Q9FGP9
Gene name |
RER1 |
Protein name |
Protein RETICULATA-RELATED 1, chloroplastic |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT5G22790 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9FGP9
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9FGP9-F1 | Predicted | AlphaFoldDB |
36 variants for Q9FGP9
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_5_7601555_T_G | 7 | I>L | No | 1000Genomes | |
| ENSVATH07014756 | 7 | I>N | No | 1000Genomes | |
| ENSVATH00639120 | 13 | F>L | No | 1000Genomes | |
| ENSVATH00639119 | 15 | N>D | No | 1000Genomes | |
| tmp_5_7601524_C_T | 17 | G>E | No | 1000Genomes | |
| ENSVATH07014755 | 27 | S>I | No | 1000Genomes | |
| ENSVATH07014754 | 31 | E>G | No | 1000Genomes | |
| ENSVATH10932058 | 58 | N>I | No | 1000Genomes | |
| tmp_5_7601318_C_A | 86 | V>L | No | 1000Genomes | |
| tmp_5_7601306_T_G | 90 | T>P | No | 1000Genomes | |
| tmp_5_7601287_G_A | 96 | P>L | No | 1000Genomes | |
| tmp_5_7601285_C_T | 97 | E>K | No | 1000Genomes | |
| tmp_5_7601273_C_A | 101 | G>C | No | 1000Genomes | |
| ENSVATH07014753 | 107 | N>D | No | 1000Genomes | |
| tmp_5_7601240_C_T | 112 | G>S | No | 1000Genomes | |
| ENSVATH10932057 | 113 | G>A | No | 1000Genomes | |
| ENSVATH14132080 | 125 | G>S | No | 1000Genomes | |
| tmp_5_7601198_C_T | 126 | G>R | No | 1000Genomes | |
| tmp_5_7601195_C_T | 127 | D>N | No | 1000Genomes | |
| tmp_5_7601145_C_G | 143 | K>N | No | 1000Genomes | |
| ENSVATH10932004 | 193 | V>L | No | 1000Genomes | |
| tmp_5_7600742_A_T | 224 | V>E | No | 1000Genomes | |
| tmp_5_7600601_T_A | 271 | Y>F | No | 1000Genomes | |
| ENSVATH14132079 | 273 | R>C | No | 1000Genomes | |
| tmp_5_7600566_C_T | 283 | G>S | No | 1000Genomes | |
| tmp_5_7600551_G_C | 288 | L>V | No | 1000Genomes | |
| ENSVATH00639117 | 293 | A>G | No | 1000Genomes | |
| tmp_5_7600348_C_T | 311 | V>I | No | 1000Genomes | |
| tmp_5_7600321_A_T | 320 | Y>N | No | 1000Genomes | |
| ENSVATH07014747 | 331 | G>S | No | 1000Genomes | |
| tmp_5_7600203_C_A | 331 | G>V | No | 1000Genomes | |
| ENSVATH07014745 | 350 | V>M | No | 1000Genomes | |
| ENSVATH07014744 | 354 | E>A | No | 1000Genomes | |
| tmp_5_7600023_C_A | 354 | E>D | No | 1000Genomes | |
| ENSVATH07014736 | 379 | A>V | No | 1000Genomes | |
| tmp_5_7599490_C_A | 403 | V>F | No | 1000Genomes |
No associated diseases with Q9FGP9
No regional properties for Q9FGP9
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q9FGP9 | |||
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| chloroplast envelope | The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space. |
| chloroplast inner membrane | The inner, i.e. lumen-facing, lipid bilayer of the chloroplast envelope; also faces the chloroplast stroma. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| plastid | Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| plant organ development | Development of a plant organ, a multi-tissue plant structure that forms a functional unit. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSISLKISHI | SSFSNDGFNS | VKQCRVSQRF | EIRSVCFRRS | PGVESRRIHL | NSDLSSRNLR |
| 70 | 80 | 90 | 100 | 110 | 120 |
| NRCVGSDVVT | GEISGRSIPD | WAYSGVKDET | LSDLEPELDD | GDGGDENGNN | DGGGNGGNGD |
| 130 | 140 | 150 | 160 | 170 | 180 |
| GGGGGGDGEG | DDGEDEADKA | EEKEFGPILK | FEEVMKETER | RGITLPEDML | EAAKSVGIRK |
| 190 | 200 | 210 | 220 | 230 | 240 |
| LFLLRYLDLQ | GSVWPLGFLM | RSCAMLRNRM | LADPSFLFKV | GTEVAIDSCC | ATFAEVQKRG |
| 250 | 260 | 270 | 280 | 290 | 300 |
| EDFWSEFELY | AADLLVGLVV | DVALVGLLAP | YARIGKPSVA | STGLFKDLKR | ACASLPSSVF |
| 310 | 320 | 330 | 340 | 350 | 360 |
| EAERPGCKFS | VNQRIATFFY | KGLLYGSVGF | GCGLIGQGIA | NLIMTAKRSV | KKSEEDVPIP |
| 370 | 380 | 390 | 400 | 410 | 420 |
| PLFESAALWG | VFLGLSSNAR | YQIINGLERV | VEGSTAAKRI | PVVAMAFTVG | VRFANNVYGG |
| 430 | |||||
| MQFVDWAKLS | GVQ |