Q9PVQ9
Gene name |
hoxc9 (hoxc9a) |
Protein name |
Homeobox protein Hox-C9 |
Names |
|
Species |
Oryzias latipes (Japanese rice fish) (Japanese killifish) |
KEGG Pathway |
ola:100529157 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9PVQ9
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9PVQ9-F1 | Predicted | AlphaFoldDB |
No variants for Q9PVQ9
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q9PVQ9 | |||||
No associated diseases with Q9PVQ9
5 regional properties for Q9PVQ9
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Homeobox domain | 192 - 256 | IPR001356 |
| domain | Hox9, N-terminal activation domain | 1 - 181 | IPR006711 |
| conserved_site | Homeobox, conserved site | 227 - 250 | IPR017970 |
| domain | Homeobox domain, metazoa | 216 - 227 | IPR020479-1 |
| domain | Homeobox domain, metazoa | 231 - 250 | IPR020479-2 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| DNA-binding transcription factor activity, RNA polymerase II-specific | A DNA-binding transcription factor activity that modulates the transcription of specific gene sets transcribed by RNA polymerase II. |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSTTGPITNY | YVDSLINHES | GDVIAAARFS | APGSHPAGPR | PTSLVPECGD | YPSCSFAPKP |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PVFSSSWAPV | HSQSSVVYHP | YSHQPHLSTD | SRYMRSWLEP | ISGAVPFHGY | PGNGRHYGLK |
| 130 | 140 | 150 | 160 | 170 | 180 |
| PDAFPDHRAG | ECLGTNGRTY | TDYLYCSSTD | MRDKTQQNAP | SPESELLTSG | KHKEEKPELD |
| 190 | 200 | 210 | 220 | 230 | 240 |
| PNNPVANWIH | ARSTRKKRCP | YTKYQTLELE | KEFLFNMYLT | RDRRYEVARV | LNLTERQVKI |
| 250 | 260 | ||||
| WFQNRRMKMK | KMNKEKGDSK | DQ |