B9GAG9
Gene name |
KTI12 |
Protein name |
Protein KTI12 homolog |
Names |
OsKTI12, Protein DEFORMED ROOTS AND LEAVES 1, OsDRL1 |
Species |
Oryza sativa subsp japonica (Rice) |
KEGG Pathway |
osa:9270154 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for B9GAG9
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-B9GAG9-F1 | Predicted | AlphaFoldDB |
No variants for B9GAG9
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for B9GAG9 | |||||
No associated diseases with B9GAG9
No regional properties for B9GAG9
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for B9GAG9 | |||
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| elongator holoenzyme complex | A heterohexameric protein complex composed two discrete heterotrimeric subcomplexes that is involved in modification of wobble nucleosides in tRNA. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| calmodulin binding | Binding to calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states. |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| 5-carbamoylmethyl uridine residue modification | The chemical reactions and pathways involving the addition of a 5-carbamoylmethyl group to a uridine residue in RNA. |
| regulation of transcription by RNA polymerase II | Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II. |
| tRNA modification | The covalent alteration of one or more nucleotides within a tRNA molecule to produce a tRNA molecule with a sequence that differs from that coded genetically. |
| tRNA wobble uridine modification | The process in which a uridine in position 34 of a tRNA is post-transcriptionally modified. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9LMH0 | KTI12 | Protein KTI12 homolog | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MALVVICGQP | CSGKSAAAAC | LAAALCSSTS | DLTVRIIDES | SLHLGRNDSY | KDMVVEKNLR |
| 70 | 80 | 90 | 100 | 110 | 120 |
| GVLRSEVDRS | VSRDSIIVVD | SLNNIKGYRY | ELWCLARASG | IRYCVLFCDT | EVDHCREWNT |
| 130 | 140 | 150 | 160 | 170 | 180 |
| KRQEKGEPTY | DNNIFDDLVS | RFEKPDRRNR | WDSPLFELFP | SRDGVMESSP | VIAEAVSYLT |
| 190 | 200 | 210 | 220 | 230 | 240 |
| KKVDSKTRDV | KVLQPTIATQ | TARTTEANSL | YEMDKATQEV | INAIVEAQSC | GLGLPVNKIS |
| 250 | 260 | 270 | 280 | 290 | 300 |
| LGPDLPTICL | QRSVGLPELR | SLRRTFIKLA | GQYSLSGPPP | PADADSATRM | FVDYLNREIS |
| S |