Q9LM50
Gene name |
EMB2204 (At1g22090, F2E2.16) |
Protein name |
UPF0725 protein EMB2204 |
Names |
Protein EMBRYO DEFECTIVE 2204 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT1G22090 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9LM50
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9LM50-F1 | Predicted | AlphaFoldDB |
53 variants for Q9LM50
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_1_7795728_G_C | 3 | R>P | No | 1000Genomes | |
| ENSVATH04620842 | 14 | R>T | No | 1000Genomes | |
| tmp_1_7795770_C_T | 17 | S>F | No | 1000Genomes | |
| ENSVATH04620847 | 25 | G>V | No | 1000Genomes | |
| ENSVATH04620848 | 27 | P>Q | No | 1000Genomes | |
| tmp_1_7795928_A_T | 34 | R>W | No | 1000Genomes | |
| ENSVATH00036816 | 43 | S>N | No | 1000Genomes | |
| ENSVATH11764808 | 56 | Y>D | No | 1000Genomes | |
| tmp_1_7796012_C_A | 62 | H>N | No | 1000Genomes | |
| tmp_1_7796020_C_A | 64 | Y>* | No | 1000Genomes | |
| ENSVATH00036817 | 66 | V>L | No | 1000Genomes | |
| ENSVATH11764809 | 67 | L>F | No | 1000Genomes | |
| ENSVATH11764812 | 74 | L>H | No | 1000Genomes | |
| tmp_1_7796157_C_G | 77 | L>V | No | 1000Genomes | |
| tmp_1_7796170_A_T | 81 | N>I | No | 1000Genomes | |
| ENSVATH13942415 | 98 | R>C | No | 1000Genomes | |
| tmp_1_7796272_A_G | 115 | E>G | No | 1000Genomes | |
| tmp_1_7796294_G_A | 122 | M>I | No | 1000Genomes | |
| ENSVATH00036819 | 122 | M>V | No | 1000Genomes | |
| tmp_1_7796310_A_T | 128 | R>* | No | 1000Genomes | |
| ENSVATH11765105 | 130 | R>Q | No | 1000Genomes | |
| ENSVATH04620855 | 135 | V>G | No | 1000Genomes | |
| ENSVATH11765107 | 136 | P>H | No | 1000Genomes | |
| ENSVATH00036823 | 137 | F>Y | No | 1000Genomes | |
| ENSVATH04620856 | 147 | D>V | No | 1000Genomes | |
| tmp_1_7796464_C_A | 150 | D>E | No | 1000Genomes | |
| ENSVATH04620857 | 151 | N>S | No | 1000Genomes | |
| ENSVATH11765108 | 152 | D>G | No | 1000Genomes | |
| ENSVATH11765114 | 193 | A>V | No | 1000Genomes | |
| tmp_1_7796762_T_A | 200 | V>D | No | 1000Genomes | |
| ENSVATH11765226 | 205 | Q>H | No | 1000Genomes | |
| tmp_1_7796876_A_T | 205 | Q>L | No | 1000Genomes | |
| tmp_1_7796903_A_T | 214 | E>V | No | 1000Genomes | |
| tmp_1_7796909_T_G | 216 | V>G | No | 1000Genomes | |
| ENSVATH04620862 | 219 | P>L | No | 1000Genomes | |
| tmp_1_7796936_C_A | 225 | T>N | No | 1000Genomes | |
| tmp_1_7796944_A_G | 228 | T>A | No | 1000Genomes | |
| ENSVATH04620863 | 228 | T>I | No | 1000Genomes | |
| tmp_1_7796948_T_A | 229 | F>Y | No | 1000Genomes | |
| tmp_1_7796960_C_T | 233 | T>I | No | 1000Genomes | |
| ENSVATH00036829 | 239 | K>T | No | 1000Genomes | |
| ENSVATH00036831 | 254 | K>R | No | 1000Genomes | |
| tmp_1_7797036_G_T | 258 | E>D | No | 1000Genomes | |
| ENSVATH00036832 | 265 | L>I | No | 1000Genomes | |
| tmp_1_7797058_C_T | 266 | R>W | No | 1000Genomes | |
| ENSVATH01085799 | 275 | S>R | No | 1000Genomes | |
| ENSVATH04620865 | 278 | T>I | No | 1000Genomes | |
| ENSVATH04620866 | 293 | R>L | No | 1000Genomes | |
| ENSVATH09372948 | 306 | V>I | No | 1000Genomes | |
| ENSVATH00036837 | 308 | V>A | No | 1000Genomes | |
| tmp_1_7797203_G_A | 314 | W>* | No | 1000Genomes | |
| ENSVATH01085800 | 315 | W>* | No | 1000Genomes | |
| ENSVATH04620868 | 325 | R>C | No | 1000Genomes |
No associated diseases with Q9LM50
No regional properties for Q9LM50
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q9LM50 | |||
No GO annotations of cellular component
| Name | Definition |
|---|---|
| No GO annotations for cellular component |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
3 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9C6N2 | At1g27860 | UPF0725 protein At1g27860 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SRX1 | At1g02770 | UPF0725 protein At1g02770 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LMC2 | At1g19060 | UPF0725 protein At1g19060 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSRRVEYTLA | PPQRNESDGF | DYPDGIPISY | NLHRLRHFEC | EGSYPKYPYG | SLVKFYAMVG |
| 70 | 80 | 90 | 100 | 110 | 120 |
| LHRYNVLEGK | NLQLDTLKSF | NMRINCGASS | YYITLAARVP | DSGLKQIFQV | LVHEERLGSL |
| 130 | 140 | 150 | 160 | 170 | 180 |
| DMTCTIARPR | VTTNVPFLRP | HSESEYDYMD | NDELPDWPSE | IAFDDTKRFH | LVKESELRDN |
| 190 | 200 | 210 | 220 | 230 | 240 |
| DWIRLYLELT | LVAHDRFLTV | HYLSQLEIVK | VAIEEVEQPN | ASLNTKTTFV | YITYKDLAKA |
| 250 | 260 | 270 | 280 | 290 | 300 |
| QIGEPVDRKA | IVRKIINETT | GLLRLRGDYW | SGERSVITPE | EEYMLLHGGE | KVRNNEQRSK |
| 310 | 320 | ||||
| KLKRRVGVHR | LWRWWYQAYK | NRGLRSSSY |