Q9SIV0
Gene name |
SUR1 (ALF1, HLS3, RTY, RTY1) |
Protein name |
S-alkyl-thiohydroximate lyase SUR1 |
Names |
Protein ABERRANT LATERAL ROOT FORMATION 1, Protein HOOKLESS 3, Protein ROOTY, Protein ROOTY 1, Protein SUPERROOT 1 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT2G20610 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9SIV0
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9SIV0-F1 | Predicted | AlphaFoldDB |
25 variants for Q9SIV0
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_2_8880282_G_A | 6 | P>L | No | 1000Genomes | |
| ENSVATH01853243 | 20 | E>D | No | 1000Genomes | |
| ENSVATH01853242 | 22 | I>V | No | 1000Genomes | |
| ENSVATH01853240 | 26 | R>Q | No | 1000Genomes | |
| ENSVATH13301456 | 38 | S>N | No | 1000Genomes | |
| ENSVATH00240382 | 61 | G>S | No | 1000Genomes | |
| ENSVATH05542737 | 62 | K>N | No | 1000Genomes | |
| ENSVATH05542736 | 74 | G>S | No | 1000Genomes | |
| tmp_2_8880042_A_G | 86 | I>T | No | 1000Genomes | |
| tmp_2_8880029_G_T | 90 | D>E | No | 1000Genomes | |
| tmp_2_8879694_C_T | 117 | V>I | No | 1000Genomes | |
| tmp_2_8879666_G_T | 126 | P>Q | No | 1000Genomes | |
| ENSVATH05542722 | 193 | D>N | No | 1000Genomes | |
| ENSVATH00240379 | 204 | N>K | No | 1000Genomes | |
| ENSVATH05542720 | 228 | K>R | No | 1000Genomes | |
| ENSVATH05542717 | 235 | K>R | No | 1000Genomes | |
| ENSVATH01853233 | 258 | S>P | No | 1000Genomes | |
| tmp_2_8879138_C_G | 260 | G>A | No | 1000Genomes | |
| ENSVATH05542715 | 261 | K>N | No | 1000Genomes | |
| tmp_2_8879031_C_A | 296 | V>F | No | 1000Genomes | |
| tmp_2_8879025_C_T | 298 | E>K | No | 1000Genomes | |
| tmp_2_8879015_T_G | 301 | K>T | No | 1000Genomes | |
| ENSVATH01853232 | 308 | Q>E | No | 1000Genomes | |
| tmp_2_8878456_A_G | 388 | I>T | No | 1000Genomes | |
| tmp_2_8878203_C_T | 446 | E>K | No | 1000Genomes |
No associated diseases with Q9SIV0
1 regional properties for Q9SIV0
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Aminotransferase, class I/classII | 69 - 432 | IPR004839 |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| carbon-sulfur lyase activity | Catalysis of the elimination of hydrogen sulfide or substituted H2S. |
| L-tyrosine:2-oxoglutarate aminotransferase activity | Catalysis of the reaction: L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate. |
| pyridoxal phosphate binding | Binding to pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6. |
| S-alkylthiohydroximate lyase activity | Catalysis of the conversion of a S-alkylthiohydroximate to a thiohydroximate. |
6 GO annotations of biological process
| Name | Definition |
|---|---|
| adventitious root development | The process whose specific outcome is the progression of adventitious root over time, from its formation to the mature structure. Adventitious roots are post-embryonic roots that develop from the plant shoot. |
| defense response to fungus | Reactions triggered in response to the presence of a fungus that act to protect the cell or organism. |
| glucosinolate biosynthetic process | The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae. |
| indoleacetic acid biosynthetic process | The chemical reactions and pathways resulting in the formation of indole-3-acetic acid, a compound which functions as a growth regulator in plants. |
| regulation of cell growth by extracellular stimulus | Any process in which external signals modulate the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time. |
| tyrosine catabolic process | The chemical reactions and pathways resulting in the breakdown of tyrosine, an aromatic amino acid, 2-amino-3-(4-hydroxyphenyl)propanoic acid. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9SK47 | TAT3 | Probable aminotransferase TAT3 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSEEQPHANL | AVPAFKTEKE | PITQTRNGQS | SVWRFGGSDK | AAKASTVTLR | GVIYMLFDNC |
| 70 | 80 | 90 | 100 | 110 | 120 |
| GKDVNKTILP | LGHGDPSVYP | CFRTCIEAED | AVVDVLRSGK | GNSYGPGAGI | LPARRAVADY |
| 130 | 140 | 150 | 160 | 170 | 180 |
| MNRDLPHKLT | PEDIFLTAGC | NQGIEIVFES | LARPNANILL | PRPGFPHYDA | RAAYSGLEVR |
| 190 | 200 | 210 | 220 | 230 | 240 |
| KFDLLPEKEW | EIDLEGIEAI | ADENTVAMVV | INPNNPCGNV | YSHDHLKKVA | ETARKLGIMV |
| 250 | 260 | 270 | 280 | 290 | 300 |
| ISDEVYDRTI | FGDNPFVSMG | KFASIVPVLT | LAGISKGWVV | PGWKIGWIAL | NDPEGVFETT |
| 310 | 320 | 330 | 340 | 350 | 360 |
| KVLQSIKQNL | DVTPDPATII | QAALPAILEK | ADKNFFAKKN | KILKHNVDLV | CDRLKDIPCV |
| 370 | 380 | 390 | 400 | 410 | 420 |
| VCPKKPESCT | YLLTKLELSL | MDNIKDDIDF | CVKLAREENL | VFLPGDALGL | KNWMRITIGV |
| 430 | 440 | 450 | 460 | ||
| EAHMLEDALE | RLKGFCTRHA | KKTETETESL | QALKLSDNNL | EM |