Q9LM90
Gene name |
At1g20600 (F2D10.9, F5M15.7) |
Protein name |
B3 domain-containing protein At1g20600 |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT1G20600 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9LM90
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9LM90-F1 | Predicted | AlphaFoldDB |
26 variants for Q9LM90
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH01077093 | 2 | A>S | No | 1000Genomes | |
| tmp_1_7133153_G_A | 15 | D>N | No | 1000Genomes | |
| tmp_1_7133166_C_T | 19 | T>I | No | 1000Genomes | |
| ENSVATH04610077 | 28 | D>A | No | 1000Genomes | |
| tmp_1_7133205_G_A | 32 | R>H | No | 1000Genomes | |
| tmp_1_7133222_G_T | 38 | D>Y | No | 1000Genomes | |
| tmp_1_7133262_T_A | 51 | L>* | No | 1000Genomes | |
| tmp_1_7133359_G_A | 83 | M>I | No | 1000Genomes | |
| tmp_1_7133415_A_T | 102 | Y>F | No | 1000Genomes | |
| tmp_1_7133420_G_A | 104 | A>T | No | 1000Genomes | |
| tmp_1_7133480_C_T | 124 | P>S | No | 1000Genomes | |
| ENSVATH11635716 | 128 | Q>* | No | 1000Genomes | |
| ENSVATH11635717 | 144 | S>P | No | 1000Genomes | |
| tmp_1_7133546_G_A | 146 | E>K | No | 1000Genomes | |
| ENSVATH11635718 | 158 | E>K | No | 1000Genomes | |
| ENSVATH11635719 | 169 | S>L | No | 1000Genomes | |
| ENSVATH11635719 | 169 | S>W | No | 1000Genomes | |
| tmp_1_7133622_A_G | 171 | Y>C | No | 1000Genomes | |
| tmp_1_7133634_G_A | 175 | G>E | No | 1000Genomes | |
| tmp_1_7133642_C_T | 178 | Q>* | No | 1000Genomes | |
| tmp_1_7133679_C_T | 190 | T>I | No | 1000Genomes | |
| ENSVATH11635721 | 192 | V>F | No | 1000Genomes | |
| tmp_1_7133693_T_G | 195 | S>A | No | 1000Genomes | |
| tmp_1_7133741_G_C | 211 | D>H | No | 1000Genomes | |
| ENSVATH11635761 | 220 | Q>H | No | 1000Genomes | |
| ENSVATH13933299 | 223 | H>Q | No | 1000Genomes |
No associated diseases with Q9LM90
1 regional properties for Q9LM90
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | B3 DNA binding domain | 125 - 230 | IPR003340 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MANSTGKPTS | STQEDEEVTY | ILAQLMQDVM | DREEDIDDED | DIDDEVASLP | LLLVSQANQK |
| 70 | 80 | 90 | 100 | 110 | 120 |
| QSRKREEKTE | KNQPKRVKNQ | NIMKINIHDF | SEETLRLIED | WYNAELDPQD | IFGDDEVTRR |
| 130 | 140 | 150 | 160 | 170 | 180 |
| FSRPIKKQLM | SSDVDTDQSR | LMLSKEQVKE | KMLPFLEESE | DPVKGVDVSV | YGPDGEVQQM |
| 190 | 200 | 210 | 220 | 230 | |
| KFKMWNGDKT | PVLTSGWMQF | VADYGLLKTS | DFVTDGKVSQ | LEHVFIRGSK | VRCCNTS |