O15381
Gene name |
NVL |
Protein name |
Nuclear valosin-containing protein-like |
Names |
NVLp, Nuclear VCP-like protein |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:4931 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
3 structures for O15381
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 2X8A | X-ray | 260 A | A | 574-845 | PDB |
| 6RO1 | X-ray | 307 A | B | 167-216 | PDB |
| AF-O15381-F1 | Predicted | AlphaFoldDB |
618 variants for O15381
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA1414603 rs756422352 |
2 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA1414602 rs138268824 |
3 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1414601 rs138268824 |
3 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA38451292 rs917656646 |
3 | P>S | No |
ClinGen TOPMed |
|
|
CA344707095 rs1317948604 |
4 | R>G | No |
ClinGen gnomAD |
|
|
CA38451284 rs370596625 |
5 | P>L | No |
ClinGen ESP TOPMed |
|
|
CA1414599 rs532380126 |
6 | A>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1159208114 CA344707059 |
6 | A>V | No |
ClinGen gnomAD |
|
|
rs150333766 CA1414597 |
7 | G>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs150333766 CA1414598 |
7 | G>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs909775101 CA38451241 |
8 | F>L | No |
ClinGen gnomAD |
|
|
CA344707042 rs1156675515 |
8 | F>S | No |
ClinGen TOPMed |
|
|
CA38451254 rs909775101 |
8 | F>V | No |
ClinGen gnomAD |
|
|
rs1190594628 CA344707035 |
9 | V>L | No |
ClinGen gnomAD |
|
|
CA344707025 rs748035238 |
10 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771604854 CA1414592 |
10 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs772961167 CA1414594 |
10 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs772961167 CA1414593 |
10 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1261839979 CA344707017 |
11 | N>K | No |
ClinGen gnomAD |
|
|
rs866327679 CA38451221 |
13 | L>I | No |
ClinGen Ensembl |
|
|
CA1414590 rs778502158 |
13 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs185167238 CA1414589 |
14 | K>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
COSM3689376 rs749185581 CA1414588 |
16 | R>* | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1328424986 CA344706986 |
16 | R>P | No |
ClinGen gnomAD |
|
|
rs756301656 CA1414586 |
17 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA38451214 rs1010929637 |
18 | I>V | No |
ClinGen gnomAD |
|
|
CA1414584 rs781532764 |
19 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs757418898 CA1414583 |
19 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344723288 rs1212525865 |
22 | T>A | No |
ClinGen TOPMed |
|
| TCGA novel | 22 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1272024137 CA344723286 |
22 | T>N | No |
ClinGen TOPMed |
|
|
CA344723289 rs1212525865 |
22 | T>P | No |
ClinGen TOPMed |
|
|
CA1414567 rs746009895 |
23 | S>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 25 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1414566 rs781068530 |
28 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs1483889537 CA529124517 |
29 | Y>* | No |
ClinGen gnomAD |
|
|
CA344723232 rs1160783912 |
29 | Y>* | No |
ClinGen gnomAD |
|
|
rs374237316 CA1414565 |
32 | I>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs374237316 CA344723213 |
32 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1414564 rs201633430 |
34 | V>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1414563 rs201633430 |
34 | V>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1186110563 CA344723200 |
35 | L>V | No |
ClinGen gnomAD |
|
|
CA38487213 rs896029248 |
36 | A>V | No |
ClinGen gnomAD |
|
|
rs753042123 CA1414561 |
37 | S>A | No |
ClinGen ExAC gnomAD |
|
|
CA38487184 rs112715810 |
41 | R>G | No |
ClinGen Ensembl |
|
|
rs1476677736 CA344723153 |
42 | V>L | No |
ClinGen TOPMed |
|
|
rs1351033365 CA344722173 |
45 | I>V | No |
ClinGen gnomAD |
|
|
CA1414546 rs770877050 |
47 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs778022844 CA1414544 |
48 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs758609557 CA1414543 |
48 | G>V | No |
ClinGen ExAC gnomAD |
|
|
COSM904504 rs748581297 CA1414542 |
49 | R>* | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs541886599 CA38480817 |
49 | R>P | No |
ClinGen gnomAD |
|
|
rs541886599 CA344722128 |
49 | R>Q | No |
ClinGen gnomAD |
|
|
rs1553337362 CA1414540 |
52 | R>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA1414539 rs779188594 |
53 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA344722049 rs1402992829 |
56 | R>K | No |
ClinGen gnomAD |
|
|
rs755495436 CA1414538 |
57 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA1414536 rs766874055 |
59 | V>E | No |
ClinGen ExAC gnomAD |
|
|
CA1414537 COSM1491948 rs754254646 |
59 | V>I | kidney Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
| TCGA novel | 62 | V>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 62 | V>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA344721903 rs1256408419 |
66 | I>S | No |
ClinGen gnomAD |
|
|
rs188734539 CA1414523 |
66 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1383382504 CA344721866 |
69 | E>G | No |
ClinGen TOPMed |
|
|
CA1414521 rs748317809 |
71 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772289099 CA1414522 |
71 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1297312869 CA344721832 |
72 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
CA344721838 rs1463345676 |
72 | L>V | No |
ClinGen gnomAD |
|
|
CA38480673 rs148207074 |
73 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA |
|
CA38480675 rs952565194 |
73 | K>T | No |
ClinGen TOPMed |
|
| TCGA novel | 77 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1381422700 CA344721789 |
77 | E>Q | No |
ClinGen gnomAD |
|
|
CA1414520 rs200417559 |
80 | D>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1418925600 CA344721756 |
80 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs981941431 CA344721750 |
81 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
rs981941431 CA38480666 |
81 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA38480664 rs368763094 |
82 | H>Y | No |
ClinGen ESP TOPMed gnomAD |
|
| TCGA novel | 86 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs755334742 CA1414518 |
86 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749637734 CA1414517 |
87 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs1181796378 CA344721694 |
89 | Q>R | No |
ClinGen gnomAD |
|
|
rs973488620 CA38480626 |
90 | G>D | No |
ClinGen TOPMed |
|
|
rs756639255 CA1414515 |
92 | E>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 96 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs774408900 CA1414473 |
98 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1414472 COSM210128 rs768765566 |
99 | S>R | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA344720807 rs1216415436 |
100 | Y>S | No |
ClinGen Ensembl |
|
|
rs1443362172 CA344720766 |
103 | D>E | No |
ClinGen gnomAD |
|
|
CA344720771 rs1212813346 |
103 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA344720774 rs1159431356 |
103 | D>H | No |
ClinGen TOPMed |
|
|
rs141925881 CA1414471 |
104 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1414470 rs775738426 |
107 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs1203357561 CA344720724 |
107 | M>V | No |
ClinGen gnomAD |
|
|
CA344720702 rs1319760507 |
108 | E>D | No |
ClinGen TOPMed |
|
|
rs770158104 CA1414469 |
109 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs746204972 CA344720680 |
110 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1414468 rs746204972 |
110 | Y>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771554968 CA1414466 |
112 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs1015464671 CA38476425 |
113 | P>L | No |
ClinGen Ensembl |
|
|
CA38473830 rs915096910 |
116 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1240894569 CA344720129 |
119 | M>R | No |
ClinGen TOPMed |
|
|
rs1572027339 CA344720109 |
121 | S>G | No |
ClinGen Ensembl |
|
|
CA1414446 rs768250156 |
121 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344720074 rs1157532796 |
124 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
CA344720060 rs1473777774 |
125 | S>C | No |
ClinGen gnomAD |
|
|
rs1558341628 CA344720048 |
126 | L>F | No |
ClinGen Ensembl |
|
|
rs374945513 CA1414442 |
127 | Y>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377133784 CA1414443 |
127 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1414441 rs200984793 |
128 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344720034 rs149707008 |
128 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1414439 rs149707008 |
128 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM904501 CA1414440 rs200984793 |
128 | R>W | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs763909063 CA1414437 |
129 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA1414436 rs758554937 |
131 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs144983418 CA38473737 COSM110411 |
132 | P>L | skin [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs1378925555 CA344719991 |
133 | D>N | No |
ClinGen TOPMed |
|
|
CA1414435 rs200499785 |
135 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1414434 rs188779693 |
138 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1414433 rs759770026 |
139 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs1293700540 CA344719918 |
140 | E>D | No |
ClinGen gnomAD |
|
|
rs574344034 CA38473696 |
141 | M>I | No |
ClinGen Ensembl |
|
|
CA1414432 rs777150957 |
142 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA1414431 rs766803293 |
144 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761086616 CA1414430 |
144 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA344719861 rs1459271567 |
146 | T>A | No |
ClinGen gnomAD |
|
|
CA38473665 rs922621173 |
146 | T>S | No |
ClinGen TOPMed |
|
|
CA1414429 rs182870329 |
147 | T>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA344719842 rs1176123753 |
148 | S>Y | No |
ClinGen gnomAD |
|
|
CA344719832 rs1301808785 |
149 | S>* | No |
ClinGen TOPMed |
|
|
rs1397089571 CA344719822 |
150 | T>I | No |
ClinGen TOPMed |
|
|
rs772440453 CA1414428 |
151 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs61729123 CA1414426 |
152 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1414427 rs748891622 COSM904500 |
152 | R>W | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs745472011 CA1414424 |
153 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA38473652 rs780994203 |
155 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA1414423 rs780994203 |
155 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
CA1414422 rs757085359 |
156 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746760463 CA1414421 |
158 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs746760463 CA344719746 |
158 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs1304487044 CA344719737 |
159 | S>C | No |
ClinGen TOPMed |
|
|
rs866683945 CA38473636 |
161 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA1414418 rs752831124 |
164 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA344719689 rs1301583930 |
164 | T>S | No |
ClinGen gnomAD |
|
|
rs765354087 CA1414417 |
165 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA344719650 rs1299141965 |
168 | D>Y | No |
ClinGen gnomAD |
|
|
rs755275927 CA1414416 |
170 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA1414415 rs537722770 COSM212328 |
172 | G>E | pancreas breast [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA344719592 rs1464861745 |
173 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
CA1414413 rs761157002 |
179 | P>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 180 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs768070218 CA1414411 |
180 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs377757688 CA344719513 |
180 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs750744570 CA1414412 |
180 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA1414409 rs775003153 |
182 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA344719462 rs1198624552 |
184 | D>E | No |
ClinGen gnomAD |
|
|
CA344719468 rs1375953786 |
184 | D>H | No |
ClinGen gnomAD |
|
| TCGA novel | 184 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1484126860 CA344719457 |
185 | S>C | No |
ClinGen gnomAD |
|
|
CA344719453 rs1289262815 |
185 | S>N | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 187 | F>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA344719400 rs1572026279 |
189 | D>A | No |
ClinGen Ensembl |
|
|
CA344719402 rs1318610991 |
189 | D>Y | No |
ClinGen Ensembl |
|
|
rs1256348949 CA344719366 |
192 | C>Y | No |
ClinGen gnomAD |
|
|
CA344719335 rs1353665760 |
193 | E>V | No |
ClinGen gnomAD |
|
|
rs759014463 CA1414407 |
195 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs1276228183 CA344719293 |
195 | S>R | No |
ClinGen gnomAD |
|
|
rs1033454331 CA38473533 |
196 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA344719259 rs776316720 |
197 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1414406 rs776316720 |
197 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA344719257 rs776316720 |
197 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344719210 rs1381854775 |
200 | P>S | No |
ClinGen gnomAD |
|
|
CA1414403 rs35056350 |
201 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1558340615 CA344719135 |
204 | I>M | No |
ClinGen Ensembl |
|
|
rs35095827 CA1414402 |
204 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs777473962 CA38471022 |
206 | D>G | No |
ClinGen Ensembl |
|
|
rs746485148 CA1414382 |
206 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1158246270 CA344718929 |
209 | D>A | No |
ClinGen gnomAD |
|
|
CA344718933 rs1425971380 |
209 | D>Y | No |
ClinGen TOPMed |
|
|
rs1572016065 CA344718913 |
210 | S>C | No |
ClinGen Ensembl |
|
|
CA344718693 rs1471505454 COSM414609 |
211 | S>C | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA1414381 rs768706831 |
214 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1161204166 CA344718633 |
217 | M>V | No |
ClinGen TOPMed |
|
|
rs769271430 CA38471016 |
218 | K>Q | No |
ClinGen gnomAD |
|
|
CA1414379 rs780221566 |
219 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs185890200 CA1414380 |
219 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1414377 rs746035108 |
221 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1414376 rs201576372 |
222 | K>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs757609902 CA1414375 |
224 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA1414373 rs764652291 |
225 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA1414374 rs751909298 |
225 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs376072933 CA1414371 |
226 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1330729491 CA344718499 |
229 | K>E | No |
ClinGen gnomAD |
|
| TCGA novel | 230 | R>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 231 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1414370 rs372647069 |
233 | E>* | No |
ClinGen ESP ExAC gnomAD |
|
|
CA344718437 rs1319136880 |
234 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA1414369 rs138739288 |
234 | D>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1414368 rs772783443 |
235 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1558335979 CA344718420 |
235 | L>H | No |
ClinGen Ensembl |
|
|
rs1289761184 CA344718390 |
238 | V>A | No |
ClinGen TOPMed |
|
|
rs1232910689 CA344718355 |
242 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA344718331 rs1159618075 |
244 | A>P | No |
ClinGen gnomAD |
|
|
rs1477523323 CA344718321 |
245 | V>I | No |
ClinGen gnomAD |
|
|
CA1414365 rs774221127 |
246 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs116571578 CA344718294 |
247 | Q>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs116571578 CA1414363 |
247 | Q>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 248 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1208698117 CA344718283 |
248 | K>R | No |
ClinGen gnomAD |
|
|
CA344718175 rs1202437958 |
254 | G>E | No |
ClinGen gnomAD |
|
| TCGA novel | 255 | L>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA344718159 rs1274084265 |
256 | E>K | No |
ClinGen gnomAD |
|
|
CA38470747 rs960001855 |
258 | Q>H | No |
ClinGen Ensembl |
|
|
rs1226288965 CA344718121 |
258 | Q>L | No |
ClinGen gnomAD |
|
|
rs866184955 CA38470739 |
260 | S>F | No |
ClinGen Ensembl |
|
|
rs1367358147 CA344718103 |
260 | S>T | No |
ClinGen gnomAD |
|
|
CA344718085 rs1298274863 |
261 | N>S | No |
ClinGen gnomAD |
|
|
rs202032588 CA1414347 |
262 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA344718066 rs1335935887 |
263 | K>E | No |
ClinGen gnomAD |
|
|
CA1414345 rs762808272 |
266 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA1414342 rs746002412 |
269 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769757437 CA1414343 |
269 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs184833826 CA1414341 |
272 | M>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1414339 rs747186340 |
275 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1291976673 CA344717806 |
281 | L>F | No |
ClinGen gnomAD |
|
|
rs368159089 CA1414317 |
282 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM210127 CA1414316 rs772843150 |
285 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA1414315 rs143693597 |
285 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1414312 rs751101050 |
286 | H>L | No |
ClinGen ExAC gnomAD |
|
|
CA1414313 rs751101050 |
286 | H>P | No |
ClinGen ExAC gnomAD |
|
|
CA344717773 rs1350715412 |
286 | H>Y | No |
ClinGen gnomAD |
|
|
rs752448705 CA1414309 |
287 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1414310 rs758058823 |
287 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs759424711 CA1414307 |
290 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs146061915 CA1414306 |
292 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1408992791 CA344717704 |
294 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1408992791 CA344717706 |
294 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA1414303 rs12084919 VAR_048109 |
295 | V>I | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA344717676 rs776427245 |
297 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1414301 rs776427245 |
297 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1414300 rs375233840 |
298 | P>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA38469901 rs375233840 |
298 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA344717664 rs769102708 |
299 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1414298 rs769102708 |
299 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344717663 rs971565927 |
299 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA38469899 rs971565927 |
299 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs749592623 CA1414297 |
304 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1414295 rs770420360 |
307 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA344717527 rs1319053246 |
311 | K>M | No |
ClinGen gnomAD |
|
|
CA1414293 rs777361742 |
312 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs142913195 CA344717472 |
316 | H>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs142913195 CA1414292 |
316 | H>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 318 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1414289 rs754854441 |
318 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs546354933 CA1414288 |
320 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA38467590 rs762401653 |
322 | L>I | No |
ClinGen Ensembl |
|
|
rs1443089829 CA344716753 |
323 | D>A | No |
ClinGen gnomAD |
|
|
CA1414255 rs765659709 |
325 | P>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 325 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1319728218 CA344716707 |
326 | I>V | No |
ClinGen gnomAD |
|
|
CA344716685 rs1386803043 |
327 | L>S | No |
ClinGen gnomAD |
|
|
CA344716652 rs1473008331 |
329 | V>L | No |
ClinGen gnomAD |
|
|
CA1414254 rs759951346 |
330 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA1414253 rs201749970 |
331 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA38467560 rs572448581 |
332 | P>T | No |
ClinGen 1000Genomes |
|
|
rs768373064 CA1414249 |
334 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA344716548 rs1256903011 |
335 | V>A | No |
ClinGen gnomAD |
|
|
CA38467537 rs910098710 |
337 | G>R | No |
ClinGen TOPMed |
|
|
CA38467536 rs1028194574 |
338 | V>G | No |
ClinGen Ensembl |
|
|
rs1571999424 CA344716480 |
342 | S>A | No |
ClinGen Ensembl |
|
|
CA1414244 rs781255885 |
344 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1414245 rs138668303 |
344 | Q>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA1414243 rs757074799 |
349 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA344716387 rs1236589816 |
351 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1270632254 CA344715614 CA344715617 |
355 | S>* | No |
ClinGen TOPMed gnomAD |
|
|
CA1414219 rs146483979 |
357 | A>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1414221 rs777736808 |
357 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs146483979 CA1414220 |
357 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| VAR_015890 | 359 | C>G | No | UniProt | |
|
rs1333790659 CA344715580 |
359 | C>S | No |
ClinGen TOPMed gnomAD |
|
|
rs377450954 CA1414218 |
360 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA344715548 rs1369475240 |
361 | I>T | No |
ClinGen gnomAD |
|
|
rs754247655 CA1414216 |
363 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs766608109 CA1414215 |
366 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA344715465 rs1422275321 |
368 | A>T | No |
ClinGen gnomAD |
|
|
CA1414214 rs199859247 |
369 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs750938884 CA1414213 |
370 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs750938884 CA344715445 |
370 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs767995927 CA1414212 |
375 | V>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 379 | D>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1414210 rs774913075 |
382 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 388 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA344715213 rs1439595372 |
390 | T>A | No |
ClinGen gnomAD |
|
|
CA1414208 rs372427007 |
390 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA344715212 rs372427007 |
390 | T>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1191069104 CA344715204 |
391 | C>S | No |
ClinGen TOPMed |
|
|
rs776520900 CA1414207 |
393 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA344715182 rs1233586590 |
393 | D>V | No |
ClinGen gnomAD |
|
|
rs1349511072 CA344715177 |
394 | D>N | No |
ClinGen gnomAD |
|
|
rs757749584 CA1414192 |
400 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA1414193 rs768081420 |
400 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1571978801 CA344714881 |
401 | T>I | No |
ClinGen Ensembl |
|
|
rs1157253197 CA344714849 |
403 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs549802292 CA1414191 |
403 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1190698630 CA344714837 |
404 | V>G | No |
ClinGen gnomAD |
|
|
rs34631151 CA1414189 VAR_048110 |
404 | V>I | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs34631151 CA344714846 |
404 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs776169583 CA38458814 |
408 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776169583 CA1414188 |
408 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765996353 CA344714747 |
410 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs765996353 CA1414186 |
410 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA344714742 COSM904497 rs1467851571 |
411 | N>D | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA1414184 rs773133873 |
412 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA1414185 rs773133873 |
412 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA38458752 rs757319956 |
412 | R>L | No |
ClinGen TOPMed |
|
|
CA38458757 rs757319956 |
412 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs772190566 CA1414182 |
413 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA1414181 rs748073138 |
414 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA344714700 rs1465971407 |
415 | S>* | No |
ClinGen TOPMed |
|
|
CA1414178 rs201713614 |
416 | L>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1442248207 COSM1689909 CA344714677 |
417 | D>E | skin [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs376111723 CA1414177 |
422 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1414176 rs746278047 COSM246149 |
422 | R>H | prostate [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs746278047 CA1414175 |
422 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781514862 CA344714619 |
423 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1414174 rs781514862 |
423 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344714585 rs1396943068 |
426 | F>S | No |
ClinGen gnomAD |
|
| TCGA novel | 427 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA344714561 rs754458829 |
428 | R>* | No |
ClinGen ExAC gnomAD |
|
|
rs753321668 CA1414169 |
428 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344714507 rs1188061336 |
433 | G>R | No |
ClinGen gnomAD |
|
|
rs376103318 CA38458636 |
434 | I>V | No |
ClinGen ESP gnomAD |
|
|
rs1236565988 CA344714471 |
436 | D>E | No |
ClinGen gnomAD |
|
|
rs766011486 CA1414168 |
439 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA1414151 rs747315495 |
443 | I>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 444 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1394361154 CA344713916 |
444 | L>P | No |
ClinGen gnomAD |
|
|
rs972036348 CA38454758 |
447 | L>F | No |
ClinGen TOPMed |
|
|
rs1462431232 CA344713868 |
447 | L>S | No |
ClinGen gnomAD |
|
|
rs1393534744 CA344713816 |
450 | K>R | No |
ClinGen gnomAD |
|
|
CA1414149 rs747880576 |
451 | L>YV* | No |
ClinGen ExAC |
|
|
rs778254320 CA1414150 |
452 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758937157 CA1414147 |
454 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1180947943 CA344713759 |
454 | P>S | No |
ClinGen gnomAD |
|
|
rs753343821 CA1414146 |
455 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs779589900 CA344713744 |
455 | Q>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779589900 CA1414145 |
455 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755757900 COSM425421 CA1414144 |
456 | A>T | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA344713696 rs1212215529 |
458 | D>Y | No |
ClinGen gnomAD |
|
|
rs1337356203 CA344713654 |
460 | C>G | No |
ClinGen gnomAD |
|
|
CA344713629 rs1571961439 |
461 | H>R | No |
ClinGen Ensembl |
|
|
rs750125811 CA1414143 |
464 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1601700 rs746255336 CA1414142 |
465 | L>V | liver [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs761708058 CA1414141 |
466 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA1414140 rs751397692 |
468 | G>V | No |
ClinGen ExAC |
|
|
rs374779596 CA1414138 |
470 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA38454657 rs112890149 |
472 | A>S | No |
ClinGen Ensembl |
|
|
rs1344594414 CA344713463 |
472 | A>V | No |
ClinGen TOPMed |
|
|
CA344713451 rs1462841736 |
474 | L>I | No |
ClinGen gnomAD |
|
| TCGA novel | 474 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA344713439 rs1400408901 |
475 | M>V | No |
ClinGen TOPMed |
|
|
rs781353254 CA38454653 |
479 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
CA1414136 rs769948002 |
479 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1414137 rs769948002 |
479 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA1414135 rs759564036 |
481 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA344713346 rs1192249775 |
483 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
CA344713350 rs1252955686 |
483 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1254018411 CA344713324 |
484 | C>W | No |
ClinGen gnomAD |
|
|
CA1414132 rs199638209 |
484 | C>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs778183674 CA1414131 |
485 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs986157970 CA38454585 |
487 | N>D | No |
ClinGen gnomAD |
|
|
rs373000328 CA1414129 |
487 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 490 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1264798875 CA344713247 |
491 | M>I | No |
ClinGen TOPMed |
|
|
rs1370742074 COSM904495 CA344713206 |
495 | E>K | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1439050670 CA344713194 |
496 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
CA38454560 rs935967653 |
497 | Q>R | No |
ClinGen Ensembl |
|
|
rs139575589 CA1414127 |
501 | P>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs749890415 CA1414125 |
505 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1414123 rs781060160 |
507 | P>L | No |
ClinGen ExAC |
|
|
CA38454493 rs757511937 |
511 | V>F | No |
ClinGen Ensembl |
|
|
rs200066624 CA38454488 |
511 | V>G | No |
ClinGen TOPMed |
|
|
rs967997824 CA38454486 |
512 | Q>H | No |
ClinGen Ensembl |
|
|
CA1414121 rs751450518 |
515 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA1414120 rs141166869 |
515 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA344712906 rs1378661578 |
517 | G>E | No |
ClinGen gnomAD |
|
|
CA1414119 rs758088142 |
518 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765025745 CA1414117 |
520 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA1414116 rs201616896 |
521 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344712809 rs1485410085 |
524 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs766412688 CA1414092 |
530 | R>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 532 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs773501407 CA38453312 |
532 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773501407 CA1414090 |
532 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs202007160 CA1414089 |
534 | L>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1558308683 CA344712185 |
536 | R>S | No |
ClinGen Ensembl |
|
|
rs1328826678 CA344712128 |
541 | L>V | No |
ClinGen gnomAD |
|
|
rs368441092 CA1414088 |
543 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 544 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA344712051 rs932286844 |
546 | M>K | No |
ClinGen TOPMed gnomAD |
|
|
rs932286844 CA38453281 |
546 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
CA1414087 rs774568676 |
547 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs756362376 CA38453270 |
548 | G>R | No |
ClinGen Ensembl |
|
|
CA344712017 rs1461187720 |
549 | L>P | No |
ClinGen gnomAD |
|
|
rs769336839 CA1414086 |
550 | C>Y | No |
ClinGen ExAC |
|
|
CA1414085 rs143207798 |
551 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA344711968 rs1190268368 |
554 | N>D | No |
ClinGen gnomAD |
|
|
CA1414084 rs776100750 |
557 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1414082 rs746445908 |
560 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1279222448 CA344711853 |
564 | Q>P | No |
ClinGen gnomAD |
|
|
CA1414079 rs748032835 |
567 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA1414078 rs778654546 |
571 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA344711766 rs1228508966 |
572 | F>L | No |
ClinGen gnomAD |
|
|
rs1372068083 CA344711743 |
574 | T>A | No |
ClinGen gnomAD |
|
|
CA1414077 rs754945868 |
578 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs201811533 CA38453231 |
579 | T>I | No |
ClinGen Ensembl |
|
|
CA344711657 rs753800587 |
582 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344711663 rs1332580993 |
582 | D>N | No |
ClinGen gnomAD |
|
|
rs753800587 CA1414076 |
582 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1414075 rs779914340 |
588 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1414074 rs756226427 |
590 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs1406165211 CA344711516 |
592 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1408182002 CA344711508 |
593 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA344711482 rs1471178438 |
595 | M>I | No |
ClinGen gnomAD |
|
|
CA1414073 rs750469349 |
595 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1010228282 CA38453214 |
596 | A>T | No |
ClinGen TOPMed |
|
|
CA38453208 rs891825511 |
596 | A>V | No |
ClinGen TOPMed |
|
|
rs1283647706 CA344711457 |
597 | I>M | No |
ClinGen Ensembl |
|
|
CA1414051 rs751853764 |
599 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764354516 CA1414050 |
601 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763414115 CA1414049 |
602 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344711324 rs763414115 |
602 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753106429 CA1414048 |
602 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753106429 CA344711319 |
602 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344711325 rs763414115 |
602 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1312369652 CA344711309 |
603 | N>S | No |
ClinGen gnomAD |
|
|
CA1414046 rs759937562 |
604 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA344711294 rs1571949605 |
605 | D>N | No |
ClinGen Ensembl |
|
|
rs545701394 CA1414044 |
606 | Q>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA344711247 rs1473333807 |
608 | K>R | No |
ClinGen gnomAD |
|
|
CA344711237 rs1252087274 |
609 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA344711211 rs1265152083 |
611 | G>V | No |
ClinGen TOPMed |
|
|
CA344711206 rs1432560641 |
612 | L>S | No |
ClinGen TOPMed |
|
|
rs768296314 CA1414041 |
615 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA1414042 rs774002053 |
615 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1414040 rs749142618 |
618 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA344711126 rs1427598245 |
620 | L>V | No |
ClinGen TOPMed |
|
|
rs1307354834 CA344711091 |
623 | P>L | No |
ClinGen gnomAD |
|
|
rs556124314 CA344711094 |
623 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs556124314 CA1414038 |
623 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA38452046 rs375520661 |
625 | G>V | No |
ClinGen ESP |
|
|
CA1414037 rs745825009 |
626 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA344710996 rs1413031993 |
632 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1413031993 CA344710993 |
632 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs151245412 CA1414014 |
637 | N>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1414011 rs758732725 |
640 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA38449256 rs758732725 |
640 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777976394 CA1414012 |
640 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1414009 rs370519985 |
642 | N>D | No |
ClinGen ESP ExAC gnomAD |
|
|
rs755307913 CA1414008 |
642 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA1414006 rs147736516 |
644 | I>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1414005 rs147736516 |
644 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1240784406 CA344710554 |
645 | S>P | No |
ClinGen gnomAD |
|
|
CA344710542 rs1370053866 |
647 | K>E | No |
ClinGen gnomAD |
|
|
CA38449219 rs1036059304 |
647 | K>N | No |
ClinGen gnomAD |
|
|
rs1474985425 CA344710539 |
647 | K>R | No |
ClinGen TOPMed |
|
|
CA344710528 rs1458607832 |
649 | P>A | No |
ClinGen gnomAD |
|
| TCGA novel | 650 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1414004 rs144521437 |
653 | N>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 654 | M>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA344710465 rs1287872090 |
654 | M>T | No |
ClinGen gnomAD |
|
|
rs958523399 CA38446887 |
655 | Y>F | No |
ClinGen TOPMed |
|
|
CA38446885 rs868327976 |
659 | S>I | No |
ClinGen Ensembl |
|
|
rs759203303 CA1413980 |
661 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1413978 rs766307554 |
663 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA344708523 rs1278162011 |
663 | V>M | No |
ClinGen gnomAD |
|
|
rs760493438 CA1413977 |
664 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA38446861 rs1003745185 |
665 | Q>E | No |
ClinGen TOPMed |
|
| TCGA novel | 667 | F>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA38446839 rs183678662 |
669 | R>* | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs561323445 CA1413975 |
669 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs967421031 CA38446830 |
671 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs149269387 CA344708364 |
671 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA344708359 rs774470691 |
672 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1413973 rs774470691 |
672 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344708300 rs1305744982 |
675 | P>L | No |
ClinGen TOPMed |
|
|
CA344708298 rs1305744982 |
675 | P>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA344708292 rs1348506236 |
676 | C>R | No |
ClinGen TOPMed |
|
|
CA38446812 rs1009495118 |
678 | I>L | No |
ClinGen TOPMed |
|
|
rs1403464363 CA344708265 |
678 | I>T | No |
ClinGen gnomAD |
|
|
rs1167706235 COSM904492 CA344708256 |
679 | F>L | endometrium [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA1413971 rs369288815 |
683 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1389057103 CA344708182 COSM343558 |
684 | D>V | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA1413969 rs770159077 |
686 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs746165228 CA1413968 |
689 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA344708127 rs1189605352 |
689 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA38446800 rs1053830445 |
693 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
CA38446790 rs376797399 |
693 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1413966 rs376797399 |
693 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1413942 rs754525510 |
697 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA1413941 rs754525510 |
697 | A>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 699 | V>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1571890072 CA344707401 |
699 | V>I | No |
ClinGen Ensembl |
|
|
rs367715317 CA1413940 |
700 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA1413939 rs779916902 |
700 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA1413938 rs755811576 |
701 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs925878628 CA38442472 |
703 | N>S | No |
ClinGen Ensembl |
|
|
CA344707359 rs1192810693 |
706 | L>P | No |
ClinGen gnomAD |
|
|
rs1476892394 CA344707356 |
707 | T>P | No |
ClinGen gnomAD |
|
|
rs767454090 CA1413936 |
708 | E>D | No |
ClinGen ExAC |
|
|
CA1413934 rs751531560 |
709 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1413935 rs373578510 |
709 | M>L | No |
ClinGen ESP ExAC gnomAD |
|
|
CA1413933 rs763872322 |
710 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1445989914 CA344707332 |
710 | D>G | No |
ClinGen gnomAD |
|
|
rs1443346532 CA344707294 |
714 | A>V | No |
ClinGen TOPMed |
|
|
rs775536853 CA1413931 |
717 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344707261 rs1310576684 |
717 | Q>L | No |
ClinGen gnomAD |
|
|
rs759721857 CA1413929 |
718 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA344707251 rs1571889747 |
718 | V>G | No |
ClinGen Ensembl |
|
|
rs776791758 CA1413928 |
721 | M>R | No |
ClinGen ExAC gnomAD |
|
|
CA1413927 rs200199510 |
722 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs1326016816 CA344707200 |
722 | A>V | No |
ClinGen gnomAD |
|
|
rs1571889690 CA344707191 |
723 | A>G | No |
ClinGen Ensembl |
|
|
CA1413924 rs148245753 |
727 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA344707149 rs1487588569 |
727 | P>S | No |
ClinGen gnomAD |
|
|
rs1571889610 CA344707140 |
728 | D>H | No |
ClinGen Ensembl |
|
|
rs199771667 CA1413878 |
732 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA38476173 rs1055544851 |
737 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA344719180 rs1388135190 |
738 | G>C | No |
ClinGen gnomAD |
|
| rs765634292 | 745 | F>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1413873 rs199945670 |
746 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1413870 rs770658918 |
747 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs746674528 CA1413869 |
749 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1413867 rs571963590 |
750 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA1413866 rs571963590 |
750 | P>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 750 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1193067768 CA344719025 |
752 | A>T | No |
ClinGen gnomAD |
|
|
CA1413865 rs778885446 COSM1689908 |
754 | R>C | Variant assessed as Somatic; 0.0 impact. skin [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA1413864 rs754893559 |
754 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344719001 rs1571827435 |
756 | A>T | No |
ClinGen Ensembl |
|
|
rs753996402 CA1413863 |
757 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs779964708 CA1413862 |
760 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA344718934 rs1254039947 |
762 | T>S | No |
ClinGen gnomAD |
|
|
rs1464888347 CA344718910 |
763 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs781625478 CA1413840 |
765 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781625478 CA344716103 |
765 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1413841 rs745959835 |
765 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA1413839 rs752011815 |
769 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752011815 CA1413838 |
769 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758743396 CA1413836 |
770 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA344716045 rs764585473 |
770 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344716034 rs1366701836 |
771 | D>N | No |
ClinGen gnomAD |
|
|
rs753155888 CA1413835 |
772 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA344715999 rs1571769570 |
773 | D>E | No |
ClinGen Ensembl |
|
| TCGA novel | 773 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1413834 rs765707473 |
774 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1237329085 CA344715956 |
776 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA344715929 rs1196466408 |
778 | A>G | No |
ClinGen gnomAD |
|
|
CA1413833 rs76700603 |
779 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA344715864 rs1208775137 |
783 | L>F | No |
ClinGen gnomAD |
|
|
rs370357965 CA1413831 |
784 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1339155 rs761421541 CA1413830 |
784 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs773949630 CA1413829 |
788 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs768455674 CA1413828 |
789 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1476838416 CA344714893 |
790 | G>A | No |
ClinGen gnomAD |
|
|
CA344714897 rs1476838416 |
790 | G>V | No |
ClinGen gnomAD |
|
| TCGA novel | 791 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA344714823 rs763801026 |
793 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1413811 rs763801026 |
793 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA38463084 rs923136062 |
794 | S>A | No |
ClinGen Ensembl |
|
|
COSM1218126 CA344714734 rs201381012 |
798 | R>* | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC gnomAD |
|
rs201381012 CA1413809 |
798 | R>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1293784387 CA344714731 |
798 | R>Q | No |
ClinGen TOPMed |
|
|
rs562758967 CA38463049 |
802 | I>L | No |
ClinGen TOPMed |
|
|
CA38463044 rs562758967 |
802 | I>V | No |
ClinGen TOPMed |
|
| TCGA novel | 803 | C>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1413808 rs775337393 |
804 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs140573935 CA38463015 |
806 | R>G | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1558230340 CA344714607 |
807 | Q>* | No |
ClinGen Ensembl |
|
|
rs759550830 CA1413805 |
808 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA344714572 rs1285376212 |
809 | M>V | No |
ClinGen gnomAD |
|
|
rs751246154 CA1413804 |
814 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751246154 CA344714480 |
814 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344714469 rs1339930028 |
814 | S>T | No |
ClinGen gnomAD |
|
|
CA344714458 rs1448872445 |
815 | G>R | No |
ClinGen TOPMed |
|
|
CA1413784 rs372135543 |
819 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA344714009 rs1420913252 |
821 | L>I | No |
ClinGen gnomAD |
|
| TCGA novel | 821 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs748433468 CA1413782 |
822 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1272631309 CA344713985 |
823 | V>I | No |
ClinGen TOPMed |
|
|
CA1413781 rs199692832 |
825 | H>R | No |
ClinGen 1000Genomes ExAC |
|
|
CA344713815 rs1204633434 |
830 | E>A | No |
ClinGen gnomAD |
|
|
CA38461538 rs928344076 |
830 | E>D | No |
ClinGen TOPMed |
|
|
rs375107802 CA1413780 |
830 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA344713743 rs1256337532 |
833 | K>E | No |
ClinGen gnomAD |
|
|
CA1413779 rs749650801 |
833 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA344713664 rs1281858721 |
836 | R>K | No |
ClinGen gnomAD |
|
|
rs75579846 CA38461523 |
838 | S>F | No |
ClinGen Ensembl |
|
|
rs144005997 CA1413777 |
839 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs754651531 CA1413754 |
843 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA1413755 rs778682297 |
843 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs776139032 CA38458641 |
844 | Q>H | No |
ClinGen Ensembl |
|
|
CA1413753 rs753722096 |
845 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1419548017 CA344712911 |
846 | M>I | No |
ClinGen gnomAD |
|
|
rs535508556 CA38458626 |
847 | Y>D | No |
ClinGen ExAC gnomAD |
|
|
rs535508556 CA1413752 |
847 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA1413750 rs750385827 |
849 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs139070771 CA1413749 |
849 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1413751 rs750385827 |
849 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1413748 rs762013255 |
851 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1490854633 CA344712781 |
852 | E>* | No |
ClinGen gnomAD |
|
|
rs1490854633 CA344712783 |
852 | E>K | No |
ClinGen gnomAD |
|
|
rs41271483 CA38458599 |
853 | S>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA344712758 rs1351341855 |
853 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs41271483 CA1413747 |
853 | S>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1261263218 CA344712737 |
855 | S>I | No |
ClinGen TOPMed |
|
|
rs552984431 CA344712728 |
856 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
rs552984431 CA38458589 |
856 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA1413746 rs368763444 |
856 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
No associated diseases with O15381
9 regional properties for O15381
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | AAA+ ATPase domain | 297 - 436 | IPR003593-1 |
| domain | AAA+ ATPase domain | 614 - 750 | IPR003593-2 |
| domain | ATPase, AAA-type, core | 301 - 432 | IPR003959-1 |
| domain | ATPase, AAA-type, core | 618 - 747 | IPR003959-2 |
| conserved_site | ATPase, AAA-type, conserved site | 404 - 422 | IPR003960-1 |
| conserved_site | ATPase, AAA-type, conserved site | 718 - 736 | IPR003960-2 |
| domain | NVL2, nucleolin binding domain | 2 - 71 | IPR031996 |
| domain | AAA ATPase, AAA+ lid domain | 458 - 491 | IPR041569-1 |
| domain | AAA ATPase, AAA+ lid domain | 773 - 830 | IPR041569-2 |
5 GO annotations of cellular component
| Name | Definition |
|---|---|
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| telomerase holoenzyme complex | Telomerase is a ribonucleoprotein enzyme complex, with a minimal catalytic core composed of a catalytic reverse transcriptase subunit and an RNA subunit that provides the template for telomeric DNA addition. In vivo, the holoenzyme complex often contains additional subunits. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| ATP hydrolysis activity | Catalysis of the reaction: ATP + H2O = ADP + H+ phosphate. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient. |
| preribosome binding | Binding to a preribosome. |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
6 GO annotations of biological process
| Name | Definition |
|---|---|
| positive regulation of protein binding | Any process that activates or increases the frequency, rate or extent of protein binding. |
| positive regulation of telomerase activity | Any process that activates or increases the frequency, rate or extent of telomerase activity, the catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). |
| regulation of protein localization to nucleolus | Any process that modulates the frequency, rate or extent of protein localization to nucleolus. |
| ribosomal large subunit biogenesis | A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a large ribosomal subunit; includes transport to the sites of protein synthesis. |
| ribosome biogenesis | A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis. |
| rRNA processing | Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9DBY8 | Nvl | Nuclear valosin-containing protein-like | Mus musculus (Mouse) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MKPRPAGFVD | NKLKQRVIQY | LTSNKCGKYV | DIGVLASDLQ | RVYSIDYGRR | KRNAFRIQVE |
| 70 | 80 | 90 | 100 | 110 | 120 |
| KVFSIISSEK | ELKNLTELED | EHLAKRARQG | EEDNEYTESY | SDDDSSMEDY | PDPQSANHMN |
| 130 | 140 | 150 | 160 | 170 | 180 |
| SSLLSLYRKG | NPDSVSNTPE | MEQRETTSST | PRISSKTGSI | PLKTPAKDSE | GGWFIDKTPS |
| 190 | 200 | 210 | 220 | 230 | 240 |
| VKKDSFFLDL | SCEKSNPKKP | ITEIQDSKDS | SLLESDMKRK | GKLKNKGSKR | KKEDLQEVDG |
| 250 | 260 | 270 | 280 | 290 | 300 |
| EIEAVLQKKA | KARGLEFQIS | NVKFEDVGGN | DMTLKEVCKM | LIHMRHPEVY | HHLGVVPPRG |
| 310 | 320 | 330 | 340 | 350 | 360 |
| VLLHGPPGCG | KTLLAHAIAG | ELDLPILKVA | APEIVSGVSG | ESEQKLRELF | EQAVSNAPCI |
| 370 | 380 | 390 | 400 | 410 | 420 |
| IFIDEIDAIT | PKREVASKDM | ERRIVAQLLT | CMDDLNNVAA | TARVLVIGAT | NRPDSLDPAL |
| 430 | 440 | 450 | 460 | 470 | 480 |
| RRAGRFDREI | CLGIPDEASR | ERILQTLCRK | LRLPQAFDFC | HLAHLTPGFV | GADLMALCRE |
| 490 | 500 | 510 | 520 | 530 | 540 |
| AAMCAVNRVL | MKLQEQQKKN | PEMEDLPSKG | VQEERLGTEP | TSETQDELQR | LLGLLRDQDP |
| 550 | 560 | 570 | 580 | 590 | 600 |
| LSEEQMQGLC | IELNDFIVAL | SSVQPSAKRE | GFVTVPNVTW | ADIGALEDIR | EELTMAILAP |
| 610 | 620 | 630 | 640 | 650 | 660 |
| VRNPDQFKAL | GLVTPAGVLL | AGPPGCGKTL | LAKAVANESG | LNFISVKGPE | LLNMYVGESE |
| 670 | 680 | 690 | 700 | 710 | 720 |
| RAVRQVFQRA | KNSAPCVIFF | DEVDALCPRR | SDRETGASVR | VVNQLLTEMD | GLEARQQVFI |
| 730 | 740 | 750 | 760 | 770 | 780 |
| MAATNRPDII | DPAILRPGRL | DKTLFVGLPP | PADRLAILKT | ITKNGTKPPL | DADVNLEAIA |
| 790 | 800 | 810 | 820 | 830 | 840 |
| GDLRCDCYTG | ADLSALVREA | SICALRQEMA | RQKSGNEKGE | LKVSHKHFEE | AFKKVRSSIS |
| 850 | |||||
| KKDQIMYERL | QESLSR |