P71298
Gene name |
intF (yagO, b0281, JW0275) |
Protein name |
Prophage integrase IntF |
Names |
Putative prophage CP4-6 integrase |
Species |
Escherichia coli (strain K12) |
KEGG Pathway |
eco:b0281 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for P71298
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-P71298-F1 | Predicted | AlphaFoldDB |
No variants for P71298
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for P71298 | |||||
No associated diseases with P71298
No GO annotations of cellular component
| Name | Definition |
|---|---|
| No GO annotations for cellular component |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
6 GO annotations of biological process
| Name | Definition |
|---|---|
| DNA integration | The process in which a DNA segment is incorporated into another, usually larger, DNA molecule such as a chromosome. |
| DNA recombination | Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Interchromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction. |
| establishment of integrated proviral latency | A process by which the virus integrates into the host genome and establishes as a stable provirus or prophage. |
| response to X-ray | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz). |
| viral entry into host cell | The process that occurs after viral attachment by which a virus, or viral nucleic acid, breaches the plasma membrane or cell envelope and enters the host cell. The process ends when the viral nucleic acid is released into the host cell cytoplasm. |
| viral genome integration into host DNA | The insertion into a host genome of viral DNA, usually by the action of an integrase enzyme. Once integrated, the provirus persists in the host cell and serves as a template for the transcription of viral genes and replication of the viral genome, leading to the production of new viruses. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MFIPSIYLHQ | QLHYCKTAIL | NWSRKMALSR | QKFTFERLRR | FTLPEGKKQT | FLWDADVTTL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| ACRATSGAKA | FVFQSVYAGK | TLRMTIGNIN | DWKIDDARAE | ARRLQTLIDT | GIDPRIAKAV |
| 130 | 140 | 150 | 160 | 170 | 180 |
| KIAEAESLQA | ESRKTKVTFS | VAWEDYLQEL | RTGISAKTKR | PYSTRYIADH | INLSSRGGES |
| 190 | 200 | 210 | 220 | 230 | 240 |
| KKRGQGPTSA | GPLASLLNLP | LSELTPDYIA | AWLSTERQNR | PTVTAHAYRL | LRAFIKWSNY |
| 250 | 260 | 270 | 280 | 290 | 300 |
| QKKYQGIIPG | DLAQDYNVRK | MVPVSASKAD | DCLQKEQLKS | WFSAVRSLNN | PIASAYLQVL |
| 310 | 320 | 330 | 340 | 350 | 360 |
| LLTGARREEI | ASLRWSDVDF | KWSSMRIKDK | IEGERIIPLT | PYVSELLNVL | AQSPNSDVNK |
| 370 | 380 | 390 | 400 | 410 | 420 |
| EGWVFRSNSK | SGKIIEPRSA | HNRALVLAEL | PHISLHGLRR | SFGTLAEWVE | VPTGIVAQIM |
| 430 | 440 | 450 | 460 | ||
| GHKPSALAEK | HYRRRPLDLL | RKWHEKIETW | ILNEAGITIK | NNVDMR |