Q9LS28
Gene name |
GTE12 (At5g46550, F10E10.2) |
Protein name |
Transcription factor GTE12 |
Names |
Bromodomain-containing protein GTE12, Protein GLOBAL TRANSCRIPTION FACTOR GROUP E12 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT5G46550 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9LS28
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9LS28-F1 | Predicted | AlphaFoldDB |
60 variants for Q9LS28
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH07354922 | 18 | R>S | No | 1000Genomes | |
| ENSVATH07354921 | 21 | Q>L | No | 1000Genomes | |
| tmp_5_18886437_A_T | 23 | L>M | No | 1000Genomes | |
| tmp_5_18886403_A_C | 34 | V>G | No | 1000Genomes | |
| tmp_5_18886391_A_G | 38 | L>S | No | 1000Genomes | |
| ENSVATH07354920 | 43 | E>K | No | 1000Genomes | |
| ENSVATH07354920 | 43 | E>Q | No | 1000Genomes | |
| ENSVATH03374713 | 48 | R>G | No | 1000Genomes | |
| ENSVATH12583689 | 53 | E>A | No | 1000Genomes | |
| ENSVATH12583688 | 54 | L>V | No | 1000Genomes | |
| tmp_5_18886340_T_C | 55 | D>G | No | 1000Genomes | |
| ENSVATH14601378 | 92 | P>S | No | 1000Genomes | |
| ENSVATH07354918 | 94 | D>H | No | 1000Genomes | |
| ENSVATH12583687 | 98 | M>L | No | 1000Genomes | |
| ENSVATH14601377 | 102 | D>N | No | 1000Genomes | |
| ENSVATH07354916 | 105 | N>D | No | 1000Genomes | |
| ENSVATH07354916 | 105 | N>H | No | 1000Genomes | |
| ENSVATH07354914 | 124 | V>F | No | 1000Genomes | |
| tmp_5_18886118_T_C | 129 | D>G | No | 1000Genomes | |
| ENSVATH12583685 | 177 | R>K | No | 1000Genomes | |
| ENSVATH14601376 | 182 | E>K | No | 1000Genomes | |
| ENSVATH12583664 | 187 | Y>C | No | 1000Genomes | |
| ENSVATH00715273 | 189 | R>G | No | 1000Genomes | |
| tmp_5_18885916_A_C | 196 | C>W | No | 1000Genomes | |
| tmp_5_18885908_C_T | 199 | R>Q | No | 1000Genomes | |
| ENSVATH03374711 | 201 | S>I | No | 1000Genomes | |
| ENSVATH03374711 | 201 | S>T | No | 1000Genomes | |
| tmp_5_18885879_C_T | 209 | G>R | No | 1000Genomes | |
| ENSVATH03374710 | 210 | V>M | No | 1000Genomes | |
| ENSVATH03374709 | 213 | T>K | No | 1000Genomes | |
| ENSVATH07354912 | 232 | V>M | No | 1000Genomes | |
| tmp_5_18885779_G_A | 242 | T>M | No | 1000Genomes | |
| ENSVATH12583662 | 245 | A>T | No | 1000Genomes | |
| tmp_5_18885767_A_G | 246 | L>S | No | 1000Genomes | |
| ENSVATH03374708 | 254 | I>V | No | 1000Genomes | |
| ENSVATH00715271 | 267 | S>T | No | 1000Genomes | |
| tmp_5_18885699_C_T | 269 | V>I | No | 1000Genomes | |
| tmp_5_18885689_A_G | 272 | L>S | No | 1000Genomes | |
| tmp_5_18885686_G_T | 273 | T>K | No | 1000Genomes | |
| tmp_5_18885552_G_C | 285 | A>G | No | 1000Genomes | |
| tmp_5_18885417_G_A | 297 | T>I | No | 1000Genomes | |
| ENSVATH12583658 | 304 | G>V | No | 1000Genomes | |
| ENSVATH12583657 | 310 | L>H | No | 1000Genomes | |
| ENSVATH12583657 | 310 | L>P | No | 1000Genomes | |
| ENSVATH12583656 | 311 | D>E | No | 1000Genomes | |
| ENSVATH03374705 | 316 | S>G | No | 1000Genomes | |
| tmp_5_18885349_C_T | 320 | G>S | No | 1000Genomes | |
| ENSVATH14601354 | 325 | T>S | No | 1000Genomes | |
| ENSVATH00715269 | 331 | P>Q | No | 1000Genomes | |
| tmp_5_18885211_G_C | 332 | P>R | No | 1000Genomes | |
| ENSVATH07354904 | 394 | M>I | No | 1000Genomes | |
| ENSVATH00715267 | 418 | L>I | No | 1000Genomes | |
| tmp_5_18884651_T_G | 425 | K>Q | No | 1000Genomes | |
| tmp_5_18884633_G_A | 431 | R>W | No | 1000Genomes | |
| ENSVATH14601350 | 439 | K>E | No | 1000Genomes | |
| tmp_5_18884587_C_T | 446 | G>D | No | 1000Genomes | |
| ENSVATH14601349 | 447 | C>Y | No | 1000Genomes | |
| ENSVATH00715266 | 450 | L>R | No | 1000Genomes | |
| tmp_5_18884487_T_A | 479 | K>N | No | 1000Genomes | |
| ENSVATH00715265 | 480 | F>I | No | 1000Genomes |
No associated diseases with Q9LS28
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q7Y214 | GTE7 | Transcription factor GTE7 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MVAIPNIKIK | FGPQGSVRTF | QTLSDSSKKI | EHVVTEDLSQ | SSEKSKKRGG | PKELDEVQPK |
| 70 | 80 | 90 | 100 | 110 | 120 |
| KKQRLDCDWS | SQCLALLRFL | MEHRGGWLFK | EPVDPVKMEI | PDYFNVIQKP | MDLGTVKSKL |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LKNVYSNADE | FAADVRLTFA | NAMHYNPLWN | EVHTIAKEIN | EIFEVRWESL | MKKKVLRLSW |
| 190 | 200 | 210 | 220 | 230 | 240 |
| NEVREGYKRQ | PVERDCSRRS | STGTSASSGV | GLTKPAKENS | EKGSLSSKPV | KVQSKKNTPA |
| 250 | 260 | 270 | 280 | 290 | 300 |
| VTPKALATCK | CGRIICICLK | SCSSFGSDVC | SLTDCQLKNI | SGAQASELDP | QSNGSDTSKK |
| 310 | 320 | 330 | 340 | 350 | 360 |
| ERNGSLKSQL | DKPSNSDLLG | NELKTAFPAL | PPVPPEKALR | AAILKAQYAG | TIIKAKHRIV |
| 370 | 380 | 390 | 400 | 410 | 420 |
| LGQNNKADLI | RIQIEKEQME | RAQREEKARI | EAEMRAAKVA | ERMRAQDELK | QKRESQRLEI |
| 430 | 440 | 450 | 460 | 470 | 480 |
| AKMKKGFDFE | RNNHSKLKKK | FVKVCGCFSL | TKARLLLEEL | GLVLKNDYCP | ELEVIGSEKF |
| 490 | |||||
| DAMRMDDLEE | GEIL |