Q9PAP2

PR
Gene name
rluB (XF_2453)
Protein name
Ribosomal large subunit pseudouridine synthase B
Names
23S rRNA pseudouridine(2605) synthase, rRNA pseudouridylate synthase B, rRNA-uridine isomerase B
Species
Xylella fastidiosa (strain 9a5c)
KEGG Pathway
xfa:XF_2453
EC number
5.4.99.22: Transferring other groups
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

1-60 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q9PAP2

Entry ID Method Resolution Chain Position Source
AF-Q9PAP2-F1 Predicted AlphaFoldDB

No variants for Q9PAP2

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q9PAP2

No associated diseases with Q9PAP2

3 regional properties for Q9PAP2

Type Name Position InterPro Accession
domain RNA-binding S4 domain 27 - 85 IPR002942
domain Pseudouridine synthase, RsuA/RluA-like 90 - 225 IPR006145
conserved_site Pseudouridine synthase, RsuA/RluB/E/F, conserved site 128 - 142 IPR018496

Functions

Description
EC Number 5.4.99.22 Transferring other groups
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

No GO annotations of cellular component

Name Definition
No GO annotations for cellular component

2 GO annotations of molecular function

Name Definition
RNA binding Binding to an RNA molecule or a portion thereof.
rRNA pseudouridine synthase activity Catalysis of the reaction: an rRNA uridine = an rRNA pseudouridine. Conversion of uridine in an rRNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.

1 GO annotations of biological process

Name Definition
enzyme-directed rRNA pseudouridine synthesis The intramolecular conversion of uridine to pseudouridine during ribosome biogenesis where the enzyme specifies the site that becomes pseudouridylated without using a guide RNA.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MSDTPKPPSN TLSLKRETAT EAPKLEERLH KVLAQAGLGS RRALEQRISN GLIKVNGDIA
70 80 90 100 110 120
QLGMSVKSGD KIELDGRSFV ASALTEPARV LIYNKPEGEV TTREDPEGRP TVFETLPVLK
130 140 150 160 170 180
GARWIAIGRL DINTTGLLLL TTDGELANAM MHPSSEIERE YVVRVRSPEG EEHVQDELLE
190 200 210 220 230 240
QLTRGVMLED GTAKFDTIER IGNTDSHDWF RVVVKEGRNR EVRRLWESQG CQVSRLKRTR
250 260 270 280 290 300
YGSVLLPREL LRGQSTELPK TQVEALRTQL KLEKDMPLAL TLQPIIGQRR SAKATLHVNR
310 320 330 340 350 360
NDNNKHAYHN NHSTADESRE LRRFDTLRDD RGRGQGKHHF KDRLTVSGEA AAKQAHKPFK
370 380 390 400 410 420
QYKPKNDRSL SEGSPATFQS WYVPEGVSTG PRNHRNAGAG NGAHPNKKSP NPNTRNTPGQ
430 440 450 460 470
QTRKSPYKYP NNAPNFPSDH ATPTFNPYGN PGQKTGAGRP NNSGGKYNRN RGPRYP