Q9FVU0
Gene name |
CYB (At1g57620, T8L23.9) |
Protein name |
Transmembrane emp24 domain-containing protein p24delta4 |
Names |
Protein CYTOPLASMIC BODIES, p24 family protein delta1b, p24delta1b, p24 family protein delta4, p24delta4 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT1G57620 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9FVU0
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9FVU0-F1 | Predicted | AlphaFoldDB |
26 variants for Q9FVU0
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_1_21342881_C_T | 7 | P>S | No | 1000Genomes | |
| ENSVATH14339105 | 9 | T>A | No | 1000Genomes | |
| ENSVATH04983392 | 14 | A>S | No | 1000Genomes | |
| ENSVATH01383859 | 17 | F>S | No | 1000Genomes | |
| ENSVATH01383860 | 18 | S>F | No | 1000Genomes | |
| tmp_1_21342917_C_G | 19 | L>V | No | 1000Genomes | |
| ENSVATH04983394 | 20 | S>L | No | 1000Genomes | |
| ENSVATH04983395 | 23 | C>Y | No | 1000Genomes | |
| ENSVATH01383863 | 50 | A>G | No | 1000Genomes | |
| ENSVATH13609297 | 57 | E>A | No | 1000Genomes | |
| tmp_1_21343055_G_C,A | 65 | V>I | No | 1000Genomes | |
| tmp_1_21343055_G_C,A | 65 | V>L | No | 1000Genomes | |
| ENSVATH04983426 | 79 | H>N | No | 1000Genomes | |
| tmp_1_21343990_A_G | 81 | E>G | No | 1000Genomes | |
| ENSVATH13609327 | 83 | T>A | No | 1000Genomes | |
| tmp_1_21344054_T_A | 102 | F>L | No | 1000Genomes | |
| ENSVATH13609328 | 106 | A>P | No | 1000Genomes | |
| tmp_1_21344071_G_C | 108 | S>T | No | 1000Genomes | |
| tmp_1_21344317_A_G | 153 | E>G | No | 1000Genomes | |
| tmp_1_21344316_G_A | 153 | E>K | No | 1000Genomes | |
| tmp_1_21344441_G_T,A | 167 | A>S | No | 1000Genomes | |
| tmp_1_21344441_G_T,A | 167 | A>T | No | 1000Genomes | |
| tmp_1_21344498_A_C | 186 | M>L | No | 1000Genomes | |
| tmp_1_21344523_T_C | 194 | V>A | No | 1000Genomes | |
| ENSVATH00102198 | 199 | I>V | No | 1000Genomes | |
| ENSVATH13609333 | 204 | Q>L | No | 1000Genomes |
No associated diseases with Q9FVU0
1 regional properties for Q9FVU0
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | GOLD domain | 25 - 207 | IPR009038 |
Functions
7 GO annotations of cellular component
| Name | Definition |
|---|---|
| COPII-coated ER to Golgi transport vesicle | A vesicle with a coat formed of the COPII coat complex proteins. The COPII coat complex is formed by the Sec23p/Sec24p and the Sec13p/Sec31p heterodimers. COPII-associated vesicles transport proteins from the rough endoplasmic reticulum to the Golgi apparatus (anterograde transport). |
| endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). |
| endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. |
| endoplasmic reticulum-Golgi intermediate compartment | A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi and Golgi-to-ER transport. |
| Golgi apparatus | A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. |
| Golgi membrane | The lipid bilayer surrounding any of the compartments of the Golgi apparatus. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| endoplasmic reticulum to Golgi vesicle-mediated transport | The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi. |
| Golgi organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the Golgi apparatus. |
| intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MKKKMIPTTI | LLSALIFSLS | PICEAVWLTV | PHTGSKCVSE | EIQSNVIVLA | DYLVISEEHS |
| 70 | 80 | 90 | 100 | 110 | 120 |
| IFPTVSVKVT | APYGTVLHHR | ENTTNGQFAF | TTQESGTYLA | CFEADAKSHG | NKDFSINIDW |
| 130 | 140 | 150 | 160 | 170 | 180 |
| KTGIAAKDWD | SIARKEKIEG | VELEFKKLEG | AVEAIHENLI | YLRNREAEMR | IVSEKTNSRV |
| 190 | 200 | 210 | |||
| AWYSIMSLGI | CIVVSGLQIL | YLKQYFEKKK | LI |