Q9SV09

PR
Gene name
At3g51950 (F4F15.60)
Protein name
Zinc finger CCCH domain-containing protein 46
Names
AtC3H46
Species
Arabidopsis thaliana (Mouse-ear cress)
KEGG Pathway
ath:AT3G51950
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

46-116 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q9SV09

Entry ID Method Resolution Chain Position Source
AF-Q9SV09-F1 Predicted AlphaFoldDB

30 variants for Q9SV09

Variant ID(s) Position Change Description Diseaes Association Provenance
tmp_3_19280343_G_A 22 A>V No 1000Genomes
tmp_3_19280124_A_G 95 F>S No 1000Genomes
tmp_3_19280032_A_C 126 S>A No 1000Genomes
ENSVATH02492752 132 G>D No 1000Genomes
ENSVATH12717551 155 S>F No 1000Genomes
tmp_3_19279927_A_C 161 F>V No 1000Genomes
ENSVATH00415322 166 A>D No 1000Genomes
ENSVATH14422119 173 S>G No 1000Genomes
ENSVATH06298089 175 G>V No 1000Genomes
ENSVATH02492751 183 P>Q No 1000Genomes
ENSVATH06298087 185 R>S No 1000Genomes
ENSVATH00415321 213 T>P No 1000Genomes
tmp_3_19279764_C_A 215 G>V No 1000Genomes
tmp_3_19279616_C_T 231 M>I No 1000Genomes
ENSVATH12717550 311 S>N No 1000Genomes
tmp_3_19279199_T_C 341 Y>C No 1000Genomes
tmp_3_19279200_A_T 341 Y>N No 1000Genomes
ENSVATH06298081 343 T>S No 1000Genomes
tmp_3_19279094_G_A 347 T>I No 1000Genomes
ENSVATH02492748 368 G>V No 1000Genomes
ENSVATH06298079 382 F>L No 1000Genomes
tmp_3_19278854_G_A 399 L>F No 1000Genomes
tmp_3_19278779_G_T 424 L>I No 1000Genomes
ENSVATH00415319 430 L>V No 1000Genomes
ENSVATH14422115 438 D>A No 1000Genomes
tmp_3_19278529_A_T 481 F>L No 1000Genomes
ENSVATH14422084 514 S>T No 1000Genomes
ENSVATH02492746 527 M>I No 1000Genomes
ENSVATH00415318 528 L>I No 1000Genomes
ENSVATH06298074 532 G>S No 1000Genomes

No associated diseases with Q9SV09

2 regional properties for Q9SV09

Type Name Position InterPro Accession
domain Pirin, N-terminal domain 22 - 101 IPR003829
domain Pirin, C-terminal domain 154 - 260 IPR008778

Functions

Description
EC Number
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

No GO annotations of cellular component

Name Definition
No GO annotations for cellular component

4 GO annotations of molecular function

Name Definition
DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
metal ion binding Binding to a metal ion.
mRNA binding Binding to messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
nuclease activity Catalysis of the hydrolysis of ester linkages within nucleic acids.

No GO annotations of biological process

Name Definition
No GO annotations for biological process

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MDGYEATRIV LSRIQSLDPE NASKIMGLLL LQDHGEKEMI RLAFGPETLV HSVIVKAKKE
70 80 90 100 110 120
LGLMNCSRSP WSHQDELISP KNNRGSSLNP ASLPFYANGG RSSRDLTNDF ELMDDMNSRS
130 140 150 160 170 180
TDFLGSVHAR SGSCVLDGLG YGGDSDLGFG GVPCSYFARG FCKNGASCRF VHSDGGADLV
190 200 210 220 230 240
GSPSRIELLR SNSVPPRLAH HFMTRSSLPS FSTKGVNLQQ NDVQRAAAAL MIGDELQKLG
250 260 270 280 290 300
RWRPERIDLS AMACPASRQI YLTFPADSRF REEDVSNYFS TFGPVQDVRI PYQQKRMFGF
310 320 330 340 350 360
VTFVYPETVK SILAKGNPHF VCDSRVLVKP YKEKGKVPDK YRTNQTTERE LSPTGLDSSP
370 380 390 400 410 420
RDVLGGRGFY NNTQDVLWRS KFEEEILELQ SRRLMNLQLL DVKKHFQLNS PTNIHSPNPF
430 440 450 460 470 480
SQSLISPRPL SVIKREYDGG EKGKGSSKEG SDDDTMNLPE RLEDSLPDSP FASPAHHLLL
490 500 510 520 530
FADSADNNGS DLWSPSSDND DNSTPSTLSD SFNSFNYQMP RLPAIGMLPG RGGPTCRVGI