E7F3X9
Gene name |
ddr1 |
Protein name |
receptor protein-tyrosine kinase |
Names |
|
Species |
Danio rerio (Zebrafish) (Brachydanio rerio) |
KEGG Pathway |
dre:100007346 |
EC number |
|
Protein Class |
|
Descriptions
Autoinhibitory domains (AIDs)
Target domain |
668-966 (Protein kinase domain) |
Relief mechanism |
PTM |
Assay |
|
Accessory elements
No accessory elements
References
- Sammon D et al. (2020) "Two-step release of kinase autoinhibition in discoidin domain receptor 1", Proceedings of the National Academy of Sciences of the United States of America, 117, 22051-22060
- Fu HL et al. (2014) "Glycosylation at Asn211 regulates the activation state of the discoidin domain receptor 1 (DDR1)", The Journal of biological chemistry, 289, 9275-87
Autoinhibited structure
Activated structure
0 structures for E7F3X9
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|
No variants for E7F3X9
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for E7F3X9 | |||||
No associated diseases with E7F3X9
6 regional properties for E7F3X9
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Coagulation factor 5/8 C-terminal domain | 34 - 189 | IPR000421 |
| domain | Protein kinase domain | 668 - 966 | IPR000719 |
| domain | Serine-threonine/tyrosine-protein kinase, catalytic domain | 668 - 966 | IPR001245 |
| conserved_site | Tyrosine-protein kinase, receptor class II, conserved site | 851 - 859 | IPR002011 |
| active_site | Tyrosine-protein kinase, active site | 813 - 825 | IPR008266 |
| domain | Tyrosine-protein kinase, catalytic domain | 668 - 966 | IPR020635 |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| receptor complex | Any protein complex that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| collagen binding | Binding to collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%). |
| protein tyrosine kinase collagen receptor activity | Combining with collagen and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate. |
| transmembrane receptor protein tyrosine kinase activity | Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| positive regulation of kinase activity | Any process that activates or increases the frequency, rate or extent of kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. |
| regulation of response to external stimulus | Any process that modulates the frequency, rate or extent of a response to an external stimulus. |
| transmembrane receptor protein tyrosine kinase signaling pathway | The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell where the receptor possesses tyrosine kinase activity, and ending with the regulation of a downstream cellular process, e.g. transcription. |
25 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q5F3X2 | DDR1 | receptor protein-tyrosine kinase | Gallus gallus (Chicken) | SS |
| Q7YR43 | DDR1 | Epithelial discoidin domain-containing receptor 1 | Pan troglodytes (Chimpanzee) | SS |
| Q16832 | DDR2 | Discoidin domain-containing receptor 2 | Homo sapiens (Human) | SS |
| Q08345 | DDR1 | Epithelial discoidin domain-containing receptor 1 | Homo sapiens (Human) | EV |
| Q62371 | Ddr2 | Discoidin domain-containing receptor 2 | Mus musculus (Mouse) | SS |
| Q03146 | Ddr1 | Epithelial discoidin domain-containing receptor 1 | Mus musculus (Mouse) | SS |
| Q63474 | Ddr1 | Epithelial discoidin domain-containing receptor 1 | Rattus norvegicus (Rat) | SS |
| Q95ZV7 | ddr-2 | Discoidin domain-containing receptor tyrosine kinase B | Caenorhabditis elegans | PR |
| P93050 | BSH | Probable LRR receptor-like serine/threonine-protein kinase RKF3 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8AXB3 | kdrl | Vascular endothelial growth factor receptor kdr-like | Danio rerio (Zebrafish) (Brachydanio rerio) | SS |
| Q5GIT4 | kdr | Vascular endothelial growth factor receptor 2 | Danio rerio (Zebrafish) (Brachydanio rerio) | SS |
| O13146 | epha3 | Ephrin type-A receptor 3 | Danio rerio (Zebrafish) (Brachydanio rerio) | SS |
| O73878 | ephb4b | Ephrin type-B receptor 4b | Danio rerio (Zebrafish) (Brachydanio rerio) | SS |
| F1QVU0 | ltk | Tyrosine-protein kinase receptor | Danio rerio (Zebrafish) (Brachydanio rerio) | SS |
| Q90Z00 | fgfr1a | Fibroblast growth factor receptor 1-A | Danio rerio (Zebrafish) (Brachydanio rerio) | SS |
| Q90413 | fgfr4 | Fibroblast growth factor receptor 4 | Danio rerio (Zebrafish) (Brachydanio rerio) | SS |
| O73791 | tek | Angiopoietin-1 receptor | Danio rerio (Zebrafish) (Brachydanio rerio) | SS |
| Q8JFR5 | kita | Mast/stem cell growth factor receptor kita | Danio rerio (Zebrafish) (Brachydanio rerio) | SS |
| Q9I8N6 | csf1r | Macrophage colony-stimulating factor 1 receptor | Danio rerio (Zebrafish) (Brachydanio rerio) | SS |
| Q9DE49 | pdgfra | Platelet-derived growth factor receptor alpha | Danio rerio (Zebrafish) (Brachydanio rerio) | SS |
| Q5MD89 | flt4 | Vascular endothelial growth factor receptor 3 | Danio rerio (Zebrafish) (Brachydanio rerio) | SS |
| O13147 | ephb3 | Ephrin type-B receptor 3 | Danio rerio (Zebrafish) (Brachydanio rerio) | SS |
| Q9YI66 | tyro3 | Tyrosine-protein kinase receptor TYRO3 | Danio rerio (Zebrafish) (Brachydanio rerio) | PR |
| Q8JG38 | fgfr2 | Fibroblast growth factor receptor 2 | Danio rerio (Zebrafish) (Brachydanio rerio) | SS |
| Q9I8X3 | fgfr3 | Fibroblast growth factor receptor 3 | Danio rerio (Zebrafish) (Brachydanio rerio) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MATQMVSLLP | ALLIVLLASC | TAAQDLDWHF | ETAKCRYALG | MEDGVIPDSD | ITASSAWSDS |
| 70 | 80 | 90 | 100 | 110 | 120 |
| TEAKHGRLSN | GEGDGAWCPA | GPVFPSASEF | LQVDLRKLHF | LSLVGTQGRH | ADGLGREFAR |
| 130 | 140 | 150 | 160 | 170 | 180 |
| SYRLRYSRDG | RHWMTWKDRW | GQEVVSGNEN | TYDIVLKDLG | PPIIARMVRF | YPLADRVMSV |
| 190 | 200 | 210 | 220 | 230 | 240 |
| CLRVELYGCV | WKDGLKAYTA | PLGHVMDLSG | SLVNFNDSVY | DGSKEGGVIF | GGLGQLCDGV |
| 250 | 260 | 270 | 280 | 290 | 300 |
| LGGNDFMESK | ELRVWPGYDY | VGWNRETLGQ | PTVDIEFHFE | KTRIFHTMQV | HSNNRHTQGV |
| 310 | 320 | 330 | 340 | 350 | 360 |
| RVFSEVVCKF | KASLLSPWAE | PELSLQVSDL | HDLSSRTISL | PLGGRPAQIL | RCHFAFADNW |
| 370 | 380 | 390 | 400 | 410 | 420 |
| LLISEISFYS | MPFEDGSVLP | PIPSSSSRPL | NATSYSPITA | NATSSPTNLL | MTNSSLLPSS |
| 430 | 440 | 450 | 460 | 470 | 480 |
| MPTEMSGITL | RVGIPVAKDD | SSHTAILIGC | LVGIILLLLA | VIVVILWRQY | WKKLLGKAQG |
| 490 | 500 | 510 | 520 | 530 | 540 |
| SLSSDELRVH | LSVPSDNVVI | NNTNTHTYSS | RYQRIHTFPD | DRDREGEYQE | PSTVLRPRDQ |
| 550 | 560 | 570 | 580 | 590 | 600 |
| RDSTALLLNN | PAYHLLLSDL | THGPNRLTNC | HSQQEKPLNL | SQACAIDMVD | KGLPIQEGPP |
| 610 | 620 | 630 | 640 | 650 | 660 |
| PYPGAPPPGL | SGAHYGEASG | GGASVPHYAE | ADIISLQGVS | GNNTYAVPAL | SATPTDCPPL |
| 670 | 680 | 690 | 700 | 710 | 720 |
| PELPRERLVF | KEKLGEGQFG | EVHLCEIENP | QDLANLEFPF | NVRKGRPLLV | AVKILRPDAS |
| 730 | 740 | 750 | 760 | 770 | 780 |
| KNARNDFLKE | VKILSRLKDP | NIIRLLGVCV | SSDPLCMVTE | YMESGDLNQY | LSHRVLLDKS |
| 790 | 800 | 810 | 820 | 830 | 840 |
| GPSQNTPTIS | YPALISMASQ | IASGMKFLAS | LNFVHRDLAT | RNCLVGGERG | ESEERGGERH |
| 850 | 860 | 870 | 880 | 890 | 900 |
| IKIADFGMSR | NLYAGDYYRI | QGRAVLPIRW | MAWECILMGK | FTTASDVWAF | GVTLWEMLSV |
| 910 | 920 | 930 | 940 | 950 | 960 |
| CQEQPYSHMT | DEQVIDNAGE | FFRDQGRQVY | LSRPAVCPQG | LYELMLSCWN | RDCKLRPSFA |
| 970 | |||||
| YIHSFLTEDA | MNMV |