Q9LEZ3
Gene name |
BIM1 (BHLH46, EN126, At5g08130, T22D6.70) |
Protein name |
Transcription factor BIM1 |
Names |
BES1-interacting Myc-like protein 1, Basic helix-loop-helix protein 46, AtbHLH46, bHLH 46, Transcription factor EN 126, bHLH transcription factor bHLH046 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT5G08130 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9LEZ3
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9LEZ3-F1 | Predicted | AlphaFoldDB |
28 variants for Q9LEZ3
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH00611853 | 12 | Q>E | No | 1000Genomes | |
| ENSVATH13959261 | 17 | T>A | No | 1000Genomes | |
| ENSVATH03037035 | 35 | P>L | No | 1000Genomes | |
| ENSVATH10648496 | 66 | R>S | No | 1000Genomes | |
| ENSVATH03037029 | 75 | E>Q | No | 1000Genomes | |
| tmp_5_2608703_A_G | 104 | Y>H | No | 1000Genomes | |
| ENSVATH06939902 | 122 | M>I | No | 1000Genomes | |
| ENSVATH06939900 | 145 | A>T | No | 1000Genomes | |
| ENSVATH06939896 | 180 | A>P | No | 1000Genomes | |
| ENSVATH13959256 | 188 | V>M | No | 1000Genomes | |
| tmp_5_2608337_C_G | 192 | R>P | No | 1000Genomes | |
| ENSVATH06939895 | 202 | S>R | No | 1000Genomes | |
| tmp_5_2608305_C_T | 203 | G>S | No | 1000Genomes | |
| ENSVATH00611852 | 207 | L>R | No | 1000Genomes | |
| ENSVATH06939894 | 211 | Q>P | No | 1000Genomes | |
| ENSVATH06939893 | 234 | D>G | No | 1000Genomes | |
| tmp_5_2608124_T_C | 235 | D>G | No | 1000Genomes | |
| tmp_5_2607953_C_T | 264 | D>N | No | 1000Genomes | |
| ENSVATH00611847 | 334 | V>E | No | 1000Genomes | |
| tmp_5_2607543_A_C | 336 | S>A | No | 1000Genomes | |
| ENSVATH10648467 | 359 | V>I | No | 1000Genomes | |
| tmp_5_2607314_T_A | 375 | N>I | No | 1000Genomes | |
| ENSVATH06939886 | 402 | L>F | No | 1000Genomes | |
| ENSVATH06939883 | 428 | S>P | No | 1000Genomes | |
| ENSVATH00611845 | 432 | V>I | Plants were checked bi-weekly for presence of first buds and the average flowering time of 4 plants of the same accession were collected [10c and 16 hrs daylight] Number of days following stratification to opening of first flower. the experiment was stopped at 200 d and accessions that had not flowered at that point were assigned a value of 200 [18c and 16 hrs daylight] Plants were checked bi-weekly for presence of first buds and the average flowering time of 4 plants of the same accession were collected [22c and 16 hrs daylight] Plants were checked bi-weekly for presence of first buds and the average flowering time of 4 plants of the same accession were collected [16c and 16 hrs daylight] Plants were checked bi-weekly for presence of first buds and the average leaf number at flowering time of 4 plants of the same accession were collected [16c and 16 hrs daylight] Number of days required for the bolt height to reach 5cm [23c and 16hrs daylight. vernalized for 2 wks at 5c and 8hrs daylight] Plants were checked bi-weekly for presence of first buds and the average leaf number at flowering time of 4 plants of the same accession were collected [22c and 16 hrs daylight] [EnsemblGenome] | No | 1000Genomes |
| tmp_5_2606862_T_A | 492 | K>I | No | 1000Genomes | |
| ENSVATH00611844 | 504 | V>I | No | 1000Genomes | |
| tmp_5_2606680_G_A | 522 | P>L | No | 1000Genomes |
No associated diseases with Q9LEZ3
1 regional properties for Q9LEZ3
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Domain of unknown function DUF4515 | 84 - 265 | IPR032777 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| DNA-binding transcription factor activity | A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. |
| identical protein binding | Binding to an identical protein or proteins. |
| protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MELPQPRPFK | TQGRKPTHDF | LSLCSHSTVH | PDPKPTPPPS | SQGSHLKTHD | FLQPLECVGA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| KEDVSRINST | TTASEKPPPP | APPPPLQHVL | PGGIGTYTIS | PIPYFHHHHQ | RIPKPELSPP |
| 130 | 140 | 150 | 160 | 170 | 180 |
| MMFNANERNV | LDENSNSNCS | SYAAASSGFT | LWDESASGKK | GQTRKENSVG | ERVNMRADVA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| ATVGQWPVAE | RRSQSLTNNH | MSGFSSLSSS | QGSVLKSQSF | MDMIRSAKGS | SQEDDLDDEE |
| 250 | 260 | 270 | 280 | 290 | 300 |
| DFIMKKESSS | TSQSHRVDLR | VKADVRGSPN | DQKLNTPRSK | HSATEQRRRS | KINDRFQMLR |
| 310 | 320 | 330 | 340 | 350 | 360 |
| QLIPNSDQKR | DKASFLLEVI | EYIQFLQEKA | DKYVTSYQGW | NHEPAKLLNW | QSNNNQQLVP |
| 370 | 380 | 390 | 400 | 410 | 420 |
| EGVAFAPKLE | EEKNNIPVSV | LATAQGVVID | HPTTATTSPF | PLSIQSNSFF | SPVIAGNPVP |
| 430 | 440 | 450 | 460 | 470 | 480 |
| QFHARVASSE | AVEPSPSSRS | QKEEEDEEVL | EGNIRISSVY | SQGLVKTLRE | ALENSGVDLT |
| 490 | 500 | 510 | 520 | ||
| KASISVEIEL | AKQSSSSSFK | DHEVREPVSR | TRNDNVKQTR | KPKRLKTGQ |