P55884
Gene name |
EIF3B |
Protein name |
Eukaryotic translation initiation factor 3 subunit B |
Names |
eIF3b, Eukaryotic translation initiation factor 3 subunit 9, Prt1 homolog, hPrt1, eIF-3-eta, eIF3 p110, eIF3 p116 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:8662 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
13 structures for P55884
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 2KRB | NMR | - | A | 184-264 | PDB |
| 2NLW | NMR | - | A | 170-274 | PDB |
| 5K1H | EM | 490 A | B | 170-745 | PDB |
| 6YBT | EM | 600 A | 1 | 1-814 | PDB |
| 6ZMW | EM | 370 A | 1 | 1-814 | PDB |
| 6ZON | EM | 300 A | B | 1-814 | PDB |
| 6ZP4 | EM | 290 A | B | 1-814 | PDB |
| 6ZVJ | EM | 380 A | B | 180-745 | PDB |
| 7A09 | EM | 350 A | B | 1-814 | PDB |
| 7QP6 | EM | 470 A | 1 | 1-813 | PDB |
| 7QP7 | EM | 370 A | 1 | 1-813 | PDB |
| 8OZ0 | EM | 350 A | I | 1-814 | PDB |
| AF-P55884-F1 | Predicted | AlphaFoldDB |
683 variants for P55884
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA366615158 rs1252801571 |
2 | Q>* | No |
ClinGen gnomAD |
|
|
CA366615160 rs1252801571 |
2 | Q>K | No |
ClinGen gnomAD |
|
|
CA366615162 rs1480264668 |
2 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
CA366615164 rs1480264668 |
2 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA366615171 rs1189817073 |
3 | D>N | No |
ClinGen gnomAD |
|
|
CA366615185 rs1459066307 |
4 | A>T | No |
ClinGen TOPMed |
|
|
rs757942602 CA4125140 |
4 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA366615205 rs1416306695 |
6 | N>H | No |
ClinGen TOPMed |
|
|
rs1407555666 CA366615211 |
6 | N>S | No |
ClinGen Ensembl |
|
|
rs566446708 CA152637330 |
7 | V>M | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs536170252 CA152637340 |
8 | A>E | No |
ClinGen 1000Genomes |
|
|
rs536170252 CA366615233 |
8 | A>V | No |
ClinGen 1000Genomes |
|
|
CA366615236 rs1184871623 |
9 | V>L | No |
ClinGen TOPMed |
|
| TCGA novel | 9 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA366615252 rs1427265896 |
10 | P>L | No |
ClinGen gnomAD |
|
|
CA152637354 rs11551169 |
11 | E>* | No |
ClinGen TOPMed |
|
|
rs11551169 CA366615256 |
11 | E>Q | No |
ClinGen TOPMed |
|
|
CA366615271 rs1266303015 |
12 | A>V | No |
ClinGen TOPMed |
|
|
rs1220528671 CA366615273 |
13 | A>T | No |
ClinGen TOPMed |
|
|
rs1309389028 CA366615282 |
14 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1309389028 CA366615280 |
14 | E>Q | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 15 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1359836177 CA366615295 |
15 | E>G | No |
ClinGen gnomAD |
|
| TCGA novel | 15 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1292755358 CA366615312 |
17 | A>D | No |
ClinGen TOPMed |
|
|
CA366615309 rs940228309 |
17 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
CA152637363 rs940228309 |
17 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA366615323 rs1369490620 |
18 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA366615317 rs1272815595 |
18 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1219677877 CA366615337 |
20 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1219677877 CA366615334 |
20 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA366615380 rs1461240256 |
23 | Q>E | No |
ClinGen TOPMed |
|
|
rs1392826926 CA366615386 |
23 | Q>L | No |
ClinGen TOPMed |
|
|
CA366615400 rs1173282162 |
24 | P>A | No |
ClinGen TOPMed |
|
|
CA152637381 rs898602556 |
25 | A>P | No |
ClinGen TOPMed |
|
|
rs898602556 CA152637375 |
25 | A>T | No |
ClinGen TOPMed |
|
|
CA366615424 rs1435029577 |
25 | A>V | No |
ClinGen TOPMed |
|
|
CA152637392 rs1028394118 |
29 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1190897098 CA366615522 |
30 | P>S | No |
ClinGen TOPMed |
|
|
CA366615553 rs1207362896 |
31 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA366615560 rs1207362896 |
31 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs889806096 CA152637396 |
33 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1239400546 CA366615599 |
33 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1239400546 CA366615602 |
33 | G>W | No |
ClinGen TOPMed gnomAD |
|
|
CA366615662 rs1275502302 |
36 | R>W | No |
ClinGen gnomAD |
|
|
rs1312328023 CA366615700 |
37 | P>L | No |
ClinGen TOPMed |
|
|
rs1312328023 CA366615696 |
37 | P>R | No |
ClinGen TOPMed |
|
|
CA366615721 rs1219687810 |
38 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
CA152637408 rs955950785 |
40 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs955950785 CA366615746 |
40 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs988647479 CA152637412 |
41 | G>D | No |
ClinGen TOPMed |
|
|
rs1297021840 CA366615780 |
41 | G>S | No |
ClinGen TOPMed |
|
|
CA366615802 rs1562470715 |
43 | P>L | No |
ClinGen Ensembl |
|
|
CA366615826 rs1378207008 |
45 | A>S | No |
ClinGen TOPMed |
|
|
rs1021447265 CA152637415 |
46 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs979877795 CA152637422 |
47 | G>V | No |
ClinGen TOPMed |
|
|
CA152637426 rs927045802 |
48 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA366615894 rs1173107097 |
50 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA152637436 rs960015417 |
53 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1452043828 CA366615965 |
54 | E>K | No |
ClinGen gnomAD |
|
|
rs1337514613 CA366615977 |
54 | E>V | No |
ClinGen gnomAD |
|
|
rs1478570475 CA366615988 |
55 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA366615986 rs1478570475 |
55 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1451942132 CA366616012 |
56 | G>V | No |
ClinGen gnomAD |
|
|
rs1388852172 CA366616007 |
56 | G>W | No |
ClinGen gnomAD |
|
|
CA366616021 rs1370667464 |
57 | I>F | No |
ClinGen gnomAD |
|
|
CA366616027 rs1355357340 |
57 | I>T | No |
ClinGen TOPMed |
|
|
CA366616040 rs1351335362 |
58 | A>E | No |
ClinGen gnomAD |
|
|
CA366616037 rs1321190910 |
58 | A>S | No |
ClinGen gnomAD |
|
|
rs1351335362 CA366616042 |
58 | A>V | No |
ClinGen gnomAD |
|
|
CA366616061 rs918165084 |
59 | E>A | No |
ClinGen TOPMed gnomAD |
|
|
CA152637454 rs918165084 |
59 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1230567264 CA366616078 |
60 | A>D | No |
ClinGen gnomAD |
|
|
CA366616070 rs1362913914 |
60 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1230567264 CA366616080 |
60 | A>V | No |
ClinGen gnomAD |
|
|
CA366616102 rs1226769269 |
61 | G>E | No |
ClinGen gnomAD |
|
|
CA366616095 rs1355762829 CA366616092 |
61 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA366616097 rs1355762829 |
61 | G>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1208481747 CA366616122 |
62 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1452475940 CA366616121 |
62 | P>S | No |
ClinGen gnomAD |
|
|
CA366616142 rs1466615563 |
63 | E>* | No |
ClinGen gnomAD |
|
|
rs1562471015 CA572357431 |
64 | S>* | No |
ClinGen Ensembl |
|
|
CA366616163 rs9690787 |
64 | S>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs9690787 CA4125145 VAR_047972 |
64 | S>P | No |
ClinGen UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
CA366616185 rs1472180720 |
65 | E>* | No |
ClinGen gnomAD |
|
|
rs1415487965 CA366616201 |
65 | E>D | No |
ClinGen gnomAD |
|
|
CA366616189 rs1161018349 |
65 | E>G | No |
ClinGen gnomAD |
|
|
rs1319605276 CA366616215 |
66 | V>A | No |
ClinGen gnomAD |
|
|
rs1405641241 CA366616206 |
66 | V>M | No |
ClinGen gnomAD |
|
|
rs1386227493 CA366616223 |
67 | R>G | No |
ClinGen gnomAD |
|
|
rs1437133073 CA366616235 |
67 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
CA366616239 rs1321159894 |
67 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
CA366616236 rs1437133073 |
67 | R>T | No |
ClinGen TOPMed gnomAD |
|
|
CA366616244 rs1339883612 |
68 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1445908087 CA366616253 |
68 | T>I | No |
ClinGen gnomAD |
|
|
CA366616247 rs1339883612 |
68 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1214737662 CA366616280 |
69 | E>D | No |
ClinGen gnomAD |
|
|
rs1256756779 CA366616270 |
69 | E>G | No |
ClinGen TOPMed |
|
|
CA366616255 rs1357294414 |
69 | E>K | No |
ClinGen gnomAD |
|
|
CA152637469 rs1037174818 |
70 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1037174818 CA366616286 |
70 | P>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA366616285 rs1228059961 |
70 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs770231857 CA4125146 |
71 | A>E | No |
ClinGen ExAC TOPMed |
|
|
rs770231857 CA366616305 |
71 | A>V | No |
ClinGen ExAC TOPMed |
|
|
CA366616313 rs1209832539 |
72 | A>T | No |
ClinGen gnomAD |
|
|
CA152637480 rs920122356 |
74 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA152637483 rs931461785 |
76 | A>V | No |
ClinGen TOPMed |
|
|
CA366616412 rs1441246794 |
77 | A>T | No |
ClinGen gnomAD |
|
|
rs1184747289 CA366616425 |
77 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs775676864 CA4125147 |
79 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs569483143 CA4125148 |
80 | P>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1475306399 CA366616517 |
80 | P>S | No |
ClinGen gnomAD |
|
|
CA366616546 rs1298891834 |
81 | S>F | No |
ClinGen TOPMed |
|
|
CA366616570 rs1400285467 |
82 | E>Q | No |
ClinGen TOPMed |
|
|
rs1458624463 CA366616602 |
83 | S>L | No |
ClinGen gnomAD |
|
|
rs1159720317 CA366616608 |
84 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1159720317 CA366616612 |
84 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1458258075 CA366616643 |
86 | P>A | No |
ClinGen TOPMed |
|
|
rs1417049142 CA366616665 |
86 | P>L | No |
ClinGen TOPMed |
|
|
rs1394270605 CA366616670 |
87 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA366616676 rs1478764674 |
87 | P>L | No |
ClinGen TOPMed |
|
|
rs889868304 CA152637525 |
88 | A>V | No |
ClinGen TOPMed |
|
|
rs1336214842 CA366616726 |
89 | A>V | No |
ClinGen gnomAD |
|
|
rs774710517 CA366616778 |
92 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4125151 rs762042914 |
93 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA366616793 rs1409376267 |
93 | P>S | No |
ClinGen gnomAD |
|
|
CA366616806 rs1229381301 |
94 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
CA152637529 rs1008651554 |
94 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA366616821 rs1255817688 |
95 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA4125152 rs767685006 |
96 | H>P | No |
ClinGen ExAC |
|
|
rs1280070664 CA366616835 |
97 | A>T | No |
ClinGen gnomAD |
|
|
rs538046913 CA4125153 |
97 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA366616862 rs1324879697 |
98 | E>A | No |
ClinGen TOPMed |
|
|
rs1039052542 CA152637550 |
98 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs759355139 CA4125154 |
99 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1021029394 CA152637564 |
100 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1010977724 CA366616902 |
100 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1010977724 CA152637558 |
100 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs11551168 CA152637576 |
102 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs758078180 CA4125157 |
103 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA366616949 rs1474166705 |
104 | Q>* | No |
ClinGen TOPMed |
|
|
rs968564670 CA152637597 |
104 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
CA152637605 rs1001373531 |
105 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1199216067 CA366616965 |
105 | G>S | No |
ClinGen TOPMed |
|
|
rs1372615513 CA366616980 |
106 | E>K | No |
ClinGen gnomAD |
|
|
CA366616994 rs1410708646 |
106 | E>V | No |
ClinGen gnomAD |
|
|
CA366617004 rs1300965664 |
107 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1300965664 CA366617001 |
107 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA152637611 rs1034549113 |
107 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA152637617 rs966514301 |
108 | P>L | No |
ClinGen TOPMed |
|
|
rs966514301 CA366617025 |
108 | P>R | No |
ClinGen TOPMed |
|
|
rs1235999032 CA366617016 |
108 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs777353009 CA152637645 |
109 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs777353009 CA4125158 |
109 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs1275969474 CA366617031 |
109 | G>R | No |
ClinGen gnomAD |
|
|
CA366617061 rs1271922015 |
111 | Q>E | No |
ClinGen gnomAD |
|
|
CA366617080 rs1483814971 |
112 | A>P | No |
ClinGen gnomAD |
|
|
CA366617082 rs1562471466 |
112 | A>V | No |
ClinGen Ensembl |
|
|
rs1034867264 CA152637647 |
113 | R>L | No |
ClinGen gnomAD |
|
|
CA366617093 rs1034867264 |
113 | R>P | No |
ClinGen gnomAD |
|
|
CA366617087 rs1196049735 |
113 | R>W | No |
ClinGen gnomAD |
|
|
CA366617113 rs959783942 |
114 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA366617100 rs751195596 |
114 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4125160 rs756807280 |
114 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA4125159 rs751195596 |
114 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1372518888 CA366617130 |
115 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA152637655 rs907505881 |
115 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
rs992921216 CA152637653 |
115 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs959333317 CA152637658 |
116 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
CA366617144 rs1400912902 |
116 | R>L | No |
ClinGen TOPMed |
|
|
CA366617154 rs1426584440 |
117 | S>F | No |
ClinGen TOPMed |
|
|
CA4125161 rs780646611 |
117 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA366617161 rs1343197759 |
118 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA366617163 rs1343197759 |
118 | D>Y | No |
ClinGen gnomAD |
|
|
rs931512806 CA152637716 |
119 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
rs369063429 CA366617193 |
120 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1263217631 CA366617197 |
120 | R>P | No |
ClinGen gnomAD |
|
|
rs369063429 CA4125164 |
120 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA366617213 rs1343711655 |
122 | Q>K | No |
ClinGen gnomAD |
|
|
rs944114487 CA366617238 |
124 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA152637734 rs944114487 |
124 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs918339689 CA152637739 |
126 | E>A | No |
ClinGen Ensembl |
|
|
rs185762794 CA4125166 |
126 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4125167 rs774763606 |
127 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1448113625 CA366617292 |
128 | A>S | No |
ClinGen gnomAD |
|
|
rs1392036902 CA366617314 |
130 | G>R | No |
ClinGen gnomAD |
|
|
rs1242028538 CA366617331 |
131 | N>S | No |
ClinGen TOPMed |
|
|
CA366617351 rs540304240 |
132 | E>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs773379562 CA366617339 |
132 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773379562 CA4125170 |
132 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA366617345 rs1459685125 |
132 | E>V | No |
ClinGen TOPMed gnomAD |
|
|
rs765021612 CA4125172 |
133 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA4125175 rs763850627 |
135 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs543979818 CA152637790 |
136 | A>D | No |
ClinGen gnomAD |
|
|
rs543979818 CA366617422 |
136 | A>V | No |
ClinGen gnomAD |
|
|
rs756860535 CA4125177 |
137 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA366617430 rs1319514497 |
137 | E>K | No |
ClinGen gnomAD |
|
|
CA366617464 rs1273526168 |
138 | A>G | No |
ClinGen gnomAD |
|
|
rs767034532 CA4125178 |
139 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4125179 rs749876972 |
139 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA366617468 rs1328238724 |
139 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1181331144 CA366617493 |
140 | P>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1181331144 CA366617495 |
140 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
CA4125180 rs376446348 |
140 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1014033972 CA152637812 |
141 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs369761279 CA4125182 |
141 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA152637817 rs867728535 |
142 | A>E | No |
ClinGen gnomAD |
|
| TCGA novel | 142 | A>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1346281291 CA366617539 |
143 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA366617526 rs779383658 |
143 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA152637823 rs1014608839 |
144 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA4125185 rs748406524 |
144 | E>V | No |
ClinGen ExAC |
|
|
CA366617554 rs1301709305 |
145 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
CA366617566 rs1416180452 |
146 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1293531713 CA366617573 |
146 | G>D | No |
ClinGen gnomAD |
|
|
CA366617570 rs1416180452 |
146 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA366617593 rs1226332885 |
147 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
CA4125188 rs747128731 |
148 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA366617622 rs1269840349 |
148 | A>S | No |
ClinGen gnomAD |
|
|
CA366617624 rs747128731 |
148 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775335656 CA366617643 |
149 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA366617653 rs1188843816 |
149 | D>E | No |
ClinGen gnomAD |
|
|
rs775335656 CA4125190 |
149 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA366617632 rs1254280986 |
149 | D>N | No |
ClinGen gnomAD |
|
|
rs1251340528 CA366617654 |
150 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1251340528 CA366617657 |
150 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA4125191 rs545964398 |
151 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA152637873 rs191463396 |
151 | P>S | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 152 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA366617707 rs1189348544 |
152 | S>F | No |
ClinGen TOPMed |
|
|
rs1433063533 CA366617700 |
152 | S>T | No |
ClinGen gnomAD |
|
|
rs1436035971 CA366617758 |
153 | F>C | No |
ClinGen gnomAD |
|
|
rs1034836301 CA366617769 |
153 | F>L | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 154 | S>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA152637921 rs1012154804 |
156 | P>R | No |
ClinGen Ensembl |
|
|
CA4125194 rs761466793 |
156 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs369059870 CA4125195 |
157 | E>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA152637936 rs944193199 |
158 | D>G | No |
ClinGen TOPMed |
|
|
CA152637932 rs767015309 |
158 | D>N | No |
ClinGen TOPMed |
|
|
CA152637949 rs972399078 |
161 | D>E | No |
ClinGen TOPMed |
|
|
CA366617989 rs1211655858 |
162 | D>E | No |
ClinGen gnomAD |
|
|
rs1219438889 CA366617975 |
162 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA366617972 rs1350032706 |
162 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA366617974 rs1350032706 |
162 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs78680793 CA4125198 CA366618011 |
163 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs755494844 CA4125200 |
165 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1233751415 CA366618060 |
165 | E>K | No |
ClinGen gnomAD |
|
|
CA366618116 CA4125201 rs779435965 |
166 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1583152719 CA366606234 |
169 | L>R | No |
ClinGen Ensembl |
|
|
rs745892776 CA4125228 |
169 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA4125229 rs769858912 |
170 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs894520031 CA152590796 |
171 | D>N | No |
ClinGen TOPMed |
|
|
CA152590800 rs1007949456 |
173 | L>V | No |
ClinGen TOPMed |
|
|
CA4125232 rs201331895 |
176 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4125231 COSM1698323 rs748047621 |
176 | R>W | skin [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA4125233 rs773012336 |
178 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1179766787 CA366606314 |
181 | D>N | No |
ClinGen gnomAD |
|
|
rs58174334 CA366606369 |
183 | I>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs769911546 CA152590811 |
183 | I>N | No |
ClinGen Ensembl |
|
|
CA4125235 rs770552909 |
184 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs776147143 CA4125236 |
185 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201155310 CA4125239 |
186 | V>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1339968722 CA366606428 |
188 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA152590823 rs746875139 |
190 | D>G | No |
ClinGen Ensembl |
|
|
rs143426217 CA4125241 |
191 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs147152815 CA4125246 |
194 | Q>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA366606510 rs1315791605 |
194 | Q>R | No |
ClinGen TOPMed |
|
|
CA152590897 rs764191350 |
196 | G>A | No |
ClinGen gnomAD |
|
|
rs764191350 CA152590871 |
196 | G>E | No |
ClinGen gnomAD |
|
|
rs748107158 CA4125248 |
197 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs771989737 CA4125249 |
197 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA4125251 rs746890634 |
198 | D>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 199 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA152590936 rs563978553 |
204 | K>E | No |
ClinGen Ensembl |
|
|
CA366606749 rs1361883951 |
207 | I>F | No |
ClinGen TOPMed gnomAD |
|
|
CA366606748 rs1361883951 |
207 | I>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 209 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA366606806 rs1401507943 |
214 | F>L | No |
ClinGen gnomAD |
|
|
rs776398952 CA4125253 |
216 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs745482471 CA4125254 |
218 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs769457046 CA4125255 |
219 | N>D | No |
ClinGen ExAC |
|
| TCGA novel | 221 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA366606856 rs1376270687 |
222 | Y>H | No |
ClinGen gnomAD |
|
|
CA366606871 rs1583153185 |
224 | E>A | No |
ClinGen Ensembl |
|
|
rs775088394 CA4125256 |
224 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs763565370 CA4125257 |
225 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA152590973 rs922864560 |
226 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1240300336 CA366606903 |
228 | K>N | No |
ClinGen gnomAD |
|
|
CA366606900 rs1363256975 |
228 | K>R | No |
ClinGen TOPMed |
|
|
rs934285697 CA152590991 |
230 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA366606921 rs1343563914 |
231 | G>A | No |
ClinGen gnomAD |
|
|
CA4125295 rs778237987 |
232 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA152592911 rs778237987 |
232 | Y>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748701494 CA4125296 |
236 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs535162743 CA152592923 |
238 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs561298082 CA152592922 |
238 | A>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs561298082 CA4125299 |
238 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs535162743 CA4125300 |
238 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759633167 CA4125302 |
240 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA366607225 rs759633167 |
240 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1388523311 CA366607238 |
242 | H>Y | No |
ClinGen gnomAD |
|
|
CA366607245 rs752665303 |
243 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4125304 rs752665303 |
243 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA4125305 rs150739455 |
243 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200218143 CA4125307 |
245 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1353237676 CA366607263 |
246 | A>S | No |
ClinGen gnomAD |
|
|
rs779965692 CA4125309 |
246 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA366607268 rs1482849508 |
247 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1482849508 CA366607266 |
247 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA152592966 rs369741313 |
248 | K>N | No |
ClinGen ESP |
|
|
CA4125311 rs754528550 |
249 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs570068196 CA4125312 |
250 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
| TCGA novel | 251 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1281945249 CA366607292 |
251 | D>Y | No |
ClinGen TOPMed |
|
|
CA4125315 rs200489277 |
252 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA366607308 rs1476339335 COSM1736428 |
253 | Y>C | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1426569353 CA366607316 |
254 | K>R | No |
ClinGen gnomAD |
|
|
CA366607359 rs1411733663 |
260 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA4125320 rs769844132 |
262 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs373392664 CA4125319 |
262 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1029905119 CA152592997 |
263 | V>L | No |
ClinGen Ensembl |
|
|
rs775778858 CA4125321 |
264 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs763185237 CA4125322 COSM1088663 |
265 | L>I | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs763185237 CA366607387 |
265 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs764248115 CA4125323 |
266 | F>C | No |
ClinGen ExAC gnomAD |
|
|
CA4125325 rs551734577 |
267 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs551734577 CA4125324 |
267 | T>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs912105440 CA152593053 COSM1088664 |
269 | F>C | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs879262626 CA152593063 |
270 | D>H | No |
ClinGen gnomAD |
|
|
CA366607561 rs1583157717 |
272 | Y>H | No |
ClinGen Ensembl |
|
|
CA4125355 rs746365191 |
273 | M>L | No |
ClinGen ExAC gnomAD |
|
|
CA366607574 rs746365191 |
273 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs150027587 CA4125356 |
274 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs151282164 CA4125359 |
276 | S>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1249808149 CA366607625 |
276 | S>R | No |
ClinGen TOPMed |
|
|
rs151282164 CA4125360 |
276 | S>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4125363 rs148785184 |
278 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4125362 rs148785184 |
278 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1312509335 CA366607679 |
280 | D>G | No |
ClinGen TOPMed |
|
|
rs1269712171 CA366607675 |
280 | D>Y | No |
ClinGen gnomAD |
|
|
rs759475355 CA4125364 |
281 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA366607695 rs1360081985 |
281 | I>T | No |
ClinGen gnomAD |
|
|
rs764959863 CA4125365 |
283 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA366607708 rs1274083064 |
283 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA152593548 rs559451964 |
288 | K>E | No |
ClinGen 1000Genomes |
|
|
CA4125366 rs775203648 |
288 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749195609 CA4125403 |
292 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA4125404 rs768472131 |
294 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1231082738 CA366608008 |
294 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA152594176 rs768472131 |
294 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4125405 rs77981709 |
298 | E>* | No |
ClinGen ExAC gnomAD |
|
|
CA4125406 rs761386350 |
298 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA152594208 rs11551165 |
300 | A>S | No |
ClinGen Ensembl |
|
|
rs1406553022 CA366608158 |
301 | E>A | No |
ClinGen TOPMed |
|
|
rs771689313 CA4125407 |
302 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA366608249 rs1182527003 |
307 | S>G | No |
ClinGen TOPMed |
|
|
CA152594215 rs201467063 |
307 | S>T | No |
ClinGen Ensembl |
|
|
CA366608308 rs1583158947 |
311 | E>D | No |
ClinGen Ensembl |
|
|
rs1175767282 CA366608312 |
312 | S>G | No |
ClinGen gnomAD |
|
|
CA366608319 rs1583158960 |
312 | S>R | No |
ClinGen Ensembl |
|
|
COSM3698340 CA4125408 rs772725989 |
315 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
COSM1329894 CA4125409 rs371362324 |
315 | R>H | Variant assessed as Somatic; 4.623e-05 impact. ovary [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs765953961 CA4125410 |
318 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs1017284863 CA152594224 |
318 | I>V | No |
ClinGen Ensembl |
|
|
rs754426557 CA4125411 |
319 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA152594226 rs866908503 |
319 | F>S | No |
ClinGen Ensembl |
|
|
CA152594232 rs945733263 |
322 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs146798724 CA4125412 |
323 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA366608444 rs146798724 |
323 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4125413 rs140490524 |
325 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA366608469 rs1282005010 |
325 | D>G | No |
ClinGen gnomAD |
|
|
CA152594263 rs267601465 |
326 | P>S | No |
ClinGen Ensembl |
|
|
rs1194983263 CA366608488 |
327 | V>I | No |
ClinGen gnomAD |
|
|
rs374813967 CA4125416 |
328 | S>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1252383152 CA366608516 |
329 | I>T | No |
ClinGen gnomAD |
|
|
rs751711988 CA4125417 |
329 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4125418 rs757370973 |
333 | A>E | No |
ClinGen ExAC gnomAD |
|
|
CA152594272 rs757370973 |
333 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA152595124 rs375551545 |
338 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA TOPMed gnomAD |
|
rs374521648 CA152595135 |
340 | V>L | No |
ClinGen Ensembl |
|
|
CA152595138 rs368514580 |
341 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
CA4125446 rs368514580 |
341 | R>G | No |
ClinGen ESP ExAC gnomAD |
|
|
CA366609856 rs1296455398 |
341 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA4125447 rs770639032 |
343 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1485578081 CA366609945 |
344 | P>A | No |
ClinGen gnomAD |
|
|
rs991641840 CA152595147 |
344 | P>H | No |
ClinGen TOPMed gnomAD |
|
|
rs991641840 CA366609950 |
344 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs916964823 CA152595153 |
345 | K>E | No |
ClinGen TOPMed |
|
|
rs769410248 CA4125450 |
347 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA4125449 rs745425816 |
347 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA366610096 rs776107723 |
348 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4125451 rs776107723 |
348 | Y>F | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 349 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1416183812 CA366610157 |
350 | A>S | No |
ClinGen gnomAD |
|
|
rs374173451 CA366610274 |
354 | Q>H | No |
ClinGen ESP ExAC gnomAD |
|
|
rs764542868 CA4125453 |
354 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs762029255 CA4125455 |
357 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA4125457 rs750621099 |
359 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
rs767795115 CA4125456 |
359 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4125460 rs766329360 |
360 | W>C | No |
ClinGen ExAC gnomAD |
|
|
COSM1622717 rs760782462 CA4125459 |
360 | W>L | liver [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs752702368 CA4125461 |
361 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 363 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| rs764010445 | 363 | E>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 365 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs751464783 CA4125464 |
366 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs1396683488 CA366610613 |
367 | Q>R | No |
ClinGen Ensembl |
|
|
rs757102227 CA4125465 |
368 | I>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 369 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4125466 rs781043626 |
375 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1255777026 CA366610836 |
375 | G>R | No |
ClinGen gnomAD |
|
|
CA366610919 rs1417901454 |
377 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1309943144 CA366610963 |
379 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs749815958 CA4125470 |
381 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA366611025 rs1562480719 |
381 | F>L | No |
ClinGen Ensembl |
|
|
rs1355810860 CA366611097 |
383 | P>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1355810860 CA366611081 |
383 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs768978316 CA4125471 |
385 | E>D | No |
ClinGen ExAC |
|
|
CA366611197 rs1419872225 |
386 | R>T | No |
ClinGen gnomAD |
|
|
CA4125491 rs779435465 |
387 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs768201055 CA4125490 |
387 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA366612276 rs1250632040 |
389 | V>M | No |
ClinGen gnomAD |
|
|
CA366612294 rs1191425324 |
390 | T>N | No |
ClinGen gnomAD |
|
|
CA4125494 rs773507723 |
393 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs760953443 CA4125495 |
394 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs771120755 CA4125496 |
395 | M>R | No |
ClinGen ExAC gnomAD |
|
|
rs371006035 CA4125497 |
397 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs765332786 CA4125499 |
399 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1288508629 CA366612409 |
400 | D>H | No |
ClinGen gnomAD |
|
|
CA4125500 rs774464816 |
401 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA366612434 rs1162976053 |
402 | Q>K | No |
ClinGen gnomAD |
|
|
rs199814936 CA4125502 |
405 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA366612509 rs1414980832 |
407 | W>C | No |
ClinGen gnomAD |
|
|
CA366612543 rs755933619 |
409 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs376326730 CA4125506 |
411 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
rs1424105911 CA366612609 |
414 | K>N | No |
ClinGen gnomAD |
|
|
rs1195510412 CA366612604 |
414 | K>R | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 419 | H>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs772585084 CA152597749 |
421 | E>G | No |
ClinGen TOPMed |
|
|
rs758834764 CA4125510 |
422 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA152597766 rs11551171 |
423 | S>L | No |
ClinGen Ensembl |
|
|
rs1405998803 CA366612798 |
423 | S>P | No |
ClinGen gnomAD |
|
| TCGA novel | 424 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs778245646 CA4125511 |
428 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA152597807 rs530108384 |
430 | K>R | No |
ClinGen 1000Genomes TOPMed |
|
|
rs749437686 CA4125536 |
433 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs768835970 CA4125537 |
434 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1283380458 CA366613130 |
438 | F>V | No |
ClinGen gnomAD |
|
|
CA4125539 rs760611208 |
442 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA4125541 rs549332269 |
445 | T>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1241777458 CA366613276 |
446 | L>V | No |
ClinGen gnomAD |
|
|
rs759321115 CA4125542 |
448 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1562482971 CA366613373 |
451 | T>I | No |
ClinGen Ensembl |
|
|
rs1238394790 CA366613527 |
454 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA4125570 rs750944695 |
458 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA4125571 rs756587806 |
464 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1378498176 CA366613774 |
465 | S>C | No |
ClinGen gnomAD |
|
|
rs138033670 CA4125573 |
467 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA366614862 rs1224558250 |
469 | D>E | No |
ClinGen TOPMed |
|
|
CA4125602 rs768314023 |
471 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA366614937 rs1290347562 |
474 | P>S | No |
ClinGen TOPMed |
|
|
rs1188968633 CA366614959 |
475 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA366614961 rs1188968633 |
475 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
CA366614976 rs1308942507 |
478 | I>L | No |
ClinGen TOPMed |
|
|
CA366614987 rs1583169222 |
479 | I>T | No |
ClinGen Ensembl |
|
|
rs772779770 CA4125606 |
480 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 483 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1302074598 CA366615039 |
486 | D>E | No |
ClinGen gnomAD |
|
|
rs1420061915 CA366615032 |
486 | D>N | No |
ClinGen gnomAD |
|
|
CA366615092 rs1238150321 |
494 | T>I | No |
ClinGen gnomAD |
|
|
rs1407220855 CA366615099 |
496 | M>L | No |
ClinGen TOPMed |
|
|
CA152601446 rs1045448378 |
496 | M>T | No |
ClinGen TOPMed |
|
|
CA366615108 rs1583169323 |
497 | Q>E | No |
ClinGen Ensembl |
|
|
rs777255192 CA4125609 |
500 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs765474642 CA366615134 |
501 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs765474642 CA4125611 |
501 | R>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 502 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA366615139 rs1484484426 |
502 | Q>E | No |
ClinGen gnomAD |
|
|
CA366615234 rs1250507536 |
507 | R>S | No |
ClinGen gnomAD |
|
| TCGA novel | 509 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs758489172 CA4125613 |
511 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs377056966 CA4125615 |
516 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs757319830 CA4125616 |
518 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753688567 CA4125618 |
521 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA366615590 rs1490479491 |
522 | N>S | No |
ClinGen TOPMed |
|
|
rs1444624813 CA366615763 |
526 | L>S | No |
ClinGen gnomAD |
|
|
CA4125620 rs778526216 |
531 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs747838544 CA4125621 |
534 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1562487394 CA366618055 |
539 | G>A | No |
ClinGen Ensembl |
|
|
CA366618061 rs768977466 |
540 | V>F | No |
ClinGen ExAC gnomAD |
|
|
rs768977466 CA4125654 |
540 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA366618085 rs1468032837 |
541 | V>L | No |
ClinGen TOPMed |
|
|
rs1271181894 CA366618105 |
542 | T>A | No |
ClinGen TOPMed |
|
|
rs1215830906 CA366618186 |
544 | F>S | No |
ClinGen TOPMed |
|
| TCGA novel | 545 | E>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 548 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA152603932 rs973008044 |
559 | V>I | No |
ClinGen TOPMed |
|
|
CA366618639 rs1356325091 |
561 | M>I | No |
ClinGen gnomAD |
|
|
rs771396373 CA152604898 |
563 | E>D | No |
ClinGen Ensembl |
|
|
CA4125682 rs757106450 |
564 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757106450 CA366619652 |
564 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4125685 rs755611163 |
565 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA4125684 rs764702745 |
565 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs752684831 CA152604928 |
569 | A>V | No |
ClinGen Ensembl |
|
| TCGA novel | 574 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA366619906 rs749812490 |
576 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4125687 rs749812490 |
576 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1441807927 CA366619933 |
577 | F>C | No |
ClinGen gnomAD |
|
|
CA152604939 rs867970557 |
577 | F>L | No |
ClinGen Ensembl |
|
|
rs61742731 CA4125694 |
581 | H>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs773333243 CA4125692 |
581 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA366620044 CA152604962 rs144505700 |
582 | G>R | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA366620100 rs776784371 |
584 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA4125695 rs776784371 |
584 | A>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 585 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1344033351 CA366620149 |
586 | R>Q | No |
ClinGen gnomAD |
|
|
rs531111348 CA4125697 |
586 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA4125699 rs761740699 |
587 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA4125701 rs750069365 |
589 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs150678614 CA4125703 |
592 | Y>C | No |
ClinGen ESP ExAC TOPMed |
|
|
CA366620292 rs1182782020 |
592 | Y>H | No |
ClinGen gnomAD |
|
|
rs1377350348 CA366620330 |
593 | H>R | No |
ClinGen gnomAD |
|
|
CA366620349 rs1174725049 |
594 | V>I | No |
ClinGen gnomAD |
|
|
rs1583174347 CA366620423 |
596 | N>S | No |
ClinGen Ensembl |
|
|
rs1465569018 CA366620543 |
600 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA366620553 rs1330025270 |
601 | E>Q | No |
ClinGen gnomAD |
|
|
CA366620616 rs1237630615 |
603 | I>T | No |
ClinGen TOPMed |
|
|
CA4125707 rs753158948 COSM1205120 |
604 | K>E | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1387455397 CA366621506 |
605 | M>T | No |
ClinGen TOPMed |
|
|
CA366621503 rs1367393702 |
605 | M>V | No |
ClinGen gnomAD |
|
|
CA152610909 rs912694700 |
606 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA4125737 rs772118277 |
607 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs773011897 CA4125738 |
611 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA366621558 rs1361903766 |
612 | N>S | No |
ClinGen TOPMed |
|
|
CA4125739 rs760556072 |
613 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA366621644 rs776284204 |
617 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs759126862 CA4125742 |
619 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA366621875 rs1214857231 |
626 | A>V | No |
ClinGen gnomAD |
|
|
CA366622091 rs1253796409 |
631 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
CA4125785 rs773835538 |
632 | N>S | No |
ClinGen ExAC gnomAD |
|
|
COSM266453 CA4125787 rs766601514 |
633 | G>S | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1422875805 CA366622130 |
634 | A>G | No |
ClinGen gnomAD |
|
|
rs754100862 CA4125788 |
634 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA366622145 rs1464106865 |
636 | A>T | No |
ClinGen gnomAD |
|
|
CA4125789 rs759606657 |
636 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1264951291 CA366622175 |
638 | V>L | No |
ClinGen TOPMed |
|
|
CA366622204 rs1292089661 |
640 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
rs76153980 CA4125792 |
641 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs76153980 CA366622216 |
641 | S>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA152612000 rs181409131 |
644 | T>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM178363 rs181409131 CA4125794 |
644 | T>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs181409131 CA366622259 |
644 | T>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA366622265 rs1444966876 |
645 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1212256812 CA366622277 |
646 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1387296838 CA366622279 |
646 | M>T | No |
ClinGen TOPMed |
|
|
rs1212256812 CA366622276 |
646 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA366622298 rs1274510900 |
647 | N>I | No |
ClinGen TOPMed gnomAD |
|
|
rs748975334 CA4125797 |
648 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA4125799 rs778618845 |
649 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA152612091 rs962331607 |
653 | M>V | No |
ClinGen TOPMed |
|
|
CA152612116 rs1028013325 |
656 | D>N | No |
ClinGen TOPMed |
|
|
rs139537965 CA4125803 |
657 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA4125805 rs776923545 |
658 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA |
|
rs1162940545 CA366622421 |
658 | E>V | No |
ClinGen gnomAD |
|
|
CA366622484 rs1367743504 COSM1205119 |
664 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA4125807 rs370274071 |
666 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1433522894 CA366622516 |
667 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA366622528 rs1583179313 |
668 | T>P | No |
ClinGen Ensembl |
|
| TCGA novel | 671 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1227280036 CA366622590 |
673 | W>G | No |
ClinGen gnomAD |
|
|
rs1312430252 CA366622623 |
675 | H>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1361173055 CA366622638 |
676 | K>E | No |
ClinGen gnomAD |
|
|
CA152614011 rs981973735 |
677 | V>L | No |
ClinGen TOPMed |
|
|
CA366623334 rs777551343 |
680 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758187488 CA4125836 |
680 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA4125837 rs777551343 |
680 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 682 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1583181697 CA366623376 |
682 | W>S | No |
ClinGen Ensembl |
|
|
rs746336469 CA4125841 |
684 | W>G | No |
ClinGen ExAC gnomAD |
|
|
CA152614061 rs201207559 |
685 | T>A | No |
ClinGen Ensembl |
|
|
rs1344147935 CA366623431 |
685 | T>S | No |
ClinGen gnomAD |
|
|
CA4125844 rs749650814 |
689 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs774537093 CA4125846 |
690 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA366623543 rs1435932274 |
693 | K>N | No |
ClinGen TOPMed |
|
|
rs761842037 CA4125847 |
693 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA366623560 rs1246499236 |
694 | N>K | No |
ClinGen gnomAD |
|
|
rs1583181826 CA366623601 |
697 | D>A | No |
ClinGen Ensembl |
|
|
CA366623616 rs1257931642 |
698 | R>C | No |
ClinGen TOPMed |
|
|
rs1211527019 CA366623617 |
698 | R>H | No |
ClinGen TOPMed |
|
|
rs1562491960 CA366623706 |
705 | R>W | No |
ClinGen Ensembl |
|
|
CA4125850 rs759448511 |
706 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA366623723 rs1350744799 |
706 | P>L | No |
ClinGen TOPMed |
|
|
CA366623716 rs759448511 |
706 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA366623732 rs1583181912 |
707 | R>P | No |
ClinGen Ensembl |
|
|
rs765257628 CA4125851 |
707 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs1411313858 CA366623743 |
708 | P>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1411313858 CA366623741 |
708 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs149974474 CA4125854 |
709 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4125853 rs149974474 |
709 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1583181948 CA366623754 |
710 | T>P | No |
ClinGen Ensembl |
|
|
CA366623758 rs1402917335 |
710 | T>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1346094497 CA366623764 |
711 | L>H | No |
ClinGen gnomAD |
|
|
CA366623770 rs1583181995 |
712 | L>P | No |
ClinGen Ensembl |
|
|
CA4125860 rs756683173 |
713 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4125859 rs756683173 |
713 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749705803 CA4125861 |
714 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 714 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1351296071 CA366623812 |
716 | Q>E | No |
ClinGen gnomAD |
|
|
CA366623834 rs1289514448 |
717 | I>N | No |
ClinGen gnomAD |
|
|
rs1182820982 CA366625013 |
719 | Q>E | No |
ClinGen TOPMed |
|
| TCGA novel | 719 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1269950726 CA366625039 |
720 | I>T | No |
ClinGen TOPMed |
|
|
rs1459811692 CA366625032 |
720 | I>V | No |
ClinGen TOPMed |
|
|
rs1353402683 CA366625075 |
722 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
CA4125897 rs779270785 |
726 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1241997159 CA366625159 |
729 | K>Q | No |
ClinGen gnomAD |
|
|
CA152616820 rs753122413 |
730 | I>F | No |
ClinGen Ensembl |
|
|
rs1459633460 CA366625187 |
730 | I>M | No |
ClinGen gnomAD |
|
|
CA152616836 rs1053681761 |
733 | Q>K | No |
ClinGen Ensembl |
|
|
rs1243416838 CA366625245 |
734 | K>N | No |
ClinGen gnomAD |
|
|
rs1418263620 COSM1450090 CA366625264 |
736 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA4125899 rs758656120 |
736 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA366625325 rs1365425855 |
740 | S>C | No |
ClinGen gnomAD |
|
|
CA4125900 rs778085611 |
741 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1387256170 CA366625335 |
741 | K>T | No |
ClinGen gnomAD |
|
|
rs1403998405 CA366625372 |
744 | K>E | No |
ClinGen gnomAD |
|
|
rs747989107 CA4125926 |
751 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1450091 rs375864470 CA4125927 |
751 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs772928713 CA4125928 |
752 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs746790542 CA4125930 |
754 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs746790542 CA4125929 |
754 | M>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 756 | D>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4125933 rs373039793 |
758 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs759115078 CA366625729 |
758 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA366625766 rs1367932649 |
759 | K>Q | No |
ClinGen gnomAD |
|
|
rs768402273 CA4125937 |
761 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4125936 rs768402273 |
761 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1288864122 CA366625817 |
761 | R>W | No |
ClinGen gnomAD |
|
|
CA152617399 rs202106605 |
764 | A>V | No |
ClinGen gnomAD |
|
|
CA366625912 rs1271094192 |
765 | Q>* | No |
ClinGen TOPMed |
|
|
CA366625932 rs1244892554 |
765 | Q>H | No |
ClinGen gnomAD |
|
|
rs1223124168 CA366625967 |
768 | Y>S | No |
ClinGen gnomAD |
|
|
CA366626010 rs1241483705 |
770 | E>Q | No |
ClinGen gnomAD |
|
|
rs1490262821 CA366626020 |
770 | E>V | No |
ClinGen TOPMed |
|
|
CA366626092 rs756242706 |
773 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1484919911 CA366626079 |
773 | N>Y | No |
ClinGen gnomAD |
|
|
rs150993211 CA4125942 |
774 | E>K | No |
ClinGen ESP ExAC gnomAD |
|
|
CA366626101 rs150993211 |
774 | E>Q | No |
ClinGen ESP ExAC gnomAD |
|
|
rs921250675 CA152617438 |
775 | R>H | No |
ClinGen TOPMed |
|
|
CA366626163 rs1161995207 |
777 | E>K | No |
ClinGen gnomAD |
|
|
rs758339172 CA366626226 |
779 | R>P | No |
ClinGen ExAC gnomAD |
|
|
CA4125944 COSM1251081 rs758339172 |
779 | R>Q | oesophagus [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1344841746 CA366626449 |
782 | V>A | No |
ClinGen gnomAD |
|
|
CA4125970 rs141884022 |
786 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA152617910 rs373945753 |
786 | E>V | No |
ClinGen Ensembl |
|
|
CA152617912 rs367843382 |
788 | D>A | No |
ClinGen Ensembl |
|
| TCGA novel | 788 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs970395745 CA152617914 |
789 | S>G | No |
ClinGen Ensembl |
|
|
rs1195442825 CA366626605 |
789 | S>N | No |
ClinGen gnomAD |
|
|
rs980494734 CA152617927 |
790 | N>S | No |
ClinGen Ensembl |
|
|
rs768241779 CA4125972 |
791 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1446248317 CA366626688 |
792 | D>G | No |
ClinGen TOPMed |
|
|
CA152617942 rs1063257 VAR_047973 |
793 | D>E | No |
ClinGen UniProt Ensembl dbSNP |
|
|
rs867485485 CA366626704 |
793 | D>N | No |
ClinGen gnomAD |
|
|
CA152617941 rs867485485 |
793 | D>Y | No |
ClinGen gnomAD |
|
|
rs1479744250 CA366626837 |
797 | E>D | No |
ClinGen gnomAD |
|
|
rs1166937303 CA366626958 |
803 | V>F | No |
ClinGen gnomAD |
|
|
rs1166937303 CA366626954 |
803 | V>I | No |
ClinGen gnomAD |
|
|
rs773519251 CA4125976 |
804 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs761091640 CA4125977 |
804 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs866457149 CA152617966 |
805 | E>* | No |
ClinGen gnomAD |
|
|
CA366626969 rs866457149 |
805 | E>K | No |
ClinGen gnomAD |
|
|
rs1364827221 CA366626990 |
807 | I>M | No |
ClinGen gnomAD |
|
|
rs1304955888 CA366626998 |
808 | I>T | No |
ClinGen gnomAD |
|
|
rs1403016435 CA366626992 |
808 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA4125978 rs766546329 |
809 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 809 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA366627014 rs1226844384 |
810 | L>F | No |
ClinGen gnomAD |
|
|
rs1341769799 CA366627021 |
811 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1291519010 CA366627055 |
813 | Q>R | No |
ClinGen gnomAD |
|
|
CA366627069 rs776869255 |
814 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA152617968 rs372896684 |
814 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA4125979 rs776869255 |
814 | E>V | No |
ClinGen ExAC gnomAD |
No associated diseases with P55884
8 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasmic stress granule | A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| eukaryotic 43S preinitiation complex | A protein complex composed of the 40S ribosomal subunit plus eIF1A, eIF3, and eIF2-GTP-bound methionyl-initiator methionine tRNA. |
| eukaryotic 48S preinitiation complex | A protein complex composed of the small ribosomal subunit, eIF3, eIF1A, methionyl-initiatior methionine and a capped mRNA. The complex is initially positioned at the 5'-end of the capped mRNA. |
| eukaryotic translation initiation factor 3 complex | A complex of several polypeptides that plays at least two important roles in protein synthesis: First, eIF3 binds to the 40S ribosome and facilitates loading of the Met-tRNA/eIF2.GTP ternary complex to form the 43S preinitiation complex. Subsequently, eIF3 apparently assists eIF4 in recruiting mRNAs to the 43S complex. The eIF3 complex contains five conserved core subunits, and may contain several additional proteins; the non-core subunits are thought to mediate association of the complex with specific sets of mRNAs. |
| eukaryotic translation initiation factor 3 complex, eIF3m | An eukaryotic translation initiation factor 3 complex that contains the PCI-domain protein eIF3m. |
| extracellular exosome | A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
| synapse | The junction between an axon of one neuron and a dendrite of another neuron, a muscle fiber or a glial cell. As the axon approaches the synapse it enlarges into a specialized structure, the presynaptic terminal bouton, which contains mitochondria and synaptic vesicles. At the tip of the terminal bouton is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic terminal bouton secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| molecular adaptor activity | The binding activity of a molecule that brings together two or more molecules through a selective, non-covalent, often stoichiometric interaction, permitting those molecules to function in a coordinated way. |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
| translation initiation factor activity | Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide. |
| translation initiation factor binding | Binding to a translation initiation factor, any polypeptide factor involved in the initiation of ribosome-mediated translation. |
5 GO annotations of biological process
| Name | Definition |
|---|---|
| formation of cytoplasmic translation initiation complex | Joining of the large subunit, with release of IF2/eIF2 and IF3/eIF3. This leaves the functional ribosome at the AUG, with the methionyl/formyl-methionyl-tRNA positioned at the P site. |
| IRES-dependent viral translational initiation | Process by which viral mRNA translation is initiated, where a domain in the 5' untranslated region (UTR) of the viral mRNA called an internal ribosome entry site (IRES) binds the host 43S preinitiation complex, circumventing regular cap-dependent translation initiation. |
| regulation of translational initiation | Any process that modulates the frequency, rate or extent of translational initiation. |
| translational initiation | The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA. |
| viral translational termination-reinitiation | A process which occurs as part of viral mRNA translation which allows expression of a downstream open reading frame (ORF) in a dicistronic mRNA. In this process, ribosomes translate the upstream ORF but following termination, a proportion of 40S subunits remain tethered to the mRNA and go on to re-initiate translation at the start codon of the downstream ORF. |
4 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| A7MB16 | EIF3B | Eukaryotic translation initiation factor 3 subunit B | Bos taurus (Bovine) | PR |
| Q8JZQ9 | Eif3b | Eukaryotic translation initiation factor 3 subunit B | Mus musculus (Mouse) | PR |
| Q4G061 | Eif3b | Eukaryotic translation initiation factor 3 subunit B | Rattus norvegicus (Rat) | PR |
| Q9XWI6 | eif-3.B | Eukaryotic translation initiation factor 3 subunit B | Caenorhabditis elegans | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MQDAENVAVP | EAAEERAEPG | QQQPAAEPPP | AEGLLRPAGP | GAPEAAGTEA | SSEEVGIAEA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| GPESEVRTEP | AAEAEAASGP | SESPSPPAAE | ELPGSHAEPP | VPAQGEAPGE | QARDERSDSR |
| 130 | 140 | 150 | 160 | 170 | 180 |
| AQAVSEDAGG | NEGRAAEAEP | RALENGDADE | PSFSDPEDFV | DDVSEEELLG | DVLKDRPQEA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| DGIDSVIVVD | NVPQVGPDRL | EKLKNVIHKI | FSKFGKITND | FYPEEDGKTK | GYIFLEYASP |
| 250 | 260 | 270 | 280 | 290 | 300 |
| AHAVDAVKNA | DGYKLDKQHT | FRVNLFTDFD | KYMTISDEWD | IPEKQPFKDL | GNLRYWLEEA |
| 310 | 320 | 330 | 340 | 350 | 360 |
| ECRDQYSVIF | ESGDRTSIFW | NDVKDPVSIE | ERARWTETYV | RWSPKGTYLA | TFHQRGIALW |
| 370 | 380 | 390 | 400 | 410 | 420 |
| GGEKFKQIQR | FSHQGVQLID | FSPCERYLVT | FSPLMDTQDD | PQAIIIWDIL | TGHKKRGFHC |
| 430 | 440 | 450 | 460 | 470 | 480 |
| ESSAHWPIFK | WSHDGKFFAR | MTLDTLSIYE | TPSMGLLDKK | SLKISGIKDF | SWSPGGNIIA |
| 490 | 500 | 510 | 520 | 530 | 540 |
| FWVPEDKDIP | ARVTLMQLPT | RQEIRVRNLF | NVVDCKLHWQ | KNGDYLCVKV | DRTPKGTQGV |
| 550 | 560 | 570 | 580 | 590 | 600 |
| VTNFEIFRMR | EKQVPVDVVE | MKETIIAFAW | EPNGSKFAVL | HGEAPRISVS | FYHVKNNGKI |
| 610 | 620 | 630 | 640 | 650 | 660 |
| ELIKMFDKQQ | ANTIFWSPQG | QFVVLAGLRS | MNGALAFVDT | SDCTVMNIAE | HYMASDVEWD |
| 670 | 680 | 690 | 700 | 710 | 720 |
| PTGRYVVTSV | SWWSHKVDNA | YWLWTFQGRL | LQKNNKDRFC | QLLWRPRPPT | LLSQEQIKQI |
| 730 | 740 | 750 | 760 | 770 | 780 |
| KKDLKKYSKI | FEQKDRLSQS | KASKELVERR | RTMMEDFRKY | RKMAQELYME | QKNERLELRG |
| 790 | 800 | 810 | |||
| GVDTDELDSN | VDDWEEETIE | FFVTEEIIPL | GNQE |