P32248
Gene name |
CCR7 (CMKBR7, EBI1, EVI1) |
Protein name |
C-C chemokine receptor type 7 |
Names |
|
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:1236 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
2 structures for P32248
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 6QZH | X-ray | 210 A | A | 46-247 | PDB |
| AF-P32248-F1 | Predicted | AlphaFoldDB |
240 variants for P32248
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA8545017 rs773702421 |
2 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1468924854 CA399365609 |
3 | L>P | No |
ClinGen gnomAD |
|
|
rs111607645 CA290545336 |
7 | M>T | No |
ClinGen Ensembl |
|
|
rs2228015 VAR_049383 CA8545000 |
7 | M>V | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
| TCGA novel | 9 | S>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8544999 rs773718925 |
9 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8544997 rs762121218 COSM3787325 |
10 | V>M | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA290545298 rs923958590 |
12 | V>A | No |
ClinGen TOPMed |
|
|
rs774486933 CA8544996 |
12 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1329888154 CA399364224 |
13 | V>L | No |
ClinGen gnomAD |
|
|
rs749396477 CA8544994 |
14 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749396477 CA399364210 |
14 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 15 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8544993 rs374537899 |
16 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8544970 rs778708879 |
21 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1597722440 CA399362898 |
25 | Q>E | No |
ClinGen Ensembl |
|
| TCGA novel | 25 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs558849085 CA8544968 |
26 | D>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA399362866 rs1214374605 |
27 | E>D | No |
ClinGen gnomAD |
|
|
CA8544967 rs779737131 |
29 | T>M | No |
ClinGen ExAC gnomAD |
|
|
CA8544964 rs781615646 |
30 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1679784 CA290543379 rs373108256 |
31 | D>N | lung [Cosmic] | No |
ClinGen cosmic curated ESP TOPMed gnomAD |
|
rs1597722416 CA399362808 |
33 | I>V | No |
ClinGen Ensembl |
|
|
CA399362782 rs1398049455 |
35 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1161074222 CA399362769 |
36 | N>S | No |
ClinGen TOPMed |
|
|
CA399362757 rs1410324774 |
37 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA399362759 rs1410324774 |
37 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA8544963 rs757771580 |
40 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs751884593 CA8544962 |
43 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA399362683 rs35928598 |
44 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1242577184 CA399362678 |
45 | E>K | No |
ClinGen gnomAD |
|
|
CA399362677 rs1242577184 |
45 | E>Q | No |
ClinGen gnomAD |
|
| TCGA novel | 46 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA399362641 rs1463009610 |
48 | C>R | No |
ClinGen gnomAD |
|
|
rs752966484 CA8544959 |
49 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
CA290543349 rs369773173 |
52 | D>Y | No |
ClinGen ESP |
|
|
rs776754449 CA8544956 |
54 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs759676455 COSM256564 CA399362574 |
54 | R>W | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1381620262 CA399362563 |
55 | N>S | No |
ClinGen gnomAD |
|
|
CA399362531 rs1412136603 |
58 | A>G | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 59 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs771915374 CA8544955 |
59 | W>S | No |
ClinGen ExAC gnomAD |
|
|
CA8544954 rs761745878 |
60 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs1313242139 CA399362511 |
61 | L>F | No |
ClinGen TOPMed |
|
|
CA399362509 rs1318786556 |
61 | L>P | No |
ClinGen TOPMed |
|
|
rs1442908309 CA399362497 |
63 | I>S | No |
ClinGen gnomAD |
|
|
rs774048376 CA8544953 |
63 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768527003 CA8544952 |
64 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749072929 CA8544951 |
65 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1348460473 CA399362474 |
67 | I>V | No |
ClinGen TOPMed |
|
| TCGA novel | 68 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA399362459 rs1422932247 |
69 | C>R | No |
ClinGen gnomAD |
|
| TCGA novel | 70 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8544949 rs375638802 |
71 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA290543331 rs916242686 |
72 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA399362434 rs1177127089 |
73 | L>I | No |
ClinGen gnomAD |
|
|
CA290543325 rs527363153 |
75 | G>S | No |
ClinGen Ensembl |
|
|
CA399362408 rs1234934733 |
77 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1013068828 CA290543322 |
79 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA8544944 rs778119660 |
80 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1407261794 CA399362385 |
81 | L>F | No |
ClinGen TOPMed |
|
|
rs569744185 CA8544943 |
81 | L>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA399362374 rs1397158566 |
83 | Y>C | No |
ClinGen gnomAD |
|
|
CA8544939 rs753865062 |
94 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs766444905 CA8544938 |
101 | A>E | No |
ClinGen ExAC gnomAD |
|
|
CA8544937 rs761681023 |
105 | I>N | No |
ClinGen ExAC gnomAD |
|
|
rs187022118 CA8544936 |
106 | L>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs867209804 CA290543295 |
107 | F>I | No |
ClinGen Ensembl |
|
|
CA399362085 rs1426858957 |
110 | T>I | No |
ClinGen gnomAD |
|
|
CA8544934 rs536242338 |
115 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA399362028 rs536242338 |
115 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA399361999 rs1322548567 |
117 | S>G | No |
ClinGen TOPMed |
|
|
rs369179451 CA8544933 |
117 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA290543285 rs147082234 |
118 | A>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA8544931 rs147082234 |
118 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
rs770522078 CA8544928 |
119 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA8544927 rs746470132 |
120 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA290543260 rs748522049 |
125 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA8544924 rs748522049 |
125 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA290543254 rs891813036 |
126 | V>A | No |
ClinGen TOPMed |
|
|
CA8544923 rs765943208 |
126 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1233129803 CA399361842 |
131 | L>P | No |
ClinGen gnomAD |
|
|
rs1350685141 CA399361837 |
132 | I>T | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 133 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs754045581 CA8544921 |
133 | F>V | No |
ClinGen ExAC gnomAD |
|
|
rs1345900866 CA399361804 |
134 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1285016794 CA399361797 |
134 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA8544919 rs756261392 |
135 | I>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 140 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA399361653 rs1174884909 |
141 | F>L | No |
ClinGen gnomAD |
|
|
rs1347104209 CA399361658 |
141 | F>S | No |
ClinGen gnomAD |
|
|
rs1454375599 CA399361665 |
141 | F>V | No |
ClinGen gnomAD |
|
|
rs374509706 CA290543243 |
144 | M>L | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs762928024 CA8544916 |
149 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA399361493 rs1426316087 |
150 | I>L | No |
ClinGen gnomAD |
|
|
rs765073874 CA8544914 |
152 | I>L | No |
ClinGen ExAC gnomAD |
|
|
CA8544913 rs759228506 |
152 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA399361394 rs1260772946 |
154 | R>C | No |
ClinGen gnomAD |
|
|
CA399361387 rs1334562059 |
154 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs760286309 CA8544910 |
156 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA399361336 rs1216578084 |
157 | A>D | No |
ClinGen gnomAD |
|
|
rs772570112 CA8544908 |
160 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA399361244 rs1297487522 |
163 | S>A | No |
ClinGen TOPMed |
|
|
rs1383043268 CA399361219 |
164 | A>V | No |
ClinGen gnomAD |
|
|
CA399361213 rs1364141913 |
165 | H>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA8544907 rs748611989 |
166 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA399361197 rs1469701969 |
166 | R>H | No |
ClinGen gnomAD |
|
|
CA399361173 rs1203341738 |
168 | R>C | No |
ClinGen TOPMed |
|
|
CA8544905 rs368303609 |
168 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8544904 rs575312747 |
170 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs374373475 CA8544903 |
170 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8544902 rs756277812 |
171 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA399361077 rs1182483186 |
175 | S>N | No |
ClinGen gnomAD |
|
|
rs1461677737 CA399361056 |
176 | K>R | No |
ClinGen gnomAD |
|
| TCGA novel | 177 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 183 | W>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs367912385 CA8544901 |
183 | W>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
rs781356213 CA8544900 |
188 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1169979338 CA399360692 |
197 | S>C | No |
ClinGen TOPMed |
|
|
rs1452024550 CA399360654 |
199 | L>F | No |
ClinGen gnomAD |
|
|
CA399360623 rs1339265756 |
201 | R>K | No |
ClinGen gnomAD |
|
|
rs1597721988 CA399360607 |
202 | S>I | No |
ClinGen Ensembl |
|
|
rs976630110 CA290543188 |
202 | S>R | No |
ClinGen Ensembl |
|
|
rs1597721978 CA399360564 |
206 | Q>K | No |
ClinGen Ensembl |
|
|
rs141181444 CA8544897 COSM978908 |
207 | A>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA290543180 rs796269334 |
208 | M>I | No |
ClinGen TOPMed |
|
|
CA399360533 rs1168897832 |
208 | M>T | No |
ClinGen gnomAD |
|
|
CA399360525 rs1463167209 |
209 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA8544895 rs753561165 COSM1382993 |
209 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs760174954 CA8544893 |
211 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
rs771518819 CA8544891 |
217 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1597721942 CA399360453 |
219 | A>D | No |
ClinGen Ensembl |
|
|
rs1213836608 CA399360446 |
220 | F>S | No |
ClinGen TOPMed |
|
|
rs1197360636 CA399360434 |
222 | T>A | No |
ClinGen gnomAD |
|
|
CA290543134 rs909712800 |
223 | I>L | No |
ClinGen TOPMed |
|
|
CA8544888 rs769043644 |
224 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8544889 rs774882536 |
224 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA8544887 rs749719840 |
226 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA399360411 rs749719840 |
226 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs985656100 CA290543125 |
227 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
rs968486927 CA290543124 |
229 | V>A | No |
ClinGen Ensembl |
|
|
CA8544886 rs780226426 |
229 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770060413 CA290543123 |
230 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8544884 rs746049008 |
231 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA399360380 rs746049008 |
231 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 232 | F>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1329912881 CA399360362 |
234 | V>I | No |
ClinGen gnomAD |
|
|
rs1364164746 CA399360351 |
235 | P>L | No |
ClinGen gnomAD |
|
|
CA399360356 rs1244378072 |
235 | P>T | No |
ClinGen TOPMed |
|
|
CA399360350 rs1567828701 |
236 | L>V | No |
ClinGen Ensembl |
|
|
rs781540430 CA8544883 COSM1302773 |
239 | M>I | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
| TCGA novel | 239 | M>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs757451307 CA8544882 |
242 | C>Y | No |
ClinGen ExAC |
|
|
rs1469529906 CA399360295 |
244 | L>I | No |
ClinGen gnomAD |
|
|
CA8544880 rs778966516 |
245 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1364316953 CA399360289 |
245 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA399360288 rs1364316953 |
245 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA399360280 rs1447278791 |
246 | I>T | No |
ClinGen gnomAD |
|
|
rs1208984488 CA399360284 |
246 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1267998736 CA399360276 |
247 | I>V | No |
ClinGen gnomAD |
|
|
rs568161538 CA8544878 |
248 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA8544877 rs760394768 |
248 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8544876 rs760394768 |
248 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs895948660 CA290543085 |
249 | T>S | No |
ClinGen Ensembl |
|
|
CA8544872 rs375301390 |
254 | R>C | No |
ClinGen ESP ExAC gnomAD |
|
|
rs764674952 CA8544871 |
254 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA399360206 rs1405128587 |
258 | R>C | No |
ClinGen gnomAD |
|
|
rs1429679870 CA399360205 |
258 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA8544868 rs370269806 |
259 | N>K | No |
ClinGen ESP ExAC gnomAD |
|
|
rs761587861 CA8544869 |
259 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1399630591 CA399360186 |
261 | A>S | No |
ClinGen gnomAD |
|
|
rs1234451864 CA399360185 |
261 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA8544867 rs746202899 |
266 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA290543064 rs764245161 |
267 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA8544865 rs145153052 |
270 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8544864 rs747098550 |
271 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs941995546 CA290543061 |
271 | V>F | No |
ClinGen Ensembl |
|
|
CA290543056 rs1044656618 |
273 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs62066592 CA290543052 |
281 | G>W | No |
ClinGen Ensembl |
|
|
rs1285100435 CA399360053 |
282 | V>M | No |
ClinGen gnomAD |
|
|
CA399360037 rs1211106083 |
285 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs768993004 CA8544860 |
287 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8544858 rs750217276 COSM978906 |
290 | N>S | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs767218654 CA8544857 |
293 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs140869107 CA8544856 |
296 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA399359951 rs1408549512 |
297 | T>I | No |
ClinGen TOPMed |
|
|
CA399359919 rs1468121375 |
302 | K>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs934578746 CA290543032 |
303 | Q>K | No |
ClinGen Ensembl |
|
|
rs775899752 CA8544852 |
307 | A>T | Variant assessed as Somatic; 4.619e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA8544850 rs116263918 |
308 | Y>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8544848 rs771282973 |
309 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs773362430 CA8544846 |
310 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1597721680 CA399359858 |
311 | T>P | No |
ClinGen Ensembl |
|
|
CA399359853 rs1243087807 COSM3795584 |
312 | Y>H | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA399359851 rs1597721669 |
312 | Y>S | No |
ClinGen Ensembl |
|
|
rs1204924704 CA399359837 |
314 | L>V | No |
ClinGen gnomAD |
|
| TCGA novel | 315 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA399359824 rs1271374255 |
316 | C>Y | No |
ClinGen gnomAD |
|
|
CA8544843 rs200720683 |
317 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8544842 rs371206760 |
318 | R>C | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1228290406 CA399359812 |
318 | R>H | No |
ClinGen TOPMed |
|
|
rs780902189 CA8544840 |
321 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8544837 rs763782549 |
327 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752234593 CA8544835 |
330 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA290542964 rs994101385 COSM1640681 |
331 | V>I | stomach [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA8544833 rs146694134 |
334 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM978905 rs1442842565 CA399359702 |
334 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA8544832 rs754285590 |
335 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs761077309 CA8544830 |
337 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs761077309 CA399359684 |
337 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1204304294 CA399359673 |
338 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1179893237 CA399359678 |
338 | F>V | No |
ClinGen TOPMed |
|
|
rs148614545 CA8544828 |
339 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA399359629 rs1597721579 |
343 | D>A | No |
ClinGen Ensembl |
|
|
rs774431889 CA8544826 |
343 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs769732065 CA8544825 |
344 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA399359606 rs1315206470 |
345 | G>D | No |
ClinGen gnomAD |
|
|
CA8544823 rs780990133 |
348 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs1442681961 CA399359054 |
352 | L>F | No |
ClinGen gnomAD |
|
|
CA8544821 rs746812817 |
353 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1382991 CA8544820 rs200794532 |
353 | R>Q | Variant assessed as Somatic; 0.0001387 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs746812817 CA399359050 |
353 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA290542916 rs200037144 |
354 | Q>L | No |
ClinGen Ensembl |
|
|
CA8544819 rs758006926 |
355 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA290542869 rs143854738 |
359 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8544815 rs143854738 |
359 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs755563290 CA8544816 |
359 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772407156 CA290542865 |
361 | I>N | No |
ClinGen Ensembl |
|
|
CA8544813 rs761014378 |
362 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs150068770 CA8544814 |
362 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs947333410 CA290542853 |
363 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA8544812 rs374797000 |
363 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1291820003 CA399358984 |
364 | S>F | No |
ClinGen gnomAD |
|
|
CA399358979 rs1314998798 |
365 | S>Y | No |
ClinGen gnomAD |
|
|
CA290542835 rs991139043 |
366 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1224336941 CA399358974 |
366 | M>T | No |
ClinGen gnomAD |
|
|
CA290542841 rs915570645 |
366 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA399358962 rs1270872282 |
368 | V>M | No |
ClinGen TOPMed |
|
|
rs1365219236 CA399358942 |
371 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs763002099 CA8544807 |
377 | S>A | No |
ClinGen ExAC gnomAD |
No associated diseases with P32248
1 regional properties for P32248
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | GPCR, rhodopsin-like, 7TM | 75 - 326 | IPR017452 |
5 GO annotations of cellular component
| Name | Definition |
|---|---|
| cell surface | The external part of the cell wall and/or plasma membrane. |
| external side of plasma membrane | The leaflet of the plasma membrane that faces away from the cytoplasm and any proteins embedded or anchored in it or attached to its surface. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
7 GO annotations of molecular function
| Name | Definition |
|---|---|
| C-C chemokine binding | Binding to a C-C chemokine; C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif. |
| C-C chemokine receptor activity | Combining with a C-C chemokine and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif. |
| C-C motif chemokine 19 receptor activity | Combining with the C-C motif chemokine 19 (CCL19) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. |
| C-C motif chemokine 21 receptor activity | Combining with the C-C motif chemokine 21 (CCL21) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. |
| chemokine (C-C motif) ligand 19 binding | Binding to chemokine (C-C motif) ligand 19. |
| chemokine (C-C motif) ligand 21 binding | Binding to chemokine (C-C motif) ligand 21. |
| G protein-coupled receptor activity | Combining with an extracellular signal and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex. |
47 GO annotations of biological process
| Name | Definition |
|---|---|
| activation of GTPase activity | Any process that initiates the activity of an inactive GTPase through the replacement of GDP by GTP. |
| calcium-mediated signaling | Any intracellular signal transduction in which the signal is passed on within the cell via calcium ions. |
| cell chemotaxis | The directed movement of a motile cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis). |
| cellular response to cytokine stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus. |
| dendritic cell chemotaxis | The movement of a dendritic cell in response to an external stimulus. |
| establishment of T cell polarity | The directed orientation of T cell signaling molecules and associated membrane rafts towards a chemokine gradient or a contact point with antigen presenting cell. |
| G protein-coupled receptor signaling pathway | The series of molecular signals initiated by a ligand binding to its receptor, in which the activated receptor promotes the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction, and ends with regulation of a downstream cellular process. The pathway can start from the plasma membrane, Golgi or nuclear membrane. |
| homeostasis of number of cells | Any biological process involved in the maintenance of the steady-state number of cells within a population of cells. |
| immune response | Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. |
| inflammatory response | The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages. |
| lymphocyte migration into lymph node | The movement of a lymphocyte within the lymphatic system into a lymph node, and its subsequent positioning within defined functional compartments such as sites of cell activation by antigen. |
| mature conventional dendritic cell differentiation | The process in which antigen-activated dendritic cells acquire the specialized features of a mature conventional dendritic cell. Mature conventional dendritic cells upregulate the surface expression of MHC molecules, chemokine receptors and adhesion molecules, and increase the number of dendrites (cytoplasmic protrusions) in preparation for migration to lymphoid organs where they present antigen to T cells. |
| myeloid dendritic cell chemotaxis | The movement of a myeloid dendritic cell in response to an external stimulus. |
| negative regulation of dendritic cell apoptotic process | Any process that stops, prevents or reduces the frequency, rate or extent of dendritic cell apoptotic process. |
| negative regulation of interleukin-12 production | Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-12 production. |
| negative thymic T cell selection | The process of elimination of immature T cells in the thymus which react strongly with self-antigens. |
| positive regulation of actin filament polymerization | Any process that activates or increases the frequency, rate or extent of actin polymerization. |
| positive regulation of cell adhesion | Any process that activates or increases the frequency, rate or extent of cell adhesion. |
| positive regulation of cell motility | Any process that activates or increases the frequency, rate or extent of cell motility. |
| positive regulation of cell-matrix adhesion | Any process that activates or increases the rate or extent of cell adhesion to an extracellular matrix. |
| positive regulation of cytosolic calcium ion concentration | Any process that increases the concentration of calcium ions in the cytosol. |
| positive regulation of dendritic cell antigen processing and presentation | Any process that activates or increases the frequency, rate, or extent of dendritic cell antigen processing and presentation. |
| positive regulation of dendritic cell chemotaxis | Any process that activates or increases the frequency, rate or extent of dendritic cell chemotaxis. |
| positive regulation of ERK1 and ERK2 cascade | Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade. |
| positive regulation of filopodium assembly | Any process that activates or increases the frequency, rate or extent of the assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone. |
| positive regulation of glycoprotein biosynthetic process involved in immunological synapse formation | Any positive regulation of glycoprotein biosynthetic process that is involved in immunological synapse formation. |
| positive regulation of humoral immune response | Any process that activates or increases the frequency, rate, or extent of a humoral immune response. |
| positive regulation of hypersensitivity | Any process that activates or increases the frequency, rate, or extent of hypersensitivity. |
| positive regulation of I-kappaB kinase/NF-kappaB signaling | Any process that activates or increases the frequency, rate or extent of I-kappaB kinase/NF-kappaB signaling. |
| positive regulation of immunological synapse formation | Any process that activates or increases the frequency, rate or extent of immunological synapse formation. |
| positive regulation of interleukin-12 production | Any process that activates or increases the frequency, rate, or extent of interleukin-12 production. |
| positive regulation of JNK cascade | Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade. |
| positive regulation of neutrophil chemotaxis | Any process that increases the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding. |
| positive regulation of phosphatidylinositol 3-kinase activity | Any process that activates or increases the frequency, rate or extent of phosphatidylinositol 3-kinase activity. |
| positive regulation of protein kinase activity | Any process that activates or increases the frequency, rate or extent of protein kinase activity. |
| positive regulation of protein kinase B signaling | Any process that activates or increases the frequency, rate or extent of protein kinase B signaling, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B. |
| positive regulation of pseudopodium assembly | Any process that activates or increases the frequency, rate or extent of the assembly of pseudopodia. |
| positive regulation of T cell costimulation | Any process that activates or increases the frequency, rate or extent of T cell costimulation. |
| positive regulation of T cell receptor signaling pathway | Any process that activates or increases the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell. |
| regulation of dendritic cell dendrite assembly | Any process that modulates the frequency, rate or extent of dendritic cell dendrite assembly. |
| regulation of interferon-gamma production | Any process that modulates the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon. |
| regulation of interleukin-1 beta production | Any process that modulates the frequency, rate, or extent of interleukin-1 beta production. |
| release of sequestered calcium ion into cytosol | The process in which calcium ions sequestered in the endoplasmic reticulum, Golgi apparatus or mitochondria are released into the cytosolic compartment. |
| response to lipopolysaccharide | Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria. |
| response to nitric oxide | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitric oxide stimulus. |
| response to prostaglandin E | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin E stimulus. |
| ruffle organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a ruffle, a projection at the leading edge of a crawling cell. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MDLGKPMKSV | LVVALLVIFQ | VCLCQDEVTD | DYIGDNTTVD | YTLFESLCSK | KDVRNFKAWF |
| 70 | 80 | 90 | 100 | 110 | 120 |
| LPIMYSIICF | VGLLGNGLVV | LTYIYFKRLK | TMTDTYLLNL | AVADILFLLT | LPFWAYSAAK |
| 130 | 140 | 150 | 160 | 170 | 180 |
| SWVFGVHFCK | LIFAIYKMSF | FSGMLLLLCI | SIDRYVAIVQ | AVSAHRHRAR | VLLISKLSCV |
| 190 | 200 | 210 | 220 | 230 | 240 |
| GIWILATVLS | IPELLYSDLQ | RSSSEQAMRC | SLITEHVEAF | ITIQVAQMVI | GFLVPLLAMS |
| 250 | 260 | 270 | 280 | 290 | 300 |
| FCYLVIIRTL | LQARNFERNK | AIKVIIAVVV | VFIVFQLPYN | GVVLAQTVAN | FNITSSTCEL |
| 310 | 320 | 330 | 340 | 350 | 360 |
| SKQLNIAYDV | TYSLACVRCC | VNPFLYAFIG | VKFRNDLFKL | FKDLGCLSQE | QLRQWSSCRH |
| 370 | |||||
| IRRSSMSVEA | ETTTTFSP |