Q9LPZ1
Gene name |
MORF9 |
Protein name |
Multiple organellar RNA editing factor 9, chloroplastic |
Names |
RNA editing-interacting protein 9 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT1G11430 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
5 structures for Q9LPZ1
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 5GI0 | X-ray | 204 A | A | 75-196 | PDB |
| 5IWB | X-ray | 176 A | A | 75-196 | PDB |
| 5IWW | X-ray | 265 A | A/B/C | 75-196 | PDB |
| 5MPY | X-ray | 225 A | A/B | 86-186 | PDB |
| AF-Q9LPZ1-F1 | Predicted | AlphaFoldDB |
8 variants for Q9LPZ1
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH01035645 | 21 | S>R | No | 1000Genomes | |
| ENSVATH00017841 | 44 | N>S | No | 1000Genomes | |
| ENSVATH13879913 | 55 | A>G | No | 1000Genomes | |
| tmp_1_3847450_G_A | 60 | A>T | No | 1000Genomes | |
| tmp_1_3847453_A_G | 61 | T>A | No | 1000Genomes | |
| ENSVATH01035649 | 72 | N>S | No | 1000Genomes | |
| ENSVATH13879914 | 219 | Q>* | No | 1000Genomes | |
| ENSVATH01035689 | 233 | S>E | No | 1000Genomes |
No associated diseases with Q9LPZ1
No regional properties for Q9LPZ1
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q9LPZ1 | |||
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| chloroplast | A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. |
| chloroplast envelope | The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space. |
| chloroplast stroma | The space enclosed by the double membrane of a chloroplast but excluding the thylakoid space. It contains DNA, ribosomes and some temporary products of photosynthesis. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| mRNA binding | Binding to messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns. |
| protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
| protein homodimerization activity | Binding to an identical protein to form a homodimer. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| chloroplast RNA modification | Any RNA modification that takes place in chloroplast. |
| cytidine to uridine editing | The conversion of a cytosine residue to uridine in an RNA molecule by deamination. |
| mRNA processing | Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MASFTTTSSS | SLLLKTLLPV | SHLNRFSTLS | GIRVGDSWTP | LLRNISTAGS | RRRVAIVKAA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| TVDSDYSSKR | SNSNEQRETI | MLPGCDYNHW | LIVMEFPKDP | APSRDQMIDT | YLNTLATVLG |
| 130 | 140 | 150 | 160 | 170 | 180 |
| SMEEAKKNMY | AFSTTTYTGF | QCTIDEETSE | KFKGLPGVLW | VLPDSYIDVK | NKDYGGDKYI |
| 190 | 200 | 210 | 220 | 230 | |
| NGEIIPCTYP | TYQPKQRNNT | KYQSKRYERK | RDGPPPPEQR | KPRQEPAASD | SS |