Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

Autoinhibited structure

Activated structure

4 structures for O00567

Entry ID Method Resolution Chain Position Source
7MQ8 EM 360 A SA 1-594 PDB
7MQ9 EM 387 A SA 1-594 PDB
7MQA EM 270 A SA 1-594 PDB
AF-O00567-F1 Predicted AlphaFoldDB

497 variants for O00567

Variant ID(s) Position Change Description Diseaes Association Provenance
RCV000626898
rs1360494485
CA408024295
151 S>T Cerebellar ataxia [ClinVar] Yes ClinGen
ClinVar
TOPMed
dbSNP
gnomAD
RCV001331576
rs2086850165
492 Q>R Spinocerebellar ataxia type 36 [ClinVar] Yes ClinVar
dbSNP
TCGA novel 1 M>? Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs1446735906
CA408023097
2 V>G No ClinGen
TOPMed
CA408023095
rs1414345034
2 V>L No ClinGen
TOPMed
gnomAD
rs767668504
CA9734182
6 V>L No ClinGen
ExAC
gnomAD
rs574635880
CA9734184
10 H>Q No ClinGen
1000Genomes
ExAC
gnomAD
CA408023158
rs1235143044
12 V>I No ClinGen
TOPMed
gnomAD
CA9734185
rs780331371
15 A>S No ClinGen
ExAC
gnomAD
rs1489302151
CA408023192
17 L>R No ClinGen
TOPMed
gnomAD
CA408023189
rs1285100548
17 L>V No ClinGen
TOPMed
gnomAD
CA408023194
rs1050934252
18 A>S No ClinGen
TOPMed
gnomAD
COSM1235825
rs1050934252
CA310871134
18 A>T haematopoietic_and_lymphoid_tissue [Cosmic] No ClinGen
cosmic curated
TOPMed
gnomAD
CA408023197
rs1262738915
18 A>V No ClinGen
TOPMed
gnomAD
rs754062261
CA9734186
20 K>E No ClinGen
ExAC
gnomAD
CA310871146
rs754062261
20 K>Q No ClinGen
ExAC
gnomAD
rs1159629500
CA408023217
22 V>M No ClinGen
gnomAD
CA408023225
rs1361966791
23 E>* No ClinGen
gnomAD
CA408023230
rs1417310324
23 E>D No ClinGen
gnomAD
CA9734188
rs779286981
24 E>A No ClinGen
ExAC
gnomAD
CA9734189
rs748611802
24 E>D No ClinGen
ExAC
gnomAD
rs1338150154
CA408023231
24 E>K No ClinGen
TOPMed
rs1321380199
CA408023250
26 S>R No ClinGen
TOPMed
gnomAD
rs1157301414
CA408023254
27 L>R No ClinGen
TOPMed
rs116445545
CA408023253
27 L>V No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA9734191
rs777206998
28 L>P No ClinGen
ExAC
gnomAD
CA9734192
rs777206998
28 L>R No ClinGen
ExAC
gnomAD
rs770415375
CA9734193
30 P>L No ClinGen
ExAC
TOPMed
gnomAD
rs1285327701
CA408023275
31 Q>* No ClinGen
gnomAD
TCGA novel 31 Q>H Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs1399198171
CA408023293
32 V>L No ClinGen
TOPMed
rs1254808713
CA408023302
33 E>G No ClinGen
TOPMed
gnomAD
CA310871624
rs751836247
33 E>K No ClinGen
TOPMed
gnomAD
rs755764596
CA9734233
34 E>D No ClinGen
ExAC
TOPMed
gnomAD
CA408023319
rs563205671
36 V>L No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
CA9734235
rs563205671
36 V>M No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
rs1568540126
CA408023328
37 L>P No ClinGen
Ensembl
CA408023335
rs1360840994
38 N>K No ClinGen
TOPMed
gnomAD
rs1024074874
CA310871662
38 N>S No ClinGen
TOPMed
rs975288920
CA310871665
40 G>V No ClinGen
Ensembl
TCGA novel 42 F>V Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA408023363
rs1443220613
43 H>D No ClinGen
gnomAD
rs1488319448
CA408023366
43 H>R No ClinGen
TOPMed
rs759607127
CA9734239
45 I>M Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ExAC
NCI-TCGA
gnomAD
CA9734238
rs144187608
45 I>V Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ESP
ExAC
NCI-TCGA
TOPMed
gnomAD
rs775667845
CA9734241
50 A>V No ClinGen
ExAC
gnomAD
CA9734242
rs374705763
53 P>S Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ESP
ExAC
NCI-TCGA
TOPMed
gnomAD
rs764481393
CA9734243
55 A>T No ClinGen
ExAC
gnomAD
CA9734244
rs556261152
58 Q>P No ClinGen
ExAC
TOPMed
gnomAD
CA9734246
rs767917526
60 A>G No ClinGen
ExAC
gnomAD
rs767917526
CA9734247
60 A>V No ClinGen
ExAC
gnomAD
CA408023484
rs1568540192
62 E>G No ClinGen
Ensembl
rs745885546
CA9734249
62 E>Q No ClinGen
ExAC
gnomAD
rs530528052
CA310871815
65 N>S No ClinGen
1000Genomes
TOPMed
gnomAD
rs754696610
CA9734251
67 V>L No ClinGen
ExAC
TOPMed
gnomAD
rs754696610
CA408023515
67 V>M No ClinGen
ExAC
TOPMed
gnomAD
rs747898509
CA9734253
68 S>C No ClinGen
ExAC
gnomAD
CA408023524
rs747898509
68 S>F No ClinGen
ExAC
gnomAD
rs1432082453
CA408023522
68 S>P No ClinGen
TOPMed
TCGA novel 68 S>Y Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA408023525
rs1175242270
69 E>K No ClinGen
gnomAD
CA408023647
rs774797749
71 V>F No ClinGen
ExAC
TOPMed
gnomAD
rs774797749
CA9734333
71 V>I No ClinGen
ExAC
TOPMed
gnomAD
rs762509581
CA9734334
72 V>F No ClinGen
ExAC
gnomAD
rs1438931525
CA408023670
73 H>R No ClinGen
TOPMed
CA408023683
rs1235400983
74 E>G No ClinGen
gnomAD
CA310872844
rs914525963
75 D>A No ClinGen
TOPMed
rs539930863
CA310872853
77 R>C No ClinGen
1000Genomes
TOPMed
gnomAD
COSM1641309
rs181807228
COSM1641310
CA9734335
77 R>H stomach [Cosmic] No ClinGen
cosmic curated
1000Genomes
ExAC
TOPMed
gnomAD
rs1233678225
CA408023759
78 L>P No ClinGen
gnomAD
CA9734336
rs772471382
79 L>F No ClinGen
ExAC
gnomAD
rs1356160848
CA408023804
82 T>S No ClinGen
gnomAD
rs761498010
CA9734337
85 P>L No ClinGen
ExAC
gnomAD
CA408023845
rs1465969670
86 S>F No ClinGen
TOPMed
CA408023851
rs1201734807
87 K>R No ClinGen
gnomAD
TCGA novel 88 K>N Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA9734339
rs750240595
89 K>N No ClinGen
ExAC
TOPMed
gnomAD
CA408023880
rs1600156646
89 K>R No ClinGen
Ensembl
TCGA novel 90 K>missing Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs369349153
CA310872877
91 V>A No ClinGen
ESP
TOPMed
gnomAD
CA9734340
rs573280720
91 V>I No ClinGen
1000Genomes
ExAC
gnomAD
CA9734341
rs766330217
92 L>I Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ExAC
NCI-TCGA
gnomAD
rs1246914952
CA408023907
92 L>P No ClinGen
TOPMed
CA408023917
rs1600156665
93 L>F No ClinGen
Ensembl
CA9734342
rs544204994
95 V>A No ClinGen
1000Genomes
ExAC
gnomAD
rs148680348
CA9734343
98 P>S No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs142063161
CA9734344
99 K>N No ClinGen
ESP
ExAC
TOPMed
CA408023958
rs1391268440
100 I>F No ClinGen
gnomAD
rs1195224303
CA408023962
100 I>M No ClinGen
TOPMed
gnomAD
CA408023957
rs1391268440
100 I>V No ClinGen
gnomAD
rs937402982
CA310872895
101 G>A No ClinGen
Ensembl
CA408023975
rs781343694
103 A>S No ClinGen
ExAC
TOPMed
gnomAD
COSM178396
COSM1651344
rs781343694
CA9734347
103 A>T Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
ExAC
NCI-TCGA
TOPMed
gnomAD
rs770112677
CA9734349
108 L>I No ClinGen
ExAC
gnomAD
rs1379183632
CA408024026
110 Y>C No ClinGen
gnomAD
CA9734351
rs749831715
111 N>S No ClinGen
ExAC
TOPMed
gnomAD
CA9734352
rs749831715
111 N>T No ClinGen
ExAC
TOPMed
gnomAD
rs1379149956
CA408024040
112 C>S No ClinGen
TOPMed
rs1332100065
CA408024050
113 Q>H No ClinGen
TOPMed
rs1177465865
CA408024048
113 Q>R No ClinGen
gnomAD
CA408024053
rs1011151170
114 T>A No ClinGen
TOPMed
CA310872934
rs1011151170
114 T>P No ClinGen
TOPMed
CA408024052
COSM352091
rs1011151170
114 T>S lung [Cosmic] No ClinGen
cosmic curated
TOPMed
rs889793082
CA310872955
116 G>R No ClinGen
TOPMed
CA408024072
rs147920994
117 V>A No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
rs147920994
CA9734355
117 V>G No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
CA310872957
rs11553609
119 A>T No ClinGen
Ensembl
RCV000117826
rs2273137
VAR_028793
CA154136
121 I>V No ClinGen
ClinVar
UniProt
1000Genomes
ESP
ExAC
TOPMed
dbSNP
gnomAD
CA408024125
rs1354984320
124 G>E No ClinGen
gnomAD
CA408024136
rs1219647407
COSM1025423
126 R>C Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
NCI-TCGA
gnomAD
CA408024139
rs1280435680
126 R>L No ClinGen
gnomAD
CA9734388
rs553986330
127 L>M No ClinGen
1000Genomes
ExAC
gnomAD
rs1256126208
CA408024146
128 H>Y No ClinGen
gnomAD
TCGA novel 129 F>V Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs1208369890
CA408024172
131 N>S No ClinGen
TOPMed
gnomAD
CA9734391
rs746633097
134 K>N No ClinGen
ExAC
TOPMed
gnomAD
rs1479619853
CA408024194
135 G>S No ClinGen
TOPMed
gnomAD
rs147587802
CA9734395
138 D>G No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs11553608
CA408024211
138 D>H No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs11553608
CA9734394
138 D>N No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA9734398
rs150444414
141 A>T No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA408024260
rs1600157107
145 Q>H No ClinGen
Ensembl
rs1485002736
CA408024286
150 H>Y No ClinGen
TOPMed
CA9734399
rs773191784
151 S>G No ClinGen
ExAC
gnomAD
CA408024315
COSM1025424
rs1360289991
154 R>C endometrium [Cosmic] No ClinGen
cosmic curated
TOPMed
gnomAD
rs760898318
CA9734400
154 R>H No ClinGen
ExAC
gnomAD
rs1568541428
CA408024328
156 K>R No ClinGen
Ensembl
TCGA novel 157 V>I Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
COSM1025425
rs759864950
CA9734403
163 R>Q Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
ExAC
NCI-TCGA
gnomAD
rs1278935925
CA408024398
166 N>S No ClinGen
gnomAD
rs753154885
CA9734405
167 M>R No ClinGen
ExAC
gnomAD
rs753154885
CA408024406
167 M>T No ClinGen
ExAC
gnomAD
CA408024403
rs1600157181
167 M>V No ClinGen
Ensembl
rs777270128
CA9734407
171 S>F No ClinGen
ExAC
TOPMed
gnomAD
rs1191484531
CA408024438
172 I>V No ClinGen
gnomAD
CA408024469
rs200027409
176 D>E No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
CA408024465
rs1452445214
176 D>Y No ClinGen
gnomAD
CA408024471
rs1394527728
177 Q>E No ClinGen
TOPMed
gnomAD
CA408024514
rs1161539160
182 I>M No ClinGen
TOPMed
gnomAD
CA310873343
rs1006362841
184 T>I No ClinGen
gnomAD
CA9734411
COSM1025426
rs528788204
185 F>L endometrium [Cosmic] No ClinGen
cosmic curated
ExAC
TOPMed
gnomAD
CA408024536
rs1294429709
186 S>P No ClinGen
gnomAD
rs769686856
CA9734412
187 M>V No ClinGen
ExAC
TOPMed
gnomAD
rs780014888
CA9734413
188 R>C Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ExAC
NCI-TCGA
TOPMed
gnomAD
rs371285710
CA9734414
COSM1533132
188 R>H lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] No ClinGen
cosmic curated
ESP
ExAC
NCI-TCGA
TOPMed
gnomAD
TCGA novel 189 V>A Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs768477850
CA9734415
189 V>I No ClinGen
ExAC
gnomAD
CA9734491
rs770310855
191 E>K No ClinGen
ExAC
gnomAD
CA408024953
rs1279392910
194 G>E No ClinGen
gnomAD
CA9734492
rs776210317
194 G>R No ClinGen
ExAC
TOPMed
gnomAD
CA408024960
rs1254997852
195 Y>H No ClinGen
TOPMed
rs759054429
CA9734493
198 P>L No ClinGen
ExAC
gnomAD
rs1185988515
CA408025031
201 V>E No ClinGen
gnomAD
rs571542247
CA9734496
201 V>M No ClinGen
1000Genomes
ExAC
gnomAD
rs779346591
CA9734498
202 K>N No ClinGen
ExAC
gnomAD
rs751447208
CA9734499
203 I>M No ClinGen
ExAC
TOPMed
gnomAD
rs1435768250
CA408025055
203 I>S No ClinGen
gnomAD
CA310873846
rs552074786
203 I>V No ClinGen
Ensembl
rs145006178
CA9734500
205 N>D No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA9734501
rs138832466
205 N>S No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA408025099
rs1333091442
207 N>S No ClinGen
TOPMed
CA408025103
rs1417110136
208 A>T No ClinGen
gnomAD
rs742843
CA9734503
209 T>I No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
rs1398702605
CA408025128
210 Y>C No ClinGen
gnomAD
rs141936163
CA9734505
212 R>C No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA9734506
rs145743946
COSM213334
212 R>H breast [Cosmic] No ClinGen
cosmic curated
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA408025159
rs1388528730
213 L>F No ClinGen
TOPMed
CA9734507
rs778316830
213 L>P No ClinGen
ExAC
gnomAD
rs1291773137
CA408025180
215 Q>R No ClinGen
TOPMed
gnomAD
rs747454852
CA9734508
216 F>I No ClinGen
ExAC
gnomAD
CA9734509
rs771484700
218 G>R No ClinGen
ExAC
gnomAD
rs1415457938
CA408025229
219 N>K No ClinGen
TOPMed
rs777062553
CA9734510
220 R>* No ClinGen
ExAC
gnomAD
rs759082490
CA9734511
220 R>Q No ClinGen
ExAC
TOPMed
gnomAD
CA9734514
rs762613579
222 E>G No ClinGen
ExAC
gnomAD
TCGA novel 222 E>K Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs1478137039
CA408025282
224 N>K No ClinGen
TOPMed
gnomAD
CA408025278
rs1256506667
224 N>S No ClinGen
gnomAD
TCGA novel
rs763834414
CA9734515
225 E>D Variant assessed as Somatic; impact. [NCI-TCGA] No ClinGen
ExAC
TOPMed
gnomAD
NCI-TCGA
rs751357087
CA9734516
226 D>E No ClinGen
ExAC
CA408025298
rs1568541845
226 D>H No ClinGen
Ensembl
CA9734517
rs761595082
227 K>E No ClinGen
ExAC
TOPMed
gnomAD
CA9734518
rs767472861
227 K>M No ClinGen
ExAC
gnomAD
CA9734521
rs755067738
230 K>E No ClinGen
ExAC
TOPMed
rs1376321452
CA408025363
233 E>G No ClinGen
gnomAD
rs1316855378
CA408025376
235 T>I No ClinGen
TOPMed
gnomAD
rs1227660203
CA408025386
236 M>I No ClinGen
gnomAD
CA9734522
rs148111239
236 M>T No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs1275628775
CA408025380
236 M>V No ClinGen
TOPMed
CA9734523
rs752930409
240 K>N No ClinGen
ExAC
gnomAD
rs1280369914
CA408025441
245 L>M No ClinGen
gnomAD
CA9734526
rs747389416
249 R>Q No ClinGen
ExAC
TOPMed
gnomAD
TCGA novel 249 R>W Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA9734527
rs757630069
252 M>V No ClinGen
ExAC
gnomAD
rs758609993
CA9734541
254 M>L No ClinGen
ExAC
TOPMed
gnomAD
rs758609993
CA408025509
254 M>V No ClinGen
ExAC
TOPMed
gnomAD
rs764409493
CA9734542
255 D>G No ClinGen
ExAC
TOPMed
gnomAD
CA408025528
rs1232106685
256 I>M No ClinGen
TOPMed
CA9734544
rs139640605
256 I>V No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs1214113074
CA408025529
257 S>P No ClinGen
gnomAD
CA310874053
rs924687663
258 A>T No ClinGen
TOPMed
CA310874056
rs201657011
258 A>V No ClinGen
Ensembl
CA408025544
rs1455743361
259 I>S No ClinGen
gnomAD
rs1168137565
CA408025540
259 I>V No ClinGen
TOPMed
gnomAD
CA408025550
rs1192051996
260 D>G No ClinGen
gnomAD
rs769516393
CA310874078
261 L>F No ClinGen
Ensembl
rs746346520
CA9734547
262 I>L No ClinGen
ExAC
gnomAD
rs147425088
CA310874097
264 I>M No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA408025575
rs1442695433
264 I>V No ClinGen
TOPMed
CA408025580
rs1343970218
265 E>K Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
NCI-TCGA
gnomAD
CA310874098
rs779718621
267 F>C No ClinGen
Ensembl
TCGA novel 267 F>L Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs1436270099
CA408025610
269 S>G No ClinGen
TOPMed
CA9734549
rs779478293
270 R>C No ClinGen
ExAC
TOPMed
gnomAD
CA9734550
rs748779510
270 R>H No ClinGen
ExAC
TOPMed
gnomAD
rs201961803
CA310874119
271 V>M No ClinGen
1000Genomes
CA408025637
rs1438237825
273 S>C No ClinGen
TOPMed
gnomAD
rs1327249671
CA408025649
275 S>C No ClinGen
Ensembl
rs1327249671
CA408025650
275 S>F No ClinGen
Ensembl
CA408025662
rs1600158274
277 Y>S No ClinGen
Ensembl
rs773959398
CA9734552
278 R>C No ClinGen
ExAC
TOPMed
gnomAD
rs747781902
CA9734553
278 R>H Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ExAC
NCI-TCGA
TOPMed
gnomAD
TCGA novel 281 L>Q Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs772891600
CA9734556
283 T>I No ClinGen
ExAC
TOPMed
gnomAD
rs774199487
CA9734557
284 Y>* No ClinGen
ExAC
gnomAD
COSM1259302
rs149229790
CA9734560
286 R>C oesophagus [Cosmic] No ClinGen
cosmic curated
1000Genomes
ESP
ExAC
TOPMed
gnomAD
rs371181487
CA9734561
286 R>H No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA9734562
rs764319713
288 K>R No ClinGen
ExAC
rs1179039119
CA408025741
289 M>I No ClinGen
gnomAD
rs751754683
CA408025747
290 S>I No ClinGen
ExAC
gnomAD
rs751754683
CA9734563
290 S>T No ClinGen
ExAC
gnomAD
CA310874176
rs747347004
293 A>V No ClinGen
Ensembl
rs375245592
CA9734564
296 L>Q No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA408025785
rs1166357559
296 L>V No ClinGen
TOPMed
gnomAD
CA310874177
rs748819142
300 I>T No ClinGen
TOPMed
gnomAD
TCGA novel 301 G>E Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA408025821
rs1354768512
302 E>G No ClinGen
gnomAD
CA9734567
rs756525659
303 A>V Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ExAC
NCI-TCGA
gnomAD
rs760993232
CA9734588
307 R>H No ClinGen
ExAC
TOPMed
gnomAD
CA9734589
rs766775174
308 L>I No ClinGen
ExAC
gnomAD
rs754306599
CA9734590
309 I>V No ClinGen
ExAC
TOPMed
gnomAD
CA9734592
rs370765506
310 A>T Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ESP
ExAC
NCI-TCGA
TOPMed
gnomAD
CA408026568
rs1346709204
312 A>G No ClinGen
gnomAD
CA408026587
rs1428414519
314 S>G No ClinGen
TOPMed
gnomAD
rs752139700
CA9734593
316 T>I No ClinGen
ExAC
gnomAD
TCGA novel 317 N>T Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs1600158730
CA408026635
317 N>T No ClinGen
Ensembl
rs777260707
CA9734595
318 L>V No ClinGen
ExAC
gnomAD
TCGA novel 319 A>V Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA9734597
rs770802582
321 Y>H No ClinGen
ExAC
gnomAD
TCGA novel 323 A>V Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs745731864
CA408026745
326 V>L No ClinGen
ExAC
TOPMed
gnomAD
rs745731864
CA9734599
326 V>M No ClinGen
ExAC
TOPMed
gnomAD
rs769704003
CA310876488
328 I>V No ClinGen
Ensembl
rs1339635348
CA408026800
331 A>T No ClinGen
TOPMed
rs1568542265
CA408026830
333 K>E No ClinGen
Ensembl
CA408026845
rs1195172193
334 A>T No ClinGen
gnomAD
CA9734602
rs761791175
336 F>L No ClinGen
ExAC
gnomAD
rs1455980697
CA408026947
338 A>S No ClinGen
TOPMed
rs752680578
CA9734666
341 T>I No ClinGen
ExAC
gnomAD
rs757279494
CA9734667
344 N>D No ClinGen
ExAC
gnomAD
rs781282696
CA9734668
345 T>I No ClinGen
ExAC
gnomAD
CA9734669
rs200676732
348 Y>H No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
CA408027096
rs1454572364
350 L>F No ClinGen
gnomAD
TCGA novel 351 I>L Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs1386979256
CA408027105
351 I>V No ClinGen
gnomAD
CA408027127
rs1196640718
352 F>L No ClinGen
TOPMed
CA408027136
rs1600159399
353 H>P No ClinGen
Ensembl
CA408027156
rs1600159402
355 T>P No ClinGen
Ensembl
CA9734672
rs769183179
357 I>T No ClinGen
ExAC
gnomAD
CA408027209
rs1240078373
359 R>* No ClinGen
gnomAD
rs774972076
CA9734673
359 R>Q Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ExAC
NCI-TCGA
TOPMed
gnomAD
CA9734674
rs762429294
361 A>V No ClinGen
ExAC
gnomAD
rs1236510542
CA408027237
362 A>T No ClinGen
TOPMed
rs771665237
CA9734675
363 K>E No ClinGen
ExAC
gnomAD
CA9734676
rs142933900
363 K>R No ClinGen
ESP
ExAC
gnomAD
rs1241171818
CA408027268
364 N>S No ClinGen
gnomAD
rs372119483
CA9734677
366 G>V No ClinGen
ESP
ExAC
gnomAD
rs751908488
CA310876879
367 R>C No ClinGen
gnomAD
CA9734680
rs759304704
368 I>V No ClinGen
ExAC
gnomAD
CA408027340
rs1489473491
370 R>Q No ClinGen
gnomAD
CA634327846
rs1568542698
371 Y>* No ClinGen
Ensembl
rs765039673
CA9734681
371 Y>H No ClinGen
ExAC
CA408027389
rs1420189781
377 S>N No ClinGen
TOPMed
gnomAD
rs1162059582
CA408027392
377 S>R No ClinGen
gnomAD
rs1420189781
CA408027391
377 S>T No ClinGen
TOPMed
gnomAD
rs368994152
CA310876890
379 A>T No ClinGen
ESP
CA408027413
rs1410174208
381 R>* Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
NCI-TCGA
TOPMed
gnomAD
CA9734683
rs758338406
381 R>L No ClinGen
ExAC
TOPMed
gnomAD
CA408027414
rs758338406
381 R>Q No ClinGen
ExAC
TOPMed
gnomAD
rs1430075807
CA408027418
382 I>V No ClinGen
TOPMed
CA408027423
COSM1025428
rs1396236537
383 D>N Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
NCI-TCGA
gnomAD
CA9734685
rs750501226
385 F>V No ClinGen
ExAC
TOPMed
gnomAD
CA9734686
rs756214547
386 S>F No ClinGen
ExAC
gnomAD
CA408027486
rs1244539943
390 T>K No ClinGen
gnomAD
CA408027488
rs1244539943
390 T>M Variant assessed as Somatic; impact. [NCI-TCGA] No ClinGen
NCI-TCGA
gnomAD
rs904596992
CA310877099
391 S>C No ClinGen
TOPMed
rs771888944
CA9734748
394 G>R No ClinGen
ExAC
TOPMed
gnomAD
CA9734750
rs140557182
395 E>D No ClinGen
ESP
ExAC
CA9734749
rs773324442
395 E>K No ClinGen
ExAC
gnomAD
CA9734751
rs765430916
396 K>N No ClinGen
ExAC
TOPMed
gnomAD
CA9734753
rs752928248
397 L>F No ClinGen
ExAC
gnomAD
rs752928248
CA9734752
397 L>V No ClinGen
ExAC
gnomAD
rs764465169
CA408027535
398 R>L No ClinGen
ExAC
TOPMed
gnomAD
CA9734754
rs764465169
398 R>Q No ClinGen
ExAC
TOPMed
gnomAD
rs956517280
CA310877146
399 E>Q No ClinGen
TOPMed
CA408027555
rs1278288823
401 V>A No ClinGen
Ensembl
CA408027553
rs1237773738
401 V>L No ClinGen
Ensembl
TCGA novel 403 E>* Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
COSM1025430
CA408027574
rs1329470584
404 R>* Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
NCI-TCGA
gnomAD
rs145617434
CA9734755
404 R>Q No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA9734758
rs781639146
405 L>V No ClinGen
ExAC
gnomAD
CA9734760
rs541120301
408 Y>C No ClinGen
1000Genomes
ExAC
gnomAD
rs1019548699
CA310877160
409 E>A No ClinGen
TOPMed
CA408027611
rs1211324182
410 T>A No ClinGen
TOPMed
gnomAD
rs1450573941
CA408027637
414 P>A No ClinGen
gnomAD
rs138219120
CA9734763
415 R>Q Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ESP
ExAC
NCI-TCGA
TOPMed
gnomAD
CA408027652
rs1367398253
416 K>N No ClinGen
TOPMed
TCGA novel 417 N>I Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
TCGA novel 417 N>S Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA9734765
rs747866124
421 M>T No ClinGen
ExAC
gnomAD
rs1418380912
CA408027703
423 E>D No ClinGen
TOPMed
gnomAD
CA9734766
rs771952945
COSM3963428
425 M>V lung [Cosmic] No ClinGen
cosmic curated
ExAC
TOPMed
gnomAD
TCGA novel 427 Q>R Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs1357546375
CA408027749
428 A>G No ClinGen
TOPMed
rs1250152800
CA408027762
430 E>A No ClinGen
gnomAD
rs1463548760
CA408027766
430 E>D No ClinGen
gnomAD
TCGA novel
CA408027759
rs1600160939
430 E>K Variant assessed as Somatic; impact. [NCI-TCGA] No ClinGen
NCI-TCGA
Ensembl
CA9734799
rs766864927
431 A>E No ClinGen
ExAC
gnomAD
rs1186000331
CA408027769
431 A>S No ClinGen
gnomAD
CA9734800
rs766864927
431 A>V Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ExAC
NCI-TCGA
gnomAD
rs149581558
CA9734802
432 A>T No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
rs752225562
CA9734803
432 A>V No ClinGen
ExAC
TOPMed
gnomAD
rs1301064125
CA408027775
433 A>T No ClinGen
TOPMed
rs1458717968
CA408027783
434 E>A No ClinGen
TOPMed
rs371932118
CA9734805
434 E>D No ClinGen
ESP
ExAC
gnomAD
CA9734804
rs758140839
434 E>K No ClinGen
ExAC
gnomAD
CA9734806
rs746799798
437 R>G No ClinGen
ExAC
TOPMed
gnomAD
rs757161402
CA9734807
437 R>K No ClinGen
ExAC
gnomAD
rs1158124779
CA408027812
438 K>T No ClinGen
TOPMed
CA408027826
rs1293587070
440 E>K No ClinGen
TOPMed
gnomAD
TCGA novel 442 Q>* Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA408027882
rs1600161032
444 K>E No ClinGen
Ensembl
CA9734810
rs745837701
444 K>T No ClinGen
ExAC
gnomAD
CA310877369
rs922862787
446 R>C Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
NCI-TCGA
TOPMed
gnomAD
COSM175875
rs143140440
CA9734811
446 R>H Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
ESP
ExAC
NCI-TCGA
TOPMed
gnomAD
rs1266080816
CA408027939
448 K>N No ClinGen
TOPMed
gnomAD
CA310877386
rs753617790
449 K>* No ClinGen
Ensembl
CA310877383
rs753617790
449 K>E No ClinGen
Ensembl
rs577447466
CA310877390
449 K>R No ClinGen
Ensembl
rs1489525851
CA408027973
451 K>N Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
NCI-TCGA
gnomAD
CA408027994
rs368797562
453 R>L No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs368797562
CA9734815
453 R>Q Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ESP
ExAC
NCI-TCGA
TOPMed
gnomAD
CA9734814
rs183494902
453 R>W No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA9734817
rs766790476
454 L>M No ClinGen
ExAC
gnomAD
CA9734818
rs776964549
454 L>P No ClinGen
ExAC
TOPMed
gnomAD
rs1418128757
CA408028002
455 A>P No ClinGen
gnomAD
CA9734819
rs148253797
RCV000416134
455 A>V No ClinGen
ClinVar
ESP
ExAC
TOPMed
dbSNP
gnomAD
rs764594542
CA9734820
456 A>P No ClinGen
ExAC
TOPMed
gnomAD
CA9734821
rs74685243
456 A>V No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA9734824
rs763810400
458 A>G No ClinGen
ExAC
TOPMed
gnomAD
COSM1410901
rs763810400
CA9734823
458 A>V Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
ExAC
NCI-TCGA
TOPMed
gnomAD
CA408028039
rs1319654525
459 L>F No ClinGen
TOPMed
CA9734826
rs374043080
460 A>T Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ESP
ExAC
NCI-TCGA
TOPMed
gnomAD
CA9734827
rs547494052
460 A>V No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
rs756090193
CA9734828
462 S>T No ClinGen
ExAC
gnomAD
CA9734829
rs779913584
464 N>D No ClinGen
ExAC
gnomAD
CA310877440
rs983138366
465 S>G No ClinGen
TOPMed
rs1207976813
CA408028099
465 S>T No ClinGen
gnomAD
rs1480528537
CA408028121
467 S>G No ClinGen
gnomAD
rs772176939
CA9734833
467 S>T No ClinGen
ExAC
gnomAD
rs777924552
CA408028132
468 T>A No ClinGen
ExAC
TOPMed
gnomAD
rs777924552
CA9734834
468 T>P No ClinGen
ExAC
TOPMed
gnomAD
rs747264445
CA9734835
469 P>L No ClinGen
ExAC
gnomAD
CA408028150
rs1290994038
470 E>Q No ClinGen
TOPMed
CA9734836
rs771134860
471 E>D No ClinGen
ExAC
TOPMed
gnomAD
rs1600161256
CA408028164
471 E>G No ClinGen
Ensembl
CA408028172
rs1431520427
472 C>R No ClinGen
gnomAD
CA408028181
rs1354487476
472 C>W No ClinGen
TOPMed
CA9734878
rs541896402
COSM1410904
CA9734879
475 M>I Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
1000Genomes
ExAC
TOPMed
gnomAD
NCI-TCGA
CA154132
rs6753
RCV000117824
VAR_028794
475 M>T No ClinGen
ClinVar
UniProt
1000Genomes
ESP
ExAC
TOPMed
dbSNP
gnomAD
CA310877978
rs927145273
476 S>N No ClinGen
TOPMed
gnomAD
CA408029423
rs927145273
476 S>T No ClinGen
TOPMed
gnomAD
rs1230598973
CA408029436
477 E>A No ClinGen
TOPMed
rs1031997604
CA310877989
479 P>L No ClinGen
TOPMed
CA408029468
rs1031997604
479 P>R No ClinGen
TOPMed
rs1224919828
CA408029480
480 K>N No ClinGen
TOPMed
rs1278613914
CA408029495
481 K>N Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
NCI-TCGA
gnomAD
TCGA novel 483 K>R Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs754160900 484 K>missing Variant assessed as Somatic; 4.72e-05 impact. [NCI-TCGA] No NCI-TCGA
CA408029546
rs1356366676
485 Q>E No ClinGen
gnomAD
CA9734881
rs769269083
486 K>N No ClinGen
ExAC
rs775063907
CA9734882
487 P>A No ClinGen
ExAC
TOPMed
rs775063907
CA408029568
487 P>S No ClinGen
ExAC
TOPMed
rs1363246992
CA408029589
490 V>F No ClinGen
TOPMed
CA408029603
rs1229540306
491 P>H No ClinGen
gnomAD
rs747662989
CA9734883
493 E>V No ClinGen
ExAC
gnomAD
CA9734885
rs772870277
496 M>I No ClinGen
ExAC
gnomAD
TCGA novel 496 M>L Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs1430956798
CA408029668
496 M>T No ClinGen
TOPMed
rs965550603
CA310878024
497 E>K No ClinGen
TOPMed
CA9734888
rs766107367
499 P>A No ClinGen
ExAC
TOPMed
gnomAD
rs1179854817
CA408029709
499 P>Q No ClinGen
gnomAD
rs766107367
CA9734887
499 P>S No ClinGen
ExAC
TOPMed
gnomAD
CA408029715
rs1363448864
500 S>T No ClinGen
gnomAD
CA9734889
rs759394489
501 I>F No ClinGen
ExAC
gnomAD
CA9734891
rs765131702
501 I>M No ClinGen
ExAC
TOPMed
gnomAD
TCGA novel 503 F>P Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs757313376
CA9734892
503 F>S No ClinGen
ExAC
gnomAD
TCGA novel 504 S>C Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA9734894
rs200939502
504 S>T No ClinGen
ExAC
gnomAD
rs756300272
CA9734895
505 K>E No ClinGen
ExAC
gnomAD
rs780477588
CA9734897
508 K>E No ClinGen
ExAC
gnomAD
rs1555780360
CA9734898
508 K>T No ClinGen
Ensembl
CA310878056
rs891704796
509 K>N No ClinGen
TOPMed
gnomAD
CA9734901
rs755433410
510 K>E No ClinGen
ExAC
TOPMed
gnomAD
CA9734902
rs779538270
511 S>F No ClinGen
ExAC
TOPMed
gnomAD
rs779538270
CA310878059
COSM1025432
511 S>Y Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
ExAC
NCI-TCGA
TOPMed
gnomAD
rs192854828
CA9734903
513 S>P No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
rs369383913
CA310878067
516 E>D No ClinGen
ESP
TOPMed
CA9734905
rs771545962
518 M>I No ClinGen
ExAC
gnomAD
rs772613510
CA9734906
519 S>N No ClinGen
ExAC
TOPMed
gnomAD
CA9734908
rs770566259
521 D>H No ClinGen
ExAC
TOPMed
gnomAD
CA9734909
rs770566259
521 D>N No ClinGen
ExAC
TOPMed
gnomAD
rs552059889
CA9734911
525 T>A No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
rs762800565
CA9734913
526 A>T No ClinGen
ExAC
TOPMed
gnomAD
rs767573273
CA9734914
526 A>V No ClinGen
ExAC
gnomAD
rs750451811
CA9734915
527 G>D No ClinGen
ExAC
gnomAD
rs1381327222
CA408030109
529 T>A No ClinGen
TOPMed
gnomAD
CA310878082
rs995618019
529 T>I No ClinGen
TOPMed
gnomAD
CA310878081
rs995618019
529 T>S No ClinGen
TOPMed
gnomAD
rs375247632
CA9734916
530 S>N No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA408030136
rs1324607002
531 I>V No ClinGen
gnomAD
CA310878088
rs766676480
532 P>A No ClinGen
ExAC
TOPMed
gnomAD
CA9734917
rs766676480
532 P>S No ClinGen
ExAC
TOPMed
gnomAD
rs754162757
CA9734918
533 K>E No ClinGen
ExAC
gnomAD
CA9734919
rs755343499
534 R>K No ClinGen
ExAC
CA408030223
rs1346896525
537 S>F No ClinGen
gnomAD
rs1205749231
CA408030232
538 T>I No ClinGen
TOPMed
gnomAD
CA408030245
rs1460874560
539 P>S No ClinGen
gnomAD
rs1189291969
CA408030260
540 K>E No ClinGen
gnomAD
rs779174960
CA9734920
541 E>G No ClinGen
ExAC
TOPMed
gnomAD
CA9734922
rs528365293
542 E>A No ClinGen
1000Genomes
ExAC
gnomAD
rs951691348
CA310878101
542 E>K No ClinGen
TOPMed
gnomAD
rs951691348
CA408030297
542 E>Q No ClinGen
TOPMed
gnomAD
rs1404897869
CA408030324
544 V>L No ClinGen
gnomAD
CA9734924
rs746472210
547 P>R No ClinGen
ExAC
TOPMed
gnomAD
CA408030465
rs1381533271
551 G>A No ClinGen
gnomAD
CA408030508
rs745554497
553 R>K No ClinGen
ExAC
TOPMed
gnomAD
CA310878105
rs758151740
553 R>S No ClinGen
Ensembl
CA9734927
rs745554497
553 R>T No ClinGen
ExAC
TOPMed
gnomAD
CA310878107
rs969408428
554 S>N No ClinGen
TOPMed
gnomAD
CA408030532
rs1351111730
555 G>D No ClinGen
TOPMed
gnomAD
rs1323073446
CA408030542
556 S>F No ClinGen
gnomAD
rs769515043
CA9734928
556 S>T No ClinGen
ExAC
gnomAD
CA408030544
rs1600163258
557 K>Q No ClinGen
Ensembl
CA408030553
rs1456067334
557 K>R No ClinGen
gnomAD
CA9734930
rs775159291
559 K>N No ClinGen
ExAC
TOPMed
gnomAD
rs762859722
CA9734931
560 R>G No ClinGen
ExAC
gnomAD
CA310878148
rs901085164
563 S>F No ClinGen
TOPMed
gnomAD
rs567898547
CA9734934
565 E>A No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
rs567898547
CA408030711
565 E>G No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
rs768469522
CA9734933
565 E>K No ClinGen
ExAC
TOPMed
gnomAD
rs1429091369
CA408030726
566 E>K No ClinGen
gnomAD
CA9734935
rs535603018
567 P>L No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
CA408030759
rs535603018
567 P>Q No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
rs754071190
CA9734937
569 S>G No ClinGen
ExAC
gnomAD
TCGA novel 569 S>I Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA408030794
rs759853283
569 S>N No ClinGen
ExAC
gnomAD
CA9734938
rs759853283
569 S>T No ClinGen
ExAC
gnomAD
rs1403087174
CA408030831
571 G>E No ClinGen
gnomAD
rs6115354
CA9734939
572 P>L No ClinGen
ExAC
rs989954432
CA310878171
573 E>K No ClinGen
Ensembl
rs752320891
CA9734940
575 A>V No ClinGen
ExAC
TOPMed
gnomAD
RCV000117825
CA154134
VAR_014471
rs5856
576 V>A No ClinGen
ClinVar
UniProt
1000Genomes
ESP
ExAC
TOPMed
dbSNP
gnomAD
CA408031008
rs1266174307
577 G>A No ClinGen
TOPMed
gnomAD
CA408031007
rs1266174307
577 G>D No ClinGen
TOPMed
gnomAD
rs1249654090
CA408031020
578 K>E No ClinGen
TOPMed
rs780689291
CA9734944
578 K>N No ClinGen
ExAC
TOPMed
gnomAD
CA9734943
rs756720146
578 K>R No ClinGen
ExAC
TOPMed
rs1268570538
CA408031105
580 S>N No ClinGen
gnomAD
rs745461760
CA9734945
581 S>C No ClinGen
ExAC
TOPMed
gnomAD
CA310878197
rs962321750
581 S>T No ClinGen
TOPMed
CA310878206
rs890822235
582 K>E No ClinGen
Ensembl
rs769313738
CA9734947
582 K>R No ClinGen
ExAC
TOPMed
gnomAD
rs1386608180
CA408031202
583 K>R No ClinGen
gnomAD
rs779821109
CA9734948
584 K>T No ClinGen
ExAC
gnomAD
rs1319943809
CA408031280
586 K>E No ClinGen
gnomAD
rs568498641
CA310878221
587 F>I No ClinGen
Ensembl
COSM723233
rs1568545131
CA408031368
588 H>R lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] No ClinGen
cosmic curated
Ensembl
NCI-TCGA
CA310878226
rs368420807
591 S>P No ClinGen
Ensembl
CA408031462
rs1370877802
592 Q>R No ClinGen
gnomAD
CA9734950
rs151092895
593 E>* No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
CA408031476
rs151092895
593 E>K No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
CA408031495
rs1296305623
594 D>Y No ClinGen
gnomAD
rs1371443851
CA408031526
595 D>E No ClinGen
gnomAD
rs1391091205
CA408031541
595 D>W No ClinGen
gnomAD

1 associated diseases with O00567

[MIM: 614153]: Spinocerebellar ataxia 36 (SCA36)

A form of spinocerebellar ataxia, a clinically and genetically heterogeneous group of cerebellar disorders. Patients show progressive incoordination of gait and often poor coordination of hands, speech and eye movements, due to degeneration of the cerebellum with variable involvement of the brainstem and spinal cord. SCA36 is characterized by complicated clinical features, with ataxia as the first symptom, followed by characteristic late-onset involvement of the motor neuron system. Ataxic symptoms, such as gait and truncal instability, ataxic dysarthria, and uncoordinated limbs, start in late forties to fifties. Characteristically, affected individuals exhibit tongue atrophy with fasciculation. Progression of motor neuron involvement is typically limited to the tongue and main proximal skeletal muscles in both upper and lower extremities. {ECO:0000269|PubMed:21683323}. Note=The disease is caused by variants affecting the gene represented in this entry. Caused by large hexanucleotide CGCCTG repeat expansions within intron 1. These expansions induce RNA foci and sequester the RNA-binding protein SRSF2. In addition, the transcription of MIR1292, a microRNA gene located just 19 bp 3' of the GGCCTG repeat, is significantly decreased.

Without disease ID
  • A form of spinocerebellar ataxia, a clinically and genetically heterogeneous group of cerebellar disorders. Patients show progressive incoordination of gait and often poor coordination of hands, speech and eye movements, due to degeneration of the cerebellum with variable involvement of the brainstem and spinal cord. SCA36 is characterized by complicated clinical features, with ataxia as the first symptom, followed by characteristic late-onset involvement of the motor neuron system. Ataxic symptoms, such as gait and truncal instability, ataxic dysarthria, and uncoordinated limbs, start in late forties to fifties. Characteristically, affected individuals exhibit tongue atrophy with fasciculation. Progression of motor neuron involvement is typically limited to the tongue and main proximal skeletal muscles in both upper and lower extremities. {ECO:0000269|PubMed:21683323}. Note=The disease is caused by variants affecting the gene represented in this entry. Caused by large hexanucleotide CGCCTG repeat expansions within intron 1. These expansions induce RNA foci and sequester the RNA-binding protein SRSF2. In addition, the transcription of MIR1292, a microRNA gene located just 19 bp 3' of the GGCCTG repeat, is significantly decreased.

3 regional properties for O00567

Type Name Position InterPro Accession
domain Nop domain 174 - 410 IPR002687
domain Nucleolar protein 58/56, N-terminal 5 - 70 IPR012974
domain NOSIC 167 - 219 IPR012976

Functions

Description
EC Number
Subcellular Localization
  • Nucleus, nucleolus
  • Cytoplasm
  • Nucleus, nucleoplasm
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

9 GO annotations of cellular component

Name Definition
box C/D RNP complex A ribonucleoprotein complex containing a box C/D type RNA that can carry out ribose-2'-O-methylation of target RNAs. Box C/D type RNAs are widespread in eukaryotes and in Archaea, suggesting that an RNA-based guide mechanism for directing specific RNA 2'-O-ribose methylations was present in the common ancestor of Archaea and Eukarya.
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
fibrillar center A structure found most metazoan nucleoli, but not usually found in lower eukaryotes; surrounded by the dense fibrillar component; the zone of transcription from multiple copies of the pre-rRNA genes is in the border region between these two structures.
membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
nucleolus A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
nucleoplasm That part of the nuclear content other than the chromosomes or the nucleolus.
pre-snoRNP complex A ribonucleoprotein complex that contains a precursor small nucleolar RNA (pre-snoRNA) and associated proteins, and forms during small nucleolar ribonucleoprotein complex (snoRNP) assembly. Pre-snoRNP complexes may contain proteins not found in the corresponding mature snoRNP complexes.
small-subunit processome A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins.
sno(s)RNA-containing ribonucleoprotein complex A ribonucleoprotein complex that contains an RNA molecule of the snoRNA family and associated proteins. Many are involved in a step of processing of rRNA molecules: cleavage, 2'-O-methylation, or pseudouridylation, but other RNA types can be targets as well. The majority fall into one of two classes, box C/D type or box H/ACA type, which are conserved across eukaryotes and archaea. Other members include the telomerase RNA and the ribonuclease MRP RNA.

4 GO annotations of molecular function

Name Definition
cadherin binding Binding to cadherin, a type I membrane protein involved in cell adhesion.
histone methyltransferase binding Binding to a histone methyltransferase enzyme.
RNA binding Binding to an RNA molecule or a portion thereof.
snoRNA binding Binding to a small nucleolar RNA.

1 GO annotations of biological process

Name Definition
rRNA processing Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.

3 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
Q12460 NOP56 Nucleolar protein 56 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) PR
Q9Y2X3 NOP58 Nucleolar protein 58 Homo sapiens (Human) PR
Q9D6Z1 Nop56 Nucleolar protein 56 Mus musculus (Mouse) PR
10 20 30 40 50 60
MVLLHVLFEH AVGYALLALK EVEEISLLQP QVEESVLNLG KFHSIVRLVA FCPFASSQVA
70 80 90 100 110 120
LENANAVSEG VVHEDLRLLL ETHLPSKKKK VLLGVGDPKI GAAIQEELGY NCQTGGVIAE
130 140 150 160 170 180
ILRGVRLHFH NLVKGLTDLS ACKAQLGLGH SYSRAKVKFN VNRVDNMIIQ SISLLDQLDK
190 200 210 220 230 240
DINTFSMRVR EWYGYHFPEL VKIINDNATY CRLAQFIGNR RELNEDKLEK LEELTMDGAK
250 260 270 280 290 300
AKAILDASRS SMGMDISAID LINIESFSSR VVSLSEYRQS LHTYLRSKMS QVAPSLSALI
310 320 330 340 350 360
GEAVGARLIA HAGSLTNLAK YPASTVQILG AEKALFRALK TRGNTPKYGL IFHSTFIGRA
370 380 390 400 410 420
AAKNKGRISR YLANKCSIAS RIDCFSEVPT SVFGEKLREQ VEERLSFYET GEIPRKNLDV
430 440 450 460 470 480
MKEAMVQAEE AAAEITRKLE KQEKKRLKKE KKRLAALALA SSENSSSTPE ECEEMSEKPK
490 500 510 520 530 540
KKKKQKPQEV PQENGMEDPS ISFSKPKKKK SFSKEELMSS DLEETAGSTS IPKRKKSTPK
550 560 570 580 590
EETVNDPEEA GHRSGSKKKR KFSKEEPVSS GPEEAVGKSS SKKKKKFHKA SQED