Q9UKY1
Gene name |
ZHX1 |
Protein name |
Zinc fingers and homeoboxes protein 1 |
Names |
|
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:11244 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
5 structures for Q9UKY1
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 2ECB | NMR | - | A | 565-640 | PDB |
| 2GHF | NMR | - | A | 60-153 | PDB |
| 2LY9 | NMR | - | A | 462-532 | PDB |
| 3NAR | X-ray | 260 A | A/B | 655-731 | PDB |
| AF-Q9UKY1-F1 | Predicted | AlphaFoldDB |
541 variants for Q9UKY1
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| TCGA novel | 1 | M>? | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs777615439 CA4864915 |
5 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed |
| TCGA novel | 5 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4864913 rs752379171 |
8 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1169974550 CA372118814 |
9 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA4864912 rs200532502 |
9 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1241454911 CA372118803 |
10 | P>S | No |
ClinGen gnomAD |
|
|
CA4864911 rs189340272 |
11 | C>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA372118743 rs1444057883 |
12 | M>I | No |
ClinGen gnomAD |
|
|
CA4864910 rs753435018 |
14 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs369954197 CA4864909 |
15 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1563810184 CA372118666 |
16 | S>G | No |
ClinGen Ensembl |
|
|
CA4864907 rs375364159 |
19 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs763387925 CA4864906 |
22 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs763387925 CA4864905 |
22 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs770374909 CA4864903 |
23 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1341575535 CA372118475 |
24 | L>F | No |
ClinGen gnomAD |
|
| TCGA novel | 24 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs937739346 CA184491151 |
25 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs765258778 CA4864901 |
26 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs765258778 CA4864902 |
26 | S>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 27 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4864900 rs770997426 |
31 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs148312837 CA4864899 |
33 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1170030362 CA372118331 |
33 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs777987589 CA4864898 |
34 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4864897 rs772134208 |
36 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs772134208 CA372118292 |
36 | T>R | No |
ClinGen ExAC gnomAD |
|
|
rs1418423541 CA372118283 |
37 | P>R | No |
ClinGen gnomAD |
|
|
rs748002563 CA4864896 |
37 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1456342619 CA372118277 |
38 | V>I | No |
ClinGen TOPMed |
|
|
CA372118262 rs1186996567 |
39 | E>G | No |
ClinGen gnomAD |
|
|
CA4864895 rs778536893 |
41 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1205575188 COSM165724 CA372118229 |
42 | R>T | breast [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs577418662 CA184491130 |
45 | S>G | No |
ClinGen Ensembl |
|
|
CA372118192 rs1437432471 |
45 | S>N | No |
ClinGen gnomAD |
|
|
CA4864894 rs754988142 |
49 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4864893 rs200056989 |
49 | D>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4864892 rs779775993 |
52 | V>F | No |
ClinGen ExAC gnomAD |
|
|
rs755688731 CA4864891 |
53 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA372118028 rs1231856350 |
53 | H>Y | No |
ClinGen gnomAD |
|
|
rs749892729 CA372117979 |
55 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749892729 CA4864890 |
55 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4864888 rs756829553 |
59 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA4864887 rs142179845 |
60 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA372117893 rs1406559572 |
61 | Q>H | No |
ClinGen gnomAD |
|
|
CA4864886 rs765507040 |
63 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4864885 rs760106115 |
63 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4864884 rs777131344 |
66 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA184491041 rs1023818653 |
68 | G>S | No |
ClinGen Ensembl |
|
| TCGA novel | 71 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs200994423 CA184491032 |
73 | K>Q | No |
ClinGen 1000Genomes |
|
|
CA372117679 rs1469840898 |
76 | T>I | No |
ClinGen gnomAD |
|
|
rs372656760 CA4864882 |
76 | T>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4864881 rs773123979 |
78 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs149599471 CA4864880 |
80 | P>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1214946078 CA372117619 |
81 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
rs138403319 CA4864879 |
82 | L>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA184490957 rs748203625 |
84 | M>V | No |
ClinGen TOPMed |
|
|
rs1331796326 CA372117541 |
87 | F>L | No |
ClinGen gnomAD |
|
|
rs1223525481 CA372117531 |
87 | F>L | No |
ClinGen gnomAD |
|
|
CA372117535 rs1308216850 |
87 | F>S | No |
ClinGen gnomAD |
|
|
CA372117491 rs1563810045 |
90 | D>G | No |
ClinGen Ensembl |
|
|
rs533940290 CA4864876 |
90 | D>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs780152230 CA4864875 |
91 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755503928 CA184490927 |
95 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs755503928 CA184490923 |
95 | N>T | No |
ClinGen TOPMed gnomAD |
|
|
rs763739765 CA4864869 |
101 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs754978851 CA184490856 |
103 | V>D | No |
ClinGen Ensembl |
|
| TCGA novel | 104 | C>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4864867 rs376750048 COSM1095742 |
106 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs376750048 CA4864866 |
106 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs761137959 CA4864865 |
108 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs773386697 CA4864864 |
108 | N>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 113 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA372116846 rs1586823608 |
118 | S>C | No |
ClinGen Ensembl |
|
|
rs1215524745 CA372116743 |
124 | Y>C | No |
ClinGen gnomAD |
|
|
CA4864861 rs185407278 |
126 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs145829087 CA4864860 COSM1233470 |
129 | E>D | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs1563809964 CA372116576 |
135 | M>I | No |
ClinGen Ensembl |
|
|
CA4864857 rs769904122 |
135 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA184490781 rs375159712 |
138 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA |
|
rs532503720 CA4864856 |
138 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4864855 rs780822047 |
140 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554635969 CA372116515 |
140 | N>S | No |
ClinGen Ensembl |
|
|
CA372116507 rs1437557345 |
141 | Q>K | No |
ClinGen Ensembl |
|
|
CA372116484 rs1429928152 |
142 | T>I | No |
ClinGen gnomAD |
|
|
CA4864854 rs756726390 |
143 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs370578645 CA4864853 |
145 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1435621529 CA372116386 |
147 | T>I | No |
ClinGen gnomAD |
|
|
rs758009235 CA4864851 |
148 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs777428197 CA4864852 |
148 | I>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 149 | N>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 149 | N>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA372116257 rs1186505066 |
155 | G>V | No |
ClinGen gnomAD |
|
|
CA372116248 rs1485161372 |
156 | S>T | No |
ClinGen gnomAD |
|
|
CA184490715 rs780372539 |
158 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780372539 CA4864849 |
158 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1361075964 CA372116196 |
159 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA184490710 rs866425206 |
162 | N>D | No |
ClinGen Ensembl |
|
|
CA4864848 rs756666974 |
162 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA372116117 rs1231462752 |
165 | Q>E | No |
ClinGen gnomAD |
|
|
CA184490687 rs1050241621 |
169 | T>I | No |
ClinGen gnomAD |
|
|
CA184490664 rs1050241621 |
169 | T>K | No |
ClinGen gnomAD |
|
|
rs1403066120 CA372116046 |
171 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA184490650 rs915046477 |
173 | S>Y | No |
ClinGen Ensembl |
|
|
CA4864846 rs35951597 |
174 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs375935655 CA4864844 |
179 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs764440402 CA4864843 |
187 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA4864841 rs775485491 |
189 | N>Y | No |
ClinGen ExAC gnomAD |
|
|
CA4864839 rs527977408 |
191 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA372115127 rs1409758371 |
193 | N>D | No |
ClinGen TOPMed |
|
|
CA4864838 rs369013427 |
195 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs746535667 CA4864836 |
195 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs369013427 CA4864837 |
195 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA4864834 rs144573933 |
196 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA184490553 rs200158721 |
200 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA4864833 rs747781614 |
201 | N>H | No |
ClinGen ExAC gnomAD |
|
|
CA4864831 rs756439344 |
204 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA4864827 rs201786424 |
206 | V>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs367724677 COSM146122 CA4864828 |
206 | V>I | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs367724677 CA4864829 |
206 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs764258193 CA4864826 |
208 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA184490501 rs936881623 |
211 | E>K | No |
ClinGen TOPMed |
|
|
CA372114154 rs1563809777 |
215 | K>R | No |
ClinGen Ensembl |
|
|
rs375714181 CA4864825 |
216 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1233687467 CA372114139 |
216 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA4864824 rs752973316 |
217 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs759275777 CA4864823 |
218 | R>C | Variant assessed as Somatic; 4.624e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA4864822 rs759275777 |
218 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4864821 rs372444054 |
218 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA372114010 rs1397343995 |
221 | I>T | No |
ClinGen gnomAD |
|
|
rs916809531 CA184490462 |
222 | V>A | No |
ClinGen Ensembl |
|
|
rs1243191200 CA372114000 |
222 | V>I | No |
ClinGen gnomAD |
|
|
CA4864820 rs368819786 |
224 | N>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA372113932 rs760635874 |
226 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4864819 rs760635874 |
226 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA184490413 rs952936160 |
227 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
CA372113915 rs952936160 |
227 | S>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1450420484 CA372113898 |
229 | A>T | No |
ClinGen gnomAD |
|
|
CA372113849 rs1292068773 |
231 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA372113858 rs1410642223 |
231 | E>K | No |
ClinGen TOPMed |
|
|
CA372113805 rs1338986727 |
233 | N>S | No |
ClinGen TOPMed |
|
|
CA372113778 rs1250740291 |
234 | T>I | No |
ClinGen gnomAD |
|
|
CA184490402 rs1026223442 |
236 | T>I | No |
ClinGen Ensembl |
|
|
rs374383567 CA4864818 |
237 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1315398271 CA372113720 |
238 | I>T | No |
ClinGen TOPMed |
|
|
CA372113731 rs1479339658 |
238 | I>V | No |
ClinGen gnomAD |
|
|
rs1274494036 CA372113679 |
241 | R>G | No |
ClinGen gnomAD |
|
|
rs1214319683 CA372113665 |
241 | R>S | No |
ClinGen gnomAD |
|
|
rs771561714 CA4864817 |
243 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA372113618 rs1364231140 |
244 | P>R | No |
ClinGen TOPMed |
|
|
rs1563809690 CA372113602 |
245 | S>N | No |
ClinGen Ensembl |
|
|
CA372113550 rs1233987276 |
247 | A>P | No |
ClinGen gnomAD |
|
|
CA372113532 rs965804264 |
248 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs965804264 CA184490335 |
248 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA4864811 rs150942935 |
249 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs768305461 CA4864812 |
249 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs1392863604 CA372113475 |
251 | V>A | No |
ClinGen gnomAD |
|
|
rs1443716738 CA372113444 |
253 | P>L | No |
ClinGen TOPMed |
|
|
CA4864807 rs778357930 |
255 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1203934017 CA372113420 |
256 | V>F | No |
ClinGen TOPMed |
|
|
CA372113422 rs1203934017 |
256 | V>I | No |
ClinGen TOPMed |
|
|
rs1244072417 CA372113369 |
261 | A>T | No |
ClinGen TOPMed |
|
| TCGA novel | 262 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs17854004 CA184490250 |
263 | V>M | No |
ClinGen Ensembl |
|
|
rs765411034 CA4864804 |
264 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372113276 rs1187191690 |
265 | T>A | No |
ClinGen TOPMed |
|
|
CA372113248 rs1254378942 |
266 | A>D | No |
ClinGen gnomAD |
|
|
CA372113245 COSM378826 rs1254378942 |
266 | A>V | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs755198935 CA4864803 |
268 | S>Y | No |
ClinGen ExAC |
|
|
CA372113199 rs1263663827 |
269 | A>V | No |
ClinGen Ensembl |
|
|
CA4864801 rs753622216 |
270 | Q>* | No |
ClinGen ExAC |
|
|
CA372113166 rs773135160 |
270 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs374360214 CA4864799 |
270 | Q>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs374360214 CA4864800 |
270 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA372113105 rs1271119322 |
273 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA372113100 rs1271119322 |
273 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs767384028 CA4864797 |
275 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA4864796 rs761334367 |
277 | P>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 280 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA372112930 rs1237202784 |
282 | P>S | No |
ClinGen gnomAD |
|
|
CA4864795 rs201841106 |
284 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs748958786 COSM1095739 CA4864794 |
285 | S>N | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs748958786 CA4864793 |
285 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs1471055931 CA372112824 |
287 | P>L | No |
ClinGen TOPMed |
|
|
CA372112832 rs1586823081 |
287 | P>S | No |
ClinGen Ensembl |
|
|
rs776929418 CA4864792 |
288 | T>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs747321018 CA4864790 |
289 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs572569224 CA184490149 |
290 | N>I | No |
ClinGen 1000Genomes gnomAD |
|
|
CA372112777 rs572569224 |
290 | N>S | No |
ClinGen 1000Genomes gnomAD |
|
|
CA372112723 rs1384782114 |
293 | L>S | No |
ClinGen gnomAD |
|
|
CA4864789 rs778449892 |
295 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA4864788 rs758938232 |
296 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1434148274 CA372112590 |
297 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
TCGA novel rs1586823058 CA372112612 |
297 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA Ensembl |
|
rs369629237 CA372112472 |
302 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs369629237 CA4864787 |
302 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA372112420 rs1272529460 |
304 | N>S | No |
ClinGen TOPMed |
|
|
CA4864784 rs755210044 |
309 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA4864783 rs373785363 |
311 | M>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1350367334 CA372112201 |
315 | T>A | No |
ClinGen gnomAD |
|
|
CA372112193 rs1281227537 |
315 | T>I | No |
ClinGen gnomAD |
|
|
CA4864782 rs766441550 |
318 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs541736561 CA4864781 |
319 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1271998785 CA372112077 |
322 | K>R | No |
ClinGen gnomAD |
|
|
rs1326335563 CA372111982 |
327 | Q>E | No |
ClinGen gnomAD |
|
|
rs1264313339 CA372111853 |
335 | Q>* | No |
ClinGen TOPMed |
|
|
rs76772843 CA184490080 |
339 | H>Q | No |
ClinGen Ensembl |
|
|
rs1416936636 CA372111777 |
339 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1375951927 CA372111752 |
340 | G>S | No |
ClinGen TOPMed |
|
|
CA372111600 rs1172450823 |
345 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs761706584 CA4864778 |
346 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs763656006 CA4864776 |
349 | E>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA |
| TCGA novel | 352 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1257952942 CA372111335 |
357 | N>K | No |
ClinGen gnomAD |
|
|
CA4864771 rs747411383 |
357 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA184490035 COSM1095737 rs200967178 |
358 | G>E | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
CA4864770 rs773682397 |
359 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs772759172 CA4864769 |
360 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA184490024 rs148858924 |
362 | T>I | No |
ClinGen ESP TOPMed |
|
|
rs1275264993 CA372111277 |
363 | V>I | No |
ClinGen gnomAD |
|
|
rs748649570 CA4864768 |
366 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA4864767 rs778922946 |
367 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1321557684 CA372111179 |
370 | I>T | No |
ClinGen TOPMed |
|
|
rs1478987378 CA372111149 |
372 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1356576619 CA372111095 |
374 | I>V | No |
ClinGen gnomAD |
|
|
CA4864764 rs780345342 |
376 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1413836574 CA372110989 |
378 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA184490003 rs947723490 |
378 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
rs916234491 CA184490000 |
379 | N>Y | No |
ClinGen Ensembl |
|
|
CA372110835 rs1330348456 |
383 | S>F | No |
ClinGen gnomAD |
|
|
CA4864762 rs750258115 |
384 | I>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 387 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA372110666 rs1191016239 |
393 | Q>P | No |
ClinGen gnomAD |
|
|
rs1191016239 CA372110667 |
393 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA184489944 rs545103974 |
395 | G>D | No |
ClinGen 1000Genomes gnomAD |
|
|
rs114129661 CA372110629 |
395 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4864758 rs114129661 |
395 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA372110563 rs1214386837 |
399 | T>I | No |
ClinGen gnomAD |
|
|
CA184489917 rs767123344 |
401 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs767123344 CA4864755 |
401 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs765024823 CA4864754 |
404 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1272966841 CA372110496 |
404 | T>K | No |
ClinGen gnomAD |
|
|
rs759246041 CA4864753 |
405 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA372110415 rs1251194744 |
407 | L>S | No |
ClinGen TOPMed |
|
|
rs1457250241 CA372110354 |
410 | T>A | No |
ClinGen TOPMed |
|
|
rs774933867 CA4864749 |
411 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA372110318 rs768992606 |
413 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs768992606 CA4864748 |
413 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA372110279 rs1462994997 |
414 | A>V | No |
ClinGen gnomAD |
|
|
CA372110263 rs1563809307 |
415 | L>S | No |
ClinGen Ensembl |
|
|
rs892645215 CA184489835 |
416 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA4864747 rs144435068 |
417 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs746076691 CA4864743 |
420 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA4864744 rs770050796 |
420 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4864742 rs781326525 |
421 | P>S | No |
ClinGen ExAC |
|
|
CA372110131 rs1392722735 |
422 | S>R | No |
ClinGen TOPMed |
|
|
rs751265965 CA4864740 |
424 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA372110091 rs777798392 |
426 | I>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372110087 rs1252850806 |
426 | I>M | No |
ClinGen gnomAD |
|
|
rs777798392 CA4864739 |
426 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758241093 CA4864738 |
430 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA4864737 rs752303790 |
432 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs200803962 CA4864736 |
434 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs376788877 CA4864733 |
437 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs762258094 CA4864732 |
437 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201550572 CA184489752 |
438 | A>T | No |
ClinGen 1000Genomes gnomAD |
|
|
CA184489733 rs936881132 |
439 | E>* | No |
ClinGen Ensembl |
|
|
CA184489709 rs972577819 |
439 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
rs774538058 CA4864731 |
441 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
CA4864730 rs147221349 |
442 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1462146790 CA372109957 |
445 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs763345856 CA4864729 |
446 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA372109939 rs1400362764 |
448 | P>A | No |
ClinGen gnomAD |
|
|
rs1185066303 CA372109937 |
448 | P>Q | No |
ClinGen TOPMed |
|
|
rs1185066303 CA372109936 |
448 | P>R | No |
ClinGen TOPMed |
|
|
rs368339951 CA4864728 |
449 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4864727 rs770028418 |
451 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 453 | V>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs745890032 CA4864726 |
453 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA372109902 rs1190050469 |
454 | K>E | No |
ClinGen gnomAD |
|
|
CA372109898 rs1243107380 |
454 | K>N | No |
ClinGen gnomAD |
|
|
CA4864724 rs761184687 |
454 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA4864723 rs192954126 |
455 | H>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4864722 rs777410482 |
455 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA184489596 rs1048052017 |
458 | A>T | No |
ClinGen Ensembl |
|
|
rs748034215 CA4864720 |
460 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs778924018 CA4864719 |
461 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA4864717 rs753347078 |
462 | P>A | No |
ClinGen ExAC gnomAD |
|
|
COSM286707 rs1399089654 CA372109811 |
468 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1315082569 CA372109779 |
473 | K>E | No |
ClinGen gnomAD |
|
|
CA4864714 rs752002112 |
477 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763584091 CA4864712 |
478 | E>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 481 | V>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1194849846 CA372109715 |
482 | S>C | No |
ClinGen gnomAD |
|
|
rs1186299674 CA372109683 |
486 | N>S | No |
ClinGen gnomAD |
|
|
rs952669571 CA184489477 |
490 | H>R | No |
ClinGen TOPMed |
|
|
rs765684086 CA4864710 |
491 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372109638 rs1305830375 |
492 | S>L | No |
ClinGen TOPMed |
|
|
CA4864709 rs374275355 |
494 | I>V | No |
ClinGen ESP ExAC gnomAD |
|
|
CA4864708 rs776662832 |
495 | I>N | No |
ClinGen ExAC gnomAD |
|
|
rs1206785997 CA372109578 |
498 | M>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs370560217 CA4864707 |
500 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs747187364 CA4864706 |
502 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA372109514 rs139687816 |
504 | T>K | No |
ClinGen ESP ExAC gnomAD |
|
|
CA4864704 rs139687816 |
504 | T>M | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1294871680 CA372109449 |
508 | I>V | No |
ClinGen gnomAD |
|
| TCGA novel | 509 | K>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| rs1563809035 | 510 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1429763324 CA372109278 |
515 | T>S | No |
ClinGen TOPMed |
|
|
rs1170468596 CA372109168 |
519 | Q>* | No |
ClinGen TOPMed |
|
|
rs1376583829 CA372109140 |
520 | R>I | No |
ClinGen TOPMed |
|
|
rs985548645 CA184489289 |
524 | S>N | No |
ClinGen Ensembl |
|
|
rs1463530965 CA372108987 |
527 | C>W | No |
ClinGen gnomAD |
|
|
CA4864699 rs779686104 |
528 | L>I | No |
ClinGen ExAC gnomAD |
|
|
CA4864698 rs755852551 |
529 | H>N | No |
ClinGen ExAC TOPMed |
|
|
CA372108840 rs1170441844 |
532 | N>S | No |
ClinGen gnomAD |
|
|
rs1464491114 CA372108809 |
533 | D>V | No |
ClinGen gnomAD |
|
|
rs750039063 CA4864697 |
536 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1207738651 CA372108746 |
536 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA372108615 rs1475347321 |
537 | T>I | No |
ClinGen gnomAD |
|
|
CA4864695 rs557557161 |
540 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA184489232 rs370469256 |
543 | S>G | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs753021928 CA4864694 |
543 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA372108440 rs1320458356 |
544 | D>G | No |
ClinGen TOPMed |
|
|
rs765774124 CA4864693 |
545 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA4864692 rs760017808 |
547 | T>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 548 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA372108344 rs1274839066 |
548 | E>G | No |
ClinGen gnomAD |
|
|
rs150624227 CA4864690 |
550 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 550 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4864688 rs773316677 |
551 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA372108262 rs1296337691 |
551 | T>N | No |
ClinGen TOPMed |
|
|
rs773316677 CA372108265 |
551 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA372108231 rs1393355514 |
553 | G>S | No |
ClinGen gnomAD |
|
|
CA372108217 rs1446238429 |
553 | G>V | No |
ClinGen gnomAD |
|
|
rs141881595 CA4864687 |
559 | Q>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA372108049 rs1330734543 |
560 | S>T | No |
ClinGen gnomAD |
|
|
rs1001039128 CA184489142 |
566 | D>V | No |
ClinGen TOPMed |
|
|
CA372107735 rs1379007108 |
569 | P>H | No |
ClinGen gnomAD |
|
|
rs1461601482 CA372107720 |
570 | Q>L | No |
ClinGen TOPMed |
|
|
CA4864684 rs768760434 |
576 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA4864683 rs749222801 |
577 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA372107468 rs1250680516 |
579 | Q>E | No |
ClinGen gnomAD |
|
|
CA4864682 COSM2155560 rs138343253 |
581 | R>C | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1456411514 CA372107416 |
581 | R>H | No |
ClinGen gnomAD |
|
|
rs1586822251 CA372105646 |
586 | S>G | No |
ClinGen Ensembl |
|
|
rs769191143 CA4864681 |
589 | N>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 590 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1031358156 CA184489124 |
592 | V>A | No |
ClinGen TOPMed |
|
|
CA372105519 rs1241507829 |
592 | V>I | No |
ClinGen gnomAD |
|
|
rs780739650 CA4864679 |
593 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372105477 rs1308657566 |
594 | T>K | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 595 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA372105437 rs1423824764 |
596 | E>K | No |
ClinGen TOPMed |
|
| TCGA novel | 597 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA184489102 rs999435573 |
597 | E>V | No |
ClinGen Ensembl |
|
|
CA372105367 rs1444565883 |
599 | N>S | No |
ClinGen gnomAD |
|
|
CA4864678 rs753111689 |
600 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA4864677 rs753111689 |
600 | R>T | No |
ClinGen ExAC gnomAD |
|
|
rs1327228140 CA372105284 |
602 | R>S | No |
ClinGen gnomAD |
|
|
CA372105270 rs1386705325 |
603 | A>T | No |
ClinGen gnomAD |
|
|
CA184489088 rs59843972 |
603 | A>V | No |
ClinGen Ensembl |
|
| TCGA novel | 606 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4864676 rs779237885 |
606 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs755548464 CA4864675 |
608 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA4864674 rs754351377 |
609 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372105109 rs1157533362 |
609 | R>K | No |
ClinGen gnomAD |
|
|
CA372105068 rs1437217290 |
612 | I>V | No |
ClinGen gnomAD |
|
|
rs1012005221 CA184489075 |
613 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA372105012 rs1343834706 |
614 | A>V | No |
ClinGen TOPMed |
|
|
rs767669976 CA4864670 |
615 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA4864671 rs750472738 |
615 | W>S | No |
ClinGen ExAC gnomAD |
|
|
CA4864668 rs530080011 |
617 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs762770128 CA4864666 |
619 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs762770128 CA372104927 |
619 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1366959819 CA372104921 |
619 | K>R | No |
ClinGen TOPMed |
|
|
CA184489016 rs1037725309 |
621 | K>E | No |
ClinGen Ensembl |
|
|
rs944300852 CA184489003 |
621 | K>I | No |
ClinGen TOPMed |
|
|
CA372104823 rs1383064305 |
625 | L>S | No |
ClinGen gnomAD |
|
|
rs940806601 CA184488986 |
628 | E>K | No |
ClinGen TOPMed |
|
| TCGA novel | 628 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs374123668 CA372104745 |
630 | M>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs374123668 CA4864663 |
630 | M>T | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 631 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA184488956 rs1049852109 |
631 | E>K | No |
ClinGen Ensembl |
|
|
rs745412395 CA4864662 |
632 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs1324469244 CA372104719 |
632 | I>V | No |
ClinGen TOPMed |
|
|
CA372104694 rs1417446625 |
633 | D>N | No |
ClinGen gnomAD |
|
|
CA372104672 rs1253907820 |
634 | E>* | No |
ClinGen Ensembl |
|
|
rs142156546 CA372104649 |
635 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4864661 rs142156546 |
635 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA372104641 rs567568377 |
636 | N>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs746663941 CA4864659 |
636 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs567568377 CA4864660 |
636 | N>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4864658 rs777344022 |
637 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA184488915 rs932753686 |
637 | A>V | No |
ClinGen Ensembl |
|
|
CA4864657 rs755354406 |
638 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA4864656 rs754149126 |
640 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA4864655 rs780453437 |
642 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA4864654 rs774111132 |
644 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA184488882 rs774111132 |
644 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372104373 rs1200884968 |
649 | P>S | No |
ClinGen TOPMed |
|
| TCGA novel | 650 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA184488832 rs914636574 |
651 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA372104326 rs1228778296 |
651 | D>N | No |
ClinGen gnomAD |
|
|
CA4864650 rs750514614 |
655 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4864649 rs138992353 |
655 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs762192099 CA4864648 |
656 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA184488816 rs980672094 |
657 | K>* | No |
ClinGen TOPMed gnomAD |
|
|
CA372104203 rs980672094 |
657 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA372104201 rs1310108542 |
657 | K>R | No |
ClinGen gnomAD |
|
|
CA372104187 rs1413346175 |
658 | S>A | No |
ClinGen gnomAD |
|
|
rs143390709 CA4864647 |
659 | G>E | No |
ClinGen ESP ExAC |
|
|
rs764354163 CA4864646 |
663 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs369760371 CA4864644 |
664 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1422721247 CA372103960 |
668 | T>I | No |
ClinGen gnomAD |
|
|
CA4864643 rs765138111 |
669 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA4864642 rs759506087 |
674 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759506087 CA372103837 |
674 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776073776 CA4864641 |
677 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA372103754 rs1399792171 |
677 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA372103614 rs1375246942 |
681 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs770435282 CA4864640 |
681 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs763856910 CA184488743 |
683 | Q>H | No |
ClinGen TOPMed |
|
|
rs746467900 CA4864639 |
684 | W>R | No |
ClinGen ExAC gnomAD |
|
|
rs1317791634 CA372103319 |
690 | Y>C | No |
ClinGen gnomAD |
|
|
rs1235450384 CA372103301 |
691 | D>G | No |
ClinGen gnomAD |
|
|
rs1284480369 CA372103192 |
695 | K>R | No |
ClinGen gnomAD |
|
|
rs780441689 CA4864635 |
698 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4864633 rs199937711 |
702 | T>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs756635705 CA4864634 |
702 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA372103044 rs1291807780 |
703 | D>A | No |
ClinGen TOPMed |
|
| TCGA novel | 703 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| rs1482470201 | 706 | S>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 710 | D>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4864630 rs751649497 |
712 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA4864627 rs752495337 |
723 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1179289648 CA372102635 |
723 | Y>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs956537213 CA184488651 |
724 | Y>C | No |
ClinGen TOPMed |
|
|
CA4864626 rs757146815 |
725 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372102611 rs1586821824 |
726 | Y>C | No |
ClinGen Ensembl |
|
|
rs1197485110 CA372102599 |
728 | S>R | No |
ClinGen Ensembl |
|
|
rs200418101 CA4864623 |
729 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs753655694 CA372102572 |
732 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA184488626 rs753655694 |
732 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs766259407 CA4864622 |
733 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA372102554 rs1586821796 |
734 | M>T | No |
ClinGen Ensembl |
|
|
rs760205823 CA4864621 |
738 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA372102517 rs1329297106 |
740 | L>F | No |
ClinGen gnomAD |
|
|
CA4864620 rs772674424 |
741 | R>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771757750 CA4864619 |
743 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA4864618 rs747820185 |
744 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA372102492 rs1563808486 |
744 | G>R | No |
ClinGen Ensembl |
|
|
CA372102446 rs1487226100 |
747 | R>I | No |
ClinGen gnomAD |
|
|
CA184488601 rs770197354 |
751 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770197354 CA4864615 |
751 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4864616 rs775783361 |
751 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs746160266 CA4864614 |
753 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4864613 rs781770196 |
756 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs747135351 CA4864611 COSM1095731 |
757 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs777988701 CA4864610 |
757 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs887744341 CA184488576 |
758 | G>A | No |
ClinGen TOPMed |
|
|
rs1449523424 CA372102311 |
759 | R>Q | No |
ClinGen gnomAD |
|
|
CA184488573 COSM1095730 rs137887004 |
759 | R>W | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP NCI-TCGA gnomAD |
|
rs765322229 CA4864607 |
761 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs777663399 CA372102289 |
761 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
CA184488557 rs777663399 |
761 | R>T | No |
ClinGen TOPMed gnomAD |
|
|
CA4864606 rs150304141 |
763 | S>C | No |
ClinGen ESP ExAC TOPMed |
|
|
rs755856015 CA4864605 |
764 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372102238 rs1460301892 |
765 | R>K | No |
ClinGen TOPMed |
|
|
rs766339290 CA4864604 |
765 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1274031728 CA372102150 |
771 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1475380535 CA372102140 |
772 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs749989829 CA4864602 |
773 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA4864600 rs761159679 |
775 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA4864598 rs768144433 |
777 | K>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 780 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 783 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1054980060 CA184488457 |
784 | I>T | No |
ClinGen Ensembl |
|
|
rs759985746 CA4864597 |
784 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1434286456 COSM1132855 CA372101934 |
787 | D>G | prostate [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA372101919 rs1563808385 |
788 | Y>C | No |
ClinGen Ensembl |
|
|
rs777114142 CA4864596 |
789 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 790 | L>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1403594071 CA372101897 |
790 | L>M | No |
ClinGen TOPMed |
|
|
CA372101883 rs1338952309 |
791 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs17854005 CA184488445 |
792 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1189858760 CA372101857 |
793 | K>R | No |
ClinGen gnomAD |
|
|
rs771624511 CA4864595 |
796 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1383215461 CA372101806 |
797 | E>K | No |
ClinGen gnomAD |
|
|
CA372101791 rs1216938276 |
798 | Q>E | No |
ClinGen gnomAD |
|
|
rs778359984 CA4864593 |
800 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs772210263 CA4864592 |
806 | K>I | No |
ClinGen ExAC gnomAD |
|
|
rs1277902604 CA372101619 |
808 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
rs748131999 CA4864590 |
809 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748131999 CA372101606 |
809 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372101511 rs1291805935 |
812 | E>G | No |
ClinGen gnomAD |
|
|
rs755120087 CA4864588 |
814 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1460246373 CA372101466 |
816 | E>Q | No |
ClinGen TOPMed |
|
|
rs1399650946 CA372101364 |
821 | R>I | No |
ClinGen gnomAD |
|
|
CA184488360 rs917815662 |
822 | Q>H | No |
ClinGen Ensembl |
|
|
rs1466567279 CA372101313 |
825 | S>* | No |
ClinGen gnomAD |
|
|
rs753678182 CA4864587 |
825 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA372101274 rs1463134569 |
827 | L>F | No |
ClinGen gnomAD |
|
| TCGA novel | 827 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4864586 rs779814219 |
830 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs988432609 CA184488347 |
834 | E>G | No |
ClinGen TOPMed |
|
|
rs1424851573 CA372101105 |
835 | N>K | No |
ClinGen gnomAD |
|
|
rs372360773 CA4864585 |
835 | N>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4864584 rs750366460 |
836 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA372101054 rs1183223912 |
838 | E>A | No |
ClinGen gnomAD |
|
|
rs761408638 CA4864582 |
839 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1236348384 CA372101013 |
840 | E>* | No |
ClinGen gnomAD |
|
|
CA184488329 rs775023918 |
842 | I>M | No |
ClinGen Ensembl |
|
|
CA4864581 rs750993826 |
842 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM130333 rs953096730 CA184488327 |
843 | D>N | upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs1258499317 CA372100927 |
844 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
CA372100915 rs1563808256 |
845 | Q>E | No |
ClinGen Ensembl |
|
|
CA4864580 rs763855358 |
845 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4864579 rs762498515 |
847 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1316314209 CA372100882 |
847 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA4864578 rs767017753 |
848 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs375235916 CA4864577 |
849 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4864576 rs761060097 |
850 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs573544945 CA4864575 |
851 | E>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4864573 rs1554635650 |
852 | T>A | No |
ClinGen Ensembl |
|
|
rs142746860 CA4864572 |
857 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA372100599 rs1170424729 |
858 | W>* | No |
ClinGen gnomAD |
|
| TCGA novel | 860 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA372100498 rs748294823 |
862 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs144367640 CA4864570 |
862 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs745749076 CA372100392 |
866 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4864567 rs780185709 |
866 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA4864568 rs745749076 |
866 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750170249 CA4864565 |
872 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755918638 CA4864566 |
872 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1266956475 CA372100247 |
873 | D>G | No |
ClinGen gnomAD |
|
|
CA4864564 rs781221058 |
873 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA184488275 rs112845592 |
874 | D>R | No |
ClinGen Ensembl |
No associated diseases with Q9UKY1
9 regional properties for Q9UKY1
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Homeobox domain | 284 - 346 | IPR001356-1 |
| domain | Homeobox domain | 464 - 526 | IPR001356-2 |
| domain | Homeobox domain | 569 - 630 | IPR001356-3 |
| domain | Homeobox domain | 660 - 722 | IPR001356-4 |
| domain | Homeobox domain | 777 - 832 | IPR001356-5 |
| domain | Zinc finger C2H2-type | 70 - 93 | IPR013087-1 |
| domain | Zinc finger C2H2-type | 102 - 130 | IPR013087-2 |
| domain | Homez, homeobox domain | 785 - 822 | IPR024578 |
| domain | ZHX, C2H2 finger domain | 99 - 149 | IPR041057 |
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| chromatin | The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
5 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| DNA-binding transcription factor activity | A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. |
| DNA-binding transcription factor activity, RNA polymerase II-specific | A DNA-binding transcription factor activity that modulates the transcription of specific gene sets transcribed by RNA polymerase II. |
| metal ion binding | Binding to a metal ion. |
| protein heterodimerization activity | Binding to a nonidentical protein to form a heterodimer. |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| cell differentiation | The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state. |
| negative regulation of DNA-templated transcription | Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription. |
| negative regulation of transcription by RNA polymerase II | Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II. |
| regulation of transcription by RNA polymerase II | Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9Y6X8 | ZHX2 | Zinc fingers and homeoboxes protein 2 | Homo sapiens (Human) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MASRRKSTTP | CMVLASEQDP | DLELISDLDE | GPPVLTPVEN | TRAESISSDE | EVHESVDSDN |
| 70 | 80 | 90 | 100 | 110 | 120 |
| QQNKKVEGGY | ECKYCTFQTP | DLNMFTFHVD | SEHPNVVLNS | SYVCVECNFL | TKRYDALSEH |
| 130 | 140 | 150 | 160 | 170 | 180 |
| NLKYHPGEEN | FKLTMVKRNN | QTIFEQTIND | LTFDGSFVKE | ENAEQAESTE | VSSSGISISK |
| 190 | 200 | 210 | 220 | 230 | 240 |
| TPIMKMMKNK | VENKRIAVHH | NSVEDVPEEK | ENEIKPDREE | IVENPSSSAS | ESNTSTSIVN |
| 250 | 260 | 270 | 280 | 290 | 300 |
| RIHPSTASTV | VTPAAVLPGL | AQVITAVSAQ | QNSNLIPKVL | IPVNSIPTYN | AALDNNPLLL |
| 310 | 320 | 330 | 340 | 350 | 360 |
| NTYNKFPYPT | MSEITVLSAQ | AKYTEEQIKI | WFSAQRLKHG | VSWTPEEVEE | ARRKQFNGTV |
| 370 | 380 | 390 | 400 | 410 | 420 |
| HTVPQTITVI | PTHISTGSNG | LPSILQTCQI | VGQPGLVLTQ | VAGTNTLPVT | APIALTVAGV |
| 430 | 440 | 450 | 460 | 470 | 480 |
| PSQNNIQKSQ | VPAAQPTAET | KPATAAVPTS | QSVKHETALV | NPDSFGIRAK | KTKEQLAELK |
| 490 | 500 | 510 | 520 | 530 | 540 |
| VSYLKNQFPH | DSEIIRLMKI | TGLTKGEIKK | WFSDTRYNQR | NSKSNQCLHL | NNDSSTTIII |
| 550 | 560 | 570 | 580 | 590 | 600 |
| DSSDETTESP | TVGTAQPKQS | WNPFPDFTPQ | KFKEKTAEQL | RVLQASFLNS | SVLTDEELNR |
| 610 | 620 | 630 | 640 | 650 | 660 |
| LRAQTKLTRR | EIDAWFTEKK | KSKALKEEKM | EIDESNAGSS | KEEAGETSPA | DESGAPKSGS |
| 670 | 680 | 690 | 700 | 710 | 720 |
| TGKICKKTPE | QLHMLKSAFV | RTQWPSPEEY | DKLAKESGLA | RTDIVSWFGD | TRYAWKNGNL |
| 730 | 740 | 750 | 760 | 770 | 780 |
| KWYYYYQSAN | SSSMNGLSSL | RKRGRGRPKG | RGRGRPRGRP | RGSKRINNWD | RGPSLIKFKT |
| 790 | 800 | 810 | 820 | 830 | 840 |
| GTAILKDYYL | KHKFLNEQDL | DELVNKSHMG | YEQVREWFAE | RQRRSELGIE | LFEENEEEDE |
| 850 | 860 | 870 | |||
| VIDDQEEDEE | ETDDSDTWEP | PRHVKRKLSK | SDD |