Q0P5L0

PR
Gene name
RBM42
Protein name
RNA-binding protein 42
Names
RNA-binding motif protein 42
Species
Bos taurus (Bovine)
KEGG Pathway
bta:540172
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

250-368 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q0P5L0

Entry ID Method Resolution Chain Position Source
AF-Q0P5L0-F1 Predicted AlphaFoldDB

No variants for Q0P5L0

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q0P5L0

No associated diseases with Q0P5L0

4 regional properties for Q0P5L0

Type Name Position InterPro Accession
conserved_site Uncharacterised protein family UPF0758, conserved site 180 - 185 IPR020891
domain RadC-like JAB domain 110 - 229 IPR025657
domain MPN domain 109 - 231 IPR037518
domain UPF0758, N-terminal 11 - 87 IPR046778

Functions

Description
EC Number
Subcellular Localization
  • Nucleus
  • Cytoplasm
  • Upon stress response, localizes with HNRNPK in cytoplasmic aggregates of stalled translational preinitiation complexes called stress granules
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

3 GO annotations of cellular component

Name Definition
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
ribonucleoprotein complex A macromolecular complex that contains both RNA and protein molecules.

1 GO annotations of molecular function

Name Definition
RNA binding Binding to an RNA molecule or a portion thereof.

No GO annotations of biological process

Name Definition
No GO annotations for biological process

1 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
Q91V81 Rbm42 RNA-binding protein 42 Mus musculus (Mouse) PR
10 20 30 40 50 60
MAGAGPAPGL PGAGGPVVPG PGAGIPGKSG EERLKEMEAE MALFEQEVLG APVTGIPTAV
70 80 90 100 110 120
PAVPTVPTVE AMQVPAAPVI RPIIATNTYQ QVQQTLEARA AAAATVVPPM VGGPPFVGPV
130 140 150 160 170 180
GFGPGDRSHL DSPEAREAMF LRRAAAGPRP MALRPPHQAL VGPPLPGPPG PPMMLPPMAR
190 200 210 220 230 240
APGPPLGSMA ALRPPLEEPA TPRELGLGLG LGLKEKEEAV VAAAAGLEEA SAVVAVGAGG
250 260 270 280 290 300
APAGPAVIGP SLPLALAMPL PEPEPLPLPL EVVRGLLPPL RIPELLSLRP RPRPPRPEPP
310 320 330 340 350 360
PGLMALEVPE PLSEDKKKGK PEKLKRCIRT AAGSSWEDPS LLEWDADDFR IFCGDLGNEV
370 380 390 400 410 420
NDDILARAFS RFPSFLKAKV IRDKRTGKTK GYGFVSFKDP SDYVRAMREM NGKYVGSRPI
430 440
KLRKSMWKDR NLDVVRKKQK EKKKLGLR