O43823
Gene name |
AKAP8 (AKAP95) |
Protein name |
A-kinase anchor protein 8 |
Names |
AKAP-8, A-kinase anchor protein 95 kDa, AKAP 95 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:10270 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for O43823
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-O43823-F1 | Predicted | AlphaFoldDB |
700 variants for O43823
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs754301101 CA204084 CA404507198 RCV000190141 |
263 | G>R | Long QT syndrome [ClinVar] | Yes |
ClinGen ExAC gnomAD ClinVar dbSNP |
|
rs778290852 CA9266637 |
2 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1248928804 CA404516641 |
2 | D>G | No |
ClinGen Ensembl |
|
|
CA404516664 rs747362693 |
2 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs747362693 CA9266638 |
2 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1410893474 CA404516633 |
3 | Q>* | No |
ClinGen gnomAD |
|
|
COSM3959645 rs776280853 CA9266636 |
4 | G>C | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1599579352 CA404516584 |
4 | G>D | No |
ClinGen Ensembl |
|
|
rs1372740114 CA404516522 |
6 | G>E | No |
ClinGen TOPMed |
|
|
rs1416686206 CA404516536 |
6 | G>R | No |
ClinGen gnomAD |
|
|
rs780466979 CA9266613 |
10 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs755984203 CA9266612 |
10 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1386887448 CA404515095 |
11 | W>* | No |
ClinGen Ensembl |
|
|
CA9266611 rs568660290 |
12 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781152033 CA9266610 |
15 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1349016263 CA404515031 |
15 | P>T | No |
ClinGen gnomAD |
|
|
rs757010364 CA9266609 |
16 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA404515002 rs1428348574 |
16 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA9266586 rs764727382 |
20 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs766031371 CA9266583 |
21 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1180309872 CA404514138 |
22 | Y>F | No |
ClinGen gnomAD |
|
|
CA404514143 rs1261722110 |
22 | Y>H | No |
ClinGen gnomAD |
|
|
CA305814637 rs113147605 |
24 | T>S | No |
ClinGen Ensembl |
|
|
rs1599572610 CA404514088 |
25 | G>D | No |
ClinGen Ensembl |
|
|
rs1473740860 CA404514087 |
26 | V>M | No |
ClinGen gnomAD |
|
|
CA9266582 rs762122355 |
27 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs774811575 CA9266581 |
28 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA404513872 rs1450311700 |
31 | G>D | No |
ClinGen TOPMed |
|
|
rs747916260 CA9266546 |
34 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9266544 rs200427700 |
36 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9266543 rs768609581 |
38 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749177199 CA9266542 |
39 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199886431 CA305814217 |
40 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs199886431 CA9266540 COSM1711949 |
40 | A>T | skin [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs1211065572 CA404513690 |
41 | Q>R | No |
ClinGen TOPMed |
|
|
CA9266538 rs780698925 |
43 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1599571935 CA404513660 |
43 | T>P | No |
ClinGen Ensembl |
|
|
CA404513653 rs780698925 |
43 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1568254193 CA404513650 |
44 | S>G | No |
ClinGen Ensembl |
|
|
rs900563839 CA305814213 |
46 | T>I | No |
ClinGen TOPMed |
|
|
CA404513551 rs1293704113 |
49 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1293704113 CA404513556 |
49 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA404513543 rs1246598925 |
49 | A>V | No |
ClinGen gnomAD |
|
|
CA9266535 rs765659943 |
50 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA305814202 rs1040875337 |
50 | T>P | No |
ClinGen TOPMed |
|
|
CA404513440 rs1405025128 |
53 | Y>F | No |
ClinGen TOPMed |
|
|
rs371961765 COSM1391107 CA9266533 |
54 | G>S | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA305814186 rs369396055 |
56 | A>V | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1385331172 CA404513338 |
57 | S>L | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 60 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs773531995 CA9266530 |
61 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA305814179 rs375568292 |
62 | K>R | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA404513148 rs1568254149 |
64 | N>D | No |
ClinGen Ensembl |
|
|
CA9266528 rs543107450 |
64 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1373184159 CA404513096 |
66 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1373184159 CA404513098 |
66 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA9266526 rs372276967 |
67 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs201040301 CA9266523 COSM144639 |
69 | A>G | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs201040301 CA9266524 |
69 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9266519 rs757004459 |
71 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 71 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9266517 rs779421659 |
72 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404512936 rs1316614194 |
73 | P>R | No |
ClinGen gnomAD |
|
|
CA9266515 rs143110237 |
74 | A>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs143110237 CA9266514 |
74 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1409530929 CA404512908 CA404512904 |
75 | M>L | No |
ClinGen gnomAD |
|
|
CA9266513 rs760847556 |
75 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs540992457 CA404512880 |
76 | H>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs540992457 CA9266512 |
76 | H>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA404512857 rs182841537 |
77 | M>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs182841537 CA9266511 |
77 | M>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9266510 rs200946181 |
78 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1171532363 CA404512796 |
79 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1171532363 CA404512794 |
79 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
CA9266507 rs138205008 |
81 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9266506 rs138205008 |
81 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371717938 CA9266505 |
82 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA404512706 rs1206510197 |
85 | C>W | No |
ClinGen gnomAD |
|
|
CA305814088 rs953618674 |
86 | T>A | No |
ClinGen Ensembl |
|
|
CA404512698 rs1184116236 |
86 | T>I | No |
ClinGen TOPMed |
|
|
CA305814082 rs1029152918 |
87 | D>G | No |
ClinGen Ensembl |
|
|
CA9266503 rs776305733 |
87 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746722423 CA9266501 |
90 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1020376129 CA305814071 |
91 | S>F | No |
ClinGen Ensembl |
|
|
rs1263913817 CA404512595 |
92 | L>H | No |
ClinGen gnomAD |
|
|
rs777549589 CA9266500 |
93 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1425445803 CA404512568 |
94 | A>S | No |
ClinGen TOPMed |
|
|
CA305814070 rs145618483 |
95 | K>R | No |
ClinGen ESP |
|
|
CA404512501 rs1340474154 |
97 | N>K | No |
ClinGen gnomAD |
|
|
CA9266499 rs755415548 |
97 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA404512479 rs1332921187 |
98 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA9266498 rs749584259 |
99 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780425403 CA9266497 |
99 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs1599571691 CA404512416 |
101 | D>E | No |
ClinGen Ensembl |
|
|
CA404512433 rs756600778 |
101 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA9266496 rs756600778 |
101 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA404512257 rs1456420803 |
108 | G>C | No |
ClinGen gnomAD |
|
|
CA9266495 rs537386173 |
108 | G>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs537386173 CA404512251 |
108 | G>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs141962668 CA9266493 |
109 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9266492 rs751838083 |
110 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA404512200 rs1236770565 |
110 | G>V | No |
ClinGen gnomAD |
|
|
CA9266490 rs762851384 |
111 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA305814043 rs17855604 |
113 | G>D | No |
ClinGen Ensembl |
|
|
CA9266488 rs138778621 |
113 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs370984046 CA9266487 |
114 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs770618850 CA404512043 |
115 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 115 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs770618850 CA9266485 |
115 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404512033 rs1356111761 |
115 | G>V | No |
ClinGen gnomAD |
|
|
CA9266483 rs773038027 |
116 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA9266484 rs773038027 |
116 | G>W | No |
ClinGen ExAC gnomAD |
|
|
rs200266612 CA305814026 |
117 | E>G | No |
ClinGen Ensembl |
|
|
rs886563750 CA305814027 |
117 | E>K | No |
ClinGen TOPMed |
|
|
CA9266482 rs771653952 |
118 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA404511958 rs1384334246 |
118 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA404511927 rs1343127540 |
119 | I>T | No |
ClinGen gnomAD |
|
|
CA9266481 rs747785344 |
119 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs780294003 CA9266480 |
120 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs150227649 CA9266479 CA404511873 |
121 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs140271912 CA404511866 |
122 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9266477 rs537526016 |
122 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA305814011 rs537526016 |
122 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA404511861 rs537526016 |
122 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA9266478 rs140271912 |
122 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
| rs1489784994 | 123 | E>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA404511829 rs1293175258 |
124 | S>G | No |
ClinGen gnomAD |
|
|
rs1281127140 CA404510601 |
126 | F>L | No |
ClinGen gnomAD |
|
|
CA9266450 rs199596712 |
127 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9266449 rs753715966 |
127 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404510597 rs199596712 |
127 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs557566826 CA9266448 |
129 | Q>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9266447 rs543998894 |
130 | P>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs750317687 CA9266446 |
130 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761375603 CA305810881 |
131 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs117367631 CA9266442 |
132 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9266443 rs117367631 |
132 | E>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs762557069 CA9266441 |
134 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA404510338 rs1599571074 |
135 | D>A | No |
ClinGen Ensembl |
|
|
CA9266440 rs777006737 |
135 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA9266439 rs771230436 |
136 | S>Y | No |
ClinGen ExAC |
|
|
CA404510299 rs1599571070 |
137 | R>G | No |
ClinGen Ensembl |
|
|
rs1224492328 CA404510281 CA404510282 |
137 | R>S | No |
ClinGen TOPMed |
|
|
rs747522574 CA9266438 |
138 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA404510268 rs1175966049 |
138 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA404510275 rs1175966049 |
138 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1252549849 CA404510253 |
139 | C>R | No |
ClinGen gnomAD |
|
|
CA9266437 rs778326770 |
141 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404510195 rs1263163161 |
142 | E>Q | No |
ClinGen TOPMed |
|
|
rs748223348 CA9266435 |
143 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404510135 rs1599571032 |
144 | N>T | No |
ClinGen Ensembl |
|
|
CA9266433 rs755272068 |
145 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9266434 rs778814765 |
145 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1389598762 CA404510081 |
146 | Y>C | No |
ClinGen gnomAD |
|
|
CA404510089 rs1306087762 |
146 | Y>N | No |
ClinGen gnomAD |
|
|
rs1389598762 CA404510076 |
146 | Y>S | No |
ClinGen gnomAD |
|
|
CA9266431 rs779998462 |
147 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9266430 rs199551594 COSM992171 |
147 | R>H | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA9266429 rs750388000 |
148 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9266428 rs146125281 |
150 | Y>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA404509957 rs1411652142 |
151 | S>I | No |
ClinGen gnomAD |
|
|
rs1310980536 CA404509912 |
153 | D>E | No |
ClinGen TOPMed |
|
|
rs763550420 CA9266425 |
153 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404509915 rs1405977146 |
153 | D>V | No |
ClinGen TOPMed |
|
|
rs762609413 CA9266424 |
155 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775060199 CA9266423 |
155 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA9266422 CA9266421 rs773627639 |
156 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9266419 rs772661694 |
157 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs774502753 CA9266417 |
161 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs375658740 CA9266416 |
162 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs558615660 CA9266415 |
162 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9266414 rs780411972 |
163 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756024480 CA9266413 |
164 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs148526102 CA9266409 |
167 | G>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs148526102 RCV000882064 CA9266407 |
167 | G>E | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs142229471 CA9266412 CA9266410 |
167 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9266408 rs148526102 |
167 | G>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs142229471 CA9266411 |
167 | G>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| rs752767200 | 169 | Q>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA404509581 rs1384599376 |
169 | Q>R | No |
ClinGen gnomAD |
|
|
rs768155611 CA305810705 |
171 | S>G | No |
ClinGen gnomAD |
|
|
rs1410578177 CA404509519 |
172 | E>D | No |
ClinGen gnomAD |
|
|
CA9266404 rs764834209 |
173 | C>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1163456064 CA404509475 |
174 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1163456064 CA404509477 |
174 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs759068489 CA9266403 |
174 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404509443 rs1599570881 |
175 | D>A | No |
ClinGen Ensembl |
|
|
CA9266402 rs773646159 |
176 | P>S | No |
ClinGen ExAC TOPMed |
|
|
rs12983369 CA9266399 |
178 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201218309 CA9266400 |
178 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9266398 rs749357933 |
180 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs144996992 CA404509359 |
180 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs144996992 COSM1524545 CA9266396 |
180 | R>Q | lung oesophagus [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs749357933 CA9266397 |
180 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs770173155 CA9266395 |
181 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA9266393 rs781056958 |
184 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747038257 CA9266391 |
187 | M>K | No |
ClinGen ExAC gnomAD |
|
|
CA9266389 rs757939809 |
188 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9266390 rs569588266 |
188 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA404509204 rs1290571958 |
189 | G>C | No |
ClinGen TOPMed |
|
|
rs919960025 CA305810644 |
189 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA404509202 rs1290571958 |
189 | G>S | No |
ClinGen TOPMed |
|
|
rs919960025 CA404509194 |
189 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs199550070 CA404509192 |
190 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs773929361 CA9266387 |
190 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199550070 CA9266388 |
190 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs767992491 CA9266384 |
191 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9266386 rs148406708 |
191 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9266385 rs148406708 |
191 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9266382 rs762070995 |
192 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs1396458339 CA404509153 |
192 | Q>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs567290517 CA305810607 |
193 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs374092087 CA9266380 |
194 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs61757556 CA9266379 |
194 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1489803018 CA404509024 |
197 | D>G | No |
ClinGen gnomAD |
|
|
rs954721453 CA305810572 |
197 | D>N | No |
ClinGen gnomAD |
|
|
CA9266377 rs775735026 |
198 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs547463044 CA9266375 |
198 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs547463044 CA9266374 |
198 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA9266376 rs775735026 |
198 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA305810560 rs995910484 |
201 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1229848551 CA404508902 |
203 | T>I | No |
ClinGen gnomAD |
|
|
CA404508882 rs1282895129 CA404508880 |
204 | F>L | No |
ClinGen gnomAD |
|
|
CA404508854 rs1403417073 |
205 | M>T | No |
ClinGen gnomAD |
|
|
CA404508876 rs1251624887 |
205 | M>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs370861200 COSM1182386 CA9266373 |
206 | R>C | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs111389458 RCV000879918 CA9266372 |
206 | R>H | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA9266371 rs746746325 |
207 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA305810552 rs942141241 |
208 | D>N | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 210 | F>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9266369 rs532876878 |
211 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1270812806 CA404508661 |
212 | P>L | No |
ClinGen gnomAD |
|
|
CA404508651 rs1568253547 |
213 | P>A | No |
ClinGen Ensembl |
|
|
rs1199467640 CA404508636 |
213 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1199467640 CA404508642 |
213 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1326927523 CA404508618 |
214 | A>T | No |
ClinGen gnomAD |
|
|
rs528469952 CA305810540 |
215 | A>S | No |
ClinGen Ensembl |
|
|
CA9266364 rs563931587 |
215 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs757681607 CA9266362 |
216 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764505670 CA9266360 |
217 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA404508491 rs1347751505 |
218 | E>D | No |
ClinGen gnomAD |
|
|
rs1284371995 CA404508457 |
220 | L>P | No |
ClinGen gnomAD |
|
|
CA404508456 rs1284371995 |
220 | L>R | No |
ClinGen gnomAD |
|
|
CA305810510 rs938921665 |
221 | S>C | No |
ClinGen Ensembl |
|
|
CA9266356 rs759524859 |
222 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765428584 CA9266357 |
222 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA305810485 rs907400561 |
223 | P>A | No |
ClinGen Ensembl |
|
|
CA404508323 rs1296033178 |
225 | N>Y | No |
ClinGen TOPMed |
|
|
CA9266351 RCV000971962 rs200383217 |
226 | E>K | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1431120498 CA404508253 |
227 | L>V | No |
ClinGen gnomAD |
|
|
rs1173015735 CA404508214 |
228 | N>K | No |
ClinGen gnomAD |
|
|
CA305810459 rs1010782035 |
228 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA404508178 rs1231034890 |
230 | V>M | No |
ClinGen gnomAD |
|
|
CA9266349 rs561267299 |
231 | G>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1183940094 CA404508168 |
231 | G>S | No |
ClinGen gnomAD |
|
|
rs1242658070 CA404508147 |
232 | G>R | No |
ClinGen gnomAD |
|
|
CA9266348 rs768260540 |
232 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs779577362 CA9266345 |
233 | R>Q | No |
ClinGen ExAC TOPMed |
|
|
CA9266347 rs748716805 |
233 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404508093 rs1261277688 |
234 | G>D | No |
ClinGen TOPMed |
|
|
CA404508075 rs1178992484 |
235 | L>P | No |
ClinGen TOPMed |
|
| TCGA novel | 236 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9266343 rs778290315 CA9266342 |
237 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA404507954 rs1356868314 |
238 | P>L | No |
ClinGen TOPMed |
|
|
CA404507962 rs1174761564 |
238 | P>T | No |
ClinGen TOPMed |
|
|
rs1037916527 CA305810412 |
239 | S>P | No |
ClinGen TOPMed |
|
|
RCV000891067 CA9266337 rs374389542 |
240 | P>H | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA404507847 rs1202600832 |
240 | P>S | No |
ClinGen gnomAD |
|
|
CA305810391 rs1055952904 |
241 | S>I | No |
ClinGen TOPMed gnomAD |
|
|
rs766422224 CA9266334 |
242 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766422224 COSM1182383 CA404507749 |
242 | R>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA9266335 rs538615949 |
242 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1181886340 CA404507700 |
243 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA9266331 rs761573604 |
244 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA404507678 rs1238201909 |
244 | P>L | No |
ClinGen gnomAD |
|
|
CA9266330 rs761573604 |
244 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs774386640 COSM1680765 CA9266329 |
245 | P>L | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA404507674 rs1215374622 |
245 | P>T | No |
ClinGen gnomAD |
|
|
CA404507606 rs375504255 |
247 | L>F | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1477990727 CA404507588 |
247 | L>R | No |
ClinGen TOPMed |
|
|
CA305810377 rs375504255 |
247 | L>V | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1241470823 CA404507565 |
249 | S>F | No |
ClinGen gnomAD |
|
|
rs774877555 CA9266326 |
250 | Q>* | No |
ClinGen ExAC |
|
| TCGA novel | 251 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA404507495 rs1313724494 |
252 | M>V | No |
ClinGen gnomAD |
|
|
CA404507457 rs1243066328 |
253 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
CA404507467 rs1243066328 |
253 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs745584936 CA404507389 |
255 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745584936 CA9266324 |
255 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1304748437 CA404507349 |
256 | Y>C | No |
ClinGen TOPMed |
|
|
rs1417431780 CA404507364 |
256 | Y>H | No |
ClinGen TOPMed |
|
|
CA404507340 rs1320118342 |
257 | G>S | No |
ClinGen gnomAD |
|
|
rs144582281 CA9266322 |
258 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs144582281 CA9266321 RCV000971316 |
258 | V>M | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1161598305 CA404507262 |
259 | M>I | No |
ClinGen gnomAD |
|
|
CA9266320 rs779284132 |
259 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs1375398880 CA404507222 |
261 | M>I | No |
ClinGen TOPMed |
|
|
CA404507230 rs1446478436 |
261 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
CA9266319 rs755451146 |
262 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs754301101 CA9266318 |
263 | G>W | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 264 | A>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1474574714 CA404507177 |
264 | A>P | No |
ClinGen gnomAD |
|
|
CA9266317 rs766433853 |
264 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404507154 rs1490293541 |
265 | G>D | No |
ClinGen gnomAD |
|
|
CA9266314 rs567114306 |
266 | G>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9266315 rs201942739 |
266 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA305810286 rs761984246 |
267 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1290014113 CA404507127 |
267 | Y>H | No |
ClinGen gnomAD |
|
|
CA9266313 rs761984246 |
267 | Y>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1359501907 CA404507101 |
268 | D>N | No |
ClinGen gnomAD |
|
|
CA9266311 rs763893708 |
270 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA404506960 rs1178742400 |
271 | M>I | No |
ClinGen TOPMed |
|
|
rs1470776913 CA404506968 |
271 | M>T | No |
ClinGen TOPMed |
|
|
CA305810271 rs879171993 |
272 | P>R | No |
ClinGen Ensembl |
|
|
CA404506888 rs1350511945 |
274 | G>E | No |
ClinGen gnomAD |
|
|
rs775496511 CA9266309 |
274 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1165142541 CA404506867 |
275 | C>S | No |
ClinGen TOPMed |
|
|
rs772828195 CA9266307 |
277 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA9266306 rs776467913 COSM3378580 |
277 | R>H | Variant assessed as Somatic; 0.0 impact. pancreas [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs533862171 CA9266305 |
278 | S>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA404506737 rs1482067092 |
280 | P>A | No |
ClinGen gnomAD |
|
|
rs769057727 CA9266302 |
281 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779146472 CA404506699 |
281 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1203134365 CA404506679 |
282 | M>I | No |
ClinGen gnomAD |
|
|
CA404506686 rs1265500562 |
282 | M>T | No |
ClinGen gnomAD |
|
|
rs1305262102 CA404506671 |
283 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs201087231 CA9266301 |
283 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA305810228 rs201087231 |
283 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9266300 rs201087231 |
283 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1305262102 CA404506668 |
283 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs750533192 CA9266298 |
284 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs369628844 CA9266299 |
284 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9266295 rs757485353 |
285 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9266296 rs377047890 |
285 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 286 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9266292 rs146135700 |
287 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs763864182 CA9266293 |
287 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA9266256 rs747084890 |
289 | K>R | No |
ClinGen ExAC gnomAD |
|
|
RCV000954771 CA9266254 rs45479794 |
295 | R>C | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs45479794 CA404506087 |
295 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9266253 rs374011971 |
295 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA404506077 rs374011971 |
295 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs778915734 CA9266251 |
296 | F>C | No |
ClinGen ExAC TOPMed |
|
|
CA404506074 rs1315048906 |
296 | F>I | No |
ClinGen gnomAD |
|
|
CA9266252 rs757688688 |
296 | F>W | No |
ClinGen ExAC |
|
|
CA305809640 rs981491959 |
297 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs199931184 CA9266249 |
298 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9266248 rs199931184 |
298 | P>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA305809626 rs867870812 |
299 | D>N | No |
ClinGen Ensembl |
|
|
CA9266246 rs778223401 |
301 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1433315191 CA404505855 |
304 | K>E | No |
ClinGen TOPMed |
|
|
rs1189149472 CA404505846 |
304 | K>R | No |
ClinGen gnomAD |
|
|
rs752673284 CA9266242 |
305 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs562521789 CA9266243 |
305 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1298596067 CA404505755 |
308 | F>L | No |
ClinGen TOPMed |
|
|
rs141922967 CA9266238 |
310 | L>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs199867696 CA9266236 |
312 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs199867696 CA305809580 |
312 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371432747 CA404505638 |
313 | E>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9266235 rs371432747 |
313 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA305809575 rs564210492 |
314 | P>S | No |
ClinGen Ensembl |
|
|
rs148305720 CA9266234 |
315 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 315 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9266233 rs779252959 |
316 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs779252959 CA404505543 |
316 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA404505508 rs1341559858 |
317 | K>R | No |
ClinGen gnomAD |
|
|
CA404505482 rs1568252967 |
319 | A>T | No |
ClinGen Ensembl |
|
|
CA9266231 rs749125058 |
319 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs115439396 CA9266229 |
320 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
RCV000904928 CA9266228 rs115439396 |
320 | R>Q | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs779664437 CA9266230 |
320 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs567716912 CA9266225 |
321 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs567716912 CA9266226 |
321 | V>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767123360 CA9266227 |
321 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1478651763 CA404505431 |
322 | D>H | No |
ClinGen gnomAD |
|
|
CA404505427 rs1478651763 |
322 | D>Y | No |
ClinGen gnomAD |
|
|
CA9266222 rs553738230 |
323 | S>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9266221 rs766581299 |
323 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA9266220 rs367556124 |
325 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1338832066 CA404505318 |
326 | D>H | No |
ClinGen gnomAD |
|
|
rs1010872048 CA305809511 |
328 | S>F | No |
ClinGen Ensembl |
|
|
rs761951154 CA9266217 |
329 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs201405913 COSM1244752 CA404505255 |
329 | E>K | Variant assessed as Somatic; 0.0 impact. oesophagus [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes NCI-TCGA TOPMed gnomAD |
|
CA305809498 rs201405913 |
329 | E>Q | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA305809284 rs200305270 |
332 | D>G | No |
ClinGen 1000Genomes |
|
|
rs1280443678 CA404504989 |
332 | D>Y | No |
ClinGen TOPMed |
|
|
CA404504934 rs1256714813 |
334 | A>G | No |
ClinGen TOPMed |
|
|
CA404504943 rs1218628167 |
334 | A>T | No |
ClinGen TOPMed |
|
|
rs1378532416 CA404504928 |
335 | G>C | No |
ClinGen gnomAD |
|
|
rs770882953 CA9266191 |
337 | F>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770882953 CA305809281 |
337 | F>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1242715297 CA404504860 |
338 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs560438541 CA9266190 |
338 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA305809276 rs560438541 |
338 | R>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs149598752 CA305809266 |
340 | G>E | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs375676951 CA9266189 |
340 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA404504801 rs1568252792 |
341 | D>N | No |
ClinGen Ensembl |
|
| TCGA novel | 343 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1192939395 CA404504718 |
344 | F>L | No |
ClinGen TOPMed |
|
|
rs1371236566 CA404504665 |
346 | G>D | No |
ClinGen TOPMed |
|
|
CA9266173 rs138223241 |
347 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs747019407 CA9266170 |
348 | D>G | No |
ClinGen ExAC TOPMed |
|
|
CA9266171 rs770651728 |
348 | D>N | No |
ClinGen ExAC gnomAD |
|
|
RCV000964055 CA9266169 rs34063092 |
350 | L>F | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs778447463 CA9266166 |
351 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs754591935 CA305808087 |
351 | C>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9266164 rs748913936 |
352 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA305808083 rs749344859 |
353 | S>T | No |
ClinGen TOPMed gnomAD |
|
|
CA305808079 rs932022124 |
355 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
CA9266161 rs752151622 |
357 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA9266127 rs138174418 |
360 | K>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 360 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA404502293 rs1239564420 |
361 | E>D | No |
ClinGen gnomAD |
|
|
CA305807022 rs916514675 |
361 | E>K | No |
ClinGen Ensembl |
|
|
rs772466008 CA9266123 |
363 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1254075328 CA404502247 |
364 | D>G | No |
ClinGen gnomAD |
|
|
CA305807005 rs867833489 |
365 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
CA305807007 rs867833489 |
365 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA404502225 rs779457121 |
366 | D>N | No |
ClinGen ExAC gnomAD |
|
|
COSM709700 CA9266121 rs779457121 |
366 | D>Y | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA9266118 rs755393923 |
367 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1237995595 CA404502199 |
367 | V>M | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 369 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9266115 rs756343813 |
370 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs368973978 CA9266114 |
371 | R>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA404502079 rs1262136071 |
373 | K>T | No |
ClinGen TOPMed |
|
|
rs767283404 CA9266113 |
374 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs767283404 CA404502065 |
374 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA9266111 rs751500989 |
378 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs140071691 CA305806953 |
380 | T>M | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA305806956 rs954460996 |
380 | T>P | No |
ClinGen Ensembl |
|
|
rs1422935061 CA404501950 |
381 | R>Q | No |
ClinGen gnomAD |
|
|
rs974441300 CA305806948 |
381 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs762942536 CA9266108 |
383 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
COSM1182385 CA9266106 rs933036638 |
383 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA404501916 rs1483460306 |
384 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
CA9266105 rs775141589 |
384 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1286906975 CA404501891 |
386 | D>A | No |
ClinGen gnomAD |
|
|
rs1355924852 CA404501894 |
386 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA404499653 rs1319058001 |
388 | I>V | No |
ClinGen gnomAD |
|
|
CA9266061 rs374745328 |
392 | C>S | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1302862019 CA404499546 |
393 | S>C | No |
ClinGen gnomAD |
|
|
rs1599559109 CA404499510 |
395 | C>S | No |
ClinGen Ensembl |
|
|
CA404499480 rs1328901813 |
397 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA9266058 rs764482753 COSM3822167 |
398 | R>C | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA404499476 rs764482753 |
398 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA9266057 rs763283589 |
398 | R>H | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 398 | R>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9266056 rs775782451 COSM3937910 |
401 | D>H | oesophagus [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs775782451 CA404499436 |
401 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA9266054 rs746292506 |
402 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9266053 rs776784836 |
403 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404499393 rs1399970440 |
404 | E>K | No |
ClinGen TOPMed |
|
|
rs1276850016 CA404499389 |
404 | E>V | No |
ClinGen TOPMed |
|
|
CA404499379 rs1234707645 |
406 | Q>K | No |
ClinGen TOPMed |
|
|
rs142110198 CA9266052 |
406 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs61755985 CA9266050 |
407 | K>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs61755985 CA9266051 |
407 | K>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs772037464 CA9266049 |
410 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
rs747991542 CA9266048 |
412 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404499279 rs1287957262 |
415 | K>E | No |
ClinGen TOPMed |
|
|
CA305803671 rs758881073 |
416 | E>D | No |
ClinGen Ensembl |
|
|
rs754959616 CA9266046 |
416 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1215099372 CA404499263 |
416 | E>Q | No |
ClinGen gnomAD |
|
|
rs753707156 CA9266045 |
418 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9266043 rs755547911 |
419 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200109371 CA9266044 |
419 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA404499195 rs1568424426 |
422 | S>N | No |
ClinGen Ensembl |
|
|
CA9266042 CA305803654 rs750125258 |
422 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767177827 COSM438777 CA9266041 |
423 | T>S | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs956723912 CA305803643 |
424 | K>R | No |
ClinGen Ensembl |
|
|
CA9266040 rs761415408 |
426 | P>H | No |
ClinGen ExAC |
|
|
CA404499148 rs61757660 |
427 | D>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9266038 rs61757660 |
427 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9266036 rs776997042 |
430 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776997042 CA9266037 |
430 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 442 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 445 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs201453989 CA9266001 COSM1182384 |
447 | R>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA9266002 rs536847592 |
447 | R>W | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs758017011 CA9266000 |
448 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs754160659 CA9265999 COSM992166 |
448 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA404498968 rs1254665162 |
450 | E>D | No |
ClinGen TOPMed |
|
|
CA404498974 rs1312940124 |
450 | E>K | No |
ClinGen TOPMed |
|
|
CA404498964 rs1218925466 |
451 | L>S | No |
ClinGen gnomAD |
|
|
CA9265997 rs139715279 |
453 | E>Q | No |
ClinGen ESP ExAC gnomAD |
|
|
CA404498936 rs1191921591 |
455 | E>K | No |
ClinGen gnomAD |
|
|
rs1263020783 CA404498923 |
456 | T>I | No |
ClinGen TOPMed |
|
|
rs767746415 CA9265995 |
457 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA305803233 rs761963157 |
458 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761963157 CA9265994 |
458 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA305803203 rs374602063 |
459 | P>L | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs113475650 RCV000887772 CA9265993 |
459 | P>T | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA9265992 rs184278305 |
461 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA305803186 rs201801143 |
462 | D>G | No |
ClinGen 1000Genomes |
|
| TCGA novel | 462 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1450546468 CA404498887 |
463 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1443202876 CA404498884 |
463 | P>H | No |
ClinGen gnomAD |
|
|
rs1443202876 CA404498882 |
463 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA305803183 rs963109568 |
464 | F>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs533062877 CA9265950 |
466 | G>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA404498866 rs1295320581 |
466 | G>R | No |
ClinGen TOPMed |
|
|
rs1189963170 CA404498326 |
467 | I>T | No |
ClinGen gnomAD |
|
|
CA9265948 rs761408669 |
469 | Q>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 470 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs962665377 CA305802561 |
471 | H>L | No |
ClinGen TOPMed |
|
|
CA9265945 CA404498181 rs748890822 |
473 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| rs758600630 | 473 | F>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9265946 rs768429460 |
473 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs201828341 CA9265941 |
476 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA404498091 rs1340390312 |
480 | H>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1599557815 CA404498081 |
480 | H>P | No |
ClinGen Ensembl |
|
|
CA9265939 rs758778668 |
482 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404497974 rs1281399736 |
485 | D>N | No |
ClinGen gnomAD |
|
|
rs768804796 CA305802506 |
486 | M>L | No |
ClinGen Ensembl |
|
|
rs377455281 CA9265936 |
486 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1166758130 CA404497913 |
487 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA404497849 rs754057316 |
491 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9265935 rs754057316 |
491 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9265934 rs766206242 |
491 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9265933 rs762573325 |
492 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9265931 rs767522013 |
493 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA9265929 rs774012866 |
495 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775251991 CA9265926 |
497 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762759792 COSM181580 CA404497750 |
497 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA9265925 rs369955411 |
500 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9265923 rs773404765 |
502 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA9265922 rs150603939 |
505 | N>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs748593622 CA9265921 |
505 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1399340934 CA404497601 |
506 | H>Q | No |
ClinGen gnomAD |
|
|
CA9265920 rs779034859 |
506 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA9265919 rs755021697 |
507 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA305802459 rs917011855 |
508 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1272082169 CA404497557 |
508 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs779932239 CA9265900 COSM213154 |
510 | L>F | breast [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs756373724 CA9265898 |
512 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA9265897 rs746067463 |
513 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA305801295 rs531108041 |
514 | Q>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs757085860 CA9265895 |
518 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA9265894 rs751596065 |
519 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs1369399185 CA404496539 |
520 | L>F | No |
ClinGen TOPMed |
|
|
CA404496530 rs1369399185 |
520 | L>V | No |
ClinGen TOPMed |
|
|
CA404496510 rs1407622749 |
521 | H>R | No |
ClinGen TOPMed |
|
|
CA9265893 rs764149757 |
522 | V>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 523 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9265892 rs758367334 |
524 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1406016403 CA404496439 |
527 | L>V | No |
ClinGen gnomAD |
|
|
CA305801242 rs76501168 |
528 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA9265890 rs764590480 |
531 | H>N | No |
ClinGen ExAC TOPMed |
|
|
CA404496365 rs1227485832 |
532 | I>T | No |
ClinGen TOPMed |
|
|
CA9265889 rs141841312 |
533 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1186425037 CA404496303 |
537 | E>Q | No |
ClinGen gnomAD |
|
|
rs1486903911 CA404496289 |
538 | K>Q | No |
ClinGen gnomAD |
|
|
CA9265887 rs113780353 |
539 | Y>C | No |
ClinGen ExAC |
|
|
rs1395733803 CA404495983 |
543 | E>K | No |
ClinGen gnomAD |
|
|
rs1446120256 CA404495954 |
544 | D>A | No |
ClinGen gnomAD |
|
|
CA404495873 rs1180884860 |
547 | T>I | No |
ClinGen gnomAD |
|
|
CA404495814 rs1187703234 |
551 | V>I | No |
ClinGen gnomAD |
|
|
CA9265855 rs748168148 |
553 | P>R | No |
ClinGen ExAC TOPMed |
|
|
CA305796039 rs950117605 |
555 | M>V | No |
ClinGen Ensembl |
|
|
CA9265852 rs753296829 |
557 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA9265853 rs138139780 |
557 | G>R | No |
ClinGen ESP ExAC |
|
| TCGA novel | 557 | G>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 558 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA404495674 rs1203564968 |
559 | D>N | No |
ClinGen gnomAD |
|
|
CA404495651 rs1198090630 |
560 | N>S | No |
ClinGen TOPMed |
|
| TCGA novel | 561 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1215201215 CA404495552 |
564 | E>D | No |
ClinGen gnomAD |
|
|
CA404495567 rs1243576266 |
564 | E>K | No |
ClinGen gnomAD |
|
|
rs1347298709 CA404495542 |
565 | D>Y | No |
ClinGen gnomAD |
|
|
CA305796033 rs147009364 |
567 | K>R | No |
ClinGen ESP TOPMed |
|
|
rs1555752602 CA9265848 |
568 | E>D | No |
ClinGen Ensembl |
|
|
rs1301495550 CA404495464 |
568 | E>G | No |
ClinGen gnomAD |
|
|
rs755822440 CA9265847 |
569 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA9265845 rs764484665 |
570 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9265846 rs764484665 |
570 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs915900145 CA305796022 |
572 | E>K | No |
ClinGen Ensembl |
|
|
CA404495389 rs1297892805 |
573 | V>A | No |
ClinGen gnomAD |
|
|
CA404495377 rs1440484198 |
574 | A>D | No |
ClinGen gnomAD |
|
|
CA9265843 rs765693748 |
575 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1472042670 CA404495374 |
575 | A>T | No |
ClinGen TOPMed |
|
|
rs765693748 CA9265842 |
575 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1394013997 CA404495349 |
576 | D>V | No |
ClinGen gnomAD |
|
|
CA404495340 rs1159356472 |
577 | V>G | No |
ClinGen Ensembl |
|
|
CA9265838 rs138652097 |
577 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA305796013 rs909104923 |
578 | L>V | No |
ClinGen TOPMed |
|
|
CA9265837 rs773549065 |
580 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs200241726 CA9265836 |
581 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404495310 rs200241726 |
581 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9265835 rs747928960 |
582 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774133689 CA9265834 |
583 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA404495295 rs1278366290 |
584 | A>E | No |
ClinGen gnomAD |
|
|
CA404495297 rs1485376392 |
584 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs375385159 CA9265831 |
586 | V>E | No |
ClinGen ESP ExAC gnomAD |
|
|
rs749235652 CA9265832 |
586 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs749235652 CA9265833 |
586 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA9265830 rs755591473 |
588 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA305796007 rs978900886 |
588 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs756893665 CA9265827 |
589 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs150076099 CA9265828 |
589 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9265826 rs576285040 |
591 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs868558866 CA305795975 |
592 | E>K | No |
ClinGen Ensembl |
|
|
CA404495239 rs765576072 |
594 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765576072 CA404495238 |
594 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9265825 rs765576072 |
594 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA305795970 rs921338802 |
595 | P>A | No |
ClinGen TOPMed |
|
|
rs61757661 CA9265822 |
596 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1599553467 CA404495227 |
597 | P>T | No |
ClinGen Ensembl |
|
|
CA305795951 rs1017698390 |
599 | S>N | No |
ClinGen Ensembl |
|
|
CA9265820 rs773387673 |
599 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA9265819 rs767857353 |
600 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs1260330774 CA404495196 |
601 | G>E | No |
ClinGen gnomAD |
|
|
CA9265817 CA404495200 COSM355656 rs774075327 |
601 | G>R | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs370347087 CA305795920 |
602 | E>D | No |
ClinGen ESP gnomAD |
|
|
rs768497457 CA9265816 |
602 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs375669146 CA9265815 |
603 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1271119677 CA404495187 |
603 | P>S | No |
ClinGen gnomAD |
|
|
rs745410158 CA404495073 CA305795916 |
606 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA305795911 rs146444610 |
607 | E>A | No |
ClinGen ESP gnomAD |
|
|
CA9265811 rs374086322 |
607 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs777574889 CA305795908 |
609 | P>L | No |
ClinGen Ensembl |
|
|
rs376050255 CA9265809 |
609 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs950616458 CA305795894 |
610 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA9265808 rs144064099 COSM144641 |
610 | T>M | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs950616458 CA404495025 |
610 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA404495005 rs1349891526 |
611 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA9265807 rs755337627 |
611 | D>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 613 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs375883591 CA9265806 |
613 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA305795860 rs1045858384 |
615 | A>V | No |
ClinGen Ensembl |
|
|
CA9265802 rs767626174 |
616 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9265803 rs200385214 |
616 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1213418255 CA404494926 |
617 | S>N | No |
ClinGen gnomAD |
|
|
CA404494909 rs1234503786 |
618 | D>G | No |
ClinGen gnomAD |
|
|
rs751777249 CA9265800 |
618 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA404494878 rs1294151965 |
620 | Q>* | No |
ClinGen gnomAD |
|
|
rs1599553338 CA404494865 |
621 | A>T | No |
ClinGen Ensembl |
|
|
rs1599553334 CA404494857 |
621 | A>V | No |
ClinGen Ensembl |
|
|
CA9265798 COSM709701 rs571638097 |
622 | E>K | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA404494852 rs571638097 |
622 | E>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs775222031 CA9265797 |
623 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs1044518760 CA305795815 |
630 | P>L | No |
ClinGen TOPMed |
|
|
rs1471310048 CA404494708 |
630 | P>S | No |
ClinGen Ensembl |
|
|
CA404494696 rs1568422044 |
631 | C>R | No |
ClinGen Ensembl |
|
|
CA404494683 rs1409813268 |
632 | G>R | No |
ClinGen Ensembl |
|
|
CA9265792 rs148784064 |
633 | T>M | No |
ClinGen ESP ExAC gnomAD |
|
|
rs148784064 CA404494668 |
633 | T>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs770469145 CA9265790 |
635 | H>P | No |
ClinGen ExAC gnomAD |
|
|
rs1160119484 CA404494634 |
636 | E>K | No |
ClinGen TOPMed |
|
| TCGA novel | 639 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9265788 rs777457097 |
639 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404494552 rs1392876105 |
641 | K>Q | No |
ClinGen TOPMed |
|
|
rs1193297378 CA404494526 |
643 | R>T | No |
ClinGen gnomAD |
|
|
rs1467408566 CA404494487 |
646 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1568422012 CA404494484 |
647 | A>T | No |
ClinGen Ensembl |
|
|
CA404494474 rs1599553265 |
647 | A>V | No |
ClinGen Ensembl |
|
|
CA9265787 rs771586432 |
648 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1214709424 CA404494450 |
649 | A>G | No |
ClinGen gnomAD |
|
|
rs1368833958 CA404494456 |
649 | A>T | No |
ClinGen TOPMed |
|
|
rs780508322 CA9265785 |
651 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA305795778 rs866119603 |
652 | G>V | No |
ClinGen Ensembl |
|
|
CA9265783 rs569129129 |
653 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA9265781 rs145418809 |
654 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA404494349 rs764405941 |
658 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9265779 rs764405941 |
658 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1387158337 CA404494345 |
659 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs763092973 CA9265778 |
660 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA305795765 rs947540357 |
661 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs752498693 CA9265777 |
662 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs752498693 CA404494304 |
662 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA404494276 rs1390931974 |
664 | Q>E | No |
ClinGen gnomAD |
|
| VAR_036534 | 664 | Q>H | a breast cancer sample; somatic mutation [UniProt] | No | UniProt |
|
rs1173249581 CA404494272 |
664 | Q>P | No |
ClinGen gnomAD |
|
|
CA404494261 rs1599553205 |
665 | T>P | No |
ClinGen Ensembl |
|
|
rs1397131057 CA404494247 |
666 | R>G | No |
ClinGen gnomAD |
|
|
CA9265775 rs369631726 |
666 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA404494225 rs1259154452 |
667 | V>G | No |
ClinGen gnomAD |
|
|
rs776598548 CA9265774 |
667 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs985785885 CA305795719 |
671 | P>A | No |
ClinGen Ensembl |
|
|
rs760265810 CA9265771 |
671 | P>L | No |
ClinGen ExAC |
|
|
rs1481319848 CA404494170 |
672 | A>V | No |
ClinGen gnomAD |
|
|
rs139907510 CA404494151 |
674 | A>S | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs139907510 CA9265767 |
674 | A>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA9265766 rs560315178 |
674 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA404494144 rs1369954322 |
675 | D>N | No |
ClinGen TOPMed |
|
|
CA404494091 rs1599553137 |
678 | V>G | No |
ClinGen Ensembl |
|
|
rs1305220315 CA404494100 |
678 | V>L | No |
ClinGen gnomAD |
|
|
CA404494055 rs1285760515 |
680 | Q>P | No |
ClinGen gnomAD |
|
|
rs201831883 CA9265764 |
682 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404494010 rs1233669054 |
682 | D>V | No |
ClinGen gnomAD |
|
|
rs768511127 CA9265763 |
683 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404493962 rs781734939 |
685 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781734939 CA9265762 |
685 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404493964 rs781734939 |
685 | S>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1599553099 CA404493948 |
686 | K>I | No |
ClinGen Ensembl |
|
|
CA9265758 rs758673111 |
688 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs749222352 CA9265759 |
688 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA9265757 rs145842466 |
689 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9265756 rs765056046 |
690 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA404493859 rs1315326512 |
691 | T>R | No |
ClinGen TOPMed |
No associated diseases with O43823
3 regional properties for O43823
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| conserved_site | Aldo/keto reductase, conserved site | 143 - 160 | IPR018170-1 |
| conserved_site | Aldo/keto reductase, conserved site | 254 - 269 | IPR018170-2 |
| domain | NADP-dependent oxidoreductase domain | 20 - 286 | IPR023210 |
Functions
9 GO annotations of cellular component
| Name | Definition |
|---|---|
| condensed chromosome | A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure. |
| female pronucleus | The pronucleus originating from the ovum that is being fertilized. |
| Golgi apparatus | A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
| nuclear matrix | The dense fibrillar network lying on the inner side of the nuclear membrane. |
| nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
6 GO annotations of molecular function
| Name | Definition |
|---|---|
| double-stranded DNA binding | Binding to double-stranded DNA. |
| histone deacetylase binding | Binding to histone deacetylase. |
| NF-kappaB binding | Binding to NF-kappaB, a transcription factor for eukaryotic RNA polymerase II promoters. |
| protein kinase A regulatory subunit binding | Binding to one or both of the regulatory subunits of protein kinase A. |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
| zinc ion binding | Binding to a zinc ion (Zn). |
10 GO annotations of biological process
| Name | Definition |
|---|---|
| cell cycle G2/M phase transition | The cell cycle process by which a cell in G2 phase commits to M phase. |
| cellular response to lipopolysaccharide | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria. |
| cellular response to prostaglandin E stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin E stimulus. |
| innate immune response | Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens. |
| mitotic cell cycle | Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent. |
| mitotic chromosome condensation | The cell cycle process in which chromatin structure is compacted prior to and during mitosis in eukaryotic cells. |
| negative regulation of tumor necrosis factor production | Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production. |
| positive regulation of histone deacetylation | Any process that activates or increases the frequency, rate or extent of the removal of acetyl groups from histones. |
| protein transport | The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MDQGYGGYGA | WSAGPANTQG | AYGTGVASWQ | GYENYNYYGA | QNTSVTTGAT | YSYGPASWEA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| AKANDGGLAA | GAPAMHMASY | GPEPCTDNSD | SLIAKINQRL | DMMSKEGGRG | GSGGGGEGIQ |
| 130 | 140 | 150 | 160 | 170 | 180 |
| DRESSFRFQP | FESYDSRPCL | PEHNPYRPSY | SYDYEFDLGS | DRNGSFGGQY | SECRDPARER |
| 190 | 200 | 210 | 220 | 230 | 240 |
| GSLDGFMRGR | GQGRFQDRSN | PGTFMRSDPF | VPPAASSEPL | STPWNELNYV | GGRGLGGPSP |
| 250 | 260 | 270 | 280 | 290 | 300 |
| SRPPPSLFSQ | SMAPDYGVMG | MQGAGGYDST | MPYGCGRSQP | RMRDRDRPKR | RGFDRFGPDG |
| 310 | 320 | 330 | 340 | 350 | 360 |
| TGRKRKQFQL | YEEPDTKLAR | VDSEGDFSEN | DDAAGDFRSG | DEEFKGEDEL | CDSGRQRGEK |
| 370 | 380 | 390 | 400 | 410 | 420 |
| EDEDEDVKKR | REKQRRRDRT | RDRAADRIQF | ACSVCKFRSF | DDEEIQKHLQ | SKFHKETLRF |
| 430 | 440 | 450 | 460 | 470 | 480 |
| ISTKLPDKTV | EFLQEYIVNR | NKKIEKRRQE | LMEKETAKPK | PDPFKGIGQE | HFFKKIEAAH |
| 490 | 500 | 510 | 520 | 530 | 540 |
| CLACDMLIPA | QPQLLQRHLH | SVDHNHNRRL | AAEQFKKTSL | HVAKSVLNNR | HIVKMLEKYL |
| 550 | 560 | 570 | 580 | 590 | 600 |
| KGEDPFTSET | VDPEMEGDDN | LGGEDKKETP | EEVAADVLAE | VITAAVRAVD | GEGAPAPESS |
| 610 | 620 | 630 | 640 | 650 | 660 |
| GEPAEDEGPT | DTAEAGSDPQ | AEQLLEEQVP | CGTAHEKGVP | KARSEAAEAG | NGAETMAAEA |
| 670 | 680 | 690 | |||
| ESAQTRVAPA | PAAADAEVEQ | TDAESKDAVP | TE |