Q9FY50
Gene name |
RPL10 (At5g13510, T6I14_40) |
Protein name |
50S ribosomal protein L10, chloroplastic |
Names |
CL10 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT5G13510 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9FY50
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9FY50-F1 | Predicted | AlphaFoldDB |
8 variants for Q9FY50
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_5_4341322_C_T | 10 | S>F | No | 1000Genomes | |
| ENSVATH00620467 | 18 | Q>H | No | 1000Genomes | |
| ENSVATH06963132 | 20 | I>S | No | 1000Genomes | |
| ENSVATH06963134 | 31 | P>S | No | 1000Genomes | |
| tmp_5_4341443_G_C | 50 | E>D | No | 1000Genomes | |
| ENSVATH14017883 | 161 | A>T | No | 1000Genomes | |
| ENSVATH14017884 | 163 | D>G | No | 1000Genomes | |
| ENSVATH06963137 | 215 | E>K | No | 1000Genomes |
No associated diseases with Q9FY50
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| chloroplast | A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. |
| chloroplast envelope | The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space. |
| chloroplast stroma | The space enclosed by the double membrane of a chloroplast but excluding the thylakoid space. It contains DNA, ribosomes and some temporary products of photosynthesis. |
| cytosolic ribosome | A ribosome located in the cytosol. |
| large ribosomal subunit | The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). |
| plastid | Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| rRNA binding | Binding to a ribosomal RNA. |
| structural constituent of ribosome | The action of a molecule that contributes to the structural integrity of the ribosome. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| translation | The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9VPL3 | mRpL10 | 39S ribosomal protein L10, mitochondrial | Drosophila melanogaster (Fruit fly) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MEVALLSFSS | SLSPLCHQRI | STLTPKTSNS | PNYPRLPVIR | SAVSRNKKEE | TVEAVKSHLE |
| 70 | 80 | 90 | 100 | 110 | 120 |
| NCHLLAAINY | KGLTVKQFQD | LRRTLPDTTK | LIVAKNTLVF | KAIEGTKWEA | LKPCMKGMNA |
| 130 | 140 | 150 | 160 | 170 | 180 |
| WLFVQTDEIP | SAIKPYRSFQ | KERKLENNDF | AGAVFEGKFY | APDNFKVLET | MPTRAEVYAK |
| 190 | 200 | 210 | |||
| MLGALQSPAI | NLVTTLQAPA | REVIMVLMAY | IKKLEDESNA |