Q9LTX4
Gene name |
At5g49960 (K9P8.10) |
Protein name |
Probable ion channel POLLUX |
Names |
AtPOLLUX, Probable ion channel DMI1 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT5G49960 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9LTX4
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9LTX4-F1 | Predicted | AlphaFoldDB |
40 variants for Q9LTX4
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH12674725 | 22 | S>T | No | 1000Genomes | |
| ENSVATH12674694 | 23 | Y>N | No | 1000Genomes | |
| ENSVATH14620368 | 41 | T>I | No | 1000Genomes | |
| ENSVATH12674693 | 46 | G>C | No | 1000Genomes | |
| tmp_5_20327527_G_C | 54 | T>R | No | 1000Genomes | |
| tmp_5_20327504_G_T | 62 | P>T | No | 1000Genomes | |
| ENSVATH03402192 | 68 | Q>R | No | 1000Genomes | |
| ENSVATH07386281 | 83 | L>F | No | 1000Genomes | |
| tmp_5_20327434_T_C | 85 | H>R | No | 1000Genomes | |
| ENSVATH00723734 | 100 | F>Y | No | 1000Genomes | |
| ENSVATH00723732 | 143 | I>V | No | 1000Genomes | |
| tmp_5_20327075_A_T | 147 | L>I | No | 1000Genomes | |
| tmp_5_20327045_C_T | 157 | D>N | No | 1000Genomes | |
| ENSVATH03402189 | 158 | L>I | No | 1000Genomes | |
| ENSVATH07386273 | 164 | L>I | No | 1000Genomes | |
| tmp_5_20326906_G_T | 203 | A>E | No | 1000Genomes | |
| tmp_5_20326877_A_C | 213 | L>V | No | 1000Genomes | |
| ENSVATH07386270 | 261 | L>W | No | 1000Genomes | |
| ENSVATH12674692 | 344 | L>V | No | 1000Genomes | |
| tmp_5_20326393_G_A | 348 | S>L | No | 1000Genomes | |
| tmp_5_20326246_C_T | 372 | A>T | No | 1000Genomes | |
| ENSVATH12674690 | 377 | G>R | No | 1000Genomes | |
| tmp_5_20325986_T_C | 430 | T>A | No | 1000Genomes | |
| ENSVATH00723723 | 528 | A>T | No | 1000Genomes | |
| ENSVATH03402181 | 543 | M>I | No | 1000Genomes | |
| ENSVATH07386253 | 590 | R>T | No | 1000Genomes | |
| ENSVATH12674667 | 592 | K>R | No | 1000Genomes | |
| tmp_5_20325181_T_A | 593 | K>M | No | 1000Genomes | |
| tmp_5_20325166_C_T | 598 | G>E | No | 1000Genomes | |
| tmp_5_20324963_A_C | 635 | I>S | No | 1000Genomes | |
| tmp_5_20324961_G_A | 636 | L>F | No | 1000Genomes | |
| tmp_5_20324713_G_C | 672 | A>G | No | 1000Genomes | |
| ENSVATH00723708 | 672 | A>S | No | 1000Genomes | |
| ENSVATH00723707 | 676 | A>V | No | 1000Genomes | |
| ENSVATH12674613 | 774 | Y>H | No | 1000Genomes | |
| ENSVATH07386249 | 775 | D>N | No | 1000Genomes | |
| ENSVATH00723701 | 786 | I>V | No | 1000Genomes | |
| ENSVATH07386248 | 803 | T>I | No | 1000Genomes | |
| ENSVATH12674611 | 808 | L>V | No | 1000Genomes | |
| tmp_5_20324206_A_T | 814 | D>E | No | 1000Genomes |
No associated diseases with Q9LTX4
7 regional properties for Q9LTX4
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | DNA topoisomerase, type IA, domain 2 | 146 - 242 | IPR003601 |
| domain | DNA topoisomerase, type IA, DNA-binding domain | 289 - 545 | IPR003602 |
| domain | TOPRIM domain | 3 - 155 | IPR006171 |
| domain | DNA topoisomerase, type IA, central | 112 - 125 | IPR013497-1 |
| domain | DNA topoisomerase, type IA, central | 170 - 593 | IPR013497-2 |
| active_site | DNA topoisomerase, type IA, active site | 326 - 340 | IPR023406 |
| domain | DNA topoisomerase 3-like, TOPRIM domain | 3 - 167 | IPR034144 |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| nuclear membrane | Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| ion transport | The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MPIHTPRRTS | LFQRSKTLPT | NSYRRFTSPV | IPTFRYDDGD | TVSYDGDDSS | NLPTVPNPEE |
| 70 | 80 | 90 | 100 | 110 | 120 |
| KPVPVPSQSP | SQRITRLWTQ | FSLTHCLKFI | CSCSFTYVMF | LRSKVSRLEA | ENIILLTRCN |
| 130 | 140 | 150 | 160 | 170 | 180 |
| SSSDNNEMEE | TNSRAVVFFS | VIITFVLPFL | LYMYLDDLSH | VKNLLRRTNQ | KKEDVPLKKR |
| 190 | 200 | 210 | 220 | 230 | 240 |
| LAYSLDVCFS | VYPYAKLLAL | LLATVVLIVY | GGLALYAVSD | CGVDEALWLS | WTFVADSGSH |
| 250 | 260 | 270 | 280 | 290 | 300 |
| ADRVGVGARI | VSVAISAGGM | LIFATMLGLI | SDAISKMVDS | LRKGKSEVLE | SNHILILGWS |
| 310 | 320 | 330 | 340 | 350 | 360 |
| DKLGSLLKQL | AIANKSIGGG | VVVVLAERDK | EEMETDIAKF | EFDLMGTSVI | CRSGSPLILA |
| 370 | 380 | 390 | 400 | 410 | 420 |
| DLKKVSVSNA | RAIIVLGSDE | NADQSDARAL | RVVLSLTGVK | EGWKGHVVVE | MCDLDNEPLV |
| 430 | 440 | 450 | 460 | 470 | 480 |
| KLVGGERIET | VVAHDVIGRL | MIQCALQPGL | AQIWEDILGF | ENAEFYIKKW | PQLDGYCFED |
| 490 | 500 | 510 | 520 | 530 | 540 |
| VLISFPNAIP | CGVKVAADGK | IVLNPSDDYV | LKEGDEILVI | AEDDDTYAPG | SLPEVRMCHF |
| 550 | 560 | 570 | 580 | 590 | 600 |
| PKMQDPPKYP | EKILFCGWRR | DIDDMIKVLE | ALLAPGSELW | MFNEVPDQER | EKKLTDAGLN |
| 610 | 620 | 630 | 640 | 650 | 660 |
| ISKLVNIKLV | HRQGNAVIRR | HLESLPLETF | DSILILAEQS | LENSIVHSDS | RSLATLLLIR |
| 670 | 680 | 690 | 700 | 710 | 720 |
| DIQSKRLPYK | DAKSSALRIS | GFPNCCWIRK | MQQASDKSIV | ISEILDSRTK | NLVSVSRISD |
| 730 | 740 | 750 | 760 | 770 | 780 |
| YVLSNELVSM | ALAMVAEDKQ | INRVLKELFA | EKGNELCIRP | AEFYIYDQEE | VCFYDIMRRA |
| 790 | 800 | 810 | 820 | ||
| RQRQEIIIGY | RLAGMEQAVI | NPTDKSKLTK | WSLDDVFVVI | ASSQ |