Q9UHB9
Gene name |
SRP68 |
Protein name |
Signal recognition particle subunit SRP68 |
Names |
SRP68, Signal recognition particle 68 kDa protein |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:6730 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
9 structures for Q9UHB9
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 4P3E | X-ray | 350 A | C | 47-254 | PDB |
| 4P3F | X-ray | 170 A | A/B | 47-254 | PDB |
| 5M72 | X-ray | 160 A | B | 546-614 | PDB |
| 5M73 | X-ray | 340 A | C/G | 60-254 | PDB |
| 5WRV | X-ray | 170 A | A | 509-614 | PDB |
| 7NFX | EM | 320 A | u | 1-627 | PDB |
| 7QWQ | EM | 283 A | v | 1-627 | PDB |
| 8QVW | EM | 300 A | A | 52-627 | PDB |
| AF-Q9UHB9-F1 | Predicted | AlphaFoldDB |
418 variants for Q9UHB9
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA401090268 rs1228286844 |
2 | A>V | No |
ClinGen TOPMed |
|
|
CA401090235 rs1387746109 |
3 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs982853222 CA294124244 |
4 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA401090224 rs1424012847 |
5 | K>E | No |
ClinGen gnomAD |
|
|
rs745681553 CA294124227 |
6 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8780150 rs771810762 |
6 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA8780147 rs770923950 |
7 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs778761206 CA8780148 |
7 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs755696245 CA8780144 |
8 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 8 | P>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs777395419 CA8780145 |
8 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA8780141 rs751979771 |
10 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751979771 CA401090110 |
10 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751979771 CA8780140 |
10 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs888245354 CA294124188 |
10 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
CA8780138 rs763571966 |
11 | G>S | No |
ClinGen ExAC |
|
|
CA294124184 rs200964219 |
12 | G>S | No |
ClinGen Ensembl |
|
|
CA401090032 rs1306845950 |
13 | G>D | No |
ClinGen gnomAD |
|
|
CA8780134 rs765398337 |
14 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs776861075 CA8780132 |
15 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA294124132 rs1041428323 |
16 | S>C | No |
ClinGen TOPMed |
|
|
CA401089974 rs1041428323 |
16 | S>G | No |
ClinGen TOPMed |
|
|
rs572529275 CA8780122 |
17 | G>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1250333138 CA401089853 |
18 | G>D | No |
ClinGen gnomAD |
|
|
CA8780120 rs770836109 |
18 | G>S | No |
ClinGen ExAC |
|
|
CA401089841 rs1174920733 |
19 | G>C | No |
ClinGen TOPMed |
|
|
CA401089658 rs377012082 |
22 | S>C | No |
ClinGen ESP TOPMed |
|
| TCGA novel | 22 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8780108 rs377012082 |
22 | S>R | No |
ClinGen ESP TOPMed |
|
|
rs1194959914 CA401089553 |
24 | G>D | No |
ClinGen TOPMed |
|
|
rs777603456 CA8780104 |
24 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401089557 rs777603456 |
24 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747625446 CA8780101 |
25 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA8780102 rs769298926 |
25 | G>S | No |
ClinGen ExAC |
|
|
CA401089488 rs754741659 |
26 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780927130 CA8780098 |
26 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780927130 CA401089491 |
26 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8780097 rs754741659 |
26 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751957574 CA8780093 |
27 | S>G | No |
ClinGen ExAC TOPMed |
|
|
rs780614140 CA8780090 |
27 | S>I | No |
ClinGen ExAC gnomAD |
|
|
CA8780089 rs758799435 |
27 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1281532095 CA401089415 |
28 | G>D | No |
ClinGen TOPMed |
|
|
CA401089353 rs1457075717 |
30 | G>E | No |
ClinGen gnomAD |
|
|
CA8780083 rs757301105 |
31 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA401089315 rs1459207149 |
31 | R>H | No |
ClinGen gnomAD |
|
|
CA8780080 rs760939812 |
33 | A>G | No |
ClinGen ExAC |
|
|
rs766126111 CA8780078 |
34 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401089170 rs773145063 |
35 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401089202 rs1189598998 |
35 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA8780076 rs773145063 |
35 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 36 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8780075 rs769624821 |
36 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs747691330 COSM437424 CA8780074 |
40 | E>G | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
| TCGA novel | 41 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs768400729 CA401088914 |
42 | E>* | No |
ClinGen ExAC gnomAD |
|
|
CA8780072 rs768400729 |
42 | E>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA8780071 rs746698013 |
42 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA8780070 rs373040048 |
43 | R>G | No |
ClinGen ESP ExAC gnomAD |
|
|
CA8780069 rs758737275 |
43 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA294123946 rs868848227 |
46 | A>V | No |
ClinGen Ensembl |
|
|
CA401088735 rs1322070523 |
47 | G>E | No |
ClinGen gnomAD |
|
|
CA8780068 rs746229075 |
48 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs776550722 CA8780066 |
51 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8780065 rs753894919 |
53 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA401088598 rs753894919 |
53 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs764202545 CA8780064 |
54 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA294123894 rs918205064 |
55 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1470287869 CA401088540 |
57 | S>R | No |
ClinGen TOPMed |
|
|
rs756221342 CA8780063 |
57 | S>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 61 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1248724090 CA401088446 |
62 | I>L | No |
ClinGen gnomAD |
|
|
CA401087702 rs1163984978 |
65 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs759152561 CA8780033 |
66 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA401087563 rs1366450661 |
70 | Q>H | No |
ClinGen gnomAD |
|
|
CA294122376 rs913735678 |
73 | H>R | No |
ClinGen TOPMed |
|
|
rs1330381530 CA401087504 |
73 | H>Y | No |
ClinGen TOPMed |
|
|
rs1598272653 CA401087480 |
74 | G>C | No |
ClinGen Ensembl |
|
|
CA8780031 rs771151407 |
76 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA8780032 rs774084915 |
76 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 79 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs939293655 CA294122363 |
80 | F>C | No |
ClinGen TOPMed |
|
|
rs1202395010 CA401087275 |
82 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA401087204 rs1482618453 |
83 | Y>* | No |
ClinGen TOPMed |
|
|
CA401086372 rs773628297 |
85 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763306027 CA8780011 |
85 | G>S | No |
ClinGen ExAC |
|
|
CA8780010 rs773628297 |
85 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8780007 rs777223002 |
89 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs777223002 CA401086267 |
89 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401086254 rs1222515803 |
89 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs768565696 CA8780006 |
92 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA8780005 rs780073296 |
93 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA8780004 rs780073296 |
93 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs149867603 CA8780003 |
93 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401086126 rs1390520157 |
94 | L>I | No |
ClinGen gnomAD |
|
|
CA8780001 rs777753629 |
95 | R>* | No |
ClinGen ExAC gnomAD |
|
|
rs756006076 COSM1227566 CA8780000 |
95 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA8779998 rs767503692 |
97 | T>I | No |
ClinGen ExAC |
|
|
CA8779999 rs376285977 |
97 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs546469786 CA8779997 |
98 | L>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1393959836 CA401086006 |
99 | N>S | No |
ClinGen gnomAD |
|
|
CA294117150 rs77806267 |
100 | F>L | No |
ClinGen Ensembl |
|
| TCGA novel | 101 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401085978 rs1188756816 |
101 | K>R | No |
ClinGen gnomAD |
|
|
CA294117141 rs199566111 |
103 | G>S | No |
ClinGen Ensembl |
|
|
CA401085882 rs1333474694 |
107 | K>T | No |
ClinGen gnomAD |
|
|
rs1446926784 CA401085841 |
109 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA8779996 rs751151274 |
109 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA294117134 rs772868823 |
113 | V>M | No |
ClinGen Ensembl |
|
|
CA8779995 rs766005501 |
114 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8779994 rs762645949 |
117 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA8779993 rs773532394 |
118 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs151318558 CA8779991 |
120 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA294117080 rs939803958 |
121 | N>D | No |
ClinGen gnomAD |
|
|
rs1414921539 CA401083850 |
123 | Y>F | No |
ClinGen gnomAD |
|
|
rs1369731753 CA401083796 |
124 | L>V | No |
ClinGen Ensembl |
|
|
CA401083701 rs1190582131 |
127 | V>F | No |
ClinGen gnomAD |
|
| TCGA novel | 129 | M>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1185994319 CA401083571 |
130 | D>V | No |
ClinGen TOPMed |
|
|
rs759703530 CA8779968 |
132 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs769689934 CA294114623 |
133 | R>G | No |
ClinGen gnomAD |
|
|
rs774648889 CA8779967 |
134 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA294114615 rs774648889 |
134 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA401083309 rs1204046009 |
138 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA401083314 rs1204046009 |
138 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1395046669 CA401083298 |
139 | M>V | No |
ClinGen TOPMed |
|
|
rs1322595991 CA401083074 |
144 | E>G | No |
ClinGen gnomAD |
|
|
rs370884129 CA8779965 |
147 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs140122208 CA294114585 |
148 | E>A | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs781093453 CA8779964 |
149 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8779963 rs768450844 |
150 | R>* | No |
ClinGen ExAC gnomAD |
|
|
COSM173158 CA8779962 rs746905444 |
150 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs778532040 CA8779958 COSM984592 |
152 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA8779959 rs749936481 |
152 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1351321932 CA401082652 |
154 | H>Y | No |
ClinGen gnomAD |
|
|
CA294114544 rs144290534 |
156 | L>S | No |
ClinGen ESP |
|
|
CA8779957 rs202164432 |
158 | R>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs764559057 CA8779955 |
160 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA401082477 rs1160494460 |
160 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA8779953 rs753200088 |
163 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401082349 rs1176738782 |
165 | H>P | No |
ClinGen gnomAD |
|
| TCGA novel | 167 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8779950 rs144739272 |
171 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs771040745 CA8779949 |
171 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs144739272 CA8779951 |
171 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401082038 rs1268549017 |
174 | E>D | No |
ClinGen gnomAD |
|
|
rs763278696 CA8779948 |
175 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs763278696 CA401082017 |
175 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs773341186 CA8779947 |
177 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200003470 CA8779946 |
177 | R>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA294114452 rs1055404586 |
178 | V>M | No |
ClinGen gnomAD |
|
|
rs941884846 CA294114443 |
183 | K>R | No |
ClinGen gnomAD |
|
| TCGA novel | 185 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1297382144 CA401081683 |
186 | A>T | No |
ClinGen gnomAD |
|
|
rs1390272750 CA401081652 |
187 | Q>R | No |
ClinGen TOPMed |
|
|
CA8779925 rs771974589 |
190 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA401080364 rs1171890777 |
191 | A>T | No |
ClinGen gnomAD |
|
|
rs1424245362 CA401080335 |
192 | Y>H | No |
ClinGen TOPMed |
|
|
rs1477743526 CA401080238 |
196 | M>L | No |
ClinGen TOPMed |
|
|
CA8779922 rs770417994 |
196 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA8779921 rs748755372 |
198 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA8779920 rs777477411 |
198 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1427551873 CA401080098 |
200 | E>G | No |
ClinGen TOPMed |
|
|
rs1486635307 CA401080051 |
201 | H>Q | No |
ClinGen gnomAD |
|
|
rs904537990 CA294111924 |
201 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA401080005 rs1297786826 |
203 | E>G | No |
ClinGen TOPMed |
|
|
CA401079878 rs1277544984 |
207 | A>V | No |
ClinGen gnomAD |
|
|
CA401079868 rs1342426334 |
208 | I>V | No |
ClinGen gnomAD |
|
|
rs1271506890 CA401079755 |
210 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs748504706 CA8779918 |
211 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA8779917 rs781721284 |
213 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA401079653 rs1567934094 |
215 | K>E | No |
ClinGen Ensembl |
|
|
rs757110630 CA14488431 |
215 | K>R | No |
ClinGen TOPMed |
|
|
rs1336386658 CA401079495 |
218 | Y>C | No |
ClinGen gnomAD |
|
|
CA8779901 rs377303615 |
219 | E>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs375954134 CA294111674 |
224 | A>G | No |
ClinGen ESP |
|
|
CA8779900 rs781017054 |
226 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1435528649 CA401079082 |
227 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1459130324 CA401078847 |
233 | Y>C | No |
ClinGen TOPMed |
|
|
CA8779898 rs141509827 |
236 | R>C | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
|
rs1415410418 CA401078693 |
236 | R>H | No |
ClinGen gnomAD |
|
|
rs1196663586 CA401078681 |
237 | V>M | No |
ClinGen TOPMed |
|
|
rs1567933906 CA401078616 |
238 | E>V | No |
ClinGen Ensembl |
|
| TCGA novel | 241 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1164068261 CA401078430 |
243 | N>D | No |
ClinGen gnomAD |
|
|
rs780602963 CA8779897 |
245 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA401078380 rs780602963 |
245 | R>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 245 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 248 | A>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8779896 rs758883117 |
248 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401078252 rs1179108206 |
248 | A>V | No |
ClinGen gnomAD |
|
|
CA294111657 rs993307263 |
249 | Y>F | No |
ClinGen TOPMed |
|
|
CA401077187 rs1349984560 |
252 | G>E | No |
ClinGen gnomAD |
|
|
rs372152760 CA8779877 |
254 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs563879201 CA8779876 |
258 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8779874 rs757269204 |
260 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA401076996 rs1397045387 |
261 | M>I | No |
ClinGen TOPMed |
|
|
rs1316079943 CA401077015 |
261 | M>T | No |
ClinGen gnomAD |
|
|
CA8779872 rs777961118 |
262 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA8779870 rs575036031 |
268 | G>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8779869 rs150793464 |
270 | T>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs201735400 CA8779867 |
272 | G>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8779866 rs765266237 |
272 | G>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 272 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401076718 rs1402990988 |
273 | L>V | No |
ClinGen TOPMed |
|
|
CA401076685 rs138822586 |
274 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8779864 rs768329856 |
275 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1213180559 CA401076679 |
275 | A>T | No |
ClinGen gnomAD |
|
|
rs768329856 CA8779863 |
275 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8779859 rs746256799 |
279 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1286981207 CA401076425 |
280 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA401076416 rs1213843818 |
281 | L>F | No |
ClinGen gnomAD |
|
|
CA401076384 rs1273037478 |
284 | Q>R | No |
ClinGen TOPMed |
|
|
CA8779844 rs774947036 |
286 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767203079 CA401076360 |
286 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA8779843 rs767203079 |
286 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA401076336 rs1567932207 |
288 | K>R | No |
ClinGen Ensembl |
|
|
CA8779842 rs759881233 |
291 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771398172 CA8779840 |
293 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs749757006 CA8779839 |
296 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA8779838 COSM1386128 rs200168660 |
302 | T>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs1167903961 CA401076075 |
306 | K>N | No |
ClinGen TOPMed |
|
|
rs142178082 CA8779834 |
307 | I>N | No |
ClinGen ESP ExAC gnomAD |
|
|
rs142178082 CA8779835 |
307 | I>T | No |
ClinGen ESP ExAC gnomAD |
|
|
rs745633872 CA8779833 |
308 | D>A | No |
ClinGen ExAC gnomAD |
|
|
CA8779832 rs778889146 |
310 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8779831 rs757149057 |
311 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs753777388 CA8779830 |
311 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 315 | L>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401075866 rs1231345263 |
317 | L>V | No |
ClinGen gnomAD |
|
|
rs143508929 CA8779826 |
321 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1370539839 CA401075647 |
324 | I>V | No |
ClinGen gnomAD |
|
|
rs1345508248 CA401075623 |
325 | V>F | No |
ClinGen gnomAD |
|
|
CA401141695 rs1261166667 |
327 | A>P | No |
ClinGen gnomAD |
|
|
CA8779814 CA294154964 rs148814451 |
329 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs777566753 CA8779812 |
330 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA401141675 rs1307934481 |
330 | E>K | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 331 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs199545005 CA294154947 |
332 | T>A | No |
ClinGen 1000Genomes |
|
|
rs752117551 CA8779810 COSM1386127 |
335 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
COSM1227565 CA8779809 rs780715550 |
335 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs752117551 CA401141638 |
335 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401141621 COSM562430 rs1407704953 |
338 | E>Q | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA401141603 rs1455836866 |
340 | M>I | No |
ClinGen gnomAD |
|
|
CA8779808 rs754507116 |
340 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1343475289 CA401141599 |
341 | L>V | No |
ClinGen gnomAD |
|
|
rs1567929228 CA401141575 |
344 | C>Y | No |
ClinGen Ensembl |
|
|
rs766028128 CA8779806 |
345 | R>W | No |
ClinGen ExAC |
|
|
rs750854248 CA8779804 |
347 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401141552 rs1287782451 |
348 | I>V | No |
ClinGen TOPMed |
|
|
rs1432320620 CA401141536 |
350 | V>M | No |
ClinGen gnomAD |
|
|
rs762419835 CA8779802 |
352 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA8779803 rs765636266 |
352 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA8779801 rs777031913 |
353 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA401141510 rs145478645 CA8779799 |
354 | E>D | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1323770653 CA401141505 |
355 | L>P | No |
ClinGen TOPMed |
|
|
CA401141417 rs1230165173 |
365 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA401141406 rs1445132721 |
367 | E>A | No |
ClinGen TOPMed |
|
|
CA401141402 rs775769675 |
367 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772393796 CA8779780 |
368 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs866200871 CA294152870 |
373 | V>L | No |
ClinGen Ensembl |
|
|
rs1415957990 CA401141362 |
374 | S>P | No |
ClinGen gnomAD |
|
|
CA401141319 rs1332315946 |
380 | H>D | No |
ClinGen gnomAD |
|
|
CA401141317 rs1395659288 |
380 | H>R | No |
ClinGen gnomAD |
|
|
CA401141150 rs1331083026 |
384 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs779576471 CA8779769 |
390 | T>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA401141094 rs757875266 |
390 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8779768 rs757875266 |
390 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1484205299 CA401141081 |
392 | I>F | No |
ClinGen TOPMed |
|
|
rs995509999 CA294151753 |
392 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs778442479 CA8779766 |
394 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs201759768 CA8779765 |
394 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1173180073 CA401141017 |
398 | M>T | No |
ClinGen TOPMed |
|
|
CA401141019 rs1179171543 |
398 | M>V | No |
ClinGen gnomAD |
|
|
rs1428738626 CA401141005 |
399 | A>D | No |
ClinGen gnomAD |
|
|
CA401141009 rs1567927232 |
399 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA8779763 rs764685294 |
400 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA401141001 rs764685294 |
400 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
CA401140986 rs1237930618 |
401 | G>D | No |
ClinGen gnomAD |
|
| TCGA novel | 402 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA294151745 rs1058617 |
403 | Q>H | No |
ClinGen Ensembl |
|
|
CA8779762 rs532891814 |
403 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8779761 rs753288281 |
405 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1351442694 CA401140935 |
407 | L>P | No |
ClinGen gnomAD |
|
|
rs1464871698 CA401140926 |
408 | Q>L | No |
ClinGen gnomAD |
|
|
CA401140920 rs1298062276 |
409 | Q>* | No |
ClinGen TOPMed |
|
|
CA8779759 rs759551219 |
410 | Q>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766579454 CA8779756 |
415 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA8779754 rs143880770 |
417 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs377369805 CA8779753 |
417 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8779755 rs143880770 |
417 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA294151694 rs56276889 |
418 | S>P | No |
ClinGen gnomAD |
|
|
CA401140815 rs1567927162 |
419 | P>H | No |
ClinGen Ensembl |
|
|
CA8779752 rs746905246 |
419 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs745371890 CA8779749 |
420 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200440391 COSM247599 CA8779750 |
420 | R>W | Variant assessed as Somatic; 0.0 impact. prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA401140766 rs1313661999 |
425 | I>F | No |
ClinGen TOPMed |
|
|
rs778621143 CA8779748 |
426 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
COSM1386123 CA401140735 rs1211586857 |
428 | Y>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA401140715 rs1479184154 |
431 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA401140649 rs1212468380 |
438 | L>F | No |
ClinGen gnomAD |
|
|
rs758492125 CA8779721 |
440 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA8779720 rs750584215 |
442 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA401140611 rs1341229876 |
443 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
CA401140614 rs1341229876 |
443 | G>S | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 444 | L>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs146630780 CA8779719 |
445 | E>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1598258741 CA401140585 |
446 | E>K | No |
ClinGen Ensembl |
|
|
rs61742607 CA294151078 |
447 | D>A | No |
ClinGen Ensembl |
|
|
rs1195293080 CA401140559 |
448 | K>Q | No |
ClinGen TOPMed |
|
|
rs752545548 CA8779717 |
448 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8779716 rs767466878 |
449 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA401140521 rs144469138 |
451 | Q>H | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA8779715 rs575649482 |
454 | I>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8779714 rs575649482 |
454 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1426259009 CA401140403 |
464 | Y>H | No |
ClinGen gnomAD |
|
|
CA8779684 rs745924652 |
468 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs1284387574 CA401139953 |
471 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA401139944 rs1233384417 |
472 | S>T | No |
ClinGen TOPMed |
|
|
CA401139927 rs1278300460 |
473 | Y>C | No |
ClinGen TOPMed |
|
|
CA401139912 rs1374270682 |
474 | V>E | No |
ClinGen gnomAD |
|
|
rs79782892 CA8779682 |
474 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8779681 rs749412951 |
477 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1295762372 CA401139826 |
480 | S>G | No |
ClinGen gnomAD |
|
|
rs778060675 CA8779680 |
480 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs751426983 CA8779679 |
480 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1374813561 CA401139809 |
481 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs199927539 CA8779676 |
486 | Y>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs764787527 CA8779674 |
487 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA401139708 rs1269234033 |
488 | R>T | No |
ClinGen TOPMed gnomAD |
|
|
CA294149911 rs866713891 |
491 | K>Q | No |
ClinGen Ensembl |
|
|
CA401139668 rs1436010342 |
492 | Y>C | No |
ClinGen TOPMed |
|
|
CA401139646 rs1260788909 |
494 | N>I | No |
ClinGen gnomAD |
|
| TCGA novel | 494 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401139631 rs1334454423 |
496 | V>I | No |
ClinGen TOPMed |
|
|
rs115675693 CA8779671 |
497 | N>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA294149895 rs759300590 |
500 | A>G | No |
ClinGen Ensembl |
|
|
rs150844153 CA8779669 |
502 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1234612735 CA401139525 |
506 | S>T | No |
ClinGen gnomAD |
|
|
rs1338477330 CA401139409 |
512 | D>V | No |
ClinGen gnomAD |
|
|
CA294147960 rs968446364 |
513 | V>A | No |
ClinGen Ensembl |
|
|
rs1285895509 CA401139404 |
513 | V>M | No |
ClinGen gnomAD |
|
|
CA401139394 rs1396810490 |
514 | Q>L | No |
ClinGen gnomAD |
|
|
rs1301321075 CA401139381 |
516 | L>F | No |
ClinGen gnomAD |
|
|
CA401139374 rs1598256059 |
517 | I>T | No |
ClinGen Ensembl |
|
|
CA294147958 rs1021716893 |
517 | I>V | No |
ClinGen Ensembl |
|
|
rs760417069 CA8779652 |
520 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs775156164 CA401139352 |
521 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA8779650 rs767821341 |
521 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs767821341 COSM216406 CA294147942 |
521 | R>Q | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs775156164 COSM1386121 CA8779651 |
521 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA401139345 COSM1303367 rs1314294204 |
522 | S>L | Variant assessed as Somatic; impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA8779648 rs142359874 |
524 | K>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8779642 rs781574834 |
530 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8779643 rs781574834 |
530 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 531 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401139285 rs1455798090 |
532 | I>V | No |
ClinGen gnomAD |
|
|
rs267605058 CA294147861 |
533 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA401139259 rs1285789612 |
534 | D>V | No |
ClinGen TOPMed |
|
|
rs577371998 CA8779617 |
535 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8779616 rs755645051 |
536 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780799771 CA8779614 |
537 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8779612 rs75353721 |
538 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1387920439 CA401139227 |
539 | H>R | No |
ClinGen gnomAD |
|
|
CA294147430 rs200920342 COSM3937572 |
539 | H>Y | oesophagus [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
| TCGA novel | 542 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1162187356 CA401139208 |
542 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA294147406 rs112912450 |
546 | S>P | No |
ClinGen Ensembl |
|
|
rs1438170130 CA401139153 |
550 | D>V | No |
ClinGen gnomAD |
|
|
CA8779606 rs761975458 |
551 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762787380 CA8779583 |
555 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA8779584 rs767689952 |
555 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769606132 CA8779581 |
557 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8779582 rs140566396 |
557 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 558 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8779579 rs776560523 |
563 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401139050 rs1598255354 |
564 | D>A | No |
ClinGen Ensembl |
|
|
CA8779578 rs376006756 |
565 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs376006756 CA8779577 |
565 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8779576 rs779747555 |
569 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA401139024 rs1598255340 |
569 | T>P | No |
ClinGen Ensembl |
|
|
CA294147102 rs997501607 |
572 | A>T | No |
ClinGen Ensembl |
|
|
rs1180254232 CA401138976 |
576 | H>Y | No |
ClinGen TOPMed |
|
|
rs1359311603 CA401138962 |
578 | P>A | No |
ClinGen gnomAD |
|
|
CA401138955 rs758039068 |
579 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8779575 rs758039068 |
579 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8779574 rs746215653 |
580 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA294147082 rs964640826 |
582 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA8779573 rs368302170 |
583 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401138919 rs1478464430 |
585 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1425851936 CA401138907 |
586 | C>Y | No |
ClinGen gnomAD |
|
|
CA401138874 rs1367730040 |
589 | L>S | No |
ClinGen TOPMed gnomAD |
|
|
CA8779572 rs375515786 COSM285358 |
590 | F>L | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA gnomAD |
| TCGA novel | 592 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 594 | A>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401138825 rs1475125881 |
594 | A>T | No |
ClinGen gnomAD |
|
|
CA8779571 rs199952983 |
595 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1212537967 CA401138804 |
596 | N>S | No |
ClinGen gnomAD |
|
|
rs368075300 CA294147061 |
597 | H>P | No |
ClinGen ESP |
|
|
CA401138788 rs1304815390 |
597 | H>Q | No |
ClinGen TOPMed |
|
|
CA401138793 rs368075300 |
597 | H>R | No |
ClinGen ESP |
|
|
rs1440440687 CA401138787 |
598 | V>M | No |
ClinGen gnomAD |
|
|
CA8779570 rs532879908 |
601 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1598255234 CA401138746 |
602 | P>R | No |
ClinGen Ensembl |
|
|
CA8779569 rs756248465 |
602 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA294147047 rs184600542 |
603 | L>F | No |
ClinGen 1000Genomes |
|
|
CA401138726 rs1337425333 |
604 | E>D | No |
ClinGen TOPMed |
|
|
rs1320001350 CA401138722 |
605 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA8779568 rs752769300 |
606 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1011402533 CA294147037 |
606 | K>N | No |
ClinGen Ensembl |
|
|
rs1017979136 CA294147038 |
606 | K>R | No |
ClinGen Ensembl |
|
|
CA294147035 rs544057031 |
609 | Q>K | No |
ClinGen 1000Genomes gnomAD |
|
|
CA8779567 rs767746849 |
610 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA8779566 rs759635517 |
611 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751826261 CA8779565 |
616 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764952505 CA8779564 |
617 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs528838856 CA294147022 |
617 | G>V | No |
ClinGen Ensembl |
|
|
rs1030439731 CA294147021 |
619 | I>V | No |
ClinGen TOPMed |
|
|
rs763861096 CA294147020 |
623 | F>S | No |
ClinGen Ensembl |
No associated diseases with Q9UHB9
1 regional properties for Q9UHB9
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Signal recognition particle subunit SRP68, RNA-binding domain | 61 - 249 | IPR034652 |
7 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). |
| focal adhesion | A cell-substrate junction that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments. In insects focal adhesion has also been referred to as hemi-adherens junction (HAJ). |
| nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
| ribosome | An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins. |
| signal recognition particle | A complex of protein and RNA which facilitates translocation of proteins across membranes. |
| signal recognition particle, endoplasmic reticulum targeting | A ribonucleoprotein particle of 325 kDa composed of a 7S (300 nucleotide) RNA molecule and a complex of six different polypeptides. This binds both to the N-terminal signal peptide for proteins destined for the endoplasmic reticulum as they emerge from the large ribosomal subunit and also to the ribosome. This binding arrests further translation thereby preventing the proteins from being released into the cytosol. The SRP-ribosome complex then diffuses to the endoplasmic reticulum where it is bound to the signal recognition particle receptor, which allows resumption of protein synthesis and facilitates the passage of the growing polypeptide chain through the translocon. Through a process involving GTP hydrolysis, the SRP-SRP receptor complex dissociates and SRP returns to the cytosol. Of the six polypeptides of SRP the 54 kDa subunit (SRP54) is the central player. It contains an N-terminal GTPase domain and a C-terminal domain that binds directly to the signal peptide and the SRP RNA. Examples of this component are found in Mus musculus, Saccharomyces cerevisiae and Arabidopsis thaliana. |
5 GO annotations of molecular function
| Name | Definition |
|---|---|
| 7S RNA binding | Binding to a 7S RNA, the RNA component of the signal recognition particle (SRP). |
| endoplasmic reticulum signal peptide binding | Binding to an endoplasmic reticulum signal peptide, a specific peptide sequence that acts as a signal to localize the protein within the endoplasmic reticulum. |
| protein domain specific binding | Binding to a specific domain of a protein. |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
| signal recognition particle binding | Binding to a signal recognition particle. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| response to xenobiotic stimulus | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a xenobiotic, a compound foreign to the organim exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical. |
| SRP-dependent cotranslational protein targeting to membrane | The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAAEKQVPGG | GGGGGSGGGG | GSGGGGSGGG | RGAGGEENKE | NERPSAGSKA | NKEFGDSLSL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| EILQIIKESQ | QQHGLRHGDF | QRYRGYCSRR | QRRLRKTLNF | KMGNRHKFTG | KKVTEELLTD |
| 130 | 140 | 150 | 160 | 170 | 180 |
| NRYLLLVLMD | AERAWSYAMQ | LKQEANTEPR | KRFHLLSRLR | KAVKHAEELE | RLCESNRVDA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| KTKLEAQAYT | AYLSGMLRFE | HQEWKAAIEA | FNKCKTIYEK | LASAFTEEQA | VLYNQRVEEI |
| 250 | 260 | 270 | 280 | 290 | 300 |
| SPNIRYCAYN | IGDQSAINEL | MQMRLRSGGT | EGLLAEKLEA | LITQTRAKQA | ATMSEVEWRG |
| 310 | 320 | 330 | 340 | 350 | 360 |
| RTVPVKIDKV | RIFLLGLADN | EAAIVQAESE | ETKERLFESM | LSECRDAIQV | VREELKPDQK |
| 370 | 380 | 390 | 400 | 410 | 420 |
| QRDYILEGEP | GKVSNLQYLH | SYLTYIKLST | AIKRNENMAK | GLQRALLQQQ | PEDDSKRSPR |
| 430 | 440 | 450 | 460 | 470 | 480 |
| PQDLIRLYDI | ILQNLVELLQ | LPGLEEDKAF | QKEIGLKTLV | FKAYRCFFIA | QSYVLVKKWS |
| 490 | 500 | 510 | 520 | 530 | 540 |
| EALVLYDRVL | KYANEVNSDA | GAFKNSLKDL | PDVQELITQV | RSEKCSLQAA | AILDANDAHQ |
| 550 | 560 | 570 | 580 | 590 | 600 |
| TETSSSQVKD | NKPLVERFET | FCLDPSLVTK | QANLVHFPPG | FQPIPCKPLF | FDLALNHVAF |
| 610 | 620 | ||||
| PPLEDKLEQK | TKSGLTGYIK | GIFGFRS |