>F No ClinGen
ExAC
gnomAD
CA38815369
rs201131857
293 R>Q No ClinGen
ESP
TOPMed
gnomAD
CA1446319
rs773042550
293 R>W Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ExAC
NCI-TCGA
gnomAD
CA1446325
rs1553273633
299 A>D No ClinGen
Ensembl
CA1446324
rs199925000
299 A>T No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA345185084
rs1336407333
301 I>T No ClinGen
gnomAD
TCGA novel 305 M>* Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA345185337
rs1358319771
305 M>L No ClinGen
gnomAD
TCGA novel 305 M>T Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs565300791
CA1446353
313 M>I No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
CA1446354
rs78164071
314 D>A No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA345185554
rs1273724569
314 D>E No ClinGen
gnomAD
CA345185565
rs1373498080
315 K>E No ClinGen
gnomAD
CA1446355
rs765888501
317 Y>H No ClinGen
ExAC
TOPMed
gnomAD
rs750924674
CA1446356
321 L>R No ClinGen
ExAC
gnomAD
CA1446358
rs780788137
322 G>E No ClinGen
ExAC
gnomAD
CA1446357
rs754553613
322 G>R No ClinGen
ExAC
CA1446359
COSM1560198
rs752400838
323 K>R large_intestine [Cosmic] No ClinGen
cosmic curated
ExAC
TOPMed
gnomAD
rs764955190
CA38816480
325 D>Y No ClinGen
Ensembl
rs1490001955
CA345186006
326 M>V No ClinGen
gnomAD
rs777276912
CA1446361
327 M>I No ClinGen
ExAC
gnomAD
TCGA novel 329 D>N Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA345186058
rs1222006987
329 D>V No ClinGen
TOPMed
CA345186084
rs1471203097
331 W>* No ClinGen
gnomAD
rs1572137960
CA345186128
335 N>T No ClinGen
Ensembl
CA1446384
rs758390037
338 I>V No ClinGen
ExAC
gnomAD
CA1446385
rs779947137
339 S>L Variant assessed as Somatic; impact. [NCI-TCGA] No ClinGen
ExAC
NCI-TCGA
gnomAD
CA345186776
rs1217411561
341 R>C No ClinGen
gnomAD
CA38820671
rs755413572
341 R>H Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
NCI-TCGA
TOPMed
gnomAD
rs372846843
CA1446388
342 V>M No ClinGen
ESP
ExAC
TOPMed
gnomAD
TCGA novel 346 G>R Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs1205731880
CA345186815
347 G>S No ClinGen
gnomAD
rs1471662749
CA345186826
348 S>I No ClinGen
TOPMed
rs977921868
CA38820698
348 S>R No ClinGen
TOPMed
CA345186833
rs1440430510
350 E>K No ClinGen
gnomAD
TCGA novel 350 E>Q Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs558526134
CA38820715
351 I>T No ClinGen
Ensembl
rs1476348677
CA345186862
354 C>S No ClinGen
gnomAD
rs773776380
CA38820730
356 R>H No ClinGen
ExAC
TOPMed
gnomAD
rs773776380
CA1446391
356 R>L No ClinGen
ExAC
TOPMed
gnomAD
rs1178087389
CA345186900
360 V>M No ClinGen
gnomAD
rs1279521995
CA345186910
361 F>S No ClinGen
TOPMed
TCGA novel 362 R>G Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs1395137158
CA345186915
362 R>Q No ClinGen
TOPMed
gnomAD
CA1446394
rs774689179
362 R>W No ClinGen
ExAC
gnomAD
rs763455843
CA1446396
366 P>R No ClinGen
ExAC
gnomAD
rs1273489757
CA345186953
367 Y>F No ClinGen
gnomAD
rs1324319545
CA345186957
368 T>A No ClinGen
TOPMed
gnomAD
rs756971127
COSM140403
CA1446398
368 T>M skin [Cosmic] No ClinGen
cosmic curated
ExAC
TOPMed
gnomAD
rs1324319545
CA345186958
368 T>S No ClinGen
TOPMed
gnomAD
CA1446400
rs376128700
370 P>L Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ESP
ExAC
NCI-TCGA
TOPMed
gnomAD
CA345186980
rs1157754472
372 G>S No ClinGen
TOPMed
rs1262096658
CA345186997
374 G>D No ClinGen
gnomAD
rs1209786297
CA345187003
375 T>I No ClinGen
gnomAD
CA345187006
rs1489151676
376 V>I No ClinGen
gnomAD
rs1480752948 378 A>= Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No NCI-TCGA
rs1262417562
CA345187025
378 A>V No ClinGen
gnomAD
rs780074971
CA1446402
379 R>* No ClinGen
ExAC
gnomAD
rs746876922
CA1446403
379 R>Q No ClinGen
ExAC
TOPMed
gnomAD
rs969720106
CA38832007
380 N>D No ClinGen
Ensembl
CA345188046
rs1443920478
381 T>A No ClinGen
TOPMed
rs1292294067
CA345188060
382 R>C No ClinGen
TOPMed
gnomAD
rs1389631551
CA345188064
382 R>H Variant assessed as Somatic; impact. [NCI-TCGA] No ClinGen
NCI-TCGA
TOPMed
rs1453981251
CA345188080
383 R>Q No ClinGen
gnomAD
rs374726944
CA1446419
383 R>W No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs1174154735
CA345188093
384 A>V No ClinGen
TOPMed
rs766034985
CA1446420
389 M>I No ClinGen
ExAC
rs1558167505
CA345188172
389 M>T No ClinGen
Ensembl
rs1392060088
CA345188239
393 K>R No ClinGen
gnomAD
rs751515152
CA1446421
394 N>D No ClinGen
ExAC
gnomAD
COSM1295981
CA1446422
COSM1339994
rs754934176
395 F>L Variant assessed as Somatic; 0.0 impact. large_intestine urinary_tract [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
ExAC
NCI-TCGA
TOPMed
gnomAD
rs200611252
CA38832035
396 Y>C No ClinGen
1000Genomes
CA345188321
rs1239783153
398 A>E No ClinGen
gnomAD
rs1393338606
CA345188318
398 A>S No ClinGen
TOPMed
TCGA novel 399 A>T Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs1308246065
CA345188351
400 V>A No ClinGen
gnomAD
rs1263640208
CA345188384
403 A>T No ClinGen
gnomAD
CA1446425
rs756232267
403 A>V No ClinGen
ExAC
gnomAD
CA1446426
rs778173705
404 R>I No ClinGen
ExAC
TOPMed
gnomAD
rs749472707
CA1446427
406 V>I No ClinGen
ExAC
TOPMed
gnomAD
CA38832063
rs920316095
408 Y>C No ClinGen
Ensembl
rs1027958131
CA38832071
410 N>H No ClinGen
TOPMed
rs1038245428
CA38832221
411 I>V No ClinGen
TOPMed
gnomAD
TCGA novel 414 R>T Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs1275099915
CA345189151
416 E>Q No ClinGen
TOPMed
CA1446444
rs756285254
422 S>G No ClinGen
ExAC
TOPMed
gnomAD
rs1361366512
CA345189266
423 C>F No ClinGen
TOPMed
CA1446446
rs753962261
424 K>N No ClinGen
ExAC
gnomAD
rs1465191667
CA345189290
424 K>R No ClinGen
gnomAD
rs757478232
CA1446447
425 P>S No ClinGen
ExAC
gnomAD
rs779172012
CA1446448
426 F>C Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ExAC
NCI-TCGA
gnomAD
rs772439449
CA1446450
427 K>E No ClinGen
ExAC
gnomAD
rs747505499
CA38832249
431 E>D No ClinGen
TOPMed
gnomAD
rs1315473228
CA345189413
432 N>S No ClinGen
TOPMed
gnomAD
rs540616116
CA1446452
433 V>I No ClinGen
ExAC
gnomAD
TCGA novel 434 Y>C Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs574340854
CA1446454
435 P>S No ClinGen
1000Genomes
ExAC
gnomAD
TCGA novel 437 L>* Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA345189959
rs773899327
438 R>S No ClinGen
ExAC
TOPMed
gnomAD
rs762515605
CA1446455
438 R>T No ClinGen
ExAC
gnomAD
CA345189974
rs1190788315
441 D>H No ClinGen
gnomAD
CA345189999
rs1267330568
444 D>Y No ClinGen
TOPMed
CA345190009
rs1441817635
445 I>T No ClinGen
gnomAD
CA1446476
rs201830158
445 I>V No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA345190031
COSM1501185
rs1169786024
449 A>T lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] No ClinGen
cosmic curated
NCI-TCGA
gnomAD
TCGA novel 449 A>V Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs775483437
CA1446478
451 Q>H No ClinGen
ExAC
TOPMed
gnomAD
CA1446477
rs771998260
451 Q>R No ClinGen
ExAC
gnomAD
rs760523823
CA1446479
453 G>A No ClinGen
ExAC
gnomAD
rs760523823
CA345190061
453 G>E No ClinGen
ExAC
gnomAD
TCGA novel 454 T>A Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs764166270
CA1446480
454 T>I No ClinGen
ExAC
gnomAD
CA1446481
rs776668471
455 N>D No ClinGen
ExAC
gnomAD
rs761819563
CA1446482
455 N>K No ClinGen
ExAC
gnomAD
CA345190089
rs1307519065
458 D>H No ClinGen
gnomAD
CA345190109
rs1257512222
461 G>R No ClinGen
TOPMed
TCGA novel 466 G>D Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA345190146
rs1223856596
466 G>R No ClinGen
TOPMed
rs1229327197
CA345190151
467 V>M No ClinGen
gnomAD
CA345190157
rs1292682267
468 V>I No ClinGen
gnomAD
CA345190167
rs1281240445
469 G>A No ClinGen
TOPMed
CA1446485
rs758709049
472 E>G No ClinGen
ExAC
gnomAD
rs1233588629
CA345190191
473 C>R No ClinGen
gnomAD
TCGA novel 475 N>D Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs766578798
CA1446486
475 N>S No ClinGen
ExAC
TOPMed
gnomAD
TCGA novel 477 G>E Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs1396316556
CA345191105
482 W>* No ClinGen
gnomAD
TCGA novel 482 W>C Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA345191121
rs1336541907
483 A>D Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
NCI-TCGA
gnomAD
CA345191117
rs140514370
483 A>S No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA1446514
rs140514370
483 A>T No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA1446515
rs746599730
485 T>M No ClinGen
ExAC
gnomAD
CA1446517
rs377338023
486 K>M No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA345191162
rs377338023
486 K>R No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA1446519
rs769823155
489 S>L No ClinGen
ExAC
gnomAD
CA1446521
rs763053572
490 V>A No ClinGen
ExAC
TOPMed
gnomAD
CA345191218
rs1202461866
490 V>L No ClinGen
TOPMed
gnomAD
rs1202461866
CA345191216
490 V>M No ClinGen
TOPMed
gnomAD
TCGA novel
rs774570005
CA1446523
493 M>L Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
ClinGen
ExAC
TOPMed
gnomAD
CA1446524
VAR_084288
rs774570005
493 M>V likely benign variant; does not affect ApoC-III glycosylation [UniProt] No ClinGen
UniProt
ExAC
TOPMed
dbSNP
gnomAD
rs767630739
CA1446525
494 D>G No ClinGen
ExAC
TOPMed
gnomAD
rs760917633
CA1446527
495 L>S No ClinGen
ExAC
gnomAD
rs149595757
CA345191330
497 L>I No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs149595757
CA1446528
497 L>V No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs757993288
CA1446530
498 T>I No ClinGen
ExAC
gnomAD
CA1446529
rs754346905
498 T>P No ClinGen
ExAC
gnomAD
CA38838556
rs138151523
499 V>L No ClinGen
ESP
TOPMed
gnomAD
rs147219046
CA1446532
502 R>G No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA345191387
rs144216012
502 R>P No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
rs144216012
CA1446533
502 R>Q No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
COSM1339997
rs147219046
CA1446531
502 R>W Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
ESP
ExAC
NCI-TCGA
TOPMed
gnomAD
rs780690390
CA1446534
503 A>S No ClinGen
ExAC
TOPMed
gnomAD
rs780690390
CA38838572
503 A>T No ClinGen
ExAC
TOPMed
gnomAD
rs1277634545
CA345191398
503 A>V No ClinGen
gnomAD
CA1446535
rs769518691
504 P>L No ClinGen
ExAC
TOPMed
gnomAD
CA345191418
rs1424193071
505 G>C No ClinGen
TOPMed
rs1358058941
CA345191420
505 G>D No ClinGen
Ensembl
CA345191477
rs1342554353
509 K>N No ClinGen
gnomAD
CA345191487
rs1572164829
510 L>R No ClinGen
Ensembl
rs370275711
CA1446538
512 G>S No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA1446539
rs771005428
514 R>* No ClinGen
ExAC
gnomAD
rs527685112
CA1446540
514 R>Q No ClinGen
ExAC
TOPMed
gnomAD
rs759599137
CA1446541
515 E>* No ClinGen
ExAC
gnomAD
CA1446542
rs772377224
516 N>S No ClinGen
ExAC
gnomAD
CA345191578
rs1200487891
517 D>N No ClinGen
gnomAD
CA345191617
rs1159628708
519 R>K No ClinGen
gnomAD
rs372150000
CA1446546
520 Q>H No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA1446545
rs544481491
520 Q>R No ClinGen
1000Genomes
ExAC
gnomAD
TCGA novel 522 W>* Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
TCGA novel 523 E>D Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
TCGA novel 525 I>T Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs149914257
CA1446577
526 E>K No ClinGen
ESP
ExAC
gnomAD
CA1446578
rs528256081
527 G>D No ClinGen
1000Genomes
ExAC
gnomAD
rs780061153
CA1446579
528 N>S No ClinGen
ExAC
TOPMed
gnomAD
rs1410130049
CA345194133
529 S>C No ClinGen
TOPMed
gnomAD
CA345194142
rs1418892587
530 K>E No ClinGen
gnomAD
rs1186054078
CA345194151
530 K>R No ClinGen
gnomAD
rs1186054078
CA345194149
530 K>T Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
NCI-TCGA
gnomAD
CA1446582
rs141375194
534 V>M No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA345194245
rs1407202003
535 G>D No ClinGen
TOPMed
CA345194259
rs1467293084
536 S>R No ClinGen
gnomAD
CA1446583
rs748557947
537 N>K No ClinGen
ExAC
gnomAD
rs1041571686
CA38841626
541 D>N No ClinGen
TOPMed
rs770238687
CA1446584
542 S>G No ClinGen
ExAC
gnomAD
rs1046665269
CA38841632
543 R>C No ClinGen
gnomAD
rs1046665269
CA345194392
543 R>G No ClinGen
gnomAD
CA1446585
rs201604838
543 R>H No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
CA1446587
rs763304846
544 T>K No ClinGen
ExAC
TOPMed
gnomAD
CA1446586
rs763304846
544 T>M No ClinGen
ExAC
TOPMed
gnomAD
rs1354219221
CA345194416
545 A>S No ClinGen
gnomAD
CA345194462
rs1055446097
547 S>I No ClinGen
gnomAD
CA38841650
rs1055446097
547 S>N No ClinGen
gnomAD
COSM3804289
CA1446591
rs763766688
548 G>R Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
ExAC
NCI-TCGA
TOPMed
gnomAD
rs763766688
CA1446590
548 G>W No ClinGen
ExAC
TOPMed
gnomAD
rs1176284236
CA345194493
549 G>S No ClinGen
TOPMed
rs1005935229
CA38841674
552 V>M No ClinGen
TOPMed
gnomAD
CA1446593
rs761608167
553 E>K No ClinGen
ExAC
gnomAD
rs2273970
VAR_019575
CA1446594
554 V>M No ClinGen
UniProt
1000Genomes
ESP
ExAC
TOPMed
dbSNP
gnomAD
rs1440269810
CA345194641
557 P>A No ClinGen
TOPMed
rs755670523
CA1446597
557 P>L No ClinGen
ExAC
TOPMed
gnomAD
rs755073372
CA1446599
559 L>I No ClinGen
ExAC
TOPMed
gnomAD
rs201753922
CA38841714
560 S>A No ClinGen
Ensembl
rs763060989
CA1446600
COSM1207850
560 S>L large_intestine [Cosmic] No ClinGen
cosmic curated
ExAC
TOPMed
gnomAD
rs1467414336
CA345194726
562 Q>E No ClinGen
gnomAD
CA38841725
rs910517390
564 K>T No ClinGen
Ensembl
rs1374739963
CA345194807
566 T>M No ClinGen
gnomAD
rs1572169910
CA345194795
566 T>P No ClinGen
Ensembl
rs1302271982
CA345194815
567 L>I No ClinGen
TOPMed
rs371254497
CA345194820
567 L>P No ClinGen
ESP
ExAC
gnomAD
rs371254497
CA1446604
567 L>R No ClinGen
ESP
ExAC
gnomAD
rs1558176463
CA345194825
568 N>H No ClinGen
Ensembl
rs774891271
CA1446606
568 N>K No ClinGen
ExAC
TOPMed
gnomAD
rs1572169947
CA345194832
568 N>T No ClinGen
Ensembl
CA345194859
rs1313637903
570 Q>K No ClinGen
gnomAD
CA1446607
rs201539108
571 Q>* No ClinGen
ExAC
gnomAD
rs1280146309
CA345194899
572 Q>Q No ClinGen
gnomAD

1 associated diseases with Q10471

[MIM: 618885]: Congenital disorder of glycosylation 2T (CDG2T)

A form of congenital disorder of glycosylation, a genetically heterogeneous group of multisystem disorders caused by a defect in glycoprotein biosynthesis and characterized by under-glycosylated serum glycoproteins. Congenital disorders of glycosylation result in a wide variety of clinical features, such as defects in the nervous system development, psychomotor retardation, dysmorphic features, hypotonia, coagulation disorders, and immunodeficiency. The broad spectrum of features reflects the critical role of N-glycoproteins during embryonic development, differentiation, and maintenance of cell functions. CDG2T is an autosomal recessive form characterized by global developmental delay, intellectual disability with language deficit, autistic features, behavioral abnormalities, epilepsy, chronic insomnia, white matter changes on brain imaging, dysmorphic features, decreased stature, and decreased high density lipoprotein cholesterol levels. {ECO:0000269|PubMed:27508872, ECO:0000269|PubMed:32293671}. Note=The disease is caused by variants affecting the gene represented in this entry.

Without disease ID
  • A form of congenital disorder of glycosylation, a genetically heterogeneous group of multisystem disorders caused by a defect in glycoprotein biosynthesis and characterized by under-glycosylated serum glycoproteins. Congenital disorders of glycosylation result in a wide variety of clinical features, such as defects in the nervous system development, psychomotor retardation, dysmorphic features, hypotonia, coagulation disorders, and immunodeficiency. The broad spectrum of features reflects the critical role of N-glycoproteins during embryonic development, differentiation, and maintenance of cell functions. CDG2T is an autosomal recessive form characterized by global developmental delay, intellectual disability with language deficit, autistic features, behavioral abnormalities, epilepsy, chronic insomnia, white matter changes on brain imaging, dysmorphic features, decreased stature, and decreased high density lipoprotein cholesterol levels. {ECO:0000269|PubMed:27508872, ECO:0000269|PubMed:32293671}. Note=The disease is caused by variants affecting the gene represented in this entry.

3 regional properties for Q10471

Type Name Position InterPro Accession
domain Ricin B, lectin domain 441 - 566 IPR000772
domain Glycosyltransferase 2-like 139 - 311 IPR001173
domain N-acetylgalactosaminyltransferase 139 - 434 IPR045885

Functions

Description
EC Number 2.4.1.41 Hexosyltransferases
Subcellular Localization
  • Golgi apparatus, Golgi stack membrane ; Single-pass type II membrane protein
  • Secreted
  • Resides preferentially in the trans and medial parts of the Golgi stack
  • A secreted form also exists
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

9 GO annotations of cellular component

Name Definition
endoplasmic reticulum membrane The lipid bilayer surrounding the endoplasmic reticulum.
extracellular region The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
Golgi apparatus A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways.
Golgi cisterna membrane The lipid bilayer surrounding any of the thin, flattened compartments that form the central portion of the Golgi complex.
Golgi membrane The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
Golgi stack The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack.
integral component of Golgi membrane The component of the Golgi membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
perinuclear region of cytoplasm Cytoplasm situated near, or occurring around, the nucleus.

3 GO annotations of molecular function

Name Definition
carbohydrate binding Binding to a carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
manganese ion binding Binding to a manganese ion (Mn).
polypeptide N-acetylgalactosaminyltransferase activity Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. This reaction is the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis.

5 GO annotations of biological process

Name Definition
O-glycan processing The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form a core O-glycan structure.
protein maturation Any process leading to the attainment of the full functional capacity of a protein.
protein O-linked glycosylation A protein glycosylation process in which a carbohydrate or carbohydrate derivative unit is added to a protein via the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or via the phenol group of peptidyl-tyrosine, forming an O-glycan.
protein O-linked glycosylation via serine The glycosylation of protein via the O3 atom of peptidyl-serine, forming O3-glycosyl-L-serine; the most common forms are N-acetylgalactosaminyl, mannosyl, galactosyl, and xylosyl serine.
protein O-linked glycosylation via threonine The glycosylation of protein via the O3 atom of peptidyl-threonine, forming O3-glycosyl-L-threonine; the most common forms are N-acetylgalactosaminyl, mannosyl, and galactosyl threonine.

12 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
Q86SF2 GALNT7 N-acetylgalactosaminyltransferase 7 Homo sapiens (Human) PR
Q86SR1 GALNT10 Polypeptide N-acetylgalactosaminyltransferase 10 Homo sapiens (Human) PR
Q49A17 GALNTL6 Polypeptide N-acetylgalactosaminyltransferase-like 6 Homo sapiens (Human) PR
Q8IUC8 GALNT13 Polypeptide N-acetylgalactosaminyltransferase 13 Homo sapiens (Human) PR
Q96FL9 GALNT14 Polypeptide N-acetylgalactosaminyltransferase 14 Homo sapiens (Human) PR
Q8IXK2 GALNT12 Polypeptide N-acetylgalactosaminyltransferase 12 Homo sapiens (Human) PR
Q14435 GALNT3 Polypeptide N-acetylgalactosaminyltransferase 3 Homo sapiens (Human) PR
Q9NY28 GALNT8 Probable polypeptide N-acetylgalactosaminyltransferase 8 Homo sapiens (Human) PR
Q7Z7M9 GALNT5 Polypeptide N-acetylgalactosaminyltransferase 5 Homo sapiens (Human) PR
Q10472 GALNT1 Polypeptide N-acetylgalactosaminyltransferase 1 Homo sapiens (Human) PR
Q8BVG5 Galnt14 Polypeptide N-acetylgalactosaminyltransferase 14 Mus musculus (Mouse) PR
Q8I136 gly-4 Polypeptide N-acetylgalactosaminyltransferase 4 Caenorhabditis elegans PR
10 20 30 40 50 60
MRRRSRMLLC FAFLWVLGIA YYMYSGGGSA LAGGAGGGAG RKEDWNEIDP IKKKDLHHSN
70 80 90 100 110 120
GEEKAQSMET LPPGKVRWPD FNQEAYVGGT MVRSGQDPYA RNKFNQVESD KLRMDRAIPD
130 140 150 160 170 180
TRHDQCQRKQ WRVDLPATSV VITFHNEARS ALLRTVVSVL KKSPPHLIKE IILVDDYSND
190 200 210 220 230 240
PEDGALLGKI EKVRVLRNDR REGLMRSRVR GADAAQAKVL TFLDSHCECN EHWLEPLLER
250 260 270 280 290 300
VAEDRTRVVS PIIDVINMDN FQYVGASADL KGGFDWNLVF KWDYMTPEQR RSRQGNPVAP
310 320 330 340 350 360
IKTPMIAGGL FVMDKFYFEE LGKYDMMMDV WGGENLEISF RVWQCGGSLE IIPCSRVGHV
370 380 390 400 410 420
FRKQHPYTFP GGSGTVFARN TRRAAEVWMD EYKNFYYAAV PSARNVPYGN IQSRLELRKK
430 440 450 460 470 480
LSCKPFKWYL ENVYPELRVP DHQDIAFGAL QQGTNCLDTL GHFADGVVGV YECHNAGGNQ
490 500 510 520 530 540
EWALTKEKSV KHMDLCLTVV DRAPGSLIKL QGCRENDSRQ KWEQIEGNSK LRHVGSNLCL
550 560 570
DSRTAKSGGL SVEVCGPALS QQWKFTLNLQ Q