Q9NYU2
Gene name |
UGGT1 |
Protein name |
UDP-glucose:glycoprotein glucosyltransferase 1 |
Names |
UGT1, hUGT1, UDP--Glc:glycoprotein glucosyltransferase, UDP-glucose ceramide glucosyltransferase-like 1 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:56886 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9NYU2
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9NYU2-F1 | Predicted | AlphaFoldDB |
1158 variants for Q9NYU2
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs755207368 CA1865969 |
2 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs866592669 CA55438686 |
4 | K>N | No |
ClinGen Ensembl |
|
|
CA348451660 rs1255389370 |
5 | G>R | No |
ClinGen TOPMed |
|
|
CA348451670 rs1573474532 |
6 | D>G | No |
ClinGen Ensembl |
|
|
CA348451681 rs1385668347 |
8 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA1865971 rs748318163 |
8 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs769978482 CA348451688 |
9 | G>C | No |
ClinGen ExAC gnomAD |
|
|
rs769978482 CA1865972 |
9 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs138106683 CA1865973 |
9 | G>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs528339040 CA55438707 |
10 | A>E | No |
ClinGen gnomAD |
|
|
rs1321313626 CA348451704 |
12 | A>T | No |
ClinGen gnomAD |
|
|
CA1865974 rs749854741 |
14 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1364643102 CA348451716 |
14 | G>S | No |
ClinGen gnomAD |
|
|
CA1865975 rs576164121 |
15 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA55438737 rs1046990722 |
16 | L>Q | No |
ClinGen Ensembl |
|
| TCGA novel | 16 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA348451735 rs1244656802 |
17 | P>L | No |
ClinGen gnomAD |
|
|
CA348451734 rs1244656802 |
17 | P>R | No |
ClinGen gnomAD |
|
|
CA1865977 rs759918733 |
19 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1369172831 CA348452331 |
20 | G>A | No |
ClinGen gnomAD |
|
|
CA55441640 rs140632100 |
26 | G>R | No |
ClinGen ESP |
|
|
CA348452451 rs1480424992 |
27 | V>D | No |
ClinGen gnomAD |
|
|
CA55441655 rs968656783 |
27 | V>L | No |
ClinGen gnomAD |
|
|
CA1866013 rs767389340 |
28 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs142753574 CA55441658 |
28 | L>V | No |
ClinGen ESP |
|
|
rs977374993 CA55441673 |
30 | V>L | No |
ClinGen Ensembl |
|
|
rs1342588558 CA348452479 |
31 | L>F | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 33 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1361456821 CA348452514 |
36 | L>P | No |
ClinGen gnomAD |
|
|
CA1866015 rs146826191 |
36 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1866016 rs764160959 |
37 | F>V | No |
ClinGen ExAC gnomAD |
|
|
rs534212253 CA1866019 |
38 | S>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 39 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1264201118 CA348452539 |
40 | V>A | No |
ClinGen gnomAD |
|
|
rs1189694160 CA348452535 |
40 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1189694160 CA348452536 |
40 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1388726735 CA348452561 |
43 | D>N | No |
ClinGen gnomAD |
|
|
rs75644058 CA55441702 |
44 | S>* | No |
ClinGen Ensembl |
|
|
CA1866023 rs780490701 |
46 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA348452595 rs780490701 |
46 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1348789674 CA348452602 |
46 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs747279717 CA1866024 |
47 | I>V | No |
ClinGen ExAC |
|
|
rs1288828011 CA348452624 |
49 | T>A | No |
ClinGen TOPMed |
|
|
rs915625216 CA55441713 |
49 | T>S | No |
ClinGen Ensembl |
|
|
rs1353377018 CA348452636 |
50 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA348452642 rs1439424995 |
51 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs144422433 CA1866026 |
52 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs144422433 CA1866025 |
52 | T>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA348452693 rs1365390868 |
55 | W>C | No |
ClinGen gnomAD |
|
|
rs1355763408 CA348452686 |
55 | W>L | No |
ClinGen TOPMed |
|
|
rs1299437026 CA348452706 |
57 | S>A | No |
ClinGen gnomAD |
|
|
rs373589457 CA55441718 |
57 | S>F | No |
ClinGen Ensembl |
|
|
rs748928955 CA1866027 |
58 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA55441724 rs918876883 |
60 | L>W | No |
ClinGen TOPMed gnomAD |
|
|
CA348452769 rs1289149695 |
63 | E>G | No |
ClinGen gnomAD |
|
| TCGA novel | 66 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 70 | E>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 71 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1310853472 CA348453193 |
72 | S>N | No |
ClinGen gnomAD |
|
|
CA348453201 rs1207914892 |
73 | Q>K | No |
ClinGen TOPMed gnomAD |
|
|
CA1866057 rs765499364 |
74 | E>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA348453306 rs1309530916 |
81 | E>G | No |
ClinGen TOPMed |
|
|
CA1866058 rs750521553 |
82 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348453325 rs1380378647 |
83 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA348453331 rs1247969978 |
83 | S>R | No |
ClinGen gnomAD |
|
|
rs766470703 CA1866060 |
86 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs993315124 CA55444946 |
86 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA1866061 rs752058222 |
89 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA348453397 rs1171905422 |
90 | D>H | No |
ClinGen gnomAD |
|
|
rs918109556 CA55444957 |
91 | H>D | No |
ClinGen Ensembl |
|
|
rs755482688 CA1866062 |
91 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866063 rs149221713 |
92 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs565045862 CA348453781 |
93 | G>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA1866080 rs565045862 |
93 | G>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1382178259 CA348453428 |
93 | G>S | No |
ClinGen TOPMed |
|
|
rs374148816 CA1866083 |
95 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs374148816 CA1866082 |
95 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1226827107 CA348453844 |
99 | Y>C | No |
ClinGen gnomAD |
|
|
CA348453862 rs1286522355 |
100 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs778094806 CA1866084 |
101 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs1180487391 CA348453869 |
101 | A>V | No |
ClinGen TOPMed |
|
|
CA1866085 rs750089723 |
102 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA348453883 rs535841110 |
103 | L>V | No |
ClinGen gnomAD |
|
|
rs758037247 CA1866086 |
104 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA348453906 rs1358825812 |
105 | A>P | No |
ClinGen gnomAD |
|
|
rs867110210 CA55446876 |
106 | A>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 107 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1866088 rs779459658 |
110 | L>V | No |
ClinGen ExAC |
|
|
CA1866089 rs200256105 |
111 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 112 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1189519368 CA348453992 |
113 | L>P | No |
ClinGen gnomAD |
|
|
rs117125192 CA1866091 |
118 | F>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1368928714 CA348454042 |
118 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA1866092 rs769761390 |
123 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA348454105 rs1392406224 |
124 | L>I | No |
ClinGen gnomAD |
|
|
CA1866093 rs773032464 |
125 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1321544607 CA348454116 |
125 | R>H | No |
ClinGen gnomAD |
|
|
CA55446897 rs945309777 |
128 | S>T | No |
ClinGen TOPMed gnomAD |
|
|
rs749506550 CA1866094 |
130 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA348454172 rs1341553314 |
131 | I>F | No |
ClinGen gnomAD |
|
|
CA1866095 rs377009535 |
132 | Q>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA348454185 rs1240792478 |
132 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1410641609 CA348454202 |
134 | F>L | No |
ClinGen TOPMed |
|
|
rs759541783 CA1866098 |
136 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA1866097 rs759541783 |
136 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs1267167280 CA348454230 |
136 | Q>R | No |
ClinGen gnomAD |
|
|
rs148193364 CA1866120 |
138 | A>G | No |
ClinGen ESP ExAC gnomAD |
|
|
CA1866121 rs762170364 |
140 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs954779065 CA55447729 |
141 | E>D | No |
ClinGen TOPMed |
|
|
CA348454345 rs1172179610 |
143 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA348454344 rs1172179610 |
143 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA1866122 rs765506986 |
144 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA1866123 rs751307512 |
145 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767169917 CA1866125 |
146 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA348454373 rs1298650163 |
147 | C>R | No |
ClinGen gnomAD |
|
|
CA1866126 rs752208940 |
149 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA348454402 rs752208940 |
149 | S>W | No |
ClinGen ExAC gnomAD |
|
|
COSM459644 rs267598867 CA55447769 |
152 | S>L | cervix Variant assessed as Somatic; impact. urinary_tract [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
CA348454447 rs1206313705 |
155 | G>E | No |
ClinGen TOPMed |
|
|
rs749174470 CA1866129 |
156 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 157 | K>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 157 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1242428066 CA348454500 |
162 | D>E | No |
ClinGen TOPMed |
|
|
rs1204405623 CA348454496 |
162 | D>V | No |
ClinGen gnomAD |
|
|
rs778654544 CA1866131 |
168 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA55447794 rs772240188 |
170 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA55447807 rs761079050 |
170 | T>I | No |
ClinGen Ensembl |
|
|
CA1866133 rs772240188 |
170 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348454563 rs1268248674 |
172 | S>A | No |
ClinGen gnomAD |
|
|
CA348454568 rs1357671000 |
172 | S>F | No |
ClinGen gnomAD |
|
|
CA348454578 rs1227603704 |
173 | E>G | No |
ClinGen TOPMed |
|
|
rs1205122802 CA348454583 |
174 | R>G | No |
ClinGen gnomAD |
|
|
CA1866140 rs773673911 |
175 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA55448995 rs928402338 |
175 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA348455164 rs887679203 |
178 | L>F | No |
ClinGen gnomAD |
|
|
CA348455184 rs1175039965 |
180 | F>L | No |
ClinGen TOPMed |
|
|
rs767223317 CA1866142 |
181 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348455207 rs1236963054 |
183 | D>Y | No |
ClinGen TOPMed |
|
|
rs752263906 CA1866143 |
184 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA348455220 rs1293421298 |
184 | H>Y | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 185 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1866144 rs760302863 |
186 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs763494768 CA1866145 |
188 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA348455260 rs1488252585 |
188 | S>T | No |
ClinGen gnomAD |
|
|
CA348455284 rs1450558103 |
190 | N>I | No |
ClinGen gnomAD |
|
|
CA348455297 rs1573512914 |
191 | P>R | No |
ClinGen Ensembl |
|
| TCGA novel | 194 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1481382305 CA348455322 |
194 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA1866149 rs750167946 |
197 | I>F | No |
ClinGen ExAC gnomAD |
|
|
CA348455387 rs1181179801 |
200 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
COSM1528067 CA55449025 rs768872494 |
202 | I>F | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
rs1459519951 CA348455406 |
202 | I>T | No |
ClinGen gnomAD |
|
|
CA1866150 rs758631988 |
209 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs370309601 CA1866151 |
209 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1866153 rs747191845 |
211 | H>N | No |
ClinGen ExAC gnomAD |
|
|
rs200613827 CA55449039 |
211 | H>P | No |
ClinGen Ensembl |
|
|
CA1866152 rs747191845 |
211 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs374345386 CA1866154 |
212 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1866155 rs749193577 COSM3764802 |
212 | R>H | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA1866156 rs770153704 |
216 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866158 rs540119468 |
218 | S>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs771421998 CA1866159 |
219 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs1573513053 CA348455578 |
219 | N>K | No |
ClinGen Ensembl |
|
|
rs775336319 CA1866160 |
219 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA1866161 rs760219651 |
220 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs763696808 CA1866162 |
221 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866164 rs761831326 |
222 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA1866163 rs753245487 |
222 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA348455600 rs1182990749 |
223 | I>S | No |
ClinGen gnomAD |
|
|
CA55449099 rs940014742 |
224 | N>H | No |
ClinGen TOPMed |
|
|
rs4662775 CA348455608 |
224 | N>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1473972226 CA348455622 |
226 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1412164298 CA348455687 |
232 | F>Y | No |
ClinGen gnomAD |
|
|
rs1191836221 CA348455769 |
233 | N>K | No |
ClinGen TOPMed |
|
|
rs1427009235 CA348455774 |
234 | P>S | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 236 | K>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs759206201 CA1866180 |
238 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs146323756 CA1866181 |
239 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs776216392 CA1866182 |
240 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 241 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1866183 rs761159782 |
242 | S>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1309905497 CA348455875 |
244 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1351227296 CA348455882 |
245 | G>S | No |
ClinGen gnomAD |
|
|
CA1866185 rs773190820 |
246 | V>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 247 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1866187 rs766193989 |
247 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA1866186 rs762846484 |
247 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA348455902 rs762846484 |
247 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA348455934 rs1346282887 |
250 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA1866189 rs755243757 |
252 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs559606455 CA348455967 |
253 | T>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA55449846 rs559606455 |
253 | T>S | No |
ClinGen gnomAD |
|
|
rs1284915764 CA348455975 |
254 | E>K | No |
ClinGen TOPMed |
|
|
CA348455998 rs1436790728 |
256 | K>E | No |
ClinGen gnomAD |
|
|
CA55449849 rs377726916 |
257 | A>T | No |
ClinGen ESP TOPMed |
|
|
CA348456034 rs1353224965 |
259 | D>V | No |
ClinGen gnomAD |
|
|
CA348456073 rs1248040527 |
263 | V>M | No |
ClinGen gnomAD |
|
|
CA1866203 rs772670280 |
266 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA1866204 rs762898257 |
266 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866206 rs533795611 |
271 | T>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs759312548 CA1866207 |
273 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA348453499 rs767327674 |
274 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA1866208 rs767327674 |
274 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA348453527 rs1322166821 |
277 | D>G | No |
ClinGen TOPMed |
|
|
rs752906667 CA1866209 |
277 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1437656158 CA348453550 |
279 | I>V | No |
ClinGen gnomAD |
|
| TCGA novel | 280 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1326301526 CA348453607 |
283 | Q>E | No |
ClinGen gnomAD |
|
|
CA1866211 rs764305068 |
284 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs368075843 CA55430695 |
286 | L>V | No |
ClinGen ESP |
|
|
rs1573518202 CA348454268 |
288 | G>R | No |
ClinGen Ensembl |
|
|
CA348454291 rs1390875827 |
291 | R>K | No |
ClinGen TOPMed |
|
|
rs762053199 CA348455655 |
292 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348455635 rs753974200 |
292 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866230 rs753974200 |
292 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348455673 rs1473675554 |
293 | L>P | No |
ClinGen gnomAD |
|
|
CA348455668 rs1255550324 |
293 | L>V | No |
ClinGen gnomAD |
|
|
CA1866233 COSM1006374 rs765347260 |
296 | D>N | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA1866232 rs765347260 |
296 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866235 rs780304167 |
298 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866236 rs751862525 |
300 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs1022847087 CA348455734 |
300 | Q>L | No |
ClinGen TOPMed |
|
|
rs1022847087 CA55433117 |
300 | Q>R | No |
ClinGen TOPMed |
|
|
CA1866237 rs755766836 |
302 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA1866238 rs777466337 |
303 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs748922668 CA1866239 |
304 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1026215962 CA55433133 |
306 | K>E | No |
ClinGen Ensembl |
|
|
rs745827245 CA1866242 |
313 | N>H | No |
ClinGen ExAC gnomAD |
|
|
rs1275258929 CA348455945 |
313 | N>S | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 314 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1866243 rs772000066 |
314 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1278275343 CA348456013 |
316 | A>T | No |
ClinGen gnomAD |
|
|
rs775442369 CA1866244 |
317 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs4662594 CA348456088 |
319 | K>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA55433144 rs1015484091 |
319 | K>Q | No |
ClinGen TOPMed |
|
|
CA348456112 rs1558767089 COSM475892 |
321 | W>* | kidney Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
CA55433161 rs866870244 |
322 | Q>* | No |
ClinGen Ensembl |
|
|
rs762074584 CA1866248 |
322 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA348456130 rs1402947635 |
323 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
rs765273176 CA1866249 |
324 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
rs1354704687 CA348456268 |
326 | L>F | No |
ClinGen TOPMed |
|
|
rs1468366478 CA348456273 |
326 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
CA55433569 rs1023902204 |
327 | S>N | No |
ClinGen TOPMed |
|
|
CA348456328 rs1553435190 |
330 | T>A | No |
ClinGen Ensembl |
|
|
CA1866264 rs768621372 |
330 | T>I | No |
ClinGen ExAC |
|
|
rs776535759 CA1866265 |
332 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348456359 rs1429648486 |
333 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1429648486 CA348456358 |
333 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA1866266 rs376225871 |
333 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 334 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs146936997 CA1866269 |
338 | P>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs766430960 CA1866271 |
338 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA1866270 rs146936997 |
338 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1438370419 CA348456430 |
339 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA1866272 rs189963968 |
345 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA55433620 rs113315394 |
348 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA1866274 rs113315394 |
348 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA1866275 rs767895728 |
349 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1305896309 CA348456532 |
353 | F>S | No |
ClinGen gnomAD |
|
|
CA1866276 rs373438460 |
355 | T>A | No |
ClinGen ESP ExAC gnomAD |
|
|
CA1866277 rs756876597 |
357 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1235680073 CA348456554 |
357 | A>T | No |
ClinGen TOPMed |
|
|
CA1866290 rs771036242 |
359 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA55434892 rs949420083 |
360 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA1866291 rs774370007 |
362 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348456889 rs1259431135 |
363 | T>A | No |
ClinGen gnomAD |
|
|
CA348456891 rs1486954499 |
363 | T>I | No |
ClinGen gnomAD |
|
|
rs760062786 CA1866292 |
364 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs375209686 CA1866294 |
366 | S>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA348456908 rs375209686 |
366 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1408435856 CA348456924 |
367 | S>L | No |
ClinGen gnomAD |
|
|
rs754020698 CA1866295 |
367 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs761171217 CA1866296 |
368 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA348456960 rs1178262102 |
370 | R>I | No |
ClinGen TOPMed |
|
|
CA1866297 rs369942228 |
370 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1006377 CA1866300 rs766018217 |
372 | E>K | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA1866301 rs751055878 |
374 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs781255708 CA1866303 |
375 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1181794835 CA348457044 |
376 | N>S | No |
ClinGen TOPMed |
|
|
CA1866304 rs145904892 |
377 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA348457066 rs1374349738 |
378 | K>Q | No |
ClinGen gnomAD |
|
|
CA348457670 rs1373723110 |
381 | K>R | No |
ClinGen gnomAD |
|
|
rs1029862668 CA55437353 |
383 | T>A | No |
ClinGen TOPMed |
|
|
CA1866321 rs201964193 |
383 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1866322 rs766913373 |
386 | L>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 387 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA348457739 rs1273133341 |
392 | A>S | No |
ClinGen gnomAD |
|
|
CA348457742 rs1343679991 |
392 | A>V | No |
ClinGen gnomAD |
|
|
CA348457744 rs755962693 |
393 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866324 rs755962693 |
393 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866325 rs777642686 |
394 | F>V | No |
ClinGen ExAC gnomAD |
|
|
rs1205741232 CA348457762 |
396 | N>D | No |
ClinGen gnomAD |
|
|
CA1866326 rs116770175 |
397 | G>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA348457780 rs1290979539 |
398 | L>R | No |
ClinGen gnomAD |
|
|
rs142963053 CA1866328 COSM1236184 |
400 | M>I | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA348457791 rs1393143495 |
400 | M>L | No |
ClinGen gnomAD |
|
|
rs1169695070 CA348457800 |
401 | D>G | No |
ClinGen gnomAD |
|
|
rs746080787 CA1866329 |
404 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA55437391 rs771743950 |
406 | D>H | No |
ClinGen Ensembl |
|
|
CA1866331 rs779968924 |
407 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs150369972 CA1866332 |
408 | F>C | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1283399774 CA348457879 |
410 | L>P | No |
ClinGen gnomAD |
|
|
rs1205509257 CA348457877 |
410 | L>V | No |
ClinGen gnomAD |
|
|
rs1205886212 CA348457890 |
412 | D>H | No |
ClinGen TOPMed |
|
|
rs1347249327 CA348457894 |
412 | D>V | No |
ClinGen TOPMed |
|
|
CA55438465 rs925325677 |
414 | L>W | No |
ClinGen Ensembl |
|
|
CA1866358 rs773668068 |
418 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA1866360 rs771562188 |
419 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs745535728 CA1866359 |
419 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs936773806 CA55438481 |
420 | V>L | No |
ClinGen Ensembl |
|
|
CA1866361 rs758027128 |
421 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs892313037 CA55438498 |
425 | H>R | No |
ClinGen Ensembl |
|
|
CA348457985 rs570577436 |
426 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1384824645 CA348457992 |
427 | L>F | No |
ClinGen gnomAD |
|
|
CA348457989 rs1440500931 |
427 | L>W | No |
ClinGen TOPMed |
|
|
rs1337105165 CA348457994 |
428 | G>R | No |
ClinGen TOPMed |
|
|
rs761708516 CA1866365 |
429 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1418454445 CA348458000 |
429 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA348458017 rs1375587012 |
431 | G>A | No |
ClinGen gnomAD |
|
|
CA348458019 rs1413785397 |
432 | L>V | No |
ClinGen gnomAD |
|
|
CA348458026 rs368032461 |
433 | S>A | No |
ClinGen ESP TOPMed |
|
|
CA55438504 rs368032461 |
433 | S>P | No |
ClinGen ESP TOPMed |
|
|
rs1175029014 CA348458031 |
434 | L>V | No |
ClinGen TOPMed |
|
|
CA55438509 rs963980086 |
435 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA348458060 rs1337176855 |
438 | L>W | No |
ClinGen gnomAD |
|
|
CA348458082 rs1239438182 |
441 | N>K | No |
ClinGen gnomAD |
|
|
rs765049843 CA1866366 |
442 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA1866368 rs758661619 |
443 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA1866367 rs750170057 |
443 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1195339470 CA348458098 |
444 | P>S | No |
ClinGen Ensembl |
|
|
rs146104685 CA348458105 |
445 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs146104685 CA1866369 |
445 | S>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA348458114 rs1486075814 |
446 | E>D | No |
ClinGen gnomAD |
|
|
CA348458121 rs1255459249 |
448 | D>N | No |
ClinGen TOPMed |
|
|
rs201917960 CA55438528 |
449 | Y>H | No |
ClinGen gnomAD |
|
|
CA1866371 rs142419745 |
451 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs142419745 CA1866372 |
451 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA348458156 rs1182947020 |
453 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA1866374 rs370770594 |
454 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1866373 rs748692822 |
454 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA55438565 rs762314655 |
455 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
rs778292163 CA1866375 |
457 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778292163 CA55438571 |
457 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1300591389 CA348458183 |
458 | I>N | No |
ClinGen gnomAD |
|
|
rs749545483 CA1866376 |
458 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866393 rs191575347 |
461 | V>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1866392 rs756689869 |
461 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA1866394 rs754360256 |
462 | N>H | No |
ClinGen ExAC gnomAD |
|
|
CA1866396 rs779308626 |
465 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA1866398 rs768251058 |
466 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1468410301 CA348458253 |
467 | D>H | No |
ClinGen gnomAD |
|
|
CA1866400 rs747592117 |
469 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs973336656 CA55440620 |
469 | R>S | No |
ClinGen Ensembl |
|
|
CA1866402 rs773070861 |
470 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs375802885 CA1866401 |
470 | Y>C | No |
ClinGen ESP ExAC gnomAD |
|
|
CA348458282 rs1485620659 |
471 | N>T | No |
ClinGen TOPMed |
|
|
CA1866403 rs183821104 |
472 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 473 | W>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA348458293 rs1393538105 COSM1399322 |
473 | W>R | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs770662573 CA1866404 |
474 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs954268175 CA55440650 |
476 | S>G | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 476 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1866406 rs550777068 |
478 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA348458335 rs1338668194 |
479 | E>K | No |
ClinGen gnomAD |
|
|
CA348458333 rs1338668194 |
479 | E>Q | No |
ClinGen gnomAD |
|
|
CA348458349 rs950615199 |
481 | L>F | No |
ClinGen gnomAD |
|
|
CA55440652 rs950615199 |
481 | L>I | No |
ClinGen gnomAD |
|
|
CA1866407 rs767779055 |
482 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1321560748 CA348458355 |
482 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1321560748 CA348458354 |
482 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA1866408 rs752960901 |
483 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1573547058 CA348458361 |
483 | P>L | No |
ClinGen Ensembl |
|
|
rs752960901 COSM1691035 CA348458358 |
483 | P>S | skin [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1312727501 CA348458380 |
486 | P>L | No |
ClinGen TOPMed |
|
|
CA1866409 rs760898157 |
487 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 488 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs567499166 CA55440659 |
489 | I>T | No |
ClinGen 1000Genomes gnomAD |
|
|
rs371400217 CA55440670 |
490 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371400217 CA1866411 |
490 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1866410 rs764250020 |
490 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA1866413 rs139418908 |
492 | I>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA1866412 rs757746933 |
492 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348458466 rs1297631689 |
499 | M>I | No |
ClinGen gnomAD |
|
|
rs765715909 CA55440694 |
499 | M>T | No |
ClinGen gnomAD |
|
|
CA1866416 rs536028643 |
499 | M>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 500 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs766697168 CA1866438 |
500 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA1866440 rs369281288 |
502 | I>T | No |
ClinGen ESP ExAC gnomAD |
|
|
rs142001352 CA1866439 |
502 | I>V | No |
ClinGen ESP ExAC TOPMed |
|
|
CA1866441 rs777158393 |
503 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs953606149 CA55441402 |
504 | D>E | No |
ClinGen TOPMed |
|
|
CA348458504 rs1241279631 |
504 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA348458501 rs78915985 |
504 | D>N | No |
ClinGen Ensembl |
|
|
rs78915985 CA55441400 |
504 | D>Y | No |
ClinGen Ensembl |
|
|
CA55441404 rs760784770 |
505 | P>L | No |
ClinGen Ensembl |
|
|
CA348458509 rs1310050604 |
505 | P>S | No |
ClinGen gnomAD |
|
|
rs1553437861 CA348458512 |
506 | A>T | No |
ClinGen Ensembl |
|
|
rs1274290951 CA348458519 |
507 | H>D | No |
ClinGen Ensembl |
|
|
rs142418887 CA1866444 |
507 | H>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1866443 rs142418887 |
507 | H>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1866442 rs142418887 |
507 | H>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA348458534 rs1250411266 |
509 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA55441415 rs79030267 |
512 | E>A | No |
ClinGen 1000Genomes |
|
|
CA348458559 rs1176555895 |
513 | L>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1046930070 CA55441420 |
514 | M>L | No |
ClinGen TOPMed |
|
|
rs772035312 CA1866446 |
516 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775389490 CA1866447 |
518 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA1866448 rs747260005 |
519 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs747260005 CA1866449 |
519 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1424624076 CA348458611 |
520 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA1866450 rs776577676 |
521 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs762021673 CA1866451 |
522 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA1866452 rs765220024 |
523 | N>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 524 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 525 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs199990012 CA1866454 |
525 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773747165 CA1866453 |
525 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348458649 rs1454882221 |
526 | P>L | No |
ClinGen TOPMed |
|
|
CA348458656 rs1373791371 |
528 | R>G | No |
ClinGen gnomAD |
|
|
CA348458678 rs1216463232 |
529 | I>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1216463232 CA348458679 |
529 | I>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1021413588 CA55442930 |
529 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs773227351 CA1866471 |
532 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1335166928 CA348458717 |
535 | V>L | No |
ClinGen gnomAD |
|
|
CA1866472 rs763462817 |
536 | N>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 537 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA348458738 rs1287584469 |
538 | S>P | No |
ClinGen gnomAD |
|
|
rs771357149 CA1866473 |
539 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA348458754 rs1218003457 |
540 | D>G | No |
ClinGen gnomAD |
|
|
CA1866474 COSM3836788 rs774831190 |
541 | V>I | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA348458773 rs1558784829 |
543 | G>E | No |
ClinGen Ensembl |
|
|
CA1866476 rs767747530 |
543 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA348458777 rs1420299270 |
544 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA348458797 rs1473297400 |
546 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA1866477 rs753570241 |
547 | A>G | No |
ClinGen ExAC |
|
|
rs1163061357 CA348458803 |
547 | A>S | No |
ClinGen gnomAD |
|
|
CA348458809 rs1389151818 |
548 | G>E | No |
ClinGen gnomAD |
|
|
rs761335158 CA1866478 |
551 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs1298248558 CA348458831 |
552 | L>F | No |
ClinGen gnomAD |
|
|
rs1298248558 CA348458830 |
552 | L>V | No |
ClinGen gnomAD |
|
|
rs764865598 CA1866479 |
553 | R>* | No |
ClinGen ExAC gnomAD |
|
|
CA1866480 rs749898679 |
553 | R>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749898679 CA348458836 |
553 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 554 | A>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1355726473 CA348458845 |
554 | A>V | No |
ClinGen gnomAD |
|
|
CA348458850 rs1243744417 |
555 | Y>C | No |
ClinGen gnomAD |
|
|
CA348458867 rs1300951099 |
557 | Y>C | No |
ClinGen TOPMed |
|
|
rs1282251870 CA348458863 |
557 | Y>H | No |
ClinGen gnomAD |
|
|
CA1866482 rs780207262 |
560 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs1406788782 CA348458896 |
561 | E>D | No |
ClinGen TOPMed |
|
|
CA348458893 rs1467510312 |
561 | E>G | No |
ClinGen TOPMed |
|
|
CA1866483 rs751532142 |
562 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA348458897 rs1487964835 |
562 | V>M | No |
ClinGen gnomAD |
|
|
rs1158118125 CA348458906 |
563 | D>G | No |
ClinGen TOPMed |
|
|
rs1259815209 CA348458911 |
564 | D>Y | No |
ClinGen gnomAD |
|
|
rs1443241747 CA348458922 |
565 | Y>C | No |
ClinGen gnomAD |
|
|
CA1866486 rs780808948 |
566 | H>P | No |
ClinGen ExAC gnomAD |
|
|
rs780808948 CA1866485 |
566 | H>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs148868667 CA1866484 |
566 | H>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1866489 rs749434005 |
569 | Q>E | No |
ClinGen ExAC TOPMed |
|
|
CA1866491 rs774886371 |
573 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA1866490 rs759067675 |
573 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1250900018 CA348458969 |
573 | H>Y | No |
ClinGen gnomAD |
|
|
rs767358312 CA1866502 |
574 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA348458998 rs1374526682 |
575 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs778023292 CA1866505 |
576 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1055282991 CA55445173 |
576 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs749487241 CA1866506 |
578 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1168044986 CA348459023 |
579 | R>K | No |
ClinGen TOPMed |
|
|
CA1866507 rs757364995 |
580 | T>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 581 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs778926620 CA1866508 |
581 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866509 rs142665549 |
582 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1375860780 CA348459038 |
582 | E>K | No |
ClinGen TOPMed |
|
| TCGA novel | 583 | K>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA55445178 rs772405479 |
584 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866510 rs772405479 |
584 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 587 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1866511 rs200271089 |
591 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 592 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1275147349 CA348459118 |
594 | E>K | No |
ClinGen TOPMed |
|
|
rs773049954 CA1866514 |
598 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348459149 rs1374395955 |
598 | P>T | No |
ClinGen gnomAD |
|
|
CA1866517 rs773676304 |
600 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA55445212 rs1041230954 |
602 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
rs759522119 CA1866518 |
602 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA55445213 rs900911470 |
603 | N>I | No |
ClinGen TOPMed |
|
|
CA55445216 rs996662078 |
604 | S>G | No |
ClinGen TOPMed |
|
|
CA1866519 rs767420493 |
604 | S>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA1866520 rs773547430 |
605 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348459208 rs1299339311 |
607 | G>E | No |
ClinGen gnomAD |
|
|
CA1866522 rs755949254 |
611 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA348459236 rs1316378594 |
611 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs551061176 CA1866524 |
612 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1553439445 CA348459238 |
612 | Y>H | No |
ClinGen Ensembl |
|
|
CA1866523 rs551061176 |
612 | Y>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348459246 rs1488456165 |
613 | D>G | No |
ClinGen gnomAD |
|
|
CA1866525 rs757424281 |
613 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs547177342 CA348459250 |
614 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA348459251 rs1263283785 |
614 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs547177342 CA1866527 |
614 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs111377408 CA1866529 |
616 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371831015 CA1866528 |
616 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA55446513 rs1044485374 |
619 | A>T | No |
ClinGen Ensembl |
|
|
CA55446522 rs371963783 |
621 | G>A | No |
ClinGen ESP ExAC gnomAD |
|
|
rs371940965 CA1866544 |
621 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371963783 CA1866545 |
621 | G>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs755878470 CA55446524 |
624 | E>A | No |
ClinGen gnomAD |
|
|
rs142802070 CA55446530 |
624 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1866546 rs758458185 |
624 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA348459336 rs752145530 |
625 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348459341 rs1378985130 |
626 | T>N | No |
ClinGen gnomAD |
|
|
CA348459342 rs1378985130 |
626 | T>S | No |
ClinGen gnomAD |
|
|
rs1355086593 CA348459354 |
628 | V>G | No |
ClinGen gnomAD |
|
|
rs199865186 CA1866550 |
628 | V>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs748590265 CA1866551 |
632 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778475331 CA1866553 |
633 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs770180928 COSM175421 CA1866552 |
633 | V>I | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA348459385 rs1255058874 |
634 | V>A | No |
ClinGen gnomAD |
|
|
CA1866554 rs745498642 |
635 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 636 | F>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA348459395 rs1180297410 |
636 | F>S | No |
ClinGen gnomAD |
|
|
rs571417676 CA1866556 |
637 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA348459416 rs1370514964 |
639 | M>T | No |
ClinGen TOPMed |
|
|
rs1378609200 CA348459422 |
640 | P>A | No |
ClinGen gnomAD |
|
|
rs201562265 CA1866557 |
640 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs201562265 CA348459425 |
640 | P>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs200683999 CA1866559 |
645 | Q>H | No |
ClinGen 1000Genomes ExAC |
|
|
rs765059118 CA1866561 |
647 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs184357323 CA55446587 |
649 | D>N | No |
ClinGen 1000Genomes |
|
|
CA1866562 rs750652418 |
651 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1378268971 CA348459500 |
651 | L>S | No |
ClinGen gnomAD |
|
|
CA348459515 rs559452486 |
653 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA55446592 rs559452486 |
653 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1043231836 CA55446601 |
654 | I>L | No |
ClinGen TOPMed |
|
|
rs1249501239 CA348459526 |
655 | T>R | No |
ClinGen TOPMed |
|
|
CA1866563 rs779976451 |
656 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348459536 rs1219321980 |
657 | H>N | No |
ClinGen gnomAD |
|
|
CA348459589 rs1321327034 |
664 | T>I | No |
ClinGen gnomAD |
|
|
CA1866565 rs117344947 |
665 | F>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1866566 rs755104076 |
665 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs1248388425 CA348459612 |
668 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs781779049 CA1866567 |
669 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs145894335 CA1866568 RCV000881780 |
669 | A>V | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA348459627 rs1363061032 |
670 | V>A | No |
ClinGen gnomAD |
|
|
CA1866570 rs369755767 |
671 | Y>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 671 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA348459639 rs1173256483 |
672 | L>S | No |
ClinGen gnomAD |
|
|
rs764377790 CA1866595 |
673 | G>S | No |
ClinGen ExAC |
|
|
CA1866597 rs555116387 |
674 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs779744417 CA1866598 |
675 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA1866599 rs746641771 |
676 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs901145404 CA55453725 |
676 | P>S | No |
ClinGen Ensembl |
|
|
rs998204745 CA55453744 |
677 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA1866600 rs754526033 |
679 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1383937877 CA348459743 |
685 | I>T | No |
ClinGen gnomAD |
|
|
rs748060708 CA1866602 |
685 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866604 rs370863486 |
686 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs769703540 CA1866603 |
686 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA1866605 rs374171534 |
687 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1866607 rs770823209 |
688 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA348459766 CA348459765 rs1335933088 |
688 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
rs770823209 CA1866606 |
688 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs759792408 CA1866608 |
689 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs144222766 CA1866609 |
690 | N>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1866610 rs775651234 |
691 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs761093935 CA1866611 |
692 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA348459806 rs1286890372 |
695 | I>M | No |
ClinGen gnomAD |
|
|
CA348459811 rs1353238128 |
696 | N>S | No |
ClinGen gnomAD |
|
|
CA1866613 rs754287351 |
698 | R>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 699 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1866614 rs757689907 |
700 | L>W | No |
ClinGen ExAC gnomAD |
|
|
CA55453792 rs866959986 |
701 | T>A | No |
ClinGen Ensembl |
|
|
CA1866615 rs765559372 |
701 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1241792831 CA348459849 |
702 | A>V | No |
ClinGen gnomAD |
|
|
CA1866617 rs754579040 |
703 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866616 rs751248497 |
703 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA1866618 rs151159950 |
704 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1866619 rs747758555 |
706 | Y>D | No |
ClinGen ExAC gnomAD |
|
|
CA1866621 rs755562289 |
708 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA1866620 rs755562289 |
708 | D>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 711 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1866623 rs770880278 |
712 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA1866625 rs746099926 |
713 | N>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1320379231 CA348460210 |
714 | N>S | No |
ClinGen gnomAD |
|
|
CA348460232 rs1219657640 |
715 | F>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA55455882 rs747167609 |
716 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866646 rs747167609 |
716 | F>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1479969839 CA348460260 |
717 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs776528293 CA1866648 |
718 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866647 rs768816350 |
718 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1196747695 CA348460313 |
720 | Y>F | No |
ClinGen gnomAD |
|
|
CA1866649 rs762324189 |
720 | Y>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348460369 rs1460512321 |
724 | T>A | No |
ClinGen gnomAD |
|
|
CA348460402 rs1573585723 |
726 | L>W | No |
ClinGen Ensembl |
|
|
CA1866650 rs770222437 |
728 | S>A | No |
ClinGen ExAC gnomAD |
|
|
rs773693712 CA1866651 |
729 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1185269364 CA348460471 |
731 | K>Q | No |
ClinGen gnomAD |
|
|
rs763354698 CA1866652 |
732 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA1866653 rs766618113 |
734 | A>V | No |
ClinGen ExAC |
|
|
rs752422266 CA1866654 |
735 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs201860527 CA1866655 |
736 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1473109128 CA348460551 |
737 | N>H | No |
ClinGen gnomAD |
|
|
rs753330688 CA1866657 |
737 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA55455994 rs201653731 |
738 | S>N | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs756820886 CA1866658 |
745 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA55456575 rs370129540 |
747 | M>I | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA348460800 rs1214550697 |
747 | M>R | No |
ClinGen gnomAD |
|
|
CA348460828 rs1573587157 |
749 | S>F | No |
ClinGen Ensembl |
|
|
CA348460835 rs1182267296 |
750 | K>* | No |
ClinGen gnomAD |
|
|
rs1255351741 CA348460838 |
750 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA1866683 rs766213839 |
752 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA1866684 rs186864707 |
753 | Y>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs186864707 CA1866685 |
753 | Y>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA55457303 rs77292240 |
754 | D>A | No |
ClinGen Ensembl |
|
|
CA55457304 rs77292240 |
754 | D>G | No |
ClinGen Ensembl |
|
|
CA348461474 rs1440796061 |
755 | D>G | No |
ClinGen gnomAD |
|
|
rs1401705054 CA348461465 |
755 | D>N | No |
ClinGen gnomAD |
|
|
rs1490185682 CA348461496 |
757 | F>S | No |
ClinGen TOPMed |
|
|
rs1025391097 CA55457306 |
758 | I>L | No |
ClinGen gnomAD |
|
|
CA55457315 rs1007983122 |
762 | T>P | No |
ClinGen Ensembl |
|
|
rs1211438853 CA348461612 |
765 | I>T | No |
ClinGen TOPMed |
|
|
CA1866704 rs576008618 |
765 | I>V | No |
ClinGen 1000Genomes ExAC |
|
|
CA348461659 rs1489586107 COSM289501 |
768 | D>G | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs777834246 CA1866707 |
768 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA348461707 rs1200321827 |
771 | S>N | No |
ClinGen gnomAD |
|
|
rs749392490 CA348461717 |
771 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA1866709 rs189939076 |
772 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs779340213 CA1866710 |
774 | G>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 775 | R>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1227027905 CA348461763 |
775 | R>Q | No |
ClinGen TOPMed |
|
|
CA1866711 rs149918050 |
775 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA348461843 rs1316127590 |
780 | D>E | No |
ClinGen TOPMed |
|
|
CA348461832 rs1351053745 |
780 | D>H | No |
ClinGen gnomAD |
|
|
CA1866715 rs769508383 |
782 | I>S | No |
ClinGen ExAC gnomAD |
|
|
rs1436593896 CA348461857 |
782 | I>V | No |
ClinGen gnomAD |
|
|
rs1343284693 CA348461878 |
783 | K>R | No |
ClinGen gnomAD |
|
|
CA348461874 rs1343284693 |
783 | K>T | No |
ClinGen gnomAD |
|
|
rs772997029 CA1866716 |
784 | H>R | No |
ClinGen ExAC |
|
|
CA348461886 rs1401582340 |
784 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA348461897 rs1345454698 |
785 | Q>K | No |
ClinGen TOPMed |
|
|
CA1866738 rs773848984 |
786 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
CA348462011 rs1446740315 |
787 | S>F | No |
ClinGen gnomAD |
|
|
CA348462016 rs1558804987 |
788 | S>N | No |
ClinGen Ensembl |
|
|
rs1239689112 CA348462023 |
789 | N>S | No |
ClinGen gnomAD |
|
|
rs772064248 CA1866740 |
790 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775391815 CA1866741 |
793 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs760510726 CA1866742 |
794 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs762046225 CA1866745 |
795 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA1866744 rs754039938 |
795 | M>V | No |
ClinGen ExAC TOPMed |
|
|
rs1007744467 CA55459417 |
796 | I>F | No |
ClinGen TOPMed gnomAD |
|
|
CA1866746 rs200758318 |
797 | N>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1866747 rs141056898 |
798 | N>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs373502507 CA55459434 |
799 | P>T | No |
ClinGen ESP |
|
|
rs758551928 CA1866748 |
800 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1399179723 COSM4138292 CA348462127 |
804 | S>R | pancreas [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs371279601 CA1866749 |
805 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA55459451 rs62160073 |
806 | E>G | No |
ClinGen Ensembl |
|
|
rs755421274 CA1866751 |
808 | T>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 812 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1866755 rs778426054 |
812 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1462152137 CA348462190 |
814 | I>V | No |
ClinGen gnomAD |
|
|
rs1190764259 CA348462202 |
815 | W>* | No |
ClinGen TOPMed |
|
|
rs745440702 CA1866756 |
816 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1241846310 CA348462209 |
816 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA348462215 rs1458678054 |
817 | A>V | No |
ClinGen gnomAD |
|
|
rs1181955504 CA348462224 |
819 | Q>* | No |
ClinGen gnomAD |
|
|
rs771547096 CA1866757 COSM1006383 |
819 | Q>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1362840902 CA348462225 |
819 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1448390720 CA348462237 |
821 | Q>E | No |
ClinGen TOPMed |
|
|
CA1866758 rs775445126 |
821 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866762 rs138775101 |
824 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1034126829 CA55459526 |
825 | A>V | No |
ClinGen Ensembl |
|
|
CA1866763 rs765565927 |
826 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs773298156 CA1866764 |
829 | F>C | No |
ClinGen ExAC gnomAD |
|
|
rs1009149991 CA55459550 |
829 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA348462294 rs1329673981 |
830 | I>V | No |
ClinGen gnomAD |
|
|
CA348462303 rs1335381988 |
831 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
CA55459565 rs748754019 |
834 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs748754019 CA1866765 |
834 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA1866766 rs375888471 |
835 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs566620033 CA348462337 |
836 | E>A | No |
ClinGen gnomAD |
|
|
CA348462338 CA1866767 rs752131392 |
836 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs566620033 CA55459575 |
836 | E>G | No |
ClinGen gnomAD |
|
|
CA55459570 rs970423094 |
836 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs199903025 CA1866768 |
837 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA1866769 rs199903025 |
837 | G>W | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1249290526 CA348462346 |
838 | A>V | No |
ClinGen gnomAD |
|
|
CA1866770 rs753168753 |
839 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA348462362 rs1428834443 |
841 | A>T | No |
ClinGen TOPMed |
|
|
CA1866771 rs370330020 |
842 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1866772 rs778674147 |
843 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs1479967214 CA348462377 |
844 | A>T | No |
ClinGen gnomAD |
|
|
CA1866773 rs745487772 |
844 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348462382 rs1425653639 |
845 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA55459630 rs143246608 |
846 | A>T | No |
ClinGen ESP |
|
|
CA1866774 rs757935795 |
847 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866775 rs779492594 |
848 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866776 rs141470228 |
849 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs138147083 CA1866777 |
849 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1866779 rs374677691 |
853 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1866780 rs769456605 |
854 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769456605 CA1866781 |
854 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866805 rs200448927 |
856 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 865 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA55460401 rs937241328 |
865 | F>L | No |
ClinGen gnomAD |
|
|
rs1444097406 CA348462539 |
866 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA348462535 rs1259646975 |
866 | E>Q | No |
ClinGen TOPMed |
|
|
rs764532829 CA1866806 |
868 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348462554 rs1288958939 |
869 | K>Q | No |
ClinGen TOPMed |
|
|
CA348462557 rs1413923780 |
869 | K>R | No |
ClinGen TOPMed |
|
|
rs754136980 CA1866807 |
870 | M>L | No |
ClinGen ExAC |
|
|
rs766081153 CA1866809 |
871 | D>A | No |
ClinGen ExAC gnomAD |
|
|
rs572713543 CA1866808 |
871 | D>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA348462587 rs1311218271 |
873 | I>T | No |
ClinGen TOPMed |
|
|
rs754560228 CA1866811 |
874 | L>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 877 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1455120265 CA348462610 |
877 | A>T | No |
ClinGen gnomAD |
|
|
COSM1399325 CA1866814 rs115343101 |
878 | V>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1226982777 CA348462625 |
879 | Y>C | No |
ClinGen gnomAD |
|
|
rs201393910 CA1866817 |
883 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA348462682 rs1475083655 |
887 | K>N | No |
ClinGen TOPMed |
|
|
rs558443567 CA55460506 |
888 | K>M | No |
ClinGen 1000Genomes |
|
|
rs1033039860 CA55460531 |
889 | G>E | No |
ClinGen TOPMed |
|
|
rs1558806393 CA348462704 |
891 | R>K | No |
ClinGen Ensembl |
|
|
rs202199544 CA1866818 |
891 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866819 rs374688922 |
892 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 893 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA348462747 rs1573595165 |
897 | G>E | No |
ClinGen Ensembl |
|
|
rs1460893321 CA348462751 |
898 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1460893321 CA348462753 |
898 | R>M | No |
ClinGen TOPMed gnomAD |
|
|
CA1866838 rs780321001 |
900 | I>M | No |
ClinGen ExAC |
|
|
rs199603289 CA1866837 |
900 | I>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1457752567 CA348462791 |
902 | P>L | No |
ClinGen TOPMed |
|
|
CA55461045 rs1002946848 |
907 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1162481031 CA348462843 |
910 | N>D | No |
ClinGen TOPMed |
|
|
CA1866839 rs747118099 |
913 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA348462883 rs1405301985 |
915 | H>Y | No |
ClinGen gnomAD |
|
|
rs372965661 CA1866840 |
916 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1164236412 CA348462893 |
916 | L>H | No |
ClinGen gnomAD |
|
|
CA55461098 rs958903330 |
917 | L>I | No |
ClinGen TOPMed |
|
|
rs893315145 CA55461113 |
918 | E>G | No |
ClinGen gnomAD |
|
|
CA1866843 COSM1163608 rs113995539 |
918 | E>K | pancreas [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA348462901 rs893315145 |
918 | E>V | No |
ClinGen gnomAD |
|
|
rs546635507 CA1866845 |
920 | I>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA1866844 rs546635507 |
920 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs767130232 CA1866846 |
922 | L>* | No |
ClinGen ExAC gnomAD |
|
|
CA1866847 rs775183280 |
923 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA1866848 rs760300916 |
924 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1188753100 CA348462952 |
926 | G>E | No |
ClinGen gnomAD |
|
|
CA1866850 rs753849099 |
928 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866851 rs757202456 |
931 | S>A | No |
ClinGen ExAC gnomAD |
|
|
CA1866852 rs765129220 |
935 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
CA348463027 rs566517560 |
937 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs566517560 CA1866854 |
937 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
COSM176482 CA1866853 rs750253179 |
937 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs780190717 CA1866855 |
938 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747226307 CA1866857 |
939 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755084690 CA1866858 |
940 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770349388 CA1866861 |
941 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA1866860 rs781204881 |
941 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA1866859 rs781204881 |
941 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA1866862 rs369743558 |
942 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA348463070 rs1558810381 |
943 | A>T | No |
ClinGen Ensembl |
|
|
CA348463079 rs1179235817 |
944 | S>N | No |
ClinGen TOPMed |
|
|
CA1866888 rs184372637 |
944 | S>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1866889 rs150967445 |
945 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA55463680 rs1026935681 |
947 | V>I | No |
ClinGen Ensembl |
|
|
rs1178452218 CA348463106 |
948 | M>R | No |
ClinGen gnomAD |
|
|
rs780846994 CA55463700 |
948 | M>V | No |
ClinGen Ensembl |
|
|
CA1866892 rs762902507 |
952 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs766104555 CA1866893 |
953 | L>P | No |
ClinGen ExAC gnomAD |
|
|
COSM1006386 CA1866895 rs199731155 |
956 | A>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA348463169 rs1573602474 |
958 | P>R | No |
ClinGen Ensembl |
|
|
CA1866897 rs767772350 |
958 | P>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 959 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA348463177 rs1165909097 |
959 | K>N | No |
ClinGen gnomAD |
|
|
rs756175959 CA1866899 |
959 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1439048335 CA348463180 |
960 | G>E | No |
ClinGen gnomAD |
|
|
rs777857745 CA1866900 |
960 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA1866901 rs754313556 |
962 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA348463192 rs1241556027 |
962 | P>S | No |
ClinGen TOPMed |
|
|
rs374117560 CA1866903 |
965 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1866904 rs746293236 |
966 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA1866905 rs772544587 |
968 | F>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA1866906 rs781033546 |
970 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA348463273 rs1402467171 |
973 | H>R | No |
ClinGen TOPMed |
|
|
CA348463271 rs1329749572 |
973 | H>Y | No |
ClinGen gnomAD |
|
| TCGA novel | 974 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs755728721 CA1866925 |
975 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374150825 CA1866926 |
977 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1866928 rs150180993 |
980 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1866929 rs150180993 |
980 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV000906562 rs73955967 CA1866931 CA348463346 |
982 | E>D | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA55467515 rs941282299 |
982 | E>K | No |
ClinGen TOPMed |
|
|
CA1866933 rs760381547 |
983 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866932 rs775197446 |
983 | G>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1193987565 CA348463360 |
985 | T>A | No |
ClinGen gnomAD |
|
|
CA348463380 rs1389561143 |
987 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs143954343 CA1866935 |
989 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs761994977 CA348463409 |
992 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs761994977 CA1866936 |
992 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA1866938 rs750991432 |
993 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866939 rs758921221 |
995 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA55467555 rs867014617 |
998 | R>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1383199710 CA348463451 |
999 | E>G | No |
ClinGen gnomAD |
|
|
CA55467560 rs111733216 |
1001 | Q>R | No |
ClinGen Ensembl |
|
|
rs1320488595 CA348463482 |
1004 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs766859066 CA1866940 |
1005 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs752032250 CA1866941 |
1008 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA348463543 rs759973432 |
1012 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1866960 rs759973432 |
1012 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348463545 rs1205640394 |
1012 | Q>R | No |
ClinGen gnomAD |
|
|
rs1420019423 CA348463574 |
1016 | M>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA348463571 rs1180284546 |
1016 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
rs577516635 CA1866963 |
1016 | M>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA1866964 rs778531945 |
1020 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA55468147 rs147301095 |
1022 | M>L | No |
ClinGen ESP TOPMed |
|
|
CA1866966 rs757882355 |
1025 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs1177793948 CA348463638 |
1025 | Q>R | No |
ClinGen gnomAD |
|
| TCGA novel | 1027 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 1028 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs374565408 CA1866969 |
1029 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs768520091 CA1866970 |
1031 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348463675 rs1573612902 |
1031 | M>V | No |
ClinGen Ensembl |
|
|
rs1347164022 CA348463686 |
1032 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA1866971 rs780794776 |
1032 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA1866972 rs540130141 |
1033 | L>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA348463705 rs1300527204 |
1035 | S>T | No |
ClinGen gnomAD |
|
|
rs1487828964 CA348463725 |
1036 | F>S | No |
ClinGen gnomAD |
|
|
CA1866991 rs376525697 |
1038 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA55469152 rs558066198 |
1038 | R>H | No |
ClinGen gnomAD |
|
|
CA1866993 rs778167690 |
1039 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA55469178 rs982579409 |
1044 | E>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1322720836 CA348463783 |
1045 | I>V | No |
ClinGen gnomAD |
|
|
TCGA novel CA55469180 rs926487334 |
1047 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen Ensembl |
|
rs771051298 CA1866995 |
1051 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1289391886 CA348463830 |
1052 | S>G | No |
ClinGen gnomAD |
|
|
rs1365960922 CA348463850 |
1054 | A>G | No |
ClinGen gnomAD |
|
|
rs578018332 CA55469229 |
1055 | K>E | No |
ClinGen TOPMed |
|
|
rs570408170 CA1866997 |
1056 | G>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1218499495 CA348463876 |
1059 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1186175687 CA348463920 CA348463919 |
1064 | M>I | No |
ClinGen gnomAD |
|
|
CA1867002 rs772881110 |
1064 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs1472962167 CA348463933 |
1066 | Q>H | No |
ClinGen gnomAD |
|
|
rs1244810726 CA348463948 |
1069 | L>V | No |
ClinGen TOPMed |
|
|
rs1411293004 CA348463966 |
1072 | L>M | No |
ClinGen gnomAD |
|
|
rs1558818318 CA348463975 |
1073 | N>S | No |
ClinGen Ensembl |
|
|
CA348463984 rs1316624591 |
1074 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA348463987 rs1402255038 |
1075 | N>D | No |
ClinGen gnomAD |
|
|
rs751086103 CA1867005 |
1078 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754503249 CA1867006 |
1080 | W>R | No |
ClinGen ExAC gnomAD |
|
|
CA1867007 rs767391615 |
1082 | V>E | No |
ClinGen ExAC TOPMed |
|
|
rs139024150 CA1867009 |
1086 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA348464075 rs1427801519 |
1087 | T>I | No |
ClinGen gnomAD |
|
|
rs749537719 CA1867011 |
1089 | Y>D | No |
ClinGen ExAC gnomAD |
|
|
rs939925845 CA55469327 |
1091 | L>I | No |
ClinGen Ensembl |
|
|
rs145961367 CA1867012 |
1093 | N>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1867013 rs779192493 |
1094 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA55469961 rs1005600373 |
1102 | V>A | No |
ClinGen TOPMed |
|
|
RCV001091551 rs1691234655 |
1103 | V>M | No |
ClinVar dbSNP |
|
|
CA1867029 rs757047065 |
1105 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1172121350 CA348464543 |
1106 | E>D | No |
ClinGen gnomAD |
|
|
rs750609631 CA1867031 |
1106 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1016934524 CA55469968 |
1107 | Y>* | No |
ClinGen Ensembl |
|
|
CA1867033 rs780041085 |
1111 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA348464599 rs1573616820 |
1111 | Y>S | No |
ClinGen Ensembl |
|
|
CA1867035 rs769208172 |
1114 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA1867036 rs781660668 |
1116 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1120 | D>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1231874425 CA348464707 |
1120 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA348464723 rs1573616878 |
1121 | I>V | No |
ClinGen Ensembl |
|
|
rs1272643285 CA348464741 |
1122 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA348464734 rs1573616889 |
1122 | T>P | No |
ClinGen Ensembl |
|
|
rs770168579 CA1867038 |
1126 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA1867040 rs146726650 |
1128 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1867039 rs773911386 |
1128 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed |
|
rs1273505917 CA348464812 |
1129 | G>R | No |
ClinGen gnomAD |
|
|
CA348464825 rs1481932591 |
1130 | L>V | No |
ClinGen gnomAD |
|
|
CA348464869 rs1224504833 |
1133 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1193694700 CA348464932 |
1138 | A>G | No |
ClinGen gnomAD |
|
|
CA348464924 rs1451030587 |
1138 | A>T | No |
ClinGen gnomAD |
|
|
rs956990363 CA55470057 |
1139 | N>K | No |
ClinGen Ensembl |
|
|
rs73955974 RCV000906563 CA1867043 |
1139 | N>S | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs73955974 CA348464943 |
1139 | N>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs764168373 CA1867044 |
1140 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA1867047 rs765040837 |
1142 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs150406613 CA55470080 |
1142 | I>V | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs750614392 CA1867048 |
1146 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs758586382 CA1867049 |
1148 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA55470091 rs913021428 |
1148 | M>V | No |
ClinGen Ensembl |
|
|
rs113962947 CA55470115 |
1149 | A>T | No |
ClinGen Ensembl |
|
| TCGA novel | 1152 | G>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1463616121 CA348465222 |
1153 | Y>* | No |
ClinGen gnomAD |
|
|
CA348465226 rs1365994288 |
1154 | F>L | No |
ClinGen TOPMed |
|
|
rs753161743 CA1867075 |
1155 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA348465298 rs1423571970 |
1159 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA1867078 rs566613773 |
1160 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
COSM1399329 CA1867077 rs778140274 |
1160 | P>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs757676561 CA1867079 |
1163 | W>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA55470875 rs912678810 |
1164 | I>F | No |
ClinGen Ensembl |
|
|
CA55470880 rs866349519 |
1167 | L>I | No |
ClinGen gnomAD |
|
|
rs1212539156 CA348465420 |
1169 | K>E | No |
ClinGen TOPMed |
|
|
CA1867081 rs746621914 |
1171 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs928801898 CA55470889 |
1171 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA1867082 rs768284682 |
1179 | Y>D | No |
ClinGen ExAC gnomAD |
|
|
CA348465539 rs768284682 |
1179 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs918545543 CA55472400 |
1182 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA1867093 rs554215972 |
1182 | D>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA348466059 rs1558822437 |
1183 | G>S | No |
ClinGen Ensembl |
|
|
CA55472402 rs994857168 COSM1399330 |
1185 | D>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
CA55472404 rs1051587138 |
1187 | P>T | No |
ClinGen TOPMed |
|
|
rs754349227 CA1867096 |
1188 | P>A | No |
ClinGen ExAC TOPMed |
|
|
rs147951041 RCV000879963 CA1867097 |
1188 | P>L | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA348466144 rs1558822503 |
1191 | D>N | No |
ClinGen Ensembl |
|
|
rs779355045 CA1867098 |
1192 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs562996363 CA1867102 |
1196 | V>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1867101 rs780702614 |
1196 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1867105 rs749181032 |
1198 | N>S | No |
ClinGen ExAC |
|
|
rs141634374 CA1867106 |
1202 | S>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs999775570 CA55472464 |
1203 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1491004261 CA348466331 |
1205 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1192292560 CA348466336 |
1206 | K>E | No |
ClinGen gnomAD |
|
|
rs1348105250 CA348466552 |
1210 | Q>* | No |
ClinGen gnomAD |
|
|
rs1322723717 CA348466592 |
1215 | M>T | No |
ClinGen gnomAD |
|
|
CA1867120 rs755677543 COSM3406850 |
1216 | V>M | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs770925883 CA1867123 |
1218 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1867122 rs748785961 |
1218 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA1867124 rs778793653 |
1220 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs369961504 CA1867125 |
1221 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1867127 rs775815440 |
1222 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA348466649 rs1203184293 |
1224 | G>R | No |
ClinGen TOPMed |
|
|
CA55472955 rs903766911 |
1225 | T>M | No |
ClinGen gnomAD |
|
|
rs1213160937 CA348466677 |
1228 | N>D | No |
ClinGen gnomAD |
|
|
CA348466688 rs1238882617 |
1229 | E>A | No |
ClinGen gnomAD |
|
|
rs768795908 CA1867129 |
1229 | E>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1232 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA348466720 rs1181127271 |
1234 | D>H | No |
ClinGen gnomAD |
|
|
rs73955981 CA1867130 RCV000906564 |
1237 | K>R | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA55473454 rs182639951 |
1239 | G>C | No |
ClinGen 1000Genomes gnomAD |
|
|
rs766776057 CA1867158 |
1239 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA55473462 rs542584787 |
1241 | T>A | No |
ClinGen 1000Genomes gnomAD |
|
|
CA1867159 rs774648638 |
1241 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA348466789 rs1172957218 |
1242 | G>E | No |
ClinGen TOPMed |
|
|
rs1404156493 CA348466786 |
1242 | G>R | No |
ClinGen TOPMed |
|
|
CA348466796 rs1200925692 |
1243 | Q>R | No |
ClinGen gnomAD |
|
|
rs1558824174 CA348466834 |
1248 | V>A | No |
ClinGen Ensembl |
|
|
CA1867160 rs759918322 |
1251 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA1867161 rs763787325 |
1252 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1393554235 CA348466869 |
1253 | D>G | No |
ClinGen gnomAD |
|
|
rs753443375 CA1867162 |
1253 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1867163 rs756793050 |
1255 | I>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1257 | N>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1558824218 CA348466907 |
1258 | I>S | No |
ClinGen Ensembl |
|
|
rs758327010 CA348466924 |
1261 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1867166 rs758327010 |
1261 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1558824241 CA348466944 |
1264 | G>D | No |
ClinGen Ensembl |
|
|
rs1439576234 CA348466968 |
1268 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA348466980 rs1300781589 |
1269 | R>I | No |
ClinGen gnomAD |
|
|
CA348466982 rs1366994111 |
1269 | R>S | No |
ClinGen gnomAD |
|
|
CA348466988 rs1228684664 |
1270 | F>C | No |
ClinGen gnomAD |
|
| TCGA novel | 1271 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA55473514 rs912349151 |
1272 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs754796580 COSM3379764 CA1867169 |
1272 | R>H | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA1867185 rs749967477 |
1273 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1573627320 CA348467527 |
1274 | M>T | No |
ClinGen Ensembl |
|
| TCGA novel | 1277 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs184244900 CA1867188 |
1278 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs748392363 CA1867191 |
1279 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs114284257 CA1867192 |
1283 | K>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA348467658 rs1302639078 |
1285 | P>L | No |
ClinGen TOPMed |
|
|
CA348467663 rs1390147539 |
1286 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA348467723 rs1382401499 |
1290 | F>L | No |
ClinGen gnomAD |
|
|
rs1042349908 CA55474289 |
1290 | F>S | No |
ClinGen Ensembl |
|
|
CA348467729 rs1164584873 |
1291 | L>S | No |
ClinGen TOPMed |
|
|
CA348467798 rs1354595986 |
1297 | P>A | No |
ClinGen gnomAD |
|
| TCGA novel | 1303 | I>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1867210 rs767546136 |
1304 | P>S | No |
ClinGen ExAC |
|
|
rs752603361 CA1867211 |
1305 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
rs755954861 CA1867213 |
1306 | M>L | No |
ClinGen ExAC gnomAD |
|
|
CA1867212 rs755954861 |
1306 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs754055547 CA1867214 |
1307 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs757289368 CA1867215 |
1308 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs947818220 CA55474734 |
1309 | E>K | No |
ClinGen TOPMed |
|
|
CA1867216 rs778993172 |
1310 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs745936960 CA1867217 |
1311 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs745936960 CA348468057 |
1311 | N>H | No |
ClinGen ExAC gnomAD |
|
|
CA1867218 rs374536872 |
1311 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA55474739 rs1048777217 |
1313 | Q>H | No |
ClinGen TOPMed |
|
|
CA348468130 rs1573628981 |
1317 | V>I | No |
ClinGen Ensembl |
|
|
rs1423207886 CA348468144 |
1318 | Q>* | No |
ClinGen TOPMed |
|
|
CA1867220 rs747421699 |
1320 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348468201 rs1394155253 |
1322 | P>T | No |
ClinGen gnomAD |
|
|
CA1867223 rs772770875 |
1323 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA348468217 rs772770875 |
1323 | R>P | No |
ClinGen ExAC gnomAD |
|
|
COSM1006391 rs772770875 CA1867222 |
1323 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs367781664 CA1867221 |
1323 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA348468227 rs1370948278 |
1324 | W>* | No |
ClinGen gnomAD |
|
|
rs940562475 CA55474747 |
1326 | H>Y | No |
ClinGen TOPMed |
|
|
CA1867224 rs770357879 |
1327 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs1388644960 CA348468320 |
1331 | K>E | No |
ClinGen gnomAD |
|
|
CA1867227 rs759109996 |
1332 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs752635911 CA1867228 |
1333 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348468353 rs1232374637 |
1333 | R>H | No |
ClinGen gnomAD |
|
|
CA1867230 rs553145526 |
1335 | I>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA1867229 rs553145526 |
1335 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs371618884 CA1867232 |
1339 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA348468434 rs1489164249 |
1340 | I>L | No |
ClinGen gnomAD |
|
|
CA348468490 rs1251989522 |
1344 | D>E | No |
ClinGen gnomAD |
|
| TCGA novel | 1347 | F>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA55474804 rs374352200 COSM212117 |
1352 | D>E | breast [Cosmic] | No |
ClinGen cosmic curated ESP TOPMed gnomAD |
|
rs750543596 CA1867234 |
1353 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs990854990 CA55474819 |
1355 | L>V | No |
ClinGen gnomAD |
|
|
rs1036595844 CA55474826 |
1357 | V>A | No |
ClinGen TOPMed |
|
|
CA348468646 rs1326583352 |
1358 | D>G | No |
ClinGen gnomAD |
|
|
CA348468640 rs1459504440 |
1358 | D>N | No |
ClinGen gnomAD |
|
| TCGA novel | 1361 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA348453557 rs201255980 |
1364 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs201255980 CA1867257 |
1364 | R>Q | Variant assessed as Somatic; 4.626e-05 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA348453579 rs1253719997 |
1366 | D>G | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 1367 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA55436037 rs200663779 |
1368 | K>R | No |
ClinGen 1000Genomes |
|
|
rs755563373 CA1867258 |
1370 | L>* | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1372 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781543892 CA1867259 |
1373 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs147911417 CA1867260 |
1374 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200649180 CA1867261 |
1376 | D>A | No |
ClinGen ExAC gnomAD |
|
|
CA55436062 rs200649180 |
1376 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA55436054 rs992790640 |
1376 | D>N | No |
ClinGen TOPMed |
|
|
CA1867263 rs745450606 |
1377 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1474260278 CA348453688 |
1378 | A>G | No |
ClinGen gnomAD |
|
| TCGA novel | 1378 | A>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1867265 rs775198790 |
1379 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs776412281 CA55436109 |
1383 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348453720 rs1361224442 |
1383 | T>I | No |
ClinGen gnomAD |
|
|
CA348453717 rs776412281 |
1383 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1867268 rs776412281 |
1383 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1415832273 CA348453746 |
1387 | D>A | No |
ClinGen gnomAD |
|
|
rs931463975 CA55436129 |
1388 | S>N | No |
ClinGen TOPMed |
|
|
CA348453754 rs931463975 |
1388 | S>T | No |
ClinGen TOPMed |
|
|
CA1867269 rs762550912 |
1389 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348453758 rs762550912 |
1389 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1867270 rs764969270 |
1389 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1867271 rs773427976 |
1390 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA1867272 rs763103011 |
1391 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1224243648 CA348453790 |
1392 | M>K | No |
ClinGen Ensembl |
|
|
rs1224243648 CA348453792 |
1392 | M>T | No |
ClinGen Ensembl |
|
|
CA348453837 rs1558828163 |
1394 | G>A | No |
ClinGen Ensembl |
|
|
CA348453854 rs1221676450 |
1395 | Y>C | No |
ClinGen gnomAD |
|
|
rs1573631334 CA348453886 |
1397 | F>V | No |
ClinGen Ensembl |
|
|
CA1867276 rs375800908 |
1401 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA348453983 rs1255316861 |
1402 | Y>D | No |
ClinGen gnomAD |
|
| TCGA novel | 1403 | W>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1173797962 CA348454024 |
1404 | A>T | No |
ClinGen TOPMed |
|
|
rs778229022 CA1867279 |
1409 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1202476229 CA348454147 |
1410 | R>* | No |
ClinGen Ensembl |
|
|
CA1867280 rs754242647 |
1412 | Y>D | No |
ClinGen ExAC gnomAD |
|
|
CA1867281 rs758191913 |
1413 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs929842732 CA55437142 |
1418 | Y>C | No |
ClinGen TOPMed |
|
|
rs747643183 CA1867304 |
1420 | V>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1421 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs756366154 CA55437157 |
1428 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1269512989 CA348455110 |
1430 | A>G | No |
ClinGen gnomAD |
|
| TCGA novel | 1430 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1047105612 CA55437163 |
1431 | G>S | No |
ClinGen TOPMed |
|
|
rs769785409 CA1867305 |
1433 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs891107433 CA55437191 |
1435 | R>G | No |
ClinGen TOPMed |
|
|
CA1867308 rs749127961 |
1439 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA55437192 rs750550835 |
1440 | G>C | No |
ClinGen Ensembl |
|
| TCGA novel | 1442 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs770661976 CA1867309 |
1442 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA55437201 rs868764139 |
1443 | Q>K | No |
ClinGen Ensembl |
|
| TCGA novel | 1445 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs759622830 CA1867311 |
1445 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs772328929 CA1867312 |
1447 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA55437209 rs978884534 |
1447 | S>N | No |
ClinGen Ensembl |
|
|
CA348455440 rs1264440209 |
1448 | L>F | No |
ClinGen gnomAD |
|
|
rs1429685216 CA348455474 |
1450 | N>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1460506690 CA348455493 |
1451 | L>I | Variant assessed as Somatic; 4.621e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
| TCGA novel | 1453 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA55438727 rs997699742 |
1457 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA348456611 rs1354665235 |
1459 | M>V | No |
ClinGen gnomAD |
|
|
rs1243052020 CA348456623 |
1460 | I>S | No |
ClinGen TOPMed |
|
|
rs753495793 TCGA novel CA55438728 |
1461 | H>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen Ensembl |
|
CA1867335 rs747110436 |
1461 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA1867338 rs762351628 |
1465 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA348456668 rs1260318636 |
1467 | S>A | No |
ClinGen gnomAD |
|
|
rs765760622 CA1867339 |
1470 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
rs773515276 CA1867340 |
1477 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1485666047 CA348456765 |
1480 | D>G | No |
ClinGen gnomAD |
|
|
CA1867342 rs767121760 |
1482 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1003831077 CA55438755 |
1483 | S>A | No |
ClinGen gnomAD |
|
|
CA348456788 rs1033598472 |
1484 | K>E | No |
ClinGen gnomAD |
|
|
rs1033598472 CA55438756 |
1484 | K>Q | No |
ClinGen gnomAD |
|
|
rs752294353 CA1867343 |
1486 | R>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
COSM1269689 rs755650412 CA1867344 |
1487 | A>S | oesophagus [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1436358758 CA348456815 |
1488 | K>E | No |
ClinGen gnomAD |
|
|
rs1558833102 CA348456822 |
1489 | T>P | No |
ClinGen Ensembl |
|
|
CA55439015 rs915202347 |
1493 | C>R | No |
ClinGen Ensembl |
|
|
CA348456925 rs1255657274 |
1493 | C>Y | No |
ClinGen gnomAD |
|
|
CA348456976 rs1269875891 |
1496 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1269875891 CA348456974 |
1496 | P>R | No |
ClinGen TOPMed |
|
|
CA348457022 rs1213960425 |
1500 | E>K | No |
ClinGen gnomAD |
|
|
rs1486439797 CA348457040 |
1501 | P>L | No |
ClinGen gnomAD |
|
|
rs761363700 CA1867364 |
1501 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1419952622 CA348457088 |
1505 | A>T | No |
ClinGen gnomAD |
|
|
rs1254449881 CA348457096 |
1506 | A>T | No |
ClinGen gnomAD |
|
|
CA348457105 rs1205878605 |
1507 | V>A | No |
ClinGen TOPMed |
|
|
rs750336555 CA1867366 |
1507 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs903457488 CA55439034 |
1508 | R>Q | No |
ClinGen TOPMed |
|
|
CA1867367 rs758134900 |
1508 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA1867368 rs779935269 |
1511 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1573640655 CA348457131 |
1512 | E>A | No |
ClinGen Ensembl |
|
|
CA348457142 rs1463035351 |
1513 | W>C | No |
ClinGen gnomAD |
|
|
rs145860116 CA348457146 |
1514 | Q>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs145860116 CA348457145 |
1514 | Q>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1867369 rs145860116 |
1514 | Q>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1867370 rs755317056 |
1515 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA348457155 rs755317056 |
1515 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA348457162 rs1291058324 |
1516 | Y>C | No |
ClinGen gnomAD |
|
|
rs565417201 CA1867371 |
1516 | Y>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1276811495 CA348457172 |
1517 | D>E | No |
ClinGen gnomAD |
|
|
CA1867373 rs530864078 |
1517 | D>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA1867374 rs778170956 |
1518 | Q>* | No |
ClinGen ExAC |
|
|
CA1867375 rs550761984 |
1521 | K>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs939206369 CA55439068 |
1523 | L>V | No |
ClinGen Ensembl |
|
|
rs759864507 CA1867378 |
1526 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs759864507 CA348457232 |
1526 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1867379 rs201486802 |
1526 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1867380 rs201486802 |
1526 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs759864507 CA348457231 |
1526 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348457239 rs1558833961 |
1527 | F>S | No |
ClinGen Ensembl |
|
|
CA1867381 rs200412844 |
1529 | K>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA348457260 rs1191447460 |
1530 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA1867382 rs764740269 |
1531 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA1867383 rs750339160 |
1533 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1867384 rs750339160 |
1533 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1535 | A>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA348457290 rs1403861536 |
1535 | A>T | No |
ClinGen gnomAD |
|
|
rs1453432767 CA348457300 |
1536 | L>P | No |
ClinGen gnomAD |
|
|
rs1261816408 CA348457306 |
1537 | Y>C | No |
ClinGen TOPMed |
|
|
CA55439096 rs978811820 |
1541 | T>K | No |
ClinGen Ensembl |
|
|
rs777968974 CA1867392 |
1542 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA1867393 rs749325752 |
1544 | P>Q | No |
ClinGen ExAC gnomAD |
|
|
CA348457355 rs1376308792 |
1544 | P>S | No |
ClinGen gnomAD |
|
|
CA348457361 rs1284461889 |
1545 | S>N | No |
ClinGen gnomAD |
|
|
rs1316137268 CA348457365 |
1545 | S>R | No |
ClinGen gnomAD |
|
|
CA348457367 rs1214095888 |
1546 | R>* | No |
ClinGen gnomAD |
|
|
CA1867394 rs141066610 |
1546 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1867395 rs200062024 |
1547 | E>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA1867397 rs772390615 |
1548 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA348457561 rs1558835972 |
1548 | G>V | No |
ClinGen Ensembl |
|
|
rs1439375504 CA348457579 |
1549 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA1867413 rs576989451 |
1551 | K>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
COSM1231667 CA55439966 rs1001527546 |
1552 | R>C | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA1867414 rs754000327 |
1552 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1555 | L>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs760548439 CA55439971 |
1556 | L>S | No |
ClinGen Ensembl |
No associated diseases with Q9NYU2
5 regional properties for Q9NYU2
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Glucosyltransferase 24, catalytic domain | 1256 - 1523 | IPR040497 |
| domain | UDP-glucose:glycoprotein glucosyltransferase, thioredoxin-like domain 4 | 727 - 955 | IPR040525 |
| domain | UGGT, thioredoxin-like domain 3 | 451 - 699 | IPR040692 |
| domain | UGGT, thioredoxin-like domain 1 | 57 - 234 | IPR040693 |
| domain | UGGT, thioredoxin-like domain 2 | 312 - 440 | IPR040694 |
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). |
| endoplasmic reticulum lumen | The volume enclosed by the membranes of the endoplasmic reticulum. |
| endoplasmic reticulum quality control compartment | A subcompartment of the endoplasmic reticulum in which proteins with improper or incorrect folding accumulate. Enzymes in this compartment direct proteins with major folding problems to translocation to the cytosol and degradation, and proteins with minor folding problems to the ER, to interact with chaperon proteins. |
| endoplasmic reticulum-Golgi intermediate compartment | A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi and Golgi-to-ER transport. |
| extracellular exosome | A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
| protein-containing complex | A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| UDP-glucose:glycoprotein glucosyltransferase activity | Catalysis of the addition of UDP-glucose on to asparagine-linked (N-linked) oligosaccharides of the form Man7-9GlcNAc2 on incorrectly folded glycoproteins. |
| unfolded protein binding | Binding to an unfolded protein. |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| 'de novo' post-translational protein folding | The process of assisting in the correct noncovalent folding of newly formed polypeptides or folding intermediates of polypeptides that have exited the ribosome and/or have been stabilized and transferred by other chaperone proteins. This process could involve several cycles of ATP hydrolysis. |
| endoplasmic reticulum mannose trimming | Any protein alpha-1,2-demannosylation that takes place in the endoplasmic reticulum quality control compartment (ERQC). |
| ER-associated misfolded protein catabolic process | The chemical reactions and pathways resulting in the breakdown of misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation. |
| protein N-linked glycosylation via asparagine | The glycosylation of protein via the N4 atom of peptidyl-asparagine forming N4-glycosyl-L-asparagine; the most common form is N-acetylglucosaminyl asparagine; N-acetylgalactosaminyl asparagine and N4 glucosyl asparagine also occur. This modification typically occurs in extracellular peptides with an N-X-(ST) motif. Partial modification has been observed to occur with cysteine, rather than serine or threonine, in the third position; secondary structure features are important, and proline in the second or fourth positions inhibits modification. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9NYU1 | UGGT2 | UDP-glucose:glycoprotein glucosyltransferase 2 | Homo sapiens (Human) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MGCKGDASGA | CAAGALPVTG | VCYKMGVLVV | LTVLWLFSSV | KADSKAITTS | LTTKWFSTPL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| LLEASEFLAE | DSQEKFWNFV | EASQNIGSSD | HDGTDYSYYH | AILEAAFQFL | SPLQQNLFKF |
| 130 | 140 | 150 | 160 | 170 | 180 |
| CLSLRSYSAT | IQAFQQIAAD | EPPPEGCNSF | FSVHGKKTCE | SDTLEALLLT | ASERPKPLLF |
| 190 | 200 | 210 | 220 | 230 | 240 |
| KGDHRYPSSN | PESPVVIFYS | EIGSEEFSNF | HRQLISKSNA | GKINYVFRHY | IFNPRKEPVY |
| 250 | 260 | 270 | 280 | 290 | 300 |
| LSGYGVELAI | KSTEYKAKDD | TQVKGTEVNT | TVIGENDPID | EVQGFLFGKL | RDLHPDLEGQ |
| 310 | 320 | 330 | 340 | 350 | 360 |
| LKELRKHLVE | STNEMAPLKV | WQLQDLSFQT | AARILASPVE | LALVVMKDLS | QNFPTKARAI |
| 370 | 380 | 390 | 400 | 410 | 420 |
| TKTAVSSELR | TEVEENQKYF | KGTLGLQPGD | SALFINGLHM | DLDTQDIFSL | FDVLRNEARV |
| 430 | 440 | 450 | 460 | 470 | 480 |
| MEGLHRLGIE | GLSLHNVLKL | NIQPSEADYA | VDIRSPAISW | VNNLEVDSRY | NSWPSSLQEL |
| 490 | 500 | 510 | 520 | 530 | 540 |
| LRPTFPGVIR | QIRKNLHNMV | FIVDPAHETT | AELMNTAEMF | LSNHIPLRIG | FIFVVNDSED |
| 550 | 560 | 570 | 580 | 590 | 600 |
| VDGMQDAGVA | VLRAYNYVAQ | EVDDYHAFQT | LTHIYNKVRT | GEKVKVEHVV | SVLEKKYPYV |
| 610 | 620 | 630 | 640 | 650 | 660 |
| EVNSILGIDS | AYDRNRKEAR | GYYEQTGVGP | LPVVLFNGMP | FEREQLDPDE | LETITMHKIL |
| 670 | 680 | 690 | 700 | 710 | 720 |
| ETTTFFQRAV | YLGELPHDQD | VVEYIMNQPN | VVPRINSRIL | TAERDYLDLT | ASNNFFVDDY |
| 730 | 740 | 750 | 760 | 770 | 780 |
| ARFTILDSQG | KTAAVANSMN | YLTKKGMSSK | EIYDDSFIRP | VTFWIVGDFD | SPSGRQLLYD |
| 790 | 800 | 810 | 820 | 830 | 840 |
| AIKHQKSSNN | VRISMINNPA | KEISYENTQI | SRAIWAALQT | QTSNAAKNFI | TKMAKEGAAE |
| 850 | 860 | 870 | 880 | 890 | 900 |
| ALAAGADIAE | FSVGGMDFSL | FKEVFESSKM | DFILSHAVYC | RDVLKLKKGQ | RAVISNGRII |
| 910 | 920 | 930 | 940 | 950 | 960 |
| GPLEDSELFN | QDDFHLLENI | ILKTSGQKIK | SHIQQLRVEE | DVASDLVMKV | DALLSAQPKG |
| 970 | 980 | 990 | 1000 | 1010 | 1020 |
| DPRIEYQFFE | DRHSAIKLRP | KEGETYFDVV | AVVDPVTREA | QRLAPLLLVL | AQLINMNLRV |
| 1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
| FMNCQSKLSD | MPLKSFYRYV | LEPEISFTSD | NSFAKGPIAK | FLDMPQSPLF | TLNLNTPESW |
| 1090 | 1100 | 1110 | 1120 | 1130 | 1140 |
| MVESVRTPYD | LDNIYLEEVD | SVVAAEYELE | YLLLEGHCYD | ITTGQPPRGL | QFTLGTSANP |
| 1150 | 1160 | 1170 | 1180 | 1190 | 1200 |
| VIVDTIVMAN | LGYFQLKANP | GAWILRLRKG | RSEDIYRIYS | HDGTDSPPDA | DEVVIVLNNF |
| 1210 | 1220 | 1230 | 1240 | 1250 | 1260 |
| KSKIIKVKVQ | KKADMVNEDL | LSDGTSENES | GFWDSFKWGF | TGQKTEEVKQ | DKDDIINIFS |
| 1270 | 1280 | 1290 | 1300 | 1310 | 1320 |
| VASGHLYERF | LRIMMLSVLK | NTKTPVKFWF | LKNYLSPTFK | EFIPYMANEY | NFQYELVQYK |
| 1330 | 1340 | 1350 | 1360 | 1370 | 1380 |
| WPRWLHQQTE | KQRIIWGYKI | LFLDVLFPLV | VDKFLFVDAD | QIVRTDLKEL | RDFNLDGAPY |
| 1390 | 1400 | 1410 | 1420 | 1430 | 1440 |
| GYTPFCDSRR | EMDGYRFWKS | GYWASHLAGR | KYHISALYVV | DLKKFRKIAA | GDRLRGQYQG |
| 1450 | 1460 | 1470 | 1480 | 1490 | 1500 |
| LSQDPNSLSN | LDQDLPNNMI | HQVPIKSLPQ | EWLWCETWCD | DASKKRAKTI | DLCNNPMTKE |
| 1510 | 1520 | 1530 | 1540 | 1550 | |
| PKLEAAVRIV | PEWQDYDQEI | KQLQIRFQKE | KETGALYKEK | TKEPSREGPQ | KREEL |