P0C884
Gene name |
SCL34 (At2g29065, T9I4.14) |
Protein name |
Scarecrow-like protein 34 |
Names |
AtSCL34, GRAS family protein 12, AtGRAS-12 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT2G29065 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for P0C884
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-P0C884-F1 | Predicted | AlphaFoldDB |
57 variants for P0C884
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_2_12485082_T_G | 12 | F>V | No | 1000Genomes | |
| ENSVATH05621480 | 20 | N>S | No | 1000Genomes | |
| tmp_2_12485106_A_T | 20 | N>Y | No | 1000Genomes | |
| ENSVATH05621481 | 21 | L>F | No | 1000Genomes | |
| tmp_2_12485116_C_G | 23 | T>S | No | 1000Genomes | |
| ENSVATH13462304 | 65 | R>* | No | 1000Genomes | |
| tmp_2_12485320_C_T | 91 | T>I | No | 1000Genomes | |
| tmp_2_12485383_T_C | 112 | V>A | No | 1000Genomes | |
| ENSVATH13462315 | 112 | V>L | No | 1000Genomes | |
| ENSVATH05621489 | 115 | I>V | No | 1000Genomes | |
| tmp_2_12485453_A_C | 135 | E>D | No | 1000Genomes | |
| ENSVATH05621492 | 135 | E>K | No | 1000Genomes | |
| ENSVATH05621493 | 146 | Q>R | No | 1000Genomes | |
| ENSVATH00253335 | 155 | R>K | No | 1000Genomes | |
| ENSVATH14567928 | 159 | R>H | No | 1000Genomes | |
| tmp_2_12485623_G_C | 192 | S>T | No | 1000Genomes | |
| ENSVATH05621495 | 193 | N>Y | No | 1000Genomes | |
|
ENSVATH05621497 ENSVATH13462317 |
221 | S>R | No | 1000Genomes | |
| tmp_2_12485728_G_A | 227 | R>Q | No | 1000Genomes | |
| tmp_2_12485755_GGAA_TGAA,G | 236 | G>V | No | 1000Genomes | |
| tmp_2_12485780_T_G | 244 | S>R | No | 1000Genomes | |
| tmp_2_12485811_C_T | 255 | H>Y | No | 1000Genomes | |
| tmp_2_12485838_G_A | 264 | D>N | No | 1000Genomes | |
| ENSVATH00253336 | 266 | T>I | No | 1000Genomes | |
| ENSVATH13462320 | 285 | A>T | No | 1000Genomes | |
| ENSVATH14567929 | 292 | C>F | No | 1000Genomes | |
| ENSVATH00253337 | 305 | T>I | No | 1000Genomes | |
| tmp_2_12486004_C_A | 319 | S>* | No | 1000Genomes | |
| ENSVATH01921708 | 322 | D>Y | No | 1000Genomes | |
| ENSVATH01921710 | 350 | W>L | No | 1000Genomes | |
| ENSVATH00253338 | 350 | W>R | No | 1000Genomes | |
| tmp_2_12486109_A_C | 354 | D>A | No | 1000Genomes | |
| tmp_2_12486127_C_T | 360 | P>L | No | 1000Genomes | |
| ENSVATH13462321 | 372 | G>A | No | 1000Genomes | |
| ENSVATH05621507 | 376 | P>Q | No | 1000Genomes | |
| ENSVATH05621508 | 381 | S>T | No | 1000Genomes | |
| ENSVATH01921711 | 381 | S>Y | No | 1000Genomes | |
| ENSVATH00253339 | 388 | V>L | No | 1000Genomes | |
| ENSVATH05621512 | 390 | R>W | No | 1000Genomes | |
| ENSVATH05621519 | 425 | N>K | No | 1000Genomes | |
| tmp_2_12486328_C_T | 427 | P>L | No | 1000Genomes | |
| ENSVATH13462335 | 432 | A>P | No | 1000Genomes | |
| ENSVATH00253340 | 446 | L>F | No | 1000Genomes | |
| tmp_2_12486420_G_A | 458 | A>T | No | 1000Genomes | |
| tmp_2_12486447_G_A | 467 | D>N | No | 1000Genomes | |
| tmp_2_12486465_G_A | 473 | E>K | No | 1000Genomes | |
| ENSVATH05621522 | 476 | P>Q | No | 1000Genomes | |
| ENSVATH05621524 | 511 | K>N | No | 1000Genomes | |
| ENSVATH14567931 | 517 | Y>H | No | 1000Genomes | |
| tmp_2_12486714_G_A | 556 | A>T | No | 1000Genomes | |
| ENSVATH13462338 | 571 | R>I | No | 1000Genomes | |
| tmp_2_12486765_G_C | 573 | V>L | No | 1000Genomes | |
| tmp_2_12486790_C_T | 581 | T>M | No | 1000Genomes | |
| ENSVATH01921717 | 592 | G>E | No | 1000Genomes | |
| ENSVATH05621528 | 598 | R>C | No | 1000Genomes | |
| ENSVATH13462339 | 613 | L>F | No | 1000Genomes | |
| ENSVATH13462340 | 629 | P>S | No | 1000Genomes |
No associated diseases with P0C884
No regional properties for P0C884
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for P0C884 | |||
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA-binding transcription factor activity | A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. |
| sequence-specific DNA binding | Binding to DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| regulation of DNA-templated transcription | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MDPNFSESLN | GFEYFDGNPN | LLTDPMEDQY | PPPSDTLLKY | VSEILMEESN | GDYKQSMFYD |
| 70 | 80 | 90 | 100 | 110 | 120 |
| SLALRKTEEM | LQQVITDSQN | QSFSPADSLI | TNSWDASGSI | DESAYSADPQ | PVNEIMVKSM |
| 130 | 140 | 150 | 160 | 170 | 180 |
| FSDAESALQF | KKGVEEASKF | LPNSDQWVIN | LDIERSERRD | SVKEEMGLDQ | LRVKKNHERD |
| 190 | 200 | 210 | 220 | 230 | 240 |
| FEEVRSSKQF | ASNVEDSKVT | DMFDKVLLLD | GECDPQTLLD | SEIQAIRSSK | NIGEKGKKKK |
| 250 | 260 | 270 | 280 | 290 | 300 |
| KKKSQVVDFR | TLLTHCAQAI | STGDKTTALE | FLLQIRQQSS | PLGDAGQRLA | HCFANALEAR |
| 310 | 320 | 330 | 340 | 350 | 360 |
| LQGSTGPMIQ | TYYNALTSSL | KDTAADTIRA | YRVYLSSSPF | VTLMYFFSIW | MILDVAKDAP |
| 370 | 380 | 390 | 400 | 410 | 420 |
| VLHIVDFGIL | YGFQWPMFIQ | SISDRKDVPR | KLRITGIELP | QCGFRPAERI | EETGRRLAEY |
| 430 | 440 | 450 | 460 | 470 | 480 |
| CKRFNVPFEY | KAIASQNWET | IRIEDLDIRP | NEVLAVNAGL | RLKNLQDETG | SEENCPRDAV |
| 490 | 500 | 510 | 520 | 530 | 540 |
| LKLIRNMNPD | VFIHAIVNGS | FNAPFFISRF | KEAVYHYSAL | FDMFDSTLPR | DNKERIRFER |
| 550 | 560 | 570 | 580 | 590 | 600 |
| EFYGREAMNV | IACEEADRVE | RPETYRQWQV | RMVRAGFKQK | TIKPELVELF | RGKLKKWRYH |
| 610 | 620 | ||||
| KDFVVDENSK | WLLQGWKGRT | LYASSCWVPA |