P30613
Gene name |
PKLR (PK1, PKL) |
Protein name |
Pyruvate kinase PKLR |
Names |
EC 2.7.1.40 , Pyruvate kinase 1 , Pyruvate kinase isozymes L/R , R-type/L-type pyruvate kinase , Red cell/liver pyruvate kinase |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:5313 |
EC number |
2.7.1.40: Phosphotransferases with an alcohol group as acceptor |
Protein Class |
|
Descriptions
Autoinhibitory domains (AIDs)
Target domain |
86-418 (Pyruvate kinase) |
Relief mechanism |
PTM, Partner binding |
Assay |
|
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
50 structures for P30613
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 2VGB | X-ray | 273 A | A/B/C/D | 47-574 | PDB |
| 2VGF | X-ray | 275 A | A/B/C/D | 47-574 | PDB |
| 2VGG | X-ray | 274 A | A/B/C/D | 47-574 | PDB |
| 2VGI | X-ray | 287 A | A/B/C/D | 47-574 | PDB |
| 4IMA | X-ray | 195 A | A/B/C/D | 34-574 | PDB |
| 4IP7 | X-ray | 180 A | A/B/C/D | 34-574 | PDB |
| 5SC8 | X-ray | 177 A | PDB | ||
| 5SC9 | X-ray | 169 A | PDB | ||
| 5SCA | X-ray | 192 A | PDB | ||
| 5SCB | X-ray | 180 A | PDB | ||
| 5SCC | X-ray | 189 A | PDB | ||
| 5SCD | X-ray | 204 A | PDB | ||
| 5SCE | X-ray | 215 A | PDB | ||
| 5SCF | X-ray | 219 A | PDB | ||
| 5SCG | X-ray | 194 A | PDB | ||
| 5SCH | X-ray | 209 A | PDB | ||
| 5SCI | X-ray | 215 A | PDB | ||
| 5SCJ | X-ray | 235 A | PDB | ||
| 5SCK | X-ray | 172 A | PDB | ||
| 5SCL | X-ray | 213 A | PDB | ||
| 5SDT | X-ray | 194 A | PDB | ||
| 6NN4 | X-ray | 215 A | A/B/C/D | 34-574 | PDB |
| 6NN5 | X-ray | 226 A | A/B/C/D | 34-574 | PDB |
| 6NN7 | X-ray | 232 A | A/B/C/D/E/F/G/H | 34-574 | PDB |
| 6NN8 | X-ray | 242 A | A/B/C/D/E/F/G/H | 34-574 | PDB |
| 7FRV | X-ray | 200 A | PDB | ||
| 7FRW | X-ray | 174 A | PDB | ||
| 7FRX | X-ray | 185 A | PDB | ||
| 7FRY | X-ray | 196 A | PDB | ||
| 7FRZ | X-ray | 208 A | PDB | ||
| 7FS0 | X-ray | 241 A | PDB | ||
| 7FS1 | X-ray | 186 A | PDB | ||
| 7FS2 | X-ray | 237 A | PDB | ||
| 7FS3 | X-ray | 166 A | PDB | ||
| 7FS4 | X-ray | 219 A | PDB | ||
| 7FS5 | X-ray | 218 A | PDB | ||
| 7FS6 | X-ray | 224 A | PDB | ||
| 7FS7 | X-ray | 277 A | PDB | ||
| 7FS8 | X-ray | 210 A | PDB | ||
| 7FS9 | X-ray | 172 A | PDB | ||
| 7FSA | X-ray | 191 A | PDB | ||
| 7FSB | X-ray | 250 A | PDB | ||
| 7FSC | X-ray | 185 A | PDB | ||
| 7FSD | X-ray | 177 A | PDB | ||
| 7QDN | X-ray | 170 A | A/B/C/D/E/F/G/H | 30-574 | PDB |
| 7QZU | X-ray | 196 A | A/B/C/D/E/F/G/H | 30-574 | PDB |
| 8TBS | X-ray | 235 A | A/B/C/D/E/F/G/H | 50-574 | PDB |
| 8TBT | X-ray | 234 A | A/B/C/D | 50-574 | PDB |
| 8TBU | X-ray | 235 A | A/B/C/D/E/F/G/H | 50-574 | PDB |
| AF-P30613-F1 | Predicted | AlphaFoldDB |
756 variants for P30613
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs150077703 RCV001508890 RCV001096025 |
31 | A>V | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs118204087 CA115036 VAR_011435 RCV000001576 |
37 | G>E | Pyruvate kinase hyperactivity PKHYP [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
rs1484388413 VAR_058467 |
40 | R>W | PKRD [UniProt] | Yes |
UniProt dbSNP gnomAD |
|
RCV001101483 rs374805791 |
41 | R>Q | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV003137904 CA1144441 rs375189218 RCV000283593 |
41 | R>W | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
| VAR_058468 | 48 | T>del | PKRD [UniProt] | Yes | UniProt |
|
CA10608274 RCV000342304 RCV003133211 rs886045353 |
63 | A>G | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
VAR_058469 rs140571200 |
73 | L>P | PKRD [UniProt] | Yes |
ESP TOPMed gnomAD UniProt |
|
rs2148218886 RCV001729977 |
75 | L>P | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinVar Ensembl dbSNP |
| VAR_011436 | 80 | S>P | PKRD [UniProt] | Yes | UniProt |
| VAR_011437 | 86 | R>P | PKRD [UniProt] | Yes | UniProt |
|
rs1647900493 VAR_011438 |
90 | I>N | PKRD [UniProt] | Yes |
TOPMed UniProt |
|
rs750857114 VAR_011439 |
95 | G>R | PKRD [UniProt] | Yes |
ExAC TOPMed gnomAD UniProt dbSNP |
|
RCV001508887 RCV001732191 rs1433205059 |
103 | R>missing | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_004028 | 107 | M>T | PKRD [UniProt] | Yes | UniProt |
|
RCV000625798 RCV003488737 CA30904892 rs918627824 VAR_011440 |
111 | G>R | Pyruvate kinase deficiency of red cells PKRD [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
| VAR_011441 | 115 | A>P | PKRD; Val de Marne [UniProt] | Yes | UniProt |
| VAR_011442 | 120 | S>F | PKRD; Beaujon [UniProt] | Yes | UniProt |
|
VAR_011443 rs118204089 CA215081 RCV000001578 |
130 | S>Y | Pyruvate kinase deficiency of red cells PKRD; Conakry [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP |
|
RCV002487303 RCV000371504 rs886045351 RCV003137903 CA10608268 |
131 | I>missing | Pyruvate kinase deficiency of red cells Pyruvate kinase hyperactivity [ClinVar] | Yes |
ClinGen ClinVar dbSNP |
| VAR_004029 | 131 | I>del | PKRD [UniProt] | Yes | UniProt |
|
VAR_004030 rs574051756 RCV001702985 |
134 | V>D | PKRD [UniProt] | Yes |
ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
| VAR_011474 | 153 | I>T | PKRD [UniProt] | Yes | UniProt |
|
VAR_058470 rs780192373 |
154 | A>T | Variant assessed as Somatic; MODERATE impact. PKRD [NCI-TCGA, UniProt] | Yes |
UniProt ExAC NCI-TCGA TOPMed dbSNP gnomAD |
| VAR_004031 | 155 | L>P | PKRD [UniProt] | Yes | UniProt |
|
RCV001782642 VAR_011444 rs1239029841 |
159 | G>V | PKRD [UniProt] | Yes |
ClinVar UniProt dbSNP gnomAD |
|
CA215073 RCV000001571 rs118204083 RCV002512653 VAR_004033 |
163 | R>C | Pyruvate kinase deficiency of red cells PKRD; Linz [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
| VAR_058471 | 163 | R>L | PKRD [UniProt] | Yes | UniProt |
|
RCV001099492 rs1220156417 |
164 | T>N | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinVar dbSNP gnomAD |
|
rs1647527499 VAR_058472 |
165 | G>V | PKRD [UniProt] | Yes |
Ensembl UniProt |
|
RCV001099491 RCV001811652 RCV002558004 rs199824528 |
169 | G>W | Pyruvate kinase deficiency of red cells Inborn genetic diseases [ClinVar] | Yes |
ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs757359024 VAR_004032 |
172 | E>Q | PKRD; Sassari [UniProt] | Yes |
UniProt ExAC TOPMed dbSNP gnomAD |
|
VAR_011475 rs200572803 |
219 | I>T | PKRD [UniProt] | Yes |
UniProt ESP ExAC TOPMed dbSNP gnomAD |
| VAR_004034 | 221 | D>DD | PKRD [UniProt] | Yes | UniProt |
| VAR_011445 | 222 | G>A | PKRD; Katsushika [UniProt] | Yes | UniProt |
|
RCV000762858 RCV000295664 RCV000261579 CA1144229 rs201953584 |
241 | E>* | Pyruvate kinase deficiency of red cells Pyruvate kinase hyperactivity [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000374958 rs745797890 CA1144226 |
243 | G>S | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs774192277 RCV001099489 |
244 | G>D | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1253386414 VAR_011447 COSM3689036 |
263 | G>R | Variant assessed as Somatic; MODERATE impact. large_intestine PKRD [NCI-TCGA, Cosmic, UniProt] | Yes |
NCI-TCGA Cosmic cosmic curated UniProt Ensembl NCI-TCGA dbSNP |
| VAR_011448 | 263 | G>W | PKRD [UniProt] | Yes | UniProt |
|
RCV001099488 rs200695047 RCV002556015 |
269 | V>F | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
VAR_058473 RCV001812322 rs147659527 RCV001334373 |
272 | L>V | Pyruvate kinase deficiency of red cells PKRD [ClinVar, UniProt] | Yes |
ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs747549978 VAR_004035 |
275 | G>R | PKRD [UniProt] | Yes |
UniProt ExAC TOPMed dbSNP gnomAD |
|
rs754939638 RCV002295341 RCV003416372 RCV001508885 |
276 | V>missing | Pyruvate kinase deficiency of red cells PKLR-related condition [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001097711 rs147689373 RCV000946502 |
277 | E>K | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
COSM1720029 rs1647439571 VAR_004036 |
281 | D>N | NS PKRD [Cosmic, UniProt] | Yes |
cosmic curated Ensembl UniProt |
| VAR_004037 | 287 | F>V | PKRD [UniProt] | Yes | UniProt |
| VAR_011449 | 288 | V>L | PKRD; Moriguchi [UniProt] | Yes | UniProt |
|
rs1352610988 VAR_011446 |
293 | D>N | PKRD [UniProt] | Yes |
UniProt dbSNP gnomAD |
|
rs766353400 VAR_011450 |
295 | A>V | PKRD [UniProt] | Yes |
UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV003480579 rs141571402 CA1144178 RCV000369340 |
306 | H>Q | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
| VAR_011451 | 310 | I>N | PKRD; Dordrecht [UniProt] | Yes | UniProt |
|
VAR_004038 rs981505482 |
314 | I>T | PKRD; Hong Kong [UniProt] | Yes |
UniProt TOPMed dbSNP gnomAD |
|
rs2148204818 RCV002251280 |
315 | E>D | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinVar Ensembl dbSNP |
|
rs1557959063 VAR_011452 RCV000778187 |
315 | E>K | Pyruvate kinase deficiency of red cells PKRD [ClinVar, UniProt] | Yes |
ClinVar Ensembl dbSNP UniProt |
|
rs549295725 VAR_058474 |
320 | V>L | PKRD [UniProt] | Yes |
UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001097709 rs763964110 |
322 | R>S | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ExAC TOPMed gnomAD ClinVar dbSNP |
|
VAR_004039 RCV001508883 rs138476691 |
331 | D>E | PKRD; Parma [UniProt] | Yes |
ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
rs773893686 VAR_011453 |
331 | D>N | PKRD [UniProt] | Yes |
UniProt ExAC TOPMed dbSNP gnomAD |
|
rs773626254 VAR_004040 RCV000757661 |
332 | G>S | Variant assessed as Somatic; MODERATE impact. PKRD; loss of catalytical activity [NCI-TCGA, UniProt] | Yes |
ClinVar UniProt ExAC NCI-TCGA TOPMed dbSNP gnomAD |
| VAR_011476 | 335 | V>M | PKRD [UniProt] | Yes | UniProt |
| VAR_004041 | 336 | A>S | PKRD [UniProt] | Yes | UniProt |
| VAR_004042 | 337 | R>P | PKRD [UniProt] | Yes | UniProt |
|
VAR_004043 rs1167329263 |
337 | R>Q | PKRD [UniProt] | Yes |
UniProt dbSNP gnomAD |
|
rs1193689718 RCV002251079 |
339 | D>missing | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinVar dbSNP |
|
VAR_004044 rs747097960 |
339 | D>H | PKRD [UniProt] | Yes |
UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV002019914 rs747097960 RCV002250798 |
339 | D>N | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1227427396 VAR_004045 |
341 | G>A | PKRD [UniProt] | Yes |
UniProt TOPMed dbSNP gnomAD |
|
VAR_011454 rs1227427396 |
341 | G>D | PKRD [UniProt] | Yes |
TOPMed gnomAD UniProt |
| VAR_011455 | 342 | I>F | PKRD [UniProt] | Yes | UniProt |
| VAR_011456 | 348 | K>N | PKRD; Kamata [UniProt] | Yes | UniProt |
| VAR_011457 | 348 | K>del | PKRD; Brescia [UniProt] | Yes | UniProt |
|
rs1240481888 VAR_011477 |
352 | A>D | PKRD [UniProt] | Yes |
UniProt Ensembl dbSNP |
|
rs2148204121 RCV002251296 |
354 | K>R | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinVar Ensembl dbSNP |
| VAR_004046 | 354 | K>del | PKRD [UniProt] | Yes | UniProt |
|
rs752423472 RCV000768418 |
356 | M>R | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs779152555 VAR_004047 |
357 | I>T | PKRD [UniProt] | Yes |
UniProt ExAC TOPMed dbSNP gnomAD |
| VAR_058475 | 358 | G>E | PKRD [UniProt] | Yes | UniProt |
|
RCV002550747 VAR_004048 RCV001001091 rs138871700 |
359 | R>C | PKRD; Aomori [UniProt] | Yes |
ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
COSM3385236 rs1376070580 VAR_004049 |
359 | R>H | Variant assessed as Somatic; MODERATE impact. pancreas PKRD [NCI-TCGA, Cosmic, UniProt] | Yes |
NCI-TCGA Cosmic cosmic curated UniProt NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV003489862 rs765903674 VAR_004050 RCV000778186 |
361 | N>D | Pyruvate kinase deficiency of red cells PKRD [ClinVar, UniProt] | Yes |
ClinVar UniProt ExAC dbSNP gnomAD |
|
RCV001007616 RCV001811621 rs1358047518 |
361 | N>T | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinVar TOPMed dbSNP gnomAD |
|
rs763466930 RCV001097707 |
363 | A>E | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001947013 VAR_011458 rs981579065 |
364 | G>D | PKRD; Tjaereborg; unstability of the protein and decrease in catalytic activity [UniProt] | Yes |
ClinVar UniProt TOPMed dbSNP gnomAD |
| VAR_004051 | 368 | V>F | PKRD; Osaka [UniProt] | Yes | UniProt |
| VAR_058476 | 374 | L>P | PKRD [UniProt] | Yes | UniProt |
| VAR_011459 | 376 | S>I | PKRD [UniProt] | Yes | UniProt |
|
CA215075 rs74315362 VAR_004052 COSM675768 RCV000001572 |
384 | T>M | lung Pyruvate kinase deficiency of red cells Variant assessed as Somatic; MODERATE impact. endometrium PKRD; Tokyo/Beirut; no conformational change [Cosmic, ClinVar, NCI-TCGA, UniProt] | Yes |
ClinGen NCI-TCGA Cosmic cosmic curated ClinVar UniProt NCI-TCGA TOPMed dbSNP gnomAD |
| VAR_011478 | 385 | R>W | PKRD [UniProt] | Yes | UniProt |
| VAR_011460 | 387 | E>G | PKRD [UniProt] | Yes | UniProt |
|
VAR_011461 rs147034239 RCV001961352 |
390 | D>N | PKRD; Mantova; almost complete inactivation [UniProt] | Yes |
ClinVar UniProt ESP TOPMed dbSNP |
|
VAR_004053 rs1403323591 RCV001508881 |
392 | A>T | PKRD [UniProt] | Yes |
ClinVar UniProt dbSNP gnomAD |
|
VAR_004054 rs1168490341 |
393 | N>K | PKRD [UniProt] | Yes |
UniProt TOPMed dbSNP gnomAD |
|
rs776594413 RCV002246424 VAR_004055 RCV002250766 RCV001546580 |
393 | N>S | Pyruvate kinase deficiency of red cells Pyruvate kinase hyperactivity PKRD; Paris [ClinVar, UniProt] | Yes |
ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs1035640530 VAR_011462 |
394 | A>D | PKRD [UniProt] | Yes |
UniProt Ensembl dbSNP |
| VAR_011463 | 394 | A>V | PKRD [UniProt] | Yes | UniProt |
| VAR_004056 | 401 | C>CS | PKRD [UniProt] | Yes | UniProt |
|
rs779817999 RCV002251136 |
406 | G>E | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinVar ExAC TOPMed dbSNP gnomAD |
| VAR_011464 | 408 | T>A | PKRD; Hirosaki [UniProt] | Yes | UniProt |
|
VAR_004057 rs1647348099 |
408 | T>I | PKRD [UniProt] | Yes |
TOPMed UniProt |
|
COSM1287177 RCV000268968 CA1144063 rs756549612 |
417 | A>V | Pyruvate kinase deficiency of red cells Variant assessed as Somatic; MODERATE impact. autonomic_ganglia [ClinVar, NCI-TCGA, Cosmic] | Yes |
ClinGen NCI-TCGA Cosmic cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs118204084 CA215077 RCV000001573 VAR_004058 |
421 | Q>K | Pyruvate kinase deficiency of red cells PKRD; Fukushima/Maebashi/Sendai [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV003318511 VAR_004059 rs768002493 RCV002211108 |
426 | R>Q | Pyruvate kinase deficiency of red cells Variant assessed as Somatic; MODERATE impact. PKRD; Sapporo [ClinVar, NCI-TCGA, UniProt] | Yes |
ClinVar UniProt ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
VAR_004060 rs1023689443 |
426 | R>W | Variant assessed as Somatic; MODERATE impact. PKRD; Naniwa [NCI-TCGA, UniProt] | Yes |
UniProt NCI-TCGA TOPMed dbSNP gnomAD |
| VAR_011465 | 427 | E>A | PKRD [UniProt] | Yes | UniProt |
| VAR_011466 | 427 | E>D | PKRD [UniProt] | Yes | UniProt |
|
RCV002549224 VAR_004061 RCV001003791 rs762591322 |
431 | A>T | Hemolytic anemia Variant assessed as Somatic; MODERATE impact. PKRD [ClinVar, NCI-TCGA, UniProt] | Yes |
ClinVar UniProt ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs142238268 COSM1716443 RCV001095925 RCV003480954 |
435 | R>W | lung Pyruvate kinase deficiency of red cells [Cosmic, ClinVar] | Yes |
cosmic curated ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000001580 RCV001851554 rs771145576 |
440 | E>* | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinVar ExAC dbSNP gnomAD |
|
RCV001507461 rs755522396 RCV001729927 VAR_004062 |
458 | G>D | Pyruvate kinase deficiency of red cells PKRD [ClinVar, UniProt] | Yes |
ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
COSM4022995 VAR_004063 |
459 | A>V | Variant assessed as Somatic; MODERATE impact. PKRD [NCI-TCGA, UniProt] | Yes |
NCI-TCGA Cosmic UniProt |
|
CA1144023 RCV002478762 RCV001507460 RCV000490506 rs149946271 |
460 | V>A | Pyruvate kinase deficiency of red cells Pyruvate kinase hyperactivity [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs752034960 RCV001811616 VAR_004064 |
460 | V>M | PKRD [UniProt] | Yes |
ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs750540943 VAR_011479 |
468 | A>G | PKRD [UniProt] | Yes |
UniProt ExAC TOPMed dbSNP gnomAD |
| VAR_004065 | 468 | A>V | PKRD; Hadano [UniProt] | Yes | UniProt |
|
rs759466273 VAR_011467 |
477 | T>A | PKRD [UniProt] | Yes |
UniProt ExAC dbSNP |
|
VAR_011480 RCV000001574 RCV001781165 CA215078 rs118204085 |
479 | R>H | Pyruvate kinase deficiency of red cells PKRD; Amish; no conformational change [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
| VAR_011468 | 485 | S>F | PKRD [UniProt] | Yes | UniProt |
|
rs768210809 RCV003490065 COSM3965867 RCV001095924 |
486 | R>Q | Pyruvate kinase deficiency of red cells Variant assessed as Somatic; MODERATE impact. [ClinVar, NCI-TCGA] | Yes |
NCI-TCGA Cosmic ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000001577 VAR_004066 rs116100695 RCV000762857 RCV002251854 RCV000991156 CA215080 RCV000724015 |
486 | R>W | Pyruvate kinase deficiency of red cells Pyruvate kinase hyperactivity PKRD; no conformational change [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000508434 VAR_011469 rs369183199 CA1143990 RCV003133292 |
488 | R>Q | PKRD [UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001331143 rs746257586 |
490 | R>Q | Pyruvate kinase hyperactivity [ClinVar] | Yes |
ClinVar ExAC TOPMed dbSNP gnomAD |
|
VAR_004067 rs200133000 RCV000309349 CA1143989 RCV002227119 |
490 | R>W | Pyruvate kinase deficiency of red cells PKRD [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
| VAR_011470 | 495 | A>T | PKRD [UniProt] | Yes | UniProt |
|
rs141560532 VAR_004068 |
495 | A>V | PKRD [UniProt] | Yes |
UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001782643 rs551883218 VAR_004069 |
498 | R>C | PKRD [UniProt] | Yes |
ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
VAR_004070 rs758327704 RCV001782644 |
498 | R>H | PKRD [UniProt] | Yes |
ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV000714615 rs185753709 |
504 | R>H | Pyruvate kinase deficiency of red cells Variant assessed as Somatic; MODERATE impact. [ClinVar, NCI-TCGA] | Yes |
ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP |
|
VAR_011471 rs185753709 |
504 | R>L | PKRD; instability of the protein [UniProt] | Yes |
UniProt 1000Genomes ExAC TOPMed dbSNP |
|
RCV000224042 rs8177988 RCV001095923 CA1143975 VAR_018848 RCV000764981 |
506 | V>I | Pyruvate kinase deficiency of red cells Pyruvate kinase hyperactivity [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
VAR_004071 RCV000001575 rs113403872 RCV000224660 COSM675770 CA215079 RCV003421893 |
510 | R>Q | lung Pyruvate kinase deficiency of red cells PKLR-related condition PKRD [Cosmic, ClinVar, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1647233974 VAR_011472 |
511 | G>R | PKRD [UniProt] | Yes |
gnomAD UniProt |
|
rs139002629 RCV001095922 RCV002557974 |
518 | R>C | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs2148198897 RCV002251217 |
525 | W>* | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinVar Ensembl dbSNP |
|
rs1674554041 VAR_011473 COSM896870 |
531 | R>C | Variant assessed as Somatic; MODERATE impact. endometrium PKRD [NCI-TCGA, Cosmic, UniProt] | Yes |
NCI-TCGA Cosmic cosmic curated Ensembl UniProt |
|
rs1674554041 RCV001534615 |
531 | R>S | Pyruvate kinase deficiency of red cells [ClinVar] | Yes |
ClinVar Ensembl dbSNP |
|
RCV001782641 rs758278200 VAR_004072 |
532 | R>Q | PKRD [UniProt] | Yes |
ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs201255024 VAR_004073 RCV001262945 RCV003405471 RCV003135903 |
532 | R>W | Pyruvate kinase deficiency of red cells PKLR-related condition PKRD; Complete loss in the responsiveness to fructose 1,6-bisphosphate, FBP [ClinVar, UniProt] | Yes |
ClinVar UniProt ExAC dbSNP gnomAD |
|
RCV000522980 CA1143959 RCV000764980 rs201217064 |
538 | E>D | Pyruvate kinase hyperactivity [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
VAR_004074 RCV002261875 rs370316462 |
552 | V>M | PKRD [UniProt] | Yes |
ClinVar UniProt ESP dbSNP |
|
VAR_011481 RCV001810610 rs1674489086 |
557 | G>A | PKRD [UniProt] | Yes |
ClinVar Ensembl dbSNP UniProt |
| VAR_004075 | 559 | R>G | PKRD [UniProt] | Yes | UniProt |
| VAR_004076 | 566 | N>K | PKRD [UniProt] | Yes | UniProt |
|
rs61755431 RCV001811654 VAR_011482 RCV003323797 RCV001101366 |
569 | R>Q | Pyruvate kinase deficiency of red cells PKRD [ClinVar, UniProt] | Yes |
ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
| rs774176341 | 2 | S>* | No |
ExAC TOPMed gnomAD |
|
|
COSM896877 rs774176341 |
2 | S>L | Variant assessed as Somatic; MODERATE impact. endometrium [NCI-TCGA, Cosmic] | No |
NCI-TCGA Cosmic cosmic curated ExAC TOPMed gnomAD |
| rs774176341 | 2 | S>W | No |
ExAC TOPMed gnomAD |
|
| rs758112712 | 4 | Q>H | No | Ensembl | |
| rs762490269 | 7 | I>K | No |
ExAC gnomAD |
|
| rs762490269 | 7 | I>T | No |
ExAC gnomAD |
|
| TCGA novel | 8 | S>* | Variant assessed as Somatic; HIGH impact. [NCI-TCGA] | No | NCI-TCGA |
| rs1647981030 | 8 | S>P | No |
TOPMed gnomAD |
|
| rs1647980781 | 12 | L>V | No | Ensembl | |
| rs769174570 | 13 | R>Q | No |
ExAC TOPMed gnomAD |
|
| rs772818969 | 13 | R>W | No |
ExAC TOPMed gnomAD |
|
| rs750812851 | 15 | W>* | No | Ensembl | |
| rs748703432 | 15 | W>R | No |
ExAC TOPMed gnomAD |
|
| rs1442131020 | 17 | S>C | No |
TOPMed gnomAD |
|
|
rs1442131020 COSM163518 |
17 | S>F | Variant assessed as Somatic; MODERATE impact. breast [NCI-TCGA, Cosmic] | No |
NCI-TCGA Cosmic cosmic curated NCI-TCGA TOPMed gnomAD |
| rs1442131020 | 17 | S>Y | No |
TOPMed gnomAD |
|
| rs781610938 | 18 | K>E | No |
ExAC gnomAD |
|
| rs769038526 | 19 | S>C | No |
ExAC gnomAD |
|
| rs769038526 | 19 | S>Y | No |
ExAC gnomAD |
|
| rs200357340 | 20 | Q>R | No |
TOPMed gnomAD |
|
| rs1278895712 | 21 | R>K | No |
TOPMed gnomAD |
|
| rs1201759277 | 22 | D>N | No | gnomAD | |
| rs1647979024 | 22 | D>V | No | Ensembl | |
| rs1553231692 | 23 | L>I | No | TOPMed | |
| COSM6121467 | 24 | A>E | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs754783713 | 24 | A>T | No | TOPMed | |
| rs1394682499 | 24 | A>V | No |
TOPMed gnomAD |
|
| rs1647978536 | 25 | K>E | No | TOPMed | |
| rs747323509 | 26 | S>C | No |
ExAC gnomAD |
|
| rs1647978191 | 27 | I>V | No | Ensembl | |
| rs780370877 | 28 | L>P | No |
ExAC gnomAD |
|
|
rs142735355 RCV001813036 |
29 | I>T | No |
ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
| rs1647977935 | 29 | I>V | No | Ensembl | |
| rs771523060 | 30 | G>E | No | Ensembl | |
| rs150077703 | 31 | A>D | No |
ESP ExAC TOPMed gnomAD |
|
| rs1446138836 | 31 | A>P | No |
TOPMed gnomAD |
|
| rs1446138836 | 31 | A>T | No |
TOPMed gnomAD |
|
| rs1647977007 | 33 | G>R | No |
TOPMed gnomAD |
|
| rs1173752341 | 35 | P>S | No | gnomAD | |
| rs770019694 | 36 | A>G | No |
ExAC TOPMed gnomAD |
|
| rs770019694 | 36 | A>V | No |
ExAC TOPMed gnomAD |
|
| rs118204087 | 37 | G>V | No |
ExAC gnomAD |
|
| rs745811076 | 40 | R>L | No |
ExAC TOPMed gnomAD |
|
| rs745811076 | 40 | R>P | No |
ExAC TOPMed gnomAD |
|
| rs745811076 | 40 | R>Q | No |
ExAC TOPMed gnomAD |
|
| rs374805791 | 41 | R>L | No |
1000Genomes ExAC TOPMed gnomAD |
|
| rs1553231550 | 42 | A>G | No | Ensembl | |
| COSM4818974 | 43 | S>T | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs753415917 | 44 | V>E | No | Ensembl | |
| rs924210755 | 44 | V>M | No | gnomAD | |
| rs1305717947 | 46 | Q>K | No | gnomAD | |
| rs1380918810 | 49 | Q>* | No | gnomAD | |
| rs1647912559 | 49 | Q>H | No | TOPMed | |
|
COSM529302 rs752199380 |
50 | E>K | lung [Cosmic] | No |
cosmic curated ExAC gnomAD |
| rs1185596611 | 51 | L>P | No | TOPMed | |
| rs760029571 | 52 | G>C | No |
ExAC gnomAD |
|
| rs752093404 | 52 | G>D | No |
ExAC gnomAD |
|
| rs760443294 | 53 | T>S | No | Ensembl | |
| rs1553231530 | 53 | T>S | No | Ensembl | |
| rs753089348 | 54 | A>T | No | Ensembl | |
| rs1374868491 | 54 | A>V | No | Ensembl | |
| rs746308116 | 56 | F>Y | No | Ensembl | |
|
rs772567442 RCV001000991 |
57 | Q>* | No |
ClinVar TOPMed dbSNP |
|
|
RCV002261901 rs1165604977 |
63 | A>T | No |
ClinVar TOPMed dbSNP gnomAD |
|
| rs773589949 | 65 | M>L | No |
ExAC TOPMed gnomAD |
|
| rs1187424402 | 65 | M>T | No |
TOPMed gnomAD |
|
| rs773589949 | 65 | M>V | No |
ExAC TOPMed gnomAD |
|
| rs1647908455 | 68 | T>N | No | TOPMed | |
| rs754696137 | 71 | E>V | No | Ensembl | |
|
rs200791251 RCV001508889 |
73 | L>F | No |
ClinVar ExAC dbSNP gnomAD |
|
| rs140571200 | 73 | L>H | No |
ESP TOPMed gnomAD |
|
| rs1394809863 | 74 | C>S | No |
TOPMed gnomAD |
|
| rs1331269086 | 76 | L>P | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
Ensembl NCI-TCGA |
| rs766051969 | 80 | S>T | No | Ensembl | |
| rs139707114 | 81 | E>K | No |
ESP ExAC TOPMed gnomAD |
|
| rs151005140 | 82 | P>A | No |
ESP ExAC TOPMed gnomAD |
|
| rs1291071651 | 82 | P>L | No | gnomAD | |
| rs754785851 | 83 | V>A | No | Ensembl | |
| rs368492204 | 83 | V>M | No |
ESP ExAC TOPMed gnomAD |
|
| rs1273516896 | 85 | A>T | No | gnomAD | |
| rs752391774 | 86 | R>C | No |
ExAC TOPMed gnomAD |
|
|
rs752391774 RCV001508888 |
86 | R>G | No |
ClinVar ExAC TOPMed dbSNP gnomAD |
|
| rs375471342 | 86 | R>H | No |
ESP ExAC TOPMed gnomAD |
|
| rs754454017 | 87 | S>C | No |
ExAC TOPMed gnomAD |
|
| rs754454017 | 87 | S>G | No |
ExAC TOPMed gnomAD |
|
| rs1553231499 | 88 | T>S | No | Ensembl | |
|
rs752037743 RCV002005495 |
91 | I>T | No |
ClinVar ExAC dbSNP gnomAD |
|
| rs750857114 | 95 | G>W | No |
ExAC TOPMed gnomAD |
|
| rs1474390898 | 96 | P>S | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
NCI-TCGA TOPMed gnomAD |
|
RCV002003104 rs1302535902 |
98 | S>T | No |
ClinVar TOPMed dbSNP gnomAD |
|
| rs148636159 | 99 | R>C | No |
ESP ExAC gnomAD |
|
| rs534895384 | 99 | R>H | No |
1000Genomes ExAC gnomAD |
|
| rs762661462 | 100 | S>T | No |
ExAC gnomAD |
|
|
RCV001001145 rs1572057758 |
101 | V>A | No |
ClinVar Ensembl dbSNP |
|
| rs143984223 | 101 | V>L | No |
ESP ExAC TOPMed gnomAD |
|
| rs143984223 | 101 | V>M | No |
ESP ExAC TOPMed gnomAD |
|
| rs1647552348 | 102 | E>G | No | TOPMed | |
| TCGA novel | 102 | E>K | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs779765565 COSM347143 |
103 | R>C | lung [Cosmic] | No |
cosmic curated ExAC TOPMed gnomAD |
| rs779765565 | 103 | R>G | No |
ExAC TOPMed gnomAD |
|
| rs371471086 | 103 | R>H | No | ESP | |
|
COSM3976195 rs779765565 |
103 | R>S | lung [Cosmic] | No |
cosmic curated ExAC TOPMed gnomAD |
| rs1647551634 | 105 | K>R | No | TOPMed | |
| rs1647551316 | 106 | E>Q | No | gnomAD | |
| rs1647550981 | 107 | M>I | No |
TOPMed gnomAD |
|
| rs1647550818 | 108 | I>V | No |
TOPMed gnomAD |
|
| rs1159724535 | 109 | K>E | No | gnomAD | |
| rs1553230926 | 110 | A>D | No | Ensembl | |
| TCGA novel | 110 | A>P | Variant assessed as Somatic; HIGH impact. [NCI-TCGA] | No | NCI-TCGA |
| rs1557960823 | 110 | A>T | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
Ensembl NCI-TCGA |
| COSM3418118 | 110 | A>V | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs1325130058 | 111 | G>E | No |
TOPMed gnomAD |
|
|
COSM3474939 rs1553230922 |
112 | M>I | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
NCI-TCGA Cosmic Ensembl NCI-TCGA |
| rs746377052 | 112 | M>L | No |
ExAC TOPMed gnomAD |
|
| rs746377052 | 112 | M>V | No |
ExAC TOPMed gnomAD |
|
| rs1347580980 | 113 | N>S | No | TOPMed | |
|
RCV001813027 rs779517988 |
114 | I>T | No |
ClinVar ExAC dbSNP gnomAD |
|
|
rs971962553 COSM1334629 |
116 | R>* | Variant assessed as Somatic; HIGH impact. large_intestine [NCI-TCGA, Cosmic] | No |
NCI-TCGA Cosmic cosmic curated NCI-TCGA TOPMed |
| rs754441130 | 116 | R>L | No |
ExAC gnomAD |
|
| rs754441130 | 116 | R>Q | No |
ExAC gnomAD |
|
| rs754282523 | 117 | L>R | No |
ExAC gnomAD |
|
| rs1489078045 | 118 | N>S | No | TOPMed | |
| rs1553230917 | 119 | F>V | No | Ensembl | |
| rs1572057652 | 121 | H>Q | No | Ensembl | |
| rs1647545745 | 122 | G>S | No | TOPMed | |
| rs756428691 | 123 | S>C | No |
ExAC gnomAD |
|
| rs1240858486 | 124 | H>Q | No |
TOPMed gnomAD |
|
| rs767598564 | 125 | E>A | No |
ExAC TOPMed gnomAD |
|
| rs1260433542 | 125 | E>D | No | TOPMed | |
| rs752905261 | 125 | E>Q | No |
ExAC gnomAD |
|
| TCGA novel | 126 | Y>C | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1572057427 RCV001002644 |
127 | H>D | No |
ClinVar Ensembl dbSNP |
|
|
rs1572057410 RCV001002382 |
127 | H>R | No |
ClinVar Ensembl dbSNP |
|
| rs773981429 | 129 | E>K | No |
ExAC TOPMed gnomAD |
|
| rs1647536192 | 132 | A>T | No | gnomAD | |
| rs770337533 | 133 | N>I | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ExAC NCI-TCGA gnomAD |
| rs749817706 | 133 | N>K | No |
ExAC TOPMed gnomAD |
|
| rs770175821 | 135 | R>W | No |
ExAC TOPMed gnomAD |
|
| rs1452107518 | 137 | A>T | No | gnomAD | |
| rs1275173660 | 137 | A>V | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
NCI-TCGA gnomAD |
| rs1647534720 | 138 | V>L | No | TOPMed | |
| rs748560715 | 139 | E>K | No |
ExAC TOPMed gnomAD |
|
| rs757997111 | 139 | E>V | No | Ensembl | |
| rs781504670 | 140 | S>R | No |
ExAC gnomAD |
|
| rs1553230882 | 141 | F>L | No | Ensembl | |
| rs1647533800 | 141 | F>S | No | Ensembl | |
| rs1647533662 | 142 | A>P | No | Ensembl | |
| rs2148207982 | 143 | G>R | No | Ensembl | |
| rs1647533510 | 144 | S>C | No | TOPMed | |
| rs1553230879 | 145 | P>L | No | Ensembl | |
| rs1360239034 | 147 | S>C | No | gnomAD | |
| rs1269961789 | 147 | S>T | No | gnomAD | |
| rs757378318 | 149 | R>Q | No | Ensembl | |
| rs1437892556 | 149 | R>W | No | gnomAD | |
| rs1327358866 | 150 | P>S | No |
TOPMed gnomAD |
|
| rs1393285415 | 151 | V>L | No | gnomAD | |
| rs1393285415 | 151 | V>M | No | gnomAD | |
| rs751716279 | 152 | A>G | No |
ExAC gnomAD |
|
| rs1417213156 | 153 | I>V | No | gnomAD | |
| rs780192373 | 154 | A>P | No |
ExAC TOPMed gnomAD |
|
| rs1647530315 | 156 | D>G | No | gnomAD | |
| rs1647530478 | 156 | D>H | No | Ensembl | |
| rs1647530478 | 156 | D>Y | No | Ensembl | |
| rs753840260 | 157 | T>A | No |
ExAC TOPMed gnomAD |
|
| rs753840260 | 157 | T>P | No |
ExAC TOPMed gnomAD |
|
| COSM3802107 | 158 | K>Q | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs1009060425 | 158 | K>R | No | Ensembl | |
|
COSM4023001 rs1206958691 |
160 | P>L | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
NCI-TCGA Cosmic NCI-TCGA TOPMed gnomAD |
|
COSM3802106 rs1272792336 |
161 | E>D | breast Variant assessed as Somatic; MODERATE impact. [Cosmic, NCI-TCGA] | No |
cosmic curated gnomAD NCI-TCGA Cosmic |
| rs2148207813 | 162 | I>F | No | Ensembl | |
| rs1647528158 | 162 | I>M | No | Ensembl | |
| rs1553230854 | 162 | I>N | No | Ensembl | |
| rs1553230854 | 162 | I>T | No | Ensembl | |
|
COSM1334627 rs1220156417 |
164 | T>I | Variant assessed as Somatic; MODERATE impact. large_intestine [NCI-TCGA, Cosmic] | No |
NCI-TCGA Cosmic cosmic curated NCI-TCGA gnomAD |
| rs929087559 | 166 | I>T | No | Ensembl | |
| rs759323460 | 167 | L>P | No |
ExAC gnomAD |
|
| rs1647526577 | 168 | Q>E | No | Ensembl | |
| rs762330662 | 169 | G>A | No |
ExAC TOPMed gnomAD |
|
| rs762330662 | 169 | G>E | No |
ExAC TOPMed gnomAD |
|
| rs199824528 | 169 | G>R | No |
1000Genomes ESP ExAC TOPMed gnomAD |
|
| rs779196057 | 170 | G>S | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ExAC NCI-TCGA TOPMed gnomAD |
| rs956505039 | 172 | E>G | No |
TOPMed gnomAD |
|
| rs757359024 | 172 | E>K | No |
ExAC TOPMed gnomAD |
|
| rs2148207268 | 174 | E>D | No | Ensembl | |
| rs781236222 | 175 | V>A | No |
ExAC gnomAD |
|
| rs370513342 | 175 | V>M | No |
ESP ExAC TOPMed gnomAD |
|
| rs138482544 | 177 | L>M | No |
ESP ExAC TOPMed gnomAD |
|
| COSM3862914 | 178 | V>G | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs751361992 | 178 | V>M | No |
ExAC gnomAD |
|
| rs1362487132 | 180 | G>D | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
NCI-TCGA TOPMed gnomAD |
| rs1362487132 | 180 | G>V | No |
TOPMed gnomAD |
|
| rs1553230808 | 181 | S>P | No | Ensembl | |
| rs993639560 | 182 | Q>H | No |
TOPMed gnomAD |
|
| rs1647505031 | 183 | V>A | No | TOPMed | |
| rs1478312403 | 185 | V>L | No |
TOPMed gnomAD |
|
| rs1478312403 | 185 | V>M | No |
TOPMed gnomAD |
|
| rs370932346 | 187 | V>A | No |
ESP ExAC TOPMed gnomAD |
|
| rs1264493201 | 187 | V>M | No | gnomAD | |
| rs758042780 | 188 | D>N | No |
ExAC TOPMed gnomAD |
|
| rs758042780 | 188 | D>Y | No |
ExAC TOPMed gnomAD |
|
| rs577247981 | 189 | P>A | No |
1000Genomes ExAC TOPMed gnomAD |
|
| rs1213745985 | 190 | A>P | No | gnomAD | |
| rs1336522710 | 190 | A>V | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
NCI-TCGA gnomAD |
| COSM1334626 | 191 | F>I | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs1217960562 | 191 | F>Y | No | TOPMed | |
| rs1485617455 | 192 | R>Q | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
NCI-TCGA TOPMed gnomAD |
| rs1242775292 | 192 | R>W | No |
TOPMed gnomAD |
|
|
COSM4023000 rs1270838814 |
193 | T>M | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
NCI-TCGA Cosmic NCI-TCGA gnomAD |
| rs552916457 | 194 | R>L | No |
1000Genomes ExAC gnomAD |
|
| COSM4714799 | 194 | R>W | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs781165565 | 196 | N>D | No | Ensembl | |
| rs764631858 | 196 | N>K | No |
ExAC TOPMed gnomAD |
|
| TCGA novel | 196 | N>T | Variant assessed as Somatic; HIGH impact. [NCI-TCGA] | No | NCI-TCGA |
| rs761210207 | 197 | A>V | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ExAC NCI-TCGA gnomAD |
| rs775787566 | 198 | N>K | No |
ExAC TOPMed gnomAD |
|
| rs898938497 | 198 | N>S | No | Ensembl | |
| rs1463112401 | 199 | T>N | No | gnomAD | |
| TCGA novel | 200 | V>M | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
| rs772473652 | 201 | W>* | No |
ExAC TOPMed gnomAD |
|
| rs1647499374 | 201 | W>C | No | TOPMed | |
| rs772473652 | 201 | W>L | No |
ExAC TOPMed gnomAD |
|
| COSM4022999 | 202 | V>M | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs1647498854 | 205 | P>R | No | TOPMed | |
| rs1216054637 | 205 | P>S | No | gnomAD | |
| rs759694655 | 206 | N>S | No |
ExAC gnomAD |
|
| rs780259014 | 207 | I>S | No | Ensembl | |
| rs1647497802 | 208 | V>L | No | Ensembl | |
| rs200480300 | 209 | R>Q | No |
1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 209 | R>W | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
| rs777980472 | 211 | V>L | No |
ExAC TOPMed gnomAD |
|
| rs777980472 | 211 | V>M | No |
ExAC TOPMed gnomAD |
|
| rs777667459 | 212 | P>L | No |
ExAC gnomAD |
|
| rs768541145 | 212 | P>S | No |
ExAC TOPMed gnomAD |
|
|
rs200979497 RCV001508886 |
213 | V>A | No |
ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
| rs1303985650 | 214 | G>R | No | gnomAD | |
| COSM2210460 | 215 | G>A | Variant assessed as Somatic; HIGH impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs1052308239 | 215 | G>A | No |
TOPMed gnomAD |
|
| rs1647494546 | 215 | G>C | No | gnomAD | |
| rs1052308239 | 215 | G>D | No |
TOPMed gnomAD |
|
| COSM4022998 | 216 | R>H | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs926099988 | 216 | R>L | No | Ensembl | |
| rs756878847 | 217 | I>L | No |
ExAC gnomAD |
|
| rs1325293184 | 218 | Y>H | No | gnomAD | |
| rs753384013 | 219 | I>F | No |
ExAC gnomAD |
|
| rs753384013 | 219 | I>V | No |
ExAC gnomAD |
|
| rs1316380783 | 221 | D>H | No |
TOPMed gnomAD |
|
| rs1647492142 | 222 | G>R | No | TOPMed | |
| rs1396216541 | 222 | G>V | No | gnomAD | |
| rs768657605 | 224 | I>N | No | Ensembl | |
| rs768657605 | 224 | I>T | No | Ensembl | |
| rs767781894 | 225 | S>F | No |
ExAC TOPMed gnomAD |
|
| COSM1334624 | 226 | L>I | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs774736844 | 227 | V>E | No |
ExAC gnomAD |
|
| rs771329959 | 228 | V>I | No |
ExAC gnomAD |
|
| rs1647485350 | 229 | Q>E | No | Ensembl | |
| rs763237413 | 229 | Q>R | No |
ExAC gnomAD |
|
| rs1647484906 | 231 | I>T | No | Ensembl | |
| rs764375399 | 231 | I>V | No | Ensembl | |
| rs750606318 | 232 | G>C | No |
TOPMed gnomAD |
|
| rs1402934561 | 232 | G>D | No | gnomAD | |
| rs1175303714 | 233 | P>L | No |
TOPMed gnomAD |
|
| rs1386589533 | 233 | P>S | No |
TOPMed gnomAD |
|
| rs1386589533 | 233 | P>T | No |
TOPMed gnomAD |
|
| rs892370971 | 235 | G>E | No | gnomAD | |
| rs892370971 | 235 | G>V | No | gnomAD | |
| rs769475930 | 236 | L>P | No | Ensembl | |
| TCGA novel | 237 | V>A | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
| rs1647459349 | 237 | V>M | No | TOPMed | |
| rs1301549572 | 238 | T>P | No | gnomAD | |
| rs776546824 | 241 | E>V | No |
ExAC TOPMed gnomAD |
|
| rs1193894766 | 242 | N>T | No | gnomAD | |
| rs1208131291 | 243 | G>D | No | gnomAD | |
| rs1208131291 | 243 | G>V | No | gnomAD | |
| rs759517847 | 244 | G>S | No |
TOPMed gnomAD |
|
| rs555712170 | 245 | V>I | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
| rs1443489252 | 247 | G>D | No | TOPMed | |
| rs1433553552 | 247 | G>S | No | gnomAD | |
| rs368830326 | 249 | R>Q | No |
ESP ExAC TOPMed gnomAD |
|
| rs748947397 | 249 | R>W | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ExAC NCI-TCGA TOPMed gnomAD |
| rs267598065 | 251 | G>C | No | gnomAD | |
|
COSM36782 rs267598065 |
251 | G>S | skin [Cosmic] | No |
cosmic curated gnomAD |
| rs1647454047 | 252 | V>M | No | Ensembl | |
| rs1647453746 | 253 | N>Y | No | TOPMed | |
|
rs943436402 RCV001810820 |
254 | L>F | No |
ClinVar Ensembl dbSNP |
|
| rs1647453288 | 255 | P>Q | No | Ensembl | |
| rs1647452916 | 256 | G>E | No | Ensembl | |
| TCGA novel | 257 | A>P | Variant assessed as Somatic; HIGH impact. [NCI-TCGA] | No | NCI-TCGA |
| rs752053420 | 257 | A>S | No |
ExAC TOPMed gnomAD |
|
| rs752053420 | 257 | A>T | No |
ExAC TOPMed gnomAD |
|
| rs766853199 | 257 | A>V | No |
ExAC TOPMed gnomAD |
|
| rs750161685 | 259 | V>L | No | gnomAD | |
| rs750161685 | 259 | V>M | No | gnomAD | |
| rs765541284 | 260 | D>E | No |
ExAC gnomAD |
|
| rs140575553 | 260 | D>H | No |
1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM3474938 rs140575553 |
260 | D>N | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
NCI-TCGA Cosmic 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
COSM3979868 rs761905811 |
261 | L>F | ovary [Cosmic] | No |
cosmic curated ExAC TOPMed gnomAD |
| rs1186641890 | 261 | L>W | No | gnomAD | |
| rs1463495893 | 262 | P>L | No |
TOPMed gnomAD |
|
| rs867384868 | 263 | G>A | No | gnomAD | |
|
rs867384868 COSM3474937 |
263 | G>E | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
NCI-TCGA Cosmic NCI-TCGA gnomAD |
| rs769783555 | 265 | S>C | No | Ensembl | |
| rs1438320407 | 266 | E>G | No | gnomAD | |
| rs1196986764 | 266 | E>Q | No |
TOPMed gnomAD |
|
|
rs764143249 RCV000994123 |
267 | Q>* | No |
ClinVar ExAC dbSNP gnomAD |
|
| rs764143249 | 267 | Q>K | No |
ExAC gnomAD |
|
| rs576755609 | 268 | D>E | No |
1000Genomes ExAC TOPMed gnomAD |
|
| rs770747923 | 269 | V>A | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ExAC NCI-TCGA TOPMed gnomAD |
| rs770747923 | 269 | V>D | No |
ExAC TOPMed gnomAD |
|
| COSM2154835 | 269 | V>I | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs772860949 | 270 | R>* | No |
ExAC TOPMed gnomAD |
|
| rs772860949 | 270 | R>G | No |
ExAC TOPMed gnomAD |
|
| rs1647446710 | 270 | R>L | No | Ensembl | |
|
RCV001776810 rs1454650109 |
271 | D>Y | No |
ClinVar dbSNP gnomAD |
|
| rs1647446208 | 272 | L>P | No | gnomAD | |
| rs747753310 | 273 | R>C | No |
ExAC gnomAD |
|
| rs141393570 | 273 | R>H | No |
1000Genomes ESP ExAC TOPMed gnomAD |
|
| rs141393570 | 273 | R>P | No |
1000Genomes ESP ExAC TOPMed gnomAD |
|
| COSM6058329 | 275 | G>A | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs1553230589 | 276 | V>E | No | Ensembl | |
| rs780659178 | 276 | V>M | No |
ExAC TOPMed gnomAD |
|
| rs1298683548 | 278 | H>R | No |
TOPMed gnomAD |
|
| rs1350652440 | 278 | H>Y | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
NCI-TCGA gnomAD |
| rs758560647 | 279 | G>E | No |
ExAC TOPMed gnomAD |
|
| rs1337184181 | 279 | G>R | No |
TOPMed gnomAD |
|
| rs758560647 | 279 | G>V | No |
ExAC TOPMed gnomAD |
|
| rs1647439746 | 280 | V>G | No | TOPMed | |
| rs1647439956 | 280 | V>M | No | TOPMed | |
| TCGA novel | 280 | V>W | Variant assessed as Somatic; HIGH impact. [NCI-TCGA] | No | NCI-TCGA |
| rs972319705 | 282 | I>M | No | TOPMed | |
| rs1647438800 | 283 | V>D | No | gnomAD | |
| rs1557959233 | 283 | V>L | No | Ensembl | |
| COSM72194 | 289 | R>L | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
|
rs749666187 COSM1334622 |
289 | R>Q | large_intestine [Cosmic] | No |
cosmic curated ExAC gnomAD |
| TCGA novel | 289 | R>W | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
| rs780875123 | 290 | K>R | No | Ensembl | |
| TCGA novel | 291 | A>P | Variant assessed as Somatic; HIGH impact. [NCI-TCGA] | No | NCI-TCGA |
| rs749573131 | 292 | S>C | No | TOPMed | |
| rs749573131 | 292 | S>G | No | TOPMed | |
| rs2148205075 | 292 | S>N | No | Ensembl | |
| rs1215189514 | 292 | S>R | No |
TOPMed gnomAD |
|
| rs1352610988 | 293 | D>H | No | gnomAD | |
| rs760709075 | 294 | V>L | No |
ExAC TOPMed gnomAD |
|
| rs751524706 | 295 | A>T | No |
ExAC TOPMed gnomAD |
|
| rs1171887541 | 296 | A>D | No | gnomAD | |
|
COSM896874 rs148435198 |
297 | V>I | Variant assessed as Somatic; MODERATE impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
NCI-TCGA Cosmic cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
| rs148435198 | 297 | V>L | No |
ESP ExAC TOPMed gnomAD |
|
| rs769464933 | 299 | A>D | No |
ExAC TOPMed gnomAD |
|
| COSM6121469 | 301 | L>P | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs1468795405 | 301 | L>V | No |
TOPMed gnomAD |
|
| rs1273785008 | 302 | G>A | No |
TOPMed gnomAD |
|
| rs201979697 | 303 | P>A | No |
1000Genomes ExAC TOPMed gnomAD |
|
| rs746566827 | 303 | P>L | No |
ExAC TOPMed gnomAD |
|
| rs746566827 | 303 | P>Q | No |
ExAC TOPMed gnomAD |
|
| rs201979697 | 303 | P>S | No |
1000Genomes ExAC TOPMed gnomAD |
|
| rs2148204914 | 305 | G>A | No | Ensembl | |
|
rs2148204914 COSM3474936 |
305 | G>E | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
NCI-TCGA Cosmic Ensembl |
|
TCGA novel rs2148204923 |
305 | G>R | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
NCI-TCGA Ensembl |
| rs1647433617 | 306 | H>R | No | TOPMed | |
| rs373990660 | 307 | G>R | No |
ESP ExAC TOPMed gnomAD |
|
| rs373990660 | 307 | G>S | No |
ESP ExAC TOPMed gnomAD |
|
|
RCV002003743 rs754124936 |
307 | G>V | No |
ClinVar ExAC dbSNP gnomAD |
|
| rs1647432625 | 310 | I>M | No |
TOPMed gnomAD |
|
| rs1557959092 | 312 | S>G | No | Ensembl | |
| rs1460894843 | 312 | S>R | No | gnomAD | |
| rs777926506 | 313 | K>Q | No |
ExAC gnomAD |
|
| rs1348220831 | 313 | K>R | No | gnomAD | |
| rs1647431022 | 316 | N>D | No |
TOPMed gnomAD |
|
| rs745663677 | 317 | H>Q | No |
ExAC gnomAD |
|
| rs767580478 | 318 | E>G | No |
ExAC gnomAD |
|
| COSM3474935 | 318 | E>K | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
|
RCV001508884 rs2148204773 |
319 | G>* | No |
ClinVar dbSNP |
|
| rs763006858 | 319 | G>D | No |
ExAC gnomAD |
|
| rs1171765666 | 319 | G>S | No | gnomAD | |
| rs1399195622 | 322 | R>M | No | gnomAD | |
| rs8177974 | 324 | D>E | No |
1000Genomes ExAC TOPMed gnomAD |
|
| rs760413736 | 324 | D>G | No |
ExAC TOPMed gnomAD |
|
| COSM6121470 | 324 | D>H | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| COSM414003 | 324 | D>N | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs1557958902 | 326 | I>N | No | Ensembl | |
| rs758924903 | 327 | L>P | No |
ExAC gnomAD |
|
| rs758924903 | 327 | L>Q | No |
ExAC gnomAD |
|
| rs767088632 | 327 | L>V | No |
ExAC TOPMed gnomAD |
|
| rs2148204412 | 328 | E>Q | No | Ensembl | |
| rs1443439423 | 331 | D>G | No | gnomAD | |
| rs773626254 | 332 | G>C | No |
ExAC TOPMed gnomAD |
|
| COSM3474934 | 332 | G>D | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs1647418569 | 333 | I>V | No | TOPMed | |
| rs756339496 | 334 | M>I | No | Ensembl | |
| rs1462758901 | 334 | M>T | No | gnomAD | |
| COSM896873 | 336 | A>T | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs748376799 | 337 | R>G | No | ExAC | |
| rs748376799 | 337 | R>W | No | ExAC | |
| COSM1334620 | 339 | D>T | Variant assessed as Somatic; HIGH impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
|
RCV002211109 rs747097960 |
339 | D>Y | No |
ClinVar ExAC TOPMed dbSNP gnomAD |
|
| rs781715321 | 343 | E>K | No | gnomAD | |
| rs781715321 | 343 | E>Q | No | gnomAD | |
| TCGA novel | 344 | I>S | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
| rs1647415148 | 346 | A>P | No | Ensembl | |
| rs1647415148 | 346 | A>T | No | Ensembl | |
| rs2148204187 | 347 | E>V | No | Ensembl | |
| rs1647414487 | 349 | V>I | No | Ensembl | |
|
RCV001812972 rs755934816 |
350 | F>S | No |
ClinVar ExAC TOPMed dbSNP |
|
| rs755934816 | 350 | F>Y | No |
ExAC TOPMed |
|
| rs1553230470 | 351 | L>Q | No | Ensembl | |
| rs1341339479 | 351 | L>V | No |
TOPMed gnomAD |
|
| COSM675767 | 353 | Q>H | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs1482347822 | 355 | M>V | No |
TOPMed gnomAD |
|
| rs752423472 | 356 | M>T | No |
ExAC TOPMed gnomAD |
|
| rs779152555 | 357 | I>N | No |
ExAC TOPMed gnomAD |
|
| rs1557958688 | 357 | I>V | No | Ensembl | |
| rs1647411252 | 358 | G>R | No | Ensembl | |
| rs1572054918 | 360 | C>G | No | Ensembl | |
| rs773803500 | 360 | C>S | No |
ExAC TOPMed gnomAD |
|
|
rs773803500 RCV001091727 |
360 | C>Y | No |
ClinVar ExAC TOPMed dbSNP gnomAD |
|
| rs763466930 | 363 | A>V | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ExAC NCI-TCGA TOPMed gnomAD |
|
RCV001867837 rs1434008042 |
365 | K>missing | No |
ClinVar dbSNP |
|
| rs980930459 | 365 | K>N | No | gnomAD | |
| rs533316562 | 366 | P>A | No |
1000Genomes ExAC gnomAD |
|
| rs533316562 | 366 | P>S | No |
1000Genomes ExAC gnomAD |
|
| rs777020292 | 367 | V>F | No |
ExAC gnomAD |
|
| rs777020292 | 367 | V>I | No |
ExAC gnomAD |
|
| rs1482703790 | 372 | Q>* | No | gnomAD | |
| COSM3474930 | 375 | E>K | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| COSM3474929 | 377 | M>I | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs758011557 | 381 | P>L | No |
ExAC TOPMed gnomAD |
|
| rs1385862868 | 381 | P>S | No | TOPMed | |
| rs952129836 | 382 | R>Q | No |
TOPMed gnomAD |
|
| rs140964046 | 382 | R>W | No |
ESP ExAC TOPMed gnomAD |
|
| rs767333188 | 383 | P>A | No |
ExAC TOPMed gnomAD |
|
| rs767333188 | 383 | P>S | No |
ExAC TOPMed gnomAD |
|
| rs74315362 | 384 | T>R | No |
TOPMed gnomAD |
|
| rs1553230279 | 385 | R>G | No | Ensembl | |
|
rs147089210 COSM109670 |
387 | E>K | skin [Cosmic] | No |
cosmic curated Ensembl |
| rs548802413 | 389 | S>N | No | gnomAD | |
| rs772465237 | 389 | S>R | No |
ExAC TOPMed gnomAD |
|
| rs759834904 | 390 | D>G | No |
ExAC gnomAD |
|
| rs771080781 | 391 | V>A | No |
ExAC gnomAD |
|
| rs1647353051 | 394 | A>S | No | TOPMed | |
|
RCV001812548 rs1647353051 |
394 | A>T | No |
ClinVar TOPMed dbSNP |
|
| rs1451219602 | 395 | V>M | No | gnomAD | |
| rs1553230251 | 397 | D>E | No | Ensembl | |
| rs1647352222 | 398 | G>E | No | TOPMed | |
| rs1553230244 | 399 | A>T | No | Ensembl | |
| TCGA novel | 401 | C>* | Variant assessed as Somatic; HIGH impact. [NCI-TCGA] | No | NCI-TCGA |
| rs1553230243 | 401 | C>S | No | Ensembl | |
| rs766913459 | 401 | C>Y | No | Ensembl | |
| TCGA novel | 402 | I>F | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
| rs1407665319 | 402 | I>T | No |
TOPMed gnomAD |
|
| rs902651473 | 402 | I>V | No |
TOPMed gnomAD |
|
| rs368784290 | 403 | M>I | No |
ESP ExAC TOPMed gnomAD |
|
| rs768361068 | 403 | M>T | No |
ExAC gnomAD |
|
| rs1647351264 | 403 | M>V | No | TOPMed | |
| rs779817999 | 406 | G>A | No |
ExAC TOPMed gnomAD |
|
| rs375456388 | 406 | G>R | No |
ESP TOPMed |
|
| rs375456388 | 406 | G>W | No |
ESP TOPMed |
|
|
rs866472917 RCV001811789 |
407 | E>K | No |
ClinVar TOPMed dbSNP |
|
| rs866472917 | 407 | E>Q | No | TOPMed | |
| rs780985369 | 407 | E>V | No | Ensembl | |
| rs745461639 | 411 | G>A | No |
ExAC gnomAD |
|
| rs745461639 | 411 | G>D | No |
ExAC gnomAD |
|
| rs756750467 | 412 | N>K | No |
ExAC TOPMed gnomAD |
|
|
rs774006353 RCV001508880 |
412 | N>T | No |
ClinVar ExAC TOPMed dbSNP gnomAD |
|
| rs1397695525 | 413 | F>L | No | Ensembl | |
| rs1647346476 | 414 | P>R | No | TOPMed | |
| rs1367875373 | 414 | P>S | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
NCI-TCGA gnomAD |
| rs764713394 | 416 | E>K | No |
ExAC TOPMed gnomAD |
|
| rs759855502 | 418 | V>M | No |
ExAC TOPMed gnomAD |
|
| rs774652817 | 423 | A>= | Variant assessed as Somatic; LOW impact. [NCI-TCGA] | No | NCI-TCGA |
| rs763528176 | 423 | A>E | No | gnomAD | |
|
COSM896871 rs763528176 |
423 | A>V | Variant assessed as Somatic; MODERATE impact. endometrium [NCI-TCGA, Cosmic] | No |
NCI-TCGA Cosmic cosmic curated NCI-TCGA gnomAD |
|
RCV001810615 rs1647338688 |
424 | I>M | No |
ClinVar Ensembl dbSNP |
|
| rs753198136 | 425 | A>D | No |
ExAC gnomAD |
|
| rs756703156 | 425 | A>S | No |
ExAC TOPMed gnomAD |
|
| rs756703156 | 425 | A>T | No |
ExAC TOPMed gnomAD |
|
| rs753198136 | 425 | A>V | No |
ExAC gnomAD |
|
| rs1408937465 | 429 | E>D | No |
TOPMed gnomAD |
|
| rs2148202023 | 429 | E>K | No | Ensembl | |
| rs1557957612 | 430 | A>T | No | Ensembl | |
| rs1210938549 | 430 | A>V | No | TOPMed | |
| rs1553230166 | 432 | V>A | No | Ensembl | |
| rs1485686979 | 434 | H>R | No | gnomAD | |
| rs142238268 | 435 | R>G | No |
ESP ExAC TOPMed gnomAD |
|
| rs1189319617 | 435 | R>P | No |
TOPMed gnomAD |
|
| rs1189319617 | 435 | R>Q | No |
TOPMed gnomAD |
|
| rs778805401 | 436 | Q>* | No |
TOPMed gnomAD |
|
| rs778805401 | 436 | Q>E | No |
TOPMed gnomAD |
|
| rs758965704 | 436 | Q>L | No | TOPMed | |
| rs758965704 | 436 | Q>R | No | TOPMed | |
| TCGA novel | 437 | L>R | Variant assessed as Somatic; HIGH impact. [NCI-TCGA] | No | NCI-TCGA |
| rs1416978773 | 437 | L>V | No |
TOPMed gnomAD |
|
| rs2148201893 | 439 | E>* | No | Ensembl | |
| rs771145576 | 440 | E>K | No |
ExAC gnomAD |
|
| rs1441486786 | 441 | L>I | No | gnomAD | |
| rs773396824 | 442 | R>C | No |
ExAC gnomAD |
|
| rs370554398 | 442 | R>H | No |
ESP ExAC TOPMed gnomAD |
|
| rs760606711 | 443 | R>L | No |
ExAC TOPMed gnomAD |
|
| rs760606711 | 443 | R>Q | No |
ExAC TOPMed gnomAD |
|
| rs1326895470 | 443 | R>W | No | gnomAD | |
| rs1647326651 | 444 | A>G | No |
TOPMed gnomAD |
|
| rs531294009 | 445 | A>E | No |
1000Genomes ExAC TOPMed gnomAD |
|
|
rs531294009 COSM2210434 |
445 | A>V | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
cosmic curated 1000Genomes ExAC TOPMed gnomAD |
| rs774102445 | 447 | L>I | No |
ExAC TOPMed gnomAD |
|
| rs1647326018 | 448 | S>N | No | gnomAD | |
| rs189360283 | 449 | R>C | No |
1000Genomes ExAC TOPMed gnomAD |
|
| rs149932430 | 449 | R>H | No |
ESP ExAC TOPMed gnomAD |
|
| rs149932430 | 449 | R>L | No |
ESP ExAC TOPMed gnomAD |
|
| rs769123407 | 453 | E>A | No |
ExAC TOPMed gnomAD |
|
| rs769123407 | 453 | E>G | No |
ExAC TOPMed gnomAD |
|
| rs748700869 | 455 | T>A | No | ExAC | |
| rs1220101882 | 455 | T>I | No | Ensembl | |
| rs756864028 | 456 | A>T | No |
TOPMed gnomAD |
|
| rs377022809 | 457 | I>V | No |
ESP TOPMed gnomAD |
|
| rs755522396 | 458 | G>A | No |
ExAC TOPMed gnomAD |
|
|
COSM4022996 rs1647322395 |
459 | A>T | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
NCI-TCGA Cosmic Ensembl |
| rs752034960 | 460 | V>L | No |
ExAC TOPMed gnomAD |
|
| rs1385287371 | 463 | A>S | No |
TOPMed gnomAD |
|
| rs1385287371 | 463 | A>T | No |
TOPMed gnomAD |
|
|
RCV001812947 rs1647321523 |
463 | A>V | No |
ClinVar Ensembl dbSNP |
|
| COSM4847288 | 464 | F>L | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs1210256362 | 465 | K>M | No | gnomAD | |
| rs1210256362 | 465 | K>R | No | gnomAD | |
| COSM1472713 | 467 | C>W | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs1267288023 | 468 | A>S | No | gnomAD | |
| rs765388322 | 470 | A>S | No |
ExAC gnomAD |
|
| rs1553230130 | 470 | A>V | No | Ensembl | |
| rs1422440206 | 472 | I>M | No |
TOPMed gnomAD |
|
| rs1433195419 | 476 | T>K | No | gnomAD | |
| rs1553230126 | 476 | T>S | No | Ensembl | |
|
rs201406712 RCV002241661 RCV001813095 |
479 | R>C | No |
ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs118204085 RCV002041863 |
479 | R>L | No |
ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
| rs773040738 | 481 | A>D | No |
ExAC TOPMed gnomAD |
|
| rs773040738 | 481 | A>V | No |
ExAC TOPMed gnomAD |
|
| rs1202916217 | 483 | L>F | No | gnomAD | |
| rs902988637 | 488 | R>* | No |
TOPMed gnomAD |
|
| rs200133000 | 490 | R>G | No |
1000Genomes ExAC TOPMed gnomAD |
|
| rs746257586 | 490 | R>L | No |
ExAC TOPMed gnomAD |
|
| rs1461630879 | 492 | A>E | No | TOPMed | |
| rs1238958347 | 492 | A>S | No |
TOPMed gnomAD |
|
| rs749456521 | 493 | V>D | No |
ExAC gnomAD |
|
| rs1395197329 | 493 | V>I | No | gnomAD | |
| rs1467286964 | 494 | I>T | No | gnomAD | |
| rs1168559609 | 497 | T>N | No |
TOPMed gnomAD |
|
| rs1451331645 | 497 | T>S | No |
TOPMed gnomAD |
|
| rs551883218 | 498 | R>S | No |
1000Genomes ExAC TOPMed gnomAD |
|
| COSM225970 | 499 | S>F | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs1179972066 | 503 | A>T | No | gnomAD | |
|
rs750255401 RCV002033426 |
503 | A>V | No |
ClinVar ExAC dbSNP gnomAD |
|
| TCGA novel | 504 | R>A | Variant assessed as Somatic; HIGH impact. [NCI-TCGA] | No | NCI-TCGA |
| rs967010243 | 504 | R>C | No |
TOPMed gnomAD |
|
| rs1336765862 | 505 | Q>R | No |
TOPMed gnomAD |
|
| rs1647238293 | 506 | V>G | No |
TOPMed gnomAD |
|
| rs760152160 | 507 | H>N | No |
ExAC gnomAD |
|
| rs1572052047 | 509 | C>* | No | Ensembl | |
| rs760208078 | 509 | C>R | No | Ensembl | |
|
RCV001507459 rs1331742633 |
510 | R>* | No |
ClinVar TOPMed dbSNP gnomAD |
|
| rs371489505 | 513 | F>L | No |
ESP ExAC TOPMed gnomAD |
|
| rs1553229902 | 513 | F>L | No | Ensembl | |
| rs1553229901 | 515 | L>S | No | Ensembl | |
| rs1341550191 | 516 | L>F | No | gnomAD | |
| TCGA novel | 516 | L>I | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
| rs779681839 | 516 | L>P | No | Ensembl | |
| rs2148198978 | 517 | Y>S | No | Ensembl | |
| rs771218326 | 518 | R>H | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ExAC NCI-TCGA TOPMed gnomAD |
|
RCV000733378 rs139002629 |
518 | R>S | No |
ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
| rs761819694 | 519 | E>D | No | Ensembl | |
| rs1674555327 | 519 | E>Q | No | Ensembl | |
| rs1335751664 | 520 | P>L | No |
TOPMed gnomAD |
|
| rs562318137 | 520 | P>S | No |
1000Genomes ExAC gnomAD |
|
| rs562318137 | 520 | P>T | No |
1000Genomes ExAC gnomAD |
|
| rs756341032 | 521 | P>S | No |
ExAC gnomAD |
|
| rs1674554905 | 522 | E>K | No | gnomAD | |
| rs1674554802 | 523 | A>D | No | TOPMed | |
| rs1674554701 | 524 | I>T | No | Ensembl | |
| rs748219831 | 527 | D>N | No |
ExAC gnomAD |
|
| COSM1334618 | 528 | D>Y | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
| rs1469593621 | 529 | V>I | No | gnomAD | |
|
rs974898528 COSM1472712 |
531 | R>H | Variant assessed as Somatic; MODERATE impact. breast [NCI-TCGA, Cosmic] | No |
NCI-TCGA Cosmic cosmic curated NCI-TCGA TOPMed gnomAD |
| rs201255024 | 532 | R>G | No |
ExAC gnomAD |
|
|
rs758278200 RCV001895024 |
532 | R>P | No |
ClinVar ExAC TOPMed dbSNP gnomAD |
|
| rs1674553211 | 535 | F>I | No | TOPMed | |
| rs754526647 | 535 | F>S | No | Ensembl | |
|
rs1572051895 RCV000994122 |
536 | G>V | No |
ClinVar Ensembl dbSNP |
|
| rs1259480655 | 537 | I>M | No |
TOPMed gnomAD |
|
| rs1266658818 | 538 | E>G | No | gnomAD | |
| rs763878359 | 540 | G>* | No |
ExAC gnomAD |
|
| rs1169315216 | 541 | K>N | No |
TOPMed gnomAD |
|
| rs1553229729 | 542 | L>F | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
Ensembl NCI-TCGA |
| rs1010136449 | 543 | R>C | No |
TOPMed gnomAD |
|
| rs752328700 | 543 | R>H | No |
ExAC TOPMed gnomAD |
|
| rs759039445 | 544 | G>V | No |
ExAC gnomAD |
|
| rs751050425 | 547 | R>C | No |
ExAC gnomAD |
|
| rs375525211 | 547 | R>H | No |
ESP ExAC TOPMed gnomAD |
|
| rs1340409753 | 549 | G>E | No |
TOPMed gnomAD |
|
| rs190966689 | 549 | G>R | No |
1000Genomes ExAC gnomAD |
|
| rs1674490071 | 551 | L>R | No | gnomAD | |
| rs773628430 | 552 | V>A | No |
ExAC TOPMed gnomAD |
|
| rs1674489561 | 554 | V>A | No | Ensembl | |
| rs770125793 | 555 | V>L | No |
ExAC gnomAD |
|
| rs1674489238 | 557 | G>S | No | Ensembl | |
| rs370938255 | 558 | W>* | No |
ESP ExAC gnomAD |
|
| rs532230312 | 559 | R>* | No |
1000Genomes ExAC TOPMed gnomAD |
|
| rs1456158956 | 559 | R>Q | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
NCI-TCGA TOPMed gnomAD |
| rs997370208 | 563 | G>C | No |
TOPMed gnomAD |
|
| rs1185256935 | 563 | G>D | No |
TOPMed gnomAD |
|
|
rs997370208 COSM1668031 |
563 | G>S | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
cosmic curated TOPMed gnomAD |
| rs1221397220 | 565 | T>S | No |
TOPMed gnomAD |
|
| rs780275059 | 567 | I>F | No |
ExAC gnomAD |
|
| rs777435169 | 568 | M>I | No |
ExAC gnomAD |
|
| rs749179500 | 568 | M>T | No |
ExAC gnomAD |
|
| rs1052176 | 569 | R>W | No |
1000Genomes ESP ExAC TOPMed gnomAD |
|
| rs1427445604 | 570 | V>L | No | gnomAD | |
| rs1674485712 | 574 | S>F | No | TOPMed |
2 associated diseases with P30613
[MIM: 102900]: Pyruvate kinase hyperactivity (PKHYP)
Autosomal dominant phenotype characterized by increase of red blood cell ATP. . Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 266200]: Pyruvate kinase deficiency of red cells (PKRD)
A frequent cause of hereditary non-spherocytic hemolytic anemia. Clinically, pyruvate kinase-deficient patients suffer from a highly variable degree of chronic hemolysis, ranging from severe neonatal jaundice and fatal anemia at birth, severe transfusion-dependent chronic hemolysis, moderate hemolysis with exacerbation during infection, to a fully compensated hemolysis without apparent anemia. . Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- Autosomal dominant phenotype characterized by increase of red blood cell ATP. . Note=The disease is caused by variants affecting the gene represented in this entry.
- A frequent cause of hereditary non-spherocytic hemolytic anemia. Clinically, pyruvate kinase-deficient patients suffer from a highly variable degree of chronic hemolysis, ranging from severe neonatal jaundice and fatal anemia at birth, severe transfusion-dependent chronic hemolysis, moderate hemolysis with exacerbation during infection, to a fully compensated hemolysis without apparent anemia. . Note=The disease is caused by variants affecting the gene represented in this entry.
Functions
| Description | ||
|---|---|---|
| EC Number | 2.7.1.40 | Phosphotransferases with an alcohol group as acceptor |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| extracellular exosome | A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
| pyruvate kinase complex | A protein complex which is capable of pyruvate kinase activity. |
6 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. |
| magnesium ion binding | Binding to a magnesium (Mg) ion. |
| monosaccharide binding | Binding to a monosaccharide. Monosaccharides are the simplest carbohydrates; they are polyhydroxy aldehydes HnC(=O)H or polyhydroxy ketones HnC(=O)mH with three or more carbon atoms. They form the constitutional repeating units of oligo- and polysaccharides. |
| potassium ion binding | Binding to a potassium ion (K+). |
| pyruvate kinase activity | Catalysis of the reaction |
11 GO annotations of biological process
| Name | Definition |
|---|---|
| cellular response to epinephrine stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an epinephrine stimulus. Epinephrine is a catecholamine that has the formula C9H13NO3; it is secreted by the adrenal medulla to act as a hormone, and released by certain neurons to act as a neurotransmitter active in the central nervous system. |
| cellular response to insulin stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms. |
| glycolytic process | The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules. |
| phosphorylation | The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide. |
| pyruvate biosynthetic process | The chemical reactions and pathways resulting in the formation of pyruvate, 2-oxopropanoate. |
| response to ATP | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus. |
| response to cAMP | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus. |
| response to glucose | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus. |
| response to hypoxia | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level. |
| response to metal ion | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus. |
| response to nutrient | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus. |
12 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P52489 | PYK2 | Pyruvate kinase 2 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | SS |
| P00549 | CDC19 | Pyruvate kinase 1 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | SS |
| P11979 | PKM | Pyruvate kinase PKM | Felis catus (Cat) (Felis silvestris catus) | SS |
| P00548 | PKM | Pyruvate kinase PKM | Gallus gallus (Chicken) | SS |
| Q29536 | PKLR | Pyruvate kinase PKLR | Canis lupus familiaris (Dog) (Canis familiaris) | SS |
| O62619 | PyK | Pyruvate kinase | Drosophila melanogaster (Fruit fly) | SS |
| P14618 | PKM | Pyruvate kinase PKM | Homo sapiens (Human) | EV |
| P52480 | Pkm | Pyruvate kinase PKM | Mus musculus (Mouse) | SS |
| P53657 | Pklr | Pyruvate kinase PKLR | Mus musculus (Mouse) | SS |
| P11980 | Pkm | Pyruvate kinase PKM | Rattus norvegicus (Rat) | SS |
| P12928 | Pklr | Pyruvate kinase PKLR | Rattus norvegicus (Rat) | SS |
| Q9LIK0 | PKP1 | Plastidial pyruvate kinase 1, chloroplastic | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSIQENISSL | QLRSWVSKSQ | RDLAKSILIG | APGGPAGYLR | RASVAQLTQE | LGTAFFQQQQ |
| 70 | 80 | 90 | 100 | 110 | 120 |
| LPAAMADTFL | EHLCLLDIDS | EPVAARSTSI | IATIGPASRS | VERLKEMIKA | GMNIARLNFS |
| 130 | 140 | 150 | 160 | 170 | 180 |
| HGSHEYHAES | IANVREAVES | FAGSPLSYRP | VAIALDTKGP | EIRTGILQGG | PESEVELVKG |
| 190 | 200 | 210 | 220 | 230 | 240 |
| SQVLVTVDPA | FRTRGNANTV | WVDYPNIVRV | VPVGGRIYID | DGLISLVVQK | IGPEGLVTQV |
| 250 | 260 | 270 | 280 | 290 | 300 |
| ENGGVLGSRK | GVNLPGAQVD | LPGLSEQDVR | DLRFGVEHGV | DIVFASFVRK | ASDVAAVRAA |
| 310 | 320 | 330 | 340 | 350 | 360 |
| LGPEGHGIKI | ISKIENHEGV | KRFDEILEVS | DGIMVARGDL | GIEIPAEKVF | LAQKMMIGRC |
| 370 | 380 | 390 | 400 | 410 | 420 |
| NLAGKPVVCA | TQMLESMITK | PRPTRAETSD | VANAVLDGAD | CIMLSGETAK | GNFPVEAVKM |
| 430 | 440 | 450 | 460 | 470 | 480 |
| QHAIAREAEA | AVYHRQLFEE | LRRAAPLSRD | PTEVTAIGAV | EAAFKCCAAA | IIVLTTTGRS |
| 490 | 500 | 510 | 520 | 530 | 540 |
| AQLLSRYRPR | AAVIAVTRSA | QAARQVHLCR | GVFPLLYREP | PEAIWADDVD | RRVQFGIESG |
| 550 | 560 | 570 | |||
| KLRGFLRVGD | LVIVVTGWRP | GSGYTNIMRV | LSIS |