O43148
Gene name |
RNMT (KIAA0398) |
Protein name |
mRNA cap guanine-N7 methyltransferase |
Names |
RG7MT1, mRNA (guanine-N(7))-methyltransferase, mRNA cap methyltransferase, hCMT1, hMet, hcm1p |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:8731 |
EC number |
2.1.1.56: Methyltransferases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
353 variants for O43148
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA8901735 rs199768817 |
2 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1170731019 CA401978513 |
7 | A>V | No |
ClinGen gnomAD |
|
|
CA401978531 rs1464108646 |
9 | E>* | No |
ClinGen gnomAD |
|
|
rs61730998 CA8901737 |
10 | Y>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA401978562 rs1406712938 |
11 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA296787406 rs1014433126 |
12 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1361041184 CA401978590 |
13 | M>K | No |
ClinGen gnomAD |
|
|
CA401978613 rs1035919752 |
14 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1035919752 CA296787408 |
14 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
CA401978604 rs1340625852 |
14 | S>T | No |
ClinGen gnomAD |
|
|
rs560888117 CA296787409 |
15 | L>F | No |
ClinGen TOPMed |
|
|
CA401978619 rs560888117 |
15 | L>V | No |
ClinGen TOPMed |
|
|
CA401978634 rs1601993145 |
16 | E>Q | No |
ClinGen Ensembl |
|
|
rs1361951738 CA401978650 |
17 | Q>K | No |
ClinGen TOPMed |
|
|
CA296787427 rs765341402 |
18 | A>E | No |
ClinGen Ensembl |
|
|
CA296787417 rs865852051 |
18 | A>T | No |
ClinGen Ensembl |
|
|
rs201562560 CA8901738 |
19 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8901739 rs61730997 |
20 | A>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8901740 rs61730997 |
20 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8901741 rs772399725 |
20 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA8901743 rs747122646 |
21 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs115821778 CA8901745 |
22 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA296787514 rs1013236562 |
27 | E>G | No |
ClinGen TOPMed |
|
|
rs759780550 CA8901748 |
28 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA8901749 rs114951540 |
31 | N>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs114951540 CA401978897 |
31 | N>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA401978918 rs1431149770 |
32 | I>T | No |
ClinGen gnomAD |
|
|
CA401978940 rs1290432114 |
33 | N>S | No |
ClinGen TOPMed |
|
|
rs1229840354 CA401978968 |
35 | N>D | No |
ClinGen TOPMed |
|
|
rs1429441267 CA401979000 |
36 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA401978991 rs1247530781 |
36 | T>S | No |
ClinGen gnomAD |
|
|
CA8901752 rs201592442 |
37 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1300820580 CA401979024 |
38 | A>S | No |
ClinGen TOPMed |
|
| TCGA novel | 39 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8901754 rs201601149 |
40 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201601149 CA8901753 |
40 | G>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1203586924 CA401979058 |
41 | T>I | No |
ClinGen gnomAD |
|
|
rs1265558032 CA401979062 |
42 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs958021329 CA296787571 |
43 | L>F | No |
ClinGen TOPMed |
|
| TCGA novel | 44 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs141701841 CA8901756 |
45 | E>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA401979103 rs1404608014 |
46 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA401979116 rs1488671970 |
47 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs138155222 CA401979118 |
47 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1488671970 CA401979114 |
47 | T>P | No |
ClinGen TOPMed gnomAD |
|
|
CA8901757 rs138155222 |
47 | T>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8901758 rs549814394 |
49 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs149130238 CA8901759 CA296787630 |
51 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401979191 rs1317836620 COSM181273 |
54 | D>G | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA8901761 rs778181249 |
55 | I>K | No |
ClinGen ExAC gnomAD |
|
|
rs1218369029 CA401979200 |
55 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA401979221 rs1362975393 |
56 | A>G | No |
ClinGen gnomAD |
|
| TCGA novel | 56 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA296787634 rs964553994 |
56 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs747492929 CA8901762 |
57 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs974550566 CA296787653 |
57 | R>K | No |
ClinGen TOPMed |
|
|
rs1268930037 CA401979247 |
59 | R>G | No |
ClinGen gnomAD |
|
|
rs199889022 CA296787659 |
62 | F>C | No |
ClinGen TOPMed gnomAD |
|
|
CA401979318 rs1156790988 |
64 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA401979341 CA401979343 rs1401284214 |
65 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA401979331 rs1407151406 |
65 | D>Y | No |
ClinGen gnomAD |
|
|
CA296787680 rs771154316 |
66 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8901763 rs771154316 |
66 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1404509650 CA401979354 |
67 | V>I | No |
ClinGen gnomAD |
|
|
rs776808773 CA8901764 |
69 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401979404 rs746089526 |
71 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs112590484 CA296787713 |
71 | S>P | No |
ClinGen Ensembl |
|
|
COSM3422069 rs746089526 CA8901765 |
71 | S>Y | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1601993845 CA401979411 |
72 | S>G | No |
ClinGen Ensembl |
|
|
rs770201986 CA8901767 |
73 | C>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401979441 rs1601993886 |
74 | G>V | No |
ClinGen Ensembl |
|
|
rs775780770 CA8901768 |
76 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767325569 CA8901771 |
78 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs767325569 CA8901770 |
78 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA8901772 rs760567801 |
80 | K>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA401979503 rs1304555949 |
80 | K>R | No |
ClinGen Ensembl |
|
|
CA8901773 rs765878703 |
81 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA401979541 rs1377705899 |
83 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs752664406 CA296787759 |
84 | L>R | No |
ClinGen Ensembl |
|
|
CA401979565 rs563132015 |
85 | D>E | No |
ClinGen 1000Genomes gnomAD |
|
|
rs753289452 CA8901774 |
86 | P>T | No |
ClinGen ExAC |
|
|
rs759032673 CA8901775 |
88 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1398286427 CA401979614 |
90 | P>A | No |
ClinGen gnomAD |
|
|
rs1801762 CA296787814 |
93 | K>E | No |
ClinGen gnomAD |
|
|
rs1313935398 CA401979693 |
96 | G>D | No |
ClinGen gnomAD |
|
|
CA8901777 rs533704344 |
100 | G>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8901778 rs758737914 |
103 | K>E | No |
ClinGen ExAC |
|
|
rs778146831 CA8901779 |
105 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA8901780 rs143290824 |
107 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA401979820 rs1355210194 |
107 | R>I | No |
ClinGen gnomAD |
|
|
rs983509441 CA296787863 |
110 | E>D | No |
ClinGen gnomAD |
|
|
rs781431960 CA8901782 |
111 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA8901781 rs757768815 |
111 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA8901784 rs769888601 |
113 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA401979882 rs769888601 |
113 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1206451106 CA401979943 |
118 | S>P | No |
ClinGen gnomAD |
|
|
rs1443995858 CA401979952 |
119 | T>A | No |
ClinGen gnomAD |
|
|
CA401979961 rs1183963381 |
119 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA401979959 rs1183963381 |
119 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA8901786 rs749481566 |
121 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8901787 rs771795058 |
122 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1406705076 CA401979991 |
122 | G>R | No |
ClinGen Ensembl |
|
|
rs907869437 CA296787908 |
123 | T>A | No |
ClinGen Ensembl |
|
|
rs1167591189 CA401980016 |
124 | Q>* | No |
ClinGen gnomAD |
|
|
CA296787914 rs368041400 |
129 | I>T | No |
ClinGen ESP TOPMed |
|
|
rs772993668 CA8901788 |
129 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA296787917 rs920718923 |
130 | A>T | No |
ClinGen TOPMed |
|
|
CA296787918 rs942005899 |
132 | E>Q | No |
ClinGen Ensembl |
|
|
CA8901789 rs371607738 |
133 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA296787938 rs868206894 |
135 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1454022674 CA401980154 |
136 | E>* | No |
ClinGen gnomAD |
|
|
rs776544194 CA8901791 |
138 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1363489073 CA401980203 |
139 | K>E | No |
ClinGen gnomAD |
|
|
CA401980531 rs1204331665 |
140 | N>H | No |
ClinGen gnomAD |
|
|
rs774993545 CA8901816 |
142 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs763861467 CA8901818 |
144 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA401980575 rs1479452329 |
144 | G>R | No |
ClinGen TOPMed |
|
|
CA401980581 rs763861467 |
144 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs866209357 CA296791102 |
145 | H>Q | No |
ClinGen TOPMed |
|
|
rs767949084 CA8901821 |
151 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA401980699 rs751001553 |
152 | H>P | No |
ClinGen ExAC gnomAD |
|
|
CA8901822 rs751001553 |
152 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs756578039 CA8901823 |
153 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs766382597 CA8901824 |
154 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401980780 rs1387654706 |
156 | L>P | No |
ClinGen gnomAD |
|
|
rs755009756 CA8901826 |
159 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755009756 CA296791155 |
159 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401980849 rs1300910058 |
160 | G>V | No |
ClinGen gnomAD |
|
|
CA8901828 rs748346138 |
164 | R>H | Variant assessed as Somatic; 0.0001386 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA401980945 rs1333879752 |
166 | Q>* | No |
ClinGen gnomAD |
|
|
rs530734654 CA8901829 |
166 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs948255458 CA296791177 |
168 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
CA8901830 rs367704299 |
168 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA776336867 rs1371381439 |
171 | Y>* | No |
ClinGen TOPMed |
|
|
rs1490590707 CA401981030 |
171 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1183191331 CA401981120 |
176 | N>D | No |
ClinGen gnomAD |
|
|
rs866015528 CA296791253 |
178 | W>* | No |
ClinGen Ensembl |
|
|
CA8901832 rs769711837 |
178 | W>R | No |
ClinGen ExAC |
|
|
CA8901833 rs775274217 |
179 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 183 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401981184 rs1443181735 |
183 | L>V | No |
ClinGen gnomAD |
|
|
CA401981193 rs1311042781 |
184 | I>T | No |
ClinGen TOPMed |
|
|
rs773935531 CA8901853 |
190 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401981885 rs1389817891 |
191 | V>I | No |
ClinGen TOPMed |
|
|
CA8901854 rs747817395 |
192 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs771908667 CA8901855 |
192 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8901857 rs115527371 |
193 | Q>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA401981920 rs1253189207 |
194 | K>* | No |
ClinGen gnomAD |
|
|
rs1460356358 CA401981928 |
194 | K>M | No |
ClinGen gnomAD |
|
|
rs771175945 CA8901858 |
195 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA401981943 rs1190610345 |
195 | K>N | No |
ClinGen TOPMed |
|
|
rs777214936 CA8901859 |
196 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs554159794 CA8901860 |
197 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765305190 CA401981965 |
197 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765305190 CA8901861 COSM372881 |
197 | R>L | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs114980013 CA296793000 |
198 | D>G | No |
ClinGen 1000Genomes TOPMed |
|
|
rs763004358 CA8901863 |
199 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1170493178 CA401982023 |
202 | L>V | No |
ClinGen gnomAD |
|
|
CA401982075 rs1468121418 |
206 | C>G | No |
ClinGen gnomAD |
|
|
rs1274929549 CA401982123 |
210 | G>R | No |
ClinGen TOPMed |
|
| TCGA novel | 211 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs755962149 CA8901866 |
219 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs779678503 CA8901867 |
220 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA401982276 rs1229079417 |
221 | N>T | No |
ClinGen TOPMed |
|
|
rs753821778 CA8901868 |
222 | K>* | No |
ClinGen ExAC gnomAD |
|
|
CA8901869 rs754906739 |
222 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA8901872 rs778981196 |
224 | V>F | No |
ClinGen ExAC gnomAD |
|
|
COSM223927 CA401982298 rs778981196 |
224 | V>I | skin [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA401982307 rs1214081086 |
225 | C>S | No |
ClinGen gnomAD |
|
|
rs1310003078 CA401982315 |
226 | T>S | No |
ClinGen TOPMed |
|
|
CA8901891 rs758001810 |
227 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs747729376 CA8901873 |
227 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs746677748 CA8901893 |
228 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA8901892 rs561383779 |
228 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs780880923 CA8901895 |
230 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746296039 CA8901896 |
231 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs776001269 CA8901898 |
233 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1438601973 CA401982493 |
239 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs768789789 CA8901901 |
239 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA296795725 rs373921702 |
240 | Y>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8901902 rs373921702 |
240 | Y>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8901903 rs761939929 |
241 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401982529 rs1421428832 |
241 | E>G | No |
ClinGen TOPMed |
|
|
rs1180239436 CA401982524 |
241 | E>K | No |
ClinGen gnomAD |
|
| TCGA novel | 241 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401982541 rs1292014052 |
242 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs114235607 CA8901904 |
243 | M>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM1711006 rs375847538 CA8901905 |
246 | R>C | skin [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs375847538 CA401982653 |
246 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM181275 CA8901906 rs759454627 |
246 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA8901907 rs116111155 |
247 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs752711714 CA8901908 |
247 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs202093575 CA8901909 |
249 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763674156 CA8901910 |
249 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA401982763 rs1310040118 |
252 | I>T | No |
ClinGen TOPMed |
|
|
rs1335085496 CA401982795 |
254 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
rs751084319 CA8901911 |
254 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401982794 rs1335085496 |
254 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs991835042 CA296795771 |
258 | I>V | No |
ClinGen Ensembl |
|
|
CA401982961 rs1358104721 |
262 | S>T | No |
ClinGen gnomAD |
|
|
rs1192789237 CA401983609 |
266 | L>R | No |
ClinGen gnomAD |
|
|
CA8901933 rs750084052 |
266 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs116831898 CA8901935 |
268 | I>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs749682519 CA8901936 |
270 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM986757 rs779338611 CA8901938 |
272 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs576605287 CA8901939 |
272 | R>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1398550073 CA401983746 |
273 | D>G | No |
ClinGen gnomAD |
|
|
rs763498569 CA296796964 |
274 | P>S | No |
ClinGen Ensembl |
|
|
rs1353078026 CA401983774 |
275 | Q>E | No |
ClinGen TOPMed |
|
|
CA296796965 rs931588850 |
275 | Q>R | No |
ClinGen Ensembl |
|
|
rs777931696 CA8901941 |
277 | C>W | No |
ClinGen ExAC |
|
| TCGA novel | 282 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 285 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs190647591 CA8901942 |
287 | C>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8901943 rs771336224 |
290 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA401984052 rs1420793689 |
294 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs768472917 CA401984072 |
297 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs768472917 CA8901946 |
297 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs116730904 CA296796994 |
297 | A>V | No |
ClinGen 1000Genomes gnomAD |
|
|
CA8901948 rs761745817 |
298 | D>A | No |
ClinGen ExAC gnomAD |
|
|
CA401984092 rs1268327133 |
300 | M>L | No |
ClinGen gnomAD |
|
|
rs1434208169 CA401984102 |
301 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
CA401984104 rs1201682651 |
301 | L>P | No |
ClinGen gnomAD |
|
|
rs1434208169 CA401984101 |
301 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs767030559 CA8901949 |
302 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs749997624 CA8901950 |
304 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA8901952 rs766060545 |
305 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1398911757 CA401984142 |
307 | R>K | No |
ClinGen TOPMed |
|
|
CA296797061 rs866134592 |
311 | G>E | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 311 | G>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1300690151 CA401984176 |
312 | G>A | No |
ClinGen gnomAD |
|
|
CA8901955 rs753507842 |
313 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8901954 rs753507842 |
313 | Y>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8901956 rs779298591 |
315 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753147610 CA8901957 |
317 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA401984213 rs758917066 |
318 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8901958 rs758917066 |
318 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401984224 rs1356090650 |
320 | N>S | No |
ClinGen gnomAD |
|
|
rs934008833 CA296797098 |
322 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA401984277 rs1247080310 |
326 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
COSM3388367 CA296797796 rs780942591 |
327 | R>C | pancreas Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
CA8901970 rs760230752 |
327 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA401984293 rs1233581995 |
328 | L>R | No |
ClinGen TOPMed |
|
|
rs1199857910 CA401984333 |
334 | E>V | No |
ClinGen gnomAD |
|
|
CA8901972 rs1371640815 |
337 | G>R | No |
ClinGen TOPMed |
|
| TCGA novel | 339 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401984375 rs1240341017 |
340 | I>T | No |
ClinGen gnomAD |
|
| TCGA novel | 341 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs753466668 CA8901974 |
341 | Y>H | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 342 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1437433134 CA401984427 |
347 | K>N | No |
ClinGen gnomAD |
|
|
rs759159864 CA8901975 |
347 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs370514852 CA8901976 |
349 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401984445 rs1370862361 |
350 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA296797841 rs373629247 |
350 | D>N | No |
ClinGen ESP |
|
| TCGA novel | 350 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1298429754 CA401984478 |
355 | G>R | No |
ClinGen TOPMed |
|
|
rs1465004848 CA401984489 |
356 | C>* | No |
ClinGen gnomAD |
|
|
CA401984493 rs1373192777 COSM986758 |
357 | K>E | endometrium [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs1171309133 CA401984495 |
357 | K>R | No |
ClinGen gnomAD |
|
|
CA296797858 rs947277535 |
358 | Y>* | No |
ClinGen TOPMed |
|
|
rs1338564274 CA401984503 |
358 | Y>C | No |
ClinGen gnomAD |
|
|
rs753160301 CA8901978 |
359 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8901979 rs758827042 |
361 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA401984539 CA8901980 rs778464114 |
362 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA401984546 rs1401871062 |
363 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA401984544 rs1401871062 |
363 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1380123006 CA401984569 |
364 | G>V | No |
ClinGen gnomAD |
|
|
rs1398058034 CA401984580 |
365 | V>G | No |
ClinGen gnomAD |
|
|
CA296797898 rs1043282098 |
367 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA296797903 rs79252026 |
368 | V>G | No |
ClinGen Ensembl |
|
|
CA401984615 rs1178086686 |
368 | V>L | No |
ClinGen TOPMed |
|
|
CA401984626 rs1260534692 |
369 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs781289611 CA8901983 |
374 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA401984723 rs1483342232 |
375 | F>L | No |
ClinGen gnomAD |
|
|
CA8901984 rs746094042 |
375 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
CA401984726 rs1183273934 |
376 | P>A | No |
ClinGen gnomAD |
|
|
CA8901987 rs747978145 |
377 | L>S | No |
ClinGen ExAC gnomAD |
|
|
CA8902007 rs757770486 |
383 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs767899070 CA8902008 |
387 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1264610892 CA401985446 |
391 | Y>* | No |
ClinGen gnomAD |
|
| rs1193666998 | 391 | Y>* | No | gnomAD | |
|
rs1294648475 CA401985451 |
392 | K>R | No |
ClinGen gnomAD |
|
| rs1436309196 | 394 | T>H | Variant assessed as Somatic; 4.689e-05 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8902010 rs756116618 |
395 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780376408 CA8902011 |
397 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749466878 CA296801679 |
398 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8902013 rs758223882 |
399 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA8902015 rs746959876 |
400 | E>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 401 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1489445655 CA401985513 |
401 | E>G | No |
ClinGen gnomAD |
|
|
CA401985517 rs1175240912 |
402 | K>* | No |
ClinGen gnomAD |
|
|
CA8902016 rs770957267 |
403 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776424781 CA8902017 |
403 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs150685617 CA296801747 |
403 | I>T | No |
ClinGen ESP gnomAD |
|
|
rs770957267 CA296801728 |
403 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs911942319 CA296801783 |
406 | N>S | No |
ClinGen Ensembl |
|
|
rs1239130836 CA401985557 |
407 | E>D | No |
ClinGen TOPMed |
|
|
rs1200767109 CA401985561 |
408 | N>H | No |
ClinGen TOPMed |
|
|
CA8902019 rs376815436 |
410 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs368467570 CA8902018 |
410 | M>T | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1404831805 CA401985576 |
410 | M>V | No |
ClinGen gnomAD |
|
| TCGA novel | 412 | L>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM255606 rs764556627 CA8902022 |
414 | R>* | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs774916614 CA8902023 |
414 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1036738186 CA296801805 |
415 | M>V | No |
ClinGen TOPMed |
|
|
CA296801832 rs899167531 |
417 | A>P | No |
ClinGen Ensembl |
|
|
rs899167531 CA296801844 |
417 | A>T | No |
ClinGen Ensembl |
|
|
CA296801881 rs985702261 |
417 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA8902026 rs768109426 |
419 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs544424412 CA296807756 |
420 | P>S | No |
ClinGen 1000Genomes |
|
|
CA296807764 rs1044504766 |
421 | Y>C | No |
ClinGen TOPMed |
|
|
CA8902051 rs752890849 |
421 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA8902052 rs139464798 |
422 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1360600544 CA401986784 |
423 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA401986777 rs1360600544 |
423 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA401986849 rs1277066203 |
426 | S>N | No |
ClinGen gnomAD |
|
|
CA401986881 rs1183512144 |
428 | K>E | No |
ClinGen TOPMed |
|
|
rs149656559 CA8902054 |
431 | S>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs533284511 CA8902055 |
431 | S>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs748848283 CA8902057 |
432 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1219975879 CA401987054 |
437 | Y>C | No |
ClinGen gnomAD |
|
|
rs987453120 CA296807779 |
439 | H>Y | No |
ClinGen Ensembl |
|
|
rs114363580 CA8902058 |
442 | K>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs891945637 CA296807793 |
444 | M>R | No |
ClinGen TOPMed |
|
|
CA401987177 rs1487453445 |
444 | M>V | No |
ClinGen gnomAD |
|
|
rs778731625 CA8902059 |
445 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401987217 rs778731625 |
445 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401987273 rs1207259095 |
447 | S>R | No |
ClinGen TOPMed |
|
|
rs1442392838 CA401987282 |
448 | Q>* | No |
ClinGen gnomAD |
|
|
rs1568512726 CA401987287 |
448 | Q>R | No |
ClinGen Ensembl |
|
|
CA8902061 rs772494092 |
450 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs199988857 CA8902060 |
450 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1377363727 CA401987349 |
452 | P>A | No |
ClinGen gnomAD |
|
|
CA401988087 rs1374387000 |
454 | G>R | No |
ClinGen gnomAD |
|
|
CA401988095 rs1264119312 |
455 | T>A | No |
ClinGen TOPMed |
|
|
CA8902078 rs754569928 |
455 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA401988116 rs1568514112 |
456 | L>F | No |
ClinGen Ensembl |
|
|
CA401988123 rs1310244170 |
457 | S>C | No |
ClinGen gnomAD |
|
|
rs919146348 CA296809245 |
459 | S>P | No |
ClinGen Ensembl |
|
|
rs1242662521 CA401988164 |
460 | E>K | No |
ClinGen gnomAD |
|
|
CA8902079 rs778504769 |
462 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1212188233 CA401988210 |
463 | A>G | No |
ClinGen gnomAD |
|
|
rs1014020737 CA296809270 |
464 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA401988219 rs1457610630 |
464 | T>I | No |
ClinGen gnomAD |
|
|
CA296809283 rs929242981 |
465 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
rs760569010 CA8902094 |
466 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401988637 rs1423871385 |
468 | L>M | No |
ClinGen gnomAD |
|
|
rs1421348235 CA401988655 |
469 | V>E | No |
ClinGen gnomAD |
|
|
CA401988653 rs1052337925 |
469 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA296813970 rs1052337925 |
469 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA401988743 rs1171067872 |
475 | Q>R | No |
ClinGen gnomAD |
|
|
CA401988780 rs1356096833 |
477 | Q>W | No |
ClinGen gnomAD |
No associated diseases with O43148
1 regional properties for O43148
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | mRNA (guanine-N(7))-methyltransferase domain | 128 - 476 | IPR004971 |
Functions
| Description | ||
|---|---|---|
| EC Number | 2.1.1.56 | Methyltransferases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| fibrillar center | A structure found most metazoan nucleoli, but not usually found in lower eukaryotes; surrounded by the dense fibrillar component; the zone of transcription from multiple copies of the pre-rRNA genes is in the border region between these two structures. |
| mRNA cap binding complex | Any protein complex that binds to an mRNA cap at any time in the lifetime of the mRNA. |
| mRNA cap methyltransferase complex | A protein complex that consists of an RNA 5' triphosphatase and a guanyl transferase (Cet1p and Ceg1p in S. cerevisiae; Pct1 and Ceg1 in S. pombe) and is involved in mRNA capping. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| receptor complex | Any protein complex that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| mRNA (guanine-N7-)-methyltransferase activity | Catalysis of the reaction: S-adenosyl-L-methionine + G(5')pppR-RNA = S-adenosyl-L-homocysteine + m7G(5')pppR-RNA. m7G(5')pppR-RNA is mRNA containing an N7-methylguanine cap; R may be guanosine or adenosine. |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| 7-methylguanosine mRNA capping | Addition of the 7-methylguanosine cap to the 5' end of a nascent messenger RNA transcript. |
| cellular response to leukemia inhibitory factor | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leukemia inhibitory factor stimulus. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9LHQ7 | At3g20650 | mRNA cap guanine-N7 methyltransferase 1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MANSAKAEEY | EKMSLEQAKA | SVNSETESSF | NINENTTASG | TGLSEKTSVC | RQVDIARKRK |
| 70 | 80 | 90 | 100 | 110 | 120 |
| EFEDDLVKES | SSCGKDTPSK | KRKLDPEIVP | EEKDCGDAEG | NSKKRKRETE | DVPKDKSSTG |
| 130 | 140 | 150 | 160 | 170 | 180 |
| DGTQNKRKIA | LEDVPEKQKN | LEEGHSSTVA | AHYNELQEVG | LEKRSQSRIF | YLRNFNNWMK |
| 190 | 200 | 210 | 220 | 230 | 240 |
| SVLIGEFLEK | VRQKKKRDIT | VLDLGCGKGG | DLLKWKKGRI | NKLVCTDIAD | VSVKQCQQRY |
| 250 | 260 | 270 | 280 | 290 | 300 |
| EDMKNRRDSE | YIFSAEFITA | DSSKELLIDK | FRDPQMCFDI | CSCQFVCHYS | FESYEQADMM |
| 310 | 320 | 330 | 340 | 350 | 360 |
| LRNACERLSP | GGYFIGTTPN | SFELIRRLEA | SETESFGNEI | YTVKFQKKGD | YPLFGCKYDF |
| 370 | 380 | 390 | 400 | 410 | 420 |
| NLEGVVDVPE | FLVYFPLLNE | MAKKYNMKLV | YKKTFLEFYE | EKIKNNENKM | LLKRMQALEP |
| 430 | 440 | 450 | 460 | 470 | |
| YPANESSKLV | SEKVDDYEHA | AKYMKNSQVR | LPLGTLSKSE | WEATSIYLVF | AFEKQQ |