P93528

PR
Gene name
PHYC
Protein name
Phytochrome C
Names
Species
Sorghum bicolor (Sorghum) (Sorghum vulgare)
KEGG Pathway
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

1-86 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for P93528

Entry ID Method Resolution Chain Position Source
AF-P93528-F1 Predicted AlphaFoldDB

No variants for P93528

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for P93528

No associated diseases with P93528

12 regional properties for P93528

Type Name Position InterPro Accession
domain PAS domain 618 - 741 IPR000014-1
domain PAS domain 748 - 873 IPR000014-2
domain GAF domain 216 - 409 IPR003018
domain Histidine kinase/HSP90-like ATPase 1007 - 1122 IPR003594
domain Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 896 - 959 IPR003661
domain Histidine kinase domain 902 - 1122 IPR005467
domain Phytochrome, central region 412 - 587 IPR013515
domain PAS fold-2 68 - 183 IPR013654
domain PAS fold 621 - 734 IPR013767-1
domain PAS fold 751 - 873 IPR013767-2
domain Phytochrome chromophore attachment domain 216 - 389 IPR016132
domain Phytochrome A/B/C/D/E-like, histidine-kinase-related domain 1006 - 1118 IPR044767

Functions

Description
EC Number
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

No GO annotations of cellular component

Name Definition
No GO annotations for cellular component

3 GO annotations of molecular function

Name Definition
phosphorelay sensor kinase activity Catalysis of the phosphorylation of a histidine residue in response to detection of an extracellular signal such as a chemical ligand or change in environment, to initiate a change in cell state or activity. The two-component sensor is a histidine kinase that autophosphorylates a histidine residue in its active site. The phosphate is then transferred to an aspartate residue in a downstream response regulator, to trigger a response.
photoreceptor activity The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation.
protein homodimerization activity Binding to an identical protein to form a homodimer.

4 GO annotations of biological process

Name Definition
detection of visible light The series of events in which a visible light stimulus is received by a cell and converted into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm.
protein-tetrapyrrole linkage The covalent linking of a tetrapyrrole to a protein.
red, far-red light phototransduction The sequence of reactions within a cell required to convert absorbed photons from red or far-red light into a molecular signal; the red, far-red light range is defined as having a wavelength within the range 660-730 nm.
regulation of DNA-templated transcription Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.

1 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
P14714 PHYC Phytochrome C Arabidopsis thaliana (Mouse-ear cress) PR
10 20 30 40 50 60
MSSPLNNRGT CSRSSSARSR HSARVVAQTP VDAQLHAEFE SSQRNFDYSS SVSAAIRPSV
70 80 90 100 110 120
STSTVSTYHQ TMQRGLYIQP FGCLLAVHPD TFTLLAYSEN APEMLDLTPH AVPTIDQRDA
130 140 150 160 170 180
LAVGADVRTL FRSQSSVALH KAATFGEVNL LNPILVHART SGKPFYAILH RIDVGLVIDL
190 200 210 220 230 240
EPVNPVDVPV TAAGALKSYK LAAKAISRLQ SLPSGNLSLL CDVLVREVSE LTGYDRVMAY
250 260 270 280 290 300
KFHEDEHGEV ISECRRSDLE PYLGLHYPAT DIPQASRFLF MKNKVRMICD CSATLVKIIQ
310 320 330 340 350 360
DDSLAQPLSL CGSTLRASHG CHAQYMANMG SVASLVMSVT ISNDEEEDVD TGSDQQPKGR
370 380 390 400 410 420
KLWGLVVCHH TSPRFVPFPL RYACEFLLQV FGIQLNKEVE LAAQAKERHI LRTQTLLWDM
430 440 450 460 470 480
LLRDAPVGIF TQSPNVMDLV KCDGVALYYQ NQLLLLGSTP SESEIKSIAT WLQENHDGST
490 500 510 520 530 540
GLSTDSLVEA GYPGAAALRE VVCGMAAIKI SSKDFIFWFR SHTTKEIKWG GAKHEPVDAD
550 560 570 580 590 600
DNGRKMHPRS SFKAFLEVVK WRSVPWEDVE MDAIHSLQLI LRGSLQDEDA NRNNVRSIVK
610 620 630 640 650 660
APPDDTKKIQ GLLELRTVTN EMVRLIETAT APVLAVDIAG NINGWNNKAA ELTGLPVMEA
670 680 690 700 710 720
IGRPLIDLVV VDSIEVVKRI LDSALQGIEE QNLEIKLKAF HEQECNGPII LMVNSCCSRD
730 740 750 760 770 780
LSEKVIGVCF VGQDLTTQKM IMDKYTRIQG DYVAIVKNPS ELIPPIFMIN DLGSCLEWNK
790 800 810 820 830 840
AMQKITGIQR EDVIDKLLIG EVFTLHDYGC RVKDHATLTK LSILMNAVIS GQDPEKLLFG
850 860 870 880 890 900
FFDTDGKYIE SLLTVNKRIN AEGKITGAIC FLHVASPELQ HALQVQKMSE QAATNSFKEL
910 920 930 940 950 960
TYIHQELRNP LNGMQFTCNL LEPSELTEEQ RKLLSSNILC QDQLKKILHD TDLESIEQCY
970 980 990 1000 1010 1020
MEMNTVEFNL EEALNTVLMQ GIPLGKEKRI SIERDWPVEI SRMYLYGDNL RLQQVLADYL
1030 1040 1050 1060 1070 1080
ACALQFTQPA EGPIVLQVIP KKENIGSGMQ IAHLEFRIVH PAPGVPEALI QEMFRHNPEV
1090 1100 1110 1120 1130
SREGLGLYIC QKLVKTMSGT VQYLREADTS SFIILIEFPV AQLSSKRSKP STSKF