Q9PLU1
Gene name |
greA (TC_0004) |
Protein name |
Transcription elongation factor GreA |
Names |
Transcript cleavage factor GreA |
Species |
Chlamydia muridarum (strain MoPn / Nigg) |
KEGG Pathway |
cmu:TC_0004 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9PLU1
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9PLU1-F1 | Predicted | AlphaFoldDB |
No variants for Q9PLU1
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q9PLU1 | |||||
No associated diseases with Q9PLU1
4 regional properties for Q9PLU1
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Transcription elongation factor, GreA/GreB, C-terminal | 643 - 712 | IPR001437 |
| conserved_site | Transcription elongation factor, GreA/GreB, conserved site | 577 - 608 | IPR018151-1 |
| conserved_site | Transcription elongation factor, GreA/GreB, conserved site | 679 - 695 | IPR018151-2 |
| domain | Transcription elongation factor, GreA/GreB, N-terminal | 565 - 634 | IPR022691 |
No GO annotations of cellular component
| Name | Definition |
|---|---|
| No GO annotations for cellular component |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| RNA polymerase binding | Binding to an RNA polymerase molecule or complex. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| regulation of DNA-templated transcription elongation | Any process that modulates the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides catalyzed by a DNA-dependent RNA polymerase. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MDYLEKLQSL | MENHPSDFFS | LWEEYCFNDV | VSGDELIVLL | EKIKSSSIAP | AFGKIAESVI |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PLWEQLPESE | EKDKVLSLVF | DIQTTNSKRL | LELALQQVKK | YEDSPNYKEA | LRIVGLRDGI |
| 130 | 140 | 150 | 160 | 170 | 180 |
| FFTHCLRHFA | LLMHLCEGNF | VFHQGGWGVG | EIMGVSFLQQ | KVLVEFEGVL | TAKDISFETA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| FRMLSPLKKD | HFLARRFGDP | DAFEAFARKD | PVAVIECLLK | DLGPKNAKEI | RNELVGLVIP |
| 250 | 260 | 270 | 280 | 290 | 300 |
| EEDWSRWWQS | AKIKMKKDSH | ILAPTSSKDP | YIFDPKGFSF | ISQLQASLSG | SNDASKKIAS |
| 310 | 320 | 330 | 340 | 350 | 360 |
| CYTFVRDLGS | ELKDEANRQF | VIKELKSLDL | PADSALSIQR | AMLLSEFLGD | KSSELDCENI |
| 370 | 380 | 390 | 400 | 410 | 420 |
| AKLSEDQMFD | IVNHIEILSF | QKSFLSLIHS | CSPAWVSVFT | KILLTTSTSI | LRDQVFKALI |
| 430 | 440 | 450 | 460 | 470 | 480 |
| VDKKARESIL | EKVSAMIEQP | LLYPELFVWL | FLRVVSGEDG | LFSESDRKEI | GRQMLASALE |
| 490 | 500 | 510 | 520 | 530 | 540 |
| FMHKVAGSPQ | KDLGKKLYSF | LVGQRFLAIR | QIIENASIDY | LKEFVLLSSK | CPQFTQGDLG |
| 550 | 560 | 570 | 580 | 590 | 600 |
| VLRSLAEVVQ | PALKRRVAEE | ENILWTTSES | FTRMKAKLQS | LIGKEMVDNA | KEIEDARALG |
| 610 | 620 | 630 | 640 | 650 | 660 |
| DLRENSEYKF | ALERRARLQE | EIRVLSEEIN | RAKILTKDAV | FTNSVGVGCK | VVLEDEQGEE |
| 670 | 680 | 690 | 700 | 710 | |
| DCYTILGPWD | ANPEEKILSL | KSKLAQEMVG | KTVGESVLFQ | GKKHKIKQIS | SIWD |