Q9KVX4
Gene name |
recF (VC_0014) |
Protein name |
DNA replication and repair protein RecF |
Names |
|
Species |
Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) |
KEGG Pathway |
vch:VC_0014 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9KVX4
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9KVX4-F1 | Predicted | AlphaFoldDB |
No variants for Q9KVX4
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q9KVX4 | |||||
No associated diseases with Q9KVX4
3 regional properties for Q9KVX4
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | RecF/RecN/SMC, N-terminal | 3 - 359 | IPR003395 |
| conserved_site | DNA-binding, RecF, conserved site | 122 - 142 | IPR018078-1 |
| conserved_site | DNA-binding, RecF, conserved site | 303 - 321 | IPR018078-2 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| single-stranded DNA binding | Binding to single-stranded DNA. |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| DNA replication | The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA. |
| DNA synthesis involved in DNA repair | Synthesis of DNA that proceeds from the broken 3' single-strand DNA end and uses the homologous intact duplex as the template. |
| double-strand break repair | The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix. |
| SOS response | An error-prone process for repairing damaged microbial DNA. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MPLSRLMIQQ | FRNIKACDIR | LSAGFNFLIG | PNGSGKTSVL | EAIYLLGHGR | SFKSSLTGRI |
| 70 | 80 | 90 | 100 | 110 | 120 |
| IQNECSELFV | HGRICEHSLS | SDQFELPVGI | NKQRDGSTEV | KIGGQTGQKL | AQLAQILPLQ |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LIHPEGFELL | TDGPKQRRAF | IDWGVFHTEP | AFFDAWGRFK | RLSKQRNALL | KSAQSYRELS |
| 190 | 200 | 210 | 220 | 230 | 240 |
| YWDQELARLA | EQIDQWRESY | VNQLKNVAEQ | LCRTFLPEFD | IDLKYYRGWE | KDQPYQSILE |
| 250 | 260 | 270 | 280 | 290 | 300 |
| KNFERDQQLG | YTFSGPNKAD | LRIKVNATPV | EDVLSRGQLK | LMVCALRVAQ | GQHLTELTGK |
| 310 | 320 | 330 | 340 | 350 | 360 |
| QCIYLIDDFA | SELDSLRRQR | LADSLKGTGA | QVFVSSITES | QVADMLDESS | KTFHVAHGVI |
| EQG |