Q9LJP4
Gene name |
CSLC4 |
Protein name |
Xyloglucan glycosyltransferase 4 |
Names |
Cellulose synthase-like protein C4, AtCslC4, Xyloglucan synthase 4 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT3G28180 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9LJP4
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9LJP4-F1 | Predicted | AlphaFoldDB |
21 variants for Q9LJP4
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_3_10506141_A_T | 11 | E>V | No | 1000Genomes | |
| tmp_3_10506151_C_A | 14 | D>E | No | 1000Genomes | |
| ENSVATH11108168 | 33 | R>H | No | 1000Genomes | |
| ENSVATH00358505 | 52 | L>V | No | 1000Genomes | |
| ENSVATH02230036 | 53 | I>V | No | 1000Genomes | |
| tmp_3_10506340_A_C | 77 | E>D | No | 1000Genomes | |
| ENSVATH14045578 | 81 | K>R | No | 1000Genomes | |
| ENSVATH05947092 | 110 | F>Y | No | 1000Genomes | |
| ENSVATH02230039 | 134 | M>L | No | 1000Genomes | |
| ENSVATH11108170 | 172 | G>C | No | 1000Genomes | |
| tmp_3_10506644_A_C | 179 | K>Q | No | 1000Genomes | |
| ENSVATH14045580 | 183 | P>A | No | 1000Genomes | |
| ENSVATH00358511 | 187 | E>D | No | 1000Genomes | |
| ENSVATH07987162 | 188 | E>K | No | 1000Genomes | |
| ENSVATH02230059 | 246 | L>I | No | 1000Genomes | |
| tmp_3_10507024_G_C | 259 | G>R | No | 1000Genomes | |
| tmp_3_10507964_G_T | 333 | D>Y | No | 1000Genomes | |
| ENSVATH05947124 | 374 | I>V | No | 1000Genomes | |
| tmp_3_10508286_G_A | 440 | R>Q | No | 1000Genomes | |
| ENSVATH14045648 | 593 | E>K | No | 1000Genomes | |
| ENSVATH05947134 | 620 | T>M | No | 1000Genomes |
No associated diseases with Q9LJP4
1 regional properties for Q9LJP4
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Glycosyltransferase 2-like | 293 - 499 | IPR001173 |
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| endosome | A vacuole to which materials ingested by endocytosis are delivered. |
| Golgi apparatus | A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. |
| Golgi membrane | The lipid bilayer surrounding any of the compartments of the Golgi apparatus. |
| Golgi trans cisterna | The Golgi cisterna farthest from the endoplasmic reticulum; the final processing compartment through which proteins pass before exiting the Golgi apparatus; the compartment in which N-linked protein glycosylation is completed. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| trans-Golgi network | The network of interconnected tubular and cisternal structures located within the Golgi apparatus on the side distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| glycosyltransferase activity | Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor). |
| protein homodimerization activity | Binding to an identical protein to form a homodimer. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| cell wall organization | A process that results in the assembly, arrangement of constituent parts, or disassembly of the cell wall, the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis. |
| plant organ development | Development of a plant organ, a multi-tissue plant structure that forms a functional unit. |
| pollen tube development | The process whose specific outcome is the progression of a pollen tube over time, from its initial formation to a mature structure. |
7 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q6AU53 | CSLC9 | Probable xyloglucan glycosyltransferase 9 | Oryza sativa subsp japonica (Rice) | PR |
| Q6L538 | CSLC7 | Probable xyloglucan glycosyltransferase 7 | Oryza sativa subsp japonica (Rice) | PR |
| Q7PC69 | CSLC3 | Probable xyloglucan glycosyltransferase 3 | Oryza sativa subsp japonica (Rice) | PR |
| Q69L19 | CSLC2 | Probable xyloglucan glycosyltransferase 2 | Oryza sativa subsp japonica (Rice) | PR |
| Q9SJA2 | CSLC8 | Probable xyloglucan glycosyltransferase 8 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SRT3 | CSLC6 | Probable xyloglucan glycosyltransferase 6 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9ZQB9 | CSLC12 | Probable xyloglucan glycosyltransferase 12 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAPNSVAVTM | EKPDNFSLLE | INGSDPSSFP | DKRKSISPKQ | FSWFLLLKAH | RLISCLSWLV |
| 70 | 80 | 90 | 100 | 110 | 120 |
| SSVKKRIAFS | AKNINEEEDP | KSRGKQMYRF | IKACLVISII | ALSIEIVAHF | KKWNLDLINR |
| 130 | 140 | 150 | 160 | 170 | 180 |
| PSWEVYGLVE | WSYMAWLSFR | SDYIAPLVIS | LSRFCTVLFL | IQSLDRLVLC | LGCFWIKFKK |
| 190 | 200 | 210 | 220 | 230 | 240 |
| IEPKLTEESI | DLEDPSSFPM | VLIQIPMCNE | REVYEQSIGA | ASQLDWPKDR | ILIQVLDDSD |
| 250 | 260 | 270 | 280 | 290 | 300 |
| DPNLQLLIKE | EVSVWAEKGV | NIIYRHRLIR | TGYKAGNLKS | AMTCDYVKDY | EFVTIFDADF |
| 310 | 320 | 330 | 340 | 350 | 360 |
| TPNPDFLKKT | VPHFKGNPEL | GLVQARWSFV | NKDENLLTRL | QNINLCFHFE | VEQQVNGVFL |
| 370 | 380 | 390 | 400 | 410 | 420 |
| NFFGFNGTAG | VWRIKALEES | GGWLERTTVE | DMDIAVRAHL | NGWKFIYLND | VEVTCELPES |
| 430 | 440 | 450 | 460 | 470 | 480 |
| YEAYKKQQHR | WHSGPMQLFR | LCLPSIIKSK | ISVWKKANLI | FLFFLLRKLI | LPFYSFTLFC |
| 490 | 500 | 510 | 520 | 530 | 540 |
| IILPLTMFIP | EAELPLWIIC | YVPIFISLLN | ILPSPKSFPF | LVPYLLFENT | MSITKFNAMI |
| 550 | 560 | 570 | 580 | 590 | 600 |
| SGLFQFGSAY | EWVVTKKTGR | SSESDLLAFA | EKEEKLHRRN | SESGLELLSK | LKEQETNLVG |
| 610 | 620 | 630 | 640 | 650 | 660 |
| QETVKKSLGG | LMRPKNKKKT | NMVFKKELGL | AFLLLTAAAR | SFLSAHGLHF | YFLLFQGLSF |
| 670 | |||||
| LVVGLDLIGE | QIS |