Q9SMN1
Gene name |
GAMMACAL2 (At3g48680, T8P19.190) |
Protein name |
Gamma carbonic anhydrase-like 2, mitochondrial |
Names |
AtCAL2, GAMMA CAL2 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT3G48680 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
9 structures for Q9SMN1
28 variants for Q9SMN1
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH00408837 | 2 | A>G | No | 1000Genomes | |
| ENSVATH00408837 | 2 | A>V | No | 1000Genomes | |
| ENSVATH00408838 | 6 | A>V | No | 1000Genomes | |
| ENSVATH02471508 | 8 | I>T | No | 1000Genomes | |
| tmp_3_18035132_C_T | 9 | S>F | No | 1000Genomes | |
| ENSVATH06272901 | 10 | K>T | No | 1000Genomes | |
| ENSVATH12642924 | 12 | S>N | No | 1000Genomes | |
| ENSVATH00408839 | 12 | S>R | No | 1000Genomes | |
| ENSVATH06272902 | 13 | I>V | No | 1000Genomes | |
| ENSVATH12642935 | 14 | T>S | No | 1000Genomes | |
| ENSVATH02471509 | 31 | V>I | No | 1000Genomes | |
| ENSVATH06272905 | 39 | P>L | No | 1000Genomes | |
| ENSVATH06272907 | 41 | P>Q | No | 1000Genomes | |
| tmp_3_18035234_C_T | 43 | S>L | No | 1000Genomes | |
| ENSVATH12642936 | 44 | Q>L | No | 1000Genomes | |
| ENSVATH14402918 | 69 | L>P | No | 1000Genomes | |
| tmp_3_18035314_C_A | 70 | P>T | No | 1000Genomes | |
| tmp_3_18035399_A_G | 98 | N>S | No | 1000Genomes | |
| ENSVATH06272910 | 99 | G>S | No | 1000Genomes | |
| tmp_3_18035455_G_T | 117 | V>F | No | 1000Genomes | |
| tmp_3_18036432_A_G | 144 | T>A | No | 1000Genomes | |
| ENSVATH14402922 | 217 | I>T | No | 1000Genomes | |
| tmp_3_18036666_G_T | 222 | V>F | No | 1000Genomes | |
| tmp_3_18036729_C_A | 243 | L>I | No | 1000Genomes | |
| ENSVATH06272954 | 252 | L>V | No | 1000Genomes | |
| ENSVATH02471541 | 255 | A>S | No | 1000Genomes | |
| tmp_3_18036770_C_G | 256 | I>M | No | 1000Genomes | |
| ENSVATH00408862 | 256 | I>V | No | 1000Genomes |
No associated diseases with Q9SMN1
No regional properties for Q9SMN1
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q9SMN1 | |||
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| mitochondrial membrane | Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope. |
| mitochondrial respiratory chain complex I | A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone. |
| mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
| plant-type vacuole | A closed structure that is completely surrounded by a unit membrane, contains liquid, and retains the same shape regardless of cell cycle phase. An example of this structure is found in Arabidopsis thaliana. |
| respiratory chain complex I | Respiratory chain complex I is an enzyme of the respiratory chain. It consists of several polypeptide chains and is L-shaped, with a horizontal arm lying in the membrane and a vertical arm that projects into the matrix. The electrons of NADH enter the chain at this complex. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| metal ion binding | Binding to a metal ion. |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| photorespiration | A light-dependent catabolic process occurring concomitantly with photosynthesis in plants (especially C3 plants) whereby dioxygen (O2) is consumed and carbon dioxide (CO2) is evolved. The substrate is glycolate formed in large quantities in chloroplasts from 2-phosphoglycolate generated from ribulose 1,5-bisphosphate by the action of ribulose-bisphosphate carboxylase; the glycolate enters the peroxisomes where it is converted by glycolate oxidase to glyoxylate which undergoes transamination to glycine. This then passes into the mitochondria where it is decarboxylated forming one molecule of serine for every two molecules of glycine. This pathway also exists in photosynthetic bacteria. |
| response to abscisic acid | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus. |
| response to salt stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment. |
| vegetative to reproductive phase transition of meristem | The process involved in transforming a meristem that produces vegetative structures, such as leaves, into a meristem that produces reproductive structures, such as a flower or an inflorescence. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9FMV1 | GAMMACAL1 | Gamma carbonic anhydrase-like 1, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MATSLARISK | RSITSAVSSN | LIRRYFAAEA | VAVATTETPK | PKSQVTPSPD | RVKWDYRGQR |
| 70 | 80 | 90 | 100 | 110 | 120 |
| QIIPLGQWLP | KVAVDAYVAP | NVVLAGQVTV | WDGSSVWNGA | VLRGDLNKIT | VGFCSNVQER |
| 130 | 140 | 150 | 160 | 170 | 180 |
| CVVHAAWSSP | TGLPAQTLID | RYVTVGAYSL | LRSCTIEPEC | IIGQHSILME | GSLVETRSIL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| EAGSVLPPGR | RIPSGELWGG | NPARFIRTLT | NEETLEIPKL | AVAINHLSGD | YFSEFLPYST |
| 250 | |||||
| IYLEVEKFKK | SLGIAI |