Q9BZQ6
Gene name |
EDEM3 (C1orf22) |
Protein name |
ER degradation-enhancing alpha-mannosidase-like protein 3 |
Names |
Alpha-1,2-mannosidase EDEM3 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:80267 |
EC number |
3.2.1.113: Glycosidases, ie enzymes hydrolyzing O- and S-glycosyl compounds |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9BZQ6
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9BZQ6-F1 | Predicted | AlphaFoldDB |
687 variants for Q9BZQ6
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs777353823 CA1287765 VAR_086113 |
61 | D>G | CDG2V; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt ExAC TOPMed dbSNP gnomAD |
| VAR_086114 | 314 | R>del | CDG2V; unknown pathological significance [UniProt] | Yes | UniProt |
| VAR_086115 | 456 | D>N | CDG2V; unknown pathological significance [UniProt] | Yes | UniProt |
|
VAR_086116 CA33385182 rs902837579 |
469 | Y>missing | CDG2V; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt TOPMed dbSNP |
|
VAR_086116 rs902837579 |
469 | Y>del | CDG2V; unknown pathological significance [UniProt] | Yes |
UniProt dbSNP |
|
rs185774628 CA343868852 |
2 | S>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1450897709 CA343868845 |
2 | S>N | No |
ClinGen gnomAD |
|
|
rs185774628 CA1287833 |
2 | S>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1470459699 CA343868785 |
4 | A>T | No |
ClinGen TOPMed |
|
|
CA1287831 rs562390785 |
4 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA343868720 rs1296740190 |
6 | G>S | No |
ClinGen gnomAD |
|
|
rs752781403 CA343868691 |
7 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752781403 CA1287825 |
7 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752781403 CA1287826 |
7 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778081951 CA1287827 |
7 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1231713225 CA343868629 |
10 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
CA343868624 rs1231713225 |
10 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs755484875 CA1287823 |
11 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1331024254 CA343868616 |
11 | S>T | No |
ClinGen TOPMed gnomAD |
|
|
CA343868594 rs1262253084 |
12 | P>L | No |
ClinGen TOPMed |
|
|
CA343868601 rs1358908585 |
12 | P>T | No |
ClinGen gnomAD |
|
|
CA1287821 rs766765884 |
13 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA343868566 rs776255897 |
14 | P>L | No |
ClinGen gnomAD |
|
|
CA33386335 rs776255897 |
14 | P>R | No |
ClinGen gnomAD |
|
| TCGA novel | 14 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1410261594 CA343868562 |
15 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
CA343868545 rs1366873802 |
15 | Q>L | No |
ClinGen gnomAD |
|
|
CA343868521 rs760305934 |
16 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760305934 CA1287820 |
16 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200912232 CA1287819 |
17 | A>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1287818 rs767091932 |
18 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287816 rs773802459 |
19 | W>R | No |
ClinGen ExAC gnomAD |
|
|
CA343868391 rs1480870041 |
20 | R>G | No |
ClinGen TOPMed |
|
|
CA1287814 rs193034365 CA1287815 |
20 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1287813 rs775206379 |
21 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA33386325 rs1028624037 |
21 | L>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA33386321 rs370757732 |
22 | V>A | No |
ClinGen Ensembl |
|
|
rs1168934491 CA343868327 |
22 | V>L | No |
ClinGen TOPMed |
|
| TCGA novel | 22 | V>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs201050441 CA33386320 |
24 | A>G | No |
ClinGen gnomAD |
|
|
rs769644093 CA1287812 |
25 | T>M | No |
ClinGen ExAC gnomAD |
|
|
CA1287810 rs778169826 |
26 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA1287811 rs745590804 |
26 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs778169826 CA343868198 |
26 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA33386313 rs963130879 |
29 | C>Y | No |
ClinGen Ensembl |
|
|
rs866960319 CA33386308 |
33 | A>T | No |
ClinGen Ensembl |
|
|
rs1326242728 CA343867981 |
34 | T>P | No |
ClinGen TOPMed |
|
|
CA1287806 rs755507094 |
35 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1422658014 CA343867936 |
36 | V>G | No |
ClinGen gnomAD |
|
|
rs754360198 CA343867946 |
36 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA1287805 rs754360198 |
36 | V>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 37 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1287803 rs756478612 |
39 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA1287801 rs767181519 |
40 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs537587048 CA1287800 |
41 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287799 rs773892037 |
42 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343867585 rs1571440002 |
44 | M>I | No |
ClinGen Ensembl |
|
|
rs374881926 CA1287798 |
44 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1287797 rs762312178 |
47 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287795 rs769575996 |
50 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA33386284 rs905453166 |
51 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA33386282 rs1045018600 |
52 | L>F | No |
ClinGen Ensembl |
|
|
CA1287766 rs774641568 |
55 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs975006592 CA343865428 |
59 | M>R | No |
ClinGen TOPMed gnomAD |
|
|
rs975006592 CA33385457 |
59 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
CA343865390 rs1179707092 |
62 | H>D | No |
ClinGen gnomAD |
|
|
rs908662838 CA343865382 |
62 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA33385455 rs991933571 |
63 | A>P | No |
ClinGen Ensembl |
|
|
CA343865363 rs1331454699 |
64 | Y>C | No |
ClinGen TOPMed |
|
|
CA1287764 rs749410139 |
67 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1160654516 CA343865296 |
68 | M>V | No |
ClinGen gnomAD |
|
|
CA1287742 rs771377588 |
69 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA1287741 rs747448781 |
70 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343865143 rs1297311583 |
71 | A>D | No |
ClinGen gnomAD |
|
|
rs1393878926 CA343865129 |
73 | P>R | No |
ClinGen gnomAD |
|
|
rs1415292609 CA343865131 |
73 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs777966032 CA1287740 |
74 | A>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 80 | L>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343865066 rs1470626856 |
82 | C>Y | No |
ClinGen gnomAD |
|
|
rs1408921925 CA343865057 |
83 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1166557608 CA343865049 |
85 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA1287739 rs758133289 |
85 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287737 rs778654315 |
87 | R>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 87 | R>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs201518061 CA33403181 |
88 | G>S | No |
ClinGen gnomAD |
|
|
CA343865014 rs1454212108 |
90 | E>D | No |
ClinGen TOPMed |
|
|
CA343865020 rs1242683763 |
90 | E>Q | No |
ClinGen gnomAD |
|
|
rs754543278 CA1287736 |
92 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1462638238 CA343864998 |
93 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs199771567 CA1287735 |
93 | R>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA33403153 rs146347520 |
94 | G>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs146347520 CA1287733 |
94 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA343864982 rs767212054 |
96 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287731 rs767212054 |
96 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343864971 rs1358277218 |
97 | D>E | No |
ClinGen gnomAD |
|
|
CA1287729 rs775692658 |
99 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775692658 CA1287730 |
99 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1558067102 CA343864948 |
101 | G>E | No |
ClinGen Ensembl |
|
|
CA1287707 rs751305996 |
106 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA1287706 rs765489933 |
112 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs759721775 CA1287705 |
113 | T>A | No |
ClinGen ExAC |
|
|
rs1257308126 CA343864856 |
114 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA343864834 rs1323443357 |
116 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs767960652 CA1287681 |
118 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA33400798 rs534407860 |
119 | K>R | No |
ClinGen Ensembl |
|
|
CA343864788 CA1287679 rs774924847 |
122 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287680 rs762382335 |
122 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA1287677 rs763352377 |
126 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA1287675 rs201274616 |
132 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1287674 rs769437943 |
132 | R>T | No |
ClinGen ExAC gnomAD |
|
|
CA1287672 rs201235401 |
133 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287673 rs201235401 |
133 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1418464476 CA343864712 |
134 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1168145724 CA343864688 |
137 | D>G | No |
ClinGen gnomAD |
|
|
CA343864690 rs1434515361 |
137 | D>N | No |
ClinGen TOPMed |
|
|
rs148083344 CA343864678 |
138 | N>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA343864671 rs777627529 CA1287669 |
139 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287670 rs746933616 |
139 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs377593638 CA1287668 |
140 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs756340605 CA1287666 |
142 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756340605 CA1287665 |
142 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343864631 rs1215448424 |
146 | E>G | No |
ClinGen gnomAD |
|
|
CA343864626 rs1344568328 |
147 | T>A | No |
ClinGen gnomAD |
|
|
rs1313075388 CA343864622 |
147 | T>R | No |
ClinGen gnomAD |
|
|
rs982867597 CA33400718 |
149 | I>V | No |
ClinGen Ensembl |
|
|
rs377303985 CA33399541 |
157 | G>S | No |
ClinGen gnomAD |
|
|
CA343864535 rs1424829428 |
159 | H>R | No |
ClinGen gnomAD |
|
|
CA343864519 rs1455436603 |
162 | A>T | No |
ClinGen TOPMed |
|
|
rs1191639229 CA343864493 |
166 | K>E | No |
ClinGen TOPMed |
|
|
CA343864453 rs1172694034 |
171 | Y>C | No |
ClinGen TOPMed |
|
|
CA1287644 rs751651222 |
171 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764746719 CA1287643 |
172 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs201115464 CA1287642 |
173 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA33399505 rs1032334286 |
175 | Y>H | No |
ClinGen Ensembl |
|
|
rs753068002 CA1287641 |
176 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287640 rs765619816 |
176 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287639 rs200598664 |
177 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1442108188 CA343864399 |
178 | E>D | No |
ClinGen TOPMed |
|
|
CA343864389 rs1267136670 |
180 | L>F | No |
ClinGen gnomAD |
|
|
CA33399486 rs1005580271 |
182 | M>T | No |
ClinGen TOPMed |
|
|
rs760197678 CA1287637 |
184 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287634 rs772041952 |
189 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA343864318 rs1197561508 |
190 | L>F | No |
ClinGen TOPMed |
|
|
rs748116675 CA1287633 |
191 | L>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 191 | L>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1287632 rs41264582 |
192 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1287629 rs781597649 |
194 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs757529410 CA1287628 |
195 | N>H | No |
ClinGen ExAC gnomAD |
|
|
rs138221490 CA1287627 |
195 | N>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA1287626 rs777995167 |
196 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA343864283 rs777995167 |
196 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA1287625 rs758886936 |
197 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287624 rs753258407 |
198 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA1287623 rs779217680 |
201 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs1160565058 CA343864247 |
202 | Y>F | No |
ClinGen gnomAD |
|
|
CA343864240 rs1558063436 |
203 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
| TCGA novel | 206 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1287604 rs373653001 |
208 | K>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1287603 rs371675210 |
210 | G>A | No |
ClinGen ESP ExAC gnomAD |
|
|
rs142115161 CA1287601 |
211 | I>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs142115161 CA1287602 |
211 | I>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA33395359 rs142115161 |
211 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs750090347 CA1287600 |
213 | K>I | No |
ClinGen ExAC gnomAD |
|
|
CA33395333 rs143845581 |
216 | A>T | No |
ClinGen ESP |
|
|
CA343864138 rs200009814 |
217 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287598 rs202039206 |
217 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs200009814 CA1287599 |
217 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs146164488 CA1287596 |
219 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs972979004 CA33395296 |
224 | T>A | No |
ClinGen Ensembl |
|
|
CA33395278 rs1022543725 |
230 | G>C | No |
ClinGen Ensembl |
|
|
rs917945729 CA33395265 |
234 | L>F | No |
ClinGen gnomAD |
|
|
CA343864031 rs917945729 |
234 | L>V | No |
ClinGen gnomAD |
|
|
rs759333973 CA1287591 |
237 | A>S | No |
ClinGen ExAC |
|
|
rs1384619210 CA343863992 |
240 | S>G | No |
ClinGen gnomAD |
|
|
CA33395258 rs991305425 |
241 | R>Q | No |
ClinGen Ensembl |
|
|
CA343863975 rs1444057705 |
242 | F>L | No |
ClinGen gnomAD |
|
|
CA343863964 rs1222304821 |
244 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA343863962 rs1222304821 |
244 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
CA1287590 rs773596173 |
245 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA33395248 rs959522417 |
246 | T>A | No |
ClinGen Ensembl |
|
|
CA1287589 rs772134316 |
246 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs150812544 CA343863952 |
247 | I>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1287586 rs769274417 |
247 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs150812544 CA1287587 |
247 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1558059100 CA343863934 |
249 | E>G | No |
ClinGen Ensembl |
|
|
CA343863907 rs1213490351 |
251 | Y>C | No |
ClinGen TOPMed |
|
|
rs781404788 CA1287552 |
252 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA1287551 rs756989904 |
253 | R>K | No |
ClinGen ExAC |
|
| TCGA novel | 254 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA33394102 rs746654363 |
255 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287550 rs746654363 |
255 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343863878 rs1197000981 |
256 | L>F | No |
ClinGen gnomAD |
|
|
CA343863869 rs1423746292 |
257 | D>A | No |
ClinGen TOPMed |
|
|
CA343863873 rs1479928689 |
257 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
CA343863874 rs1479928689 |
257 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA343863871 rs1423746292 |
257 | D>V | No |
ClinGen TOPMed |
|
|
CA343863872 rs1479928689 |
257 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1186152843 CA343863866 |
258 | F>I | No |
ClinGen TOPMed |
|
|
CA343863860 rs1571386344 |
258 | F>L | No |
ClinGen Ensembl |
|
|
CA343863856 rs1366262071 |
259 | L>F | No |
ClinGen TOPMed |
|
| TCGA novel | 260 | W>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343863838 rs1158915164 |
261 | E>V | No |
ClinGen TOPMed |
|
|
rs1351402299 CA343863835 |
262 | K>E | No |
ClinGen Ensembl |
|
|
CA1287548 rs758009767 |
265 | R>* | No |
ClinGen ExAC gnomAD |
|
|
rs540617947 CA1287547 |
265 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA343863808 rs1208721591 |
266 | S>G | No |
ClinGen gnomAD |
|
|
CA343863806 rs1330406712 |
266 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1330406712 CA343863805 |
266 | S>T | No |
ClinGen TOPMed gnomAD |
|
|
CA343863798 rs1395446140 |
267 | S>N | No |
ClinGen TOPMed |
|
|
rs765312761 CA343863789 |
268 | N>I | No |
ClinGen ExAC TOPMed |
|
|
rs765312761 CA1287546 |
268 | N>S | No |
ClinGen ExAC TOPMed |
|
|
rs369225337 CA1287545 |
271 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs528899420 CA1287541 |
272 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1287542 rs528899420 |
272 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs1275691321 CA343863755 |
274 | I>T | No |
ClinGen gnomAD |
|
|
CA33394085 rs956872473 |
274 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1571386170 CA343863738 |
276 | I>M | No |
ClinGen Ensembl |
|
|
CA343863727 rs1438807375 |
278 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1483200715 CA343863720 |
279 | G>E | No |
ClinGen TOPMed |
|
|
rs752166852 CA1287540 |
280 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA343863697 rs1390703707 |
282 | V>A | No |
ClinGen gnomAD |
|
|
CA343863700 rs1435798313 |
282 | V>I | No |
ClinGen gnomAD |
|
|
CA1287538 rs775527038 |
283 | R>* | No |
ClinGen ExAC gnomAD |
|
|
CA1287537 rs745895034 |
283 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs760990159 CA1287510 |
285 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA33392949 rs942092624 |
285 | D>G | No |
ClinGen TOPMed |
|
|
rs1436390075 CA343863657 |
287 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs773678013 CA1287509 |
302 | A>G | No |
ClinGen ExAC |
|
|
rs910677262 CA33392937 |
302 | A>T | No |
ClinGen TOPMed |
|
|
rs1274218919 CA343863547 |
303 | Y>C | Variant assessed as Somatic; 4.641e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1415686282 CA343863540 |
304 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA33392930 rs202044883 |
304 | V>I | No |
ClinGen Ensembl |
|
|
CA1287508 rs771914694 |
308 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 308 | D>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs747792603 CA343863504 |
310 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287507 rs747792603 |
310 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778654108 CA1287506 |
313 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs768290411 CA1287505 |
314 | R>S | No |
ClinGen ExAC |
|
|
CA343863456 rs1379772001 |
316 | N>K | No |
ClinGen gnomAD |
|
|
CA1287504 rs139183949 |
317 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA343863426 rs1160330851 |
319 | Y>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs772581318 CA1287488 |
320 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA1287487 rs762204619 |
322 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 323 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1042547327 CA33391943 |
323 | M>V | No |
ClinGen Ensembl |
|
|
rs774182309 CA1287486 |
324 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs774182309 CA343863393 |
324 | R>T | No |
ClinGen ExAC gnomAD |
|
|
rs768309622 CA1287485 |
327 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs1213640644 CA343863354 |
329 | P>L | No |
ClinGen gnomAD |
|
|
CA343863357 rs1248466647 |
329 | P>T | No |
ClinGen gnomAD |
|
|
rs1315267291 CA343863327 |
334 | D>G | No |
ClinGen gnomAD |
|
|
CA33391932 rs1010382377 |
334 | D>H | No |
ClinGen Ensembl |
|
|
rs1315267291 CA343863326 |
334 | D>V | No |
ClinGen gnomAD |
|
|
rs901363850 CA33391930 |
335 | V>A | No |
ClinGen Ensembl |
|
|
CA343863314 rs1268582846 |
336 | H>R | No |
ClinGen gnomAD |
|
|
rs1229969887 CA343863305 |
337 | I>S | No |
ClinGen gnomAD |
|
|
rs528434285 CA1287482 |
339 | K>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1386922814 CA343863285 |
340 | P>Q | No |
ClinGen gnomAD |
|
|
CA343863278 rs1286597528 |
341 | M>T | No |
ClinGen gnomAD |
|
|
CA343863281 rs1353561751 |
341 | M>V | No |
ClinGen TOPMed |
|
|
CA1287480 rs745829552 |
345 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA343863253 rs1433584115 |
345 | R>W | No |
ClinGen gnomAD |
|
|
CA33391919 rs1022810111 |
347 | W>G | No |
ClinGen TOPMed |
|
|
rs1321760670 CA343863241 |
347 | W>S | No |
ClinGen gnomAD |
|
|
CA343863214 rs1558054481 |
350 | A>V | No |
ClinGen Ensembl |
|
|
rs781039239 CA1287479 |
357 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs1376227495 CA343863156 |
359 | Q>R | No |
ClinGen gnomAD |
|
|
rs776571043 CA1287459 |
364 | D>G | No |
ClinGen ExAC |
|
| TCGA novel | 364 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1303078833 CA343863112 |
364 | D>H | No |
ClinGen gnomAD |
|
|
rs932107097 CA33391753 |
367 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs374764361 CA1287458 |
367 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 368 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs746842119 CA1287457 |
369 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343863051 rs1339209096 |
373 | E>G | No |
ClinGen gnomAD |
|
|
rs143613854 CA1287456 |
373 | E>K | No |
ClinGen ESP ExAC gnomAD |
|
|
CA343863027 rs1319264122 |
376 | Y>C | No |
ClinGen gnomAD |
|
|
rs749536749 CA343863022 |
377 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749536749 CA1287454 |
377 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA33391733 rs944940252 |
377 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1302883222 CA343863017 |
378 | V>M | No |
ClinGen TOPMed |
|
|
rs1558054181 CA343863008 |
379 | I>S | No |
ClinGen Ensembl |
|
|
CA1287452 rs756252783 |
383 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756252783 CA1287451 |
383 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1331388444 CA343862978 |
383 | N>Y | No |
ClinGen TOPMed |
|
|
CA343862957 rs1429342423 |
386 | P>R | No |
ClinGen gnomAD |
|
|
rs1205730867 CA343862953 |
387 | E>* | No |
ClinGen TOPMed |
|
|
CA1287450 rs750485298 |
387 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs770122236 CA1287433 |
388 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA343862911 rs1196250399 |
391 | T>I | No |
ClinGen gnomAD |
|
|
CA1287430 rs757899203 |
392 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343862910 rs1351376367 |
392 | D>N | No |
ClinGen TOPMed |
|
|
rs1211017175 CA343862893 |
394 | R>K | No |
ClinGen gnomAD |
|
|
rs778099486 CA1287428 |
396 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs752122207 CA1287429 |
396 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA1287427 rs563273025 |
398 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 398 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343862860 rs1314318308 |
399 | Q>* | No |
ClinGen TOPMed |
|
|
CA343862846 rs1231250606 |
401 | P>A | No |
ClinGen gnomAD |
|
|
CA1287426 rs752981854 |
401 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1558053119 RCV000736118 CA343862840 |
402 | L>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs759180112 CA1287424 |
407 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1324272567 CA343862803 |
407 | A>S | No |
ClinGen gnomAD |
|
|
CA1287425 rs759180112 |
407 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs910479366 CA33391024 |
409 | S>N | No |
ClinGen Ensembl |
|
|
CA343862776 rs1280271479 |
411 | Y>C | No |
ClinGen TOPMed |
|
|
CA343862779 rs1457593912 |
411 | Y>H | No |
ClinGen gnomAD |
|
|
rs1485047369 CA343862763 |
413 | L>V | No |
ClinGen TOPMed |
|
|
CA1287421 rs760109808 |
414 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA33391007 rs987167474 |
414 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
rs758797024 CA1287408 |
417 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA343862718 rs1486058714 |
418 | G>E | No |
ClinGen TOPMed |
|
|
rs753172672 CA343862709 |
419 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1208426032 CA343862704 |
420 | P>L | No |
ClinGen gnomAD |
|
|
CA1287405 rs755276877 |
421 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs753492325 CA1287404 |
422 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA1287401 rs150098169 |
423 | L>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1287402 rs372548911 |
423 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs767530443 CA1287400 |
424 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA343862655 rs1282317487 |
428 | T>A | No |
ClinGen gnomAD |
|
|
rs761656260 CA1287399 |
429 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA1287398 rs774264192 |
430 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1335781356 CA343862627 |
432 | N>S | No |
ClinGen gnomAD |
|
|
CA1287396 rs368296552 |
437 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1287397 rs368296552 |
437 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA33390743 rs750043400 |
442 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA343862552 rs1414923878 |
443 | F>S | No |
ClinGen TOPMed |
|
|
rs866692495 CA33390741 |
444 | A>V | No |
ClinGen Ensembl |
|
|
rs1422316324 CA343862536 |
446 | M>V | No |
ClinGen gnomAD |
|
|
rs771252507 CA1287394 |
450 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA1287393 rs747148669 |
450 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs916992018 CA33390728 |
451 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs916992018 CA33390729 |
451 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1447384593 CA343862492 |
453 | S>R | No |
ClinGen gnomAD |
|
| TCGA novel | 454 | H>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs146461491 CA1287392 |
454 | H>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1190420237 CA343862480 |
454 | H>R | No |
ClinGen gnomAD |
|
|
CA343862436 rs1203477213 |
458 | M>I | No |
ClinGen gnomAD |
|
| TCGA novel | 461 | F>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343862365 rs1395890700 |
468 | K>Q | No |
ClinGen gnomAD |
|
|
CA343862349 rs1402931602 |
470 | L>V | No |
ClinGen TOPMed |
|
|
CA33385180 rs574503857 |
471 | Y>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA343862329 rs1362485571 |
473 | L>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA1287362 rs755858237 |
474 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1423210821 CA343862312 |
476 | D>N | No |
ClinGen gnomAD |
|
|
rs1571366646 CA916356621 |
477 | K>NM* | No |
ClinGen Ensembl |
|
|
CA1287358 rs755176860 |
478 | E>* | No |
ClinGen ExAC |
|
|
CA343862284 rs1323637572 |
479 | D>E | No |
ClinGen TOPMed |
|
|
CA1287359 rs144035602 |
479 | D>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed |
|
|
rs144035602 CA1287357 |
479 | D>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed |
|
| TCGA novel | 480 | I>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1287356 rs756751600 |
480 | I>S | No |
ClinGen ExAC gnomAD |
|
|
CA343862282 rs1296418291 |
480 | I>V | No |
ClinGen gnomAD |
|
|
CA343862267 rs1246951408 |
482 | F>V | No |
ClinGen TOPMed |
|
|
rs1464279851 CA343862258 |
483 | D>G | No |
ClinGen gnomAD |
|
|
CA343862261 rs751088993 |
483 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287355 rs751088993 |
483 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751088993 CA343862260 |
483 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758402689 CA1287353 |
484 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs1243060105 CA343862248 |
485 | E>K | No |
ClinGen TOPMed |
|
|
CA1287352 rs752593272 |
488 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs866206530 CA33385165 |
489 | F>S | No |
ClinGen Ensembl |
|
|
CA343862202 rs1219324334 |
491 | T>K | No |
ClinGen gnomAD |
|
|
CA343862148 rs1185336665 |
499 | W>* | No |
ClinGen TOPMed |
|
|
rs764955648 CA1287351 |
499 | W>R | No |
ClinGen ExAC gnomAD |
|
|
rs1433522415 CA343862136 |
501 | S>C | No |
ClinGen gnomAD |
|
|
rs1289793324 CA343862132 |
502 | T>A | No |
ClinGen gnomAD |
|
|
rs1455574166 CA343862126 |
503 | T>A | No |
ClinGen gnomAD |
|
|
CA1287347 rs767728452 |
504 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287348 rs767728452 |
504 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287346 rs761931370 |
506 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287345 rs144835234 |
507 | I>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs144666645 CA1287344 |
507 | I>T | No |
ClinGen ESP ExAC TOPMed |
|
|
rs1186673090 CA343862089 |
509 | K>E | No |
ClinGen gnomAD |
|
|
CA343862085 rs1571366243 |
509 | K>R | No |
ClinGen Ensembl |
|
|
CA33385154 rs1041978444 |
510 | K>E | No |
ClinGen Ensembl |
|
|
rs763438017 CA1287343 |
510 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA1287342 rs200489181 |
511 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA343862064 rs1369656889 |
512 | T>R | No |
ClinGen gnomAD |
|
|
CA1287325 rs764176154 |
513 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA1287326 rs764176154 |
513 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs201214078 CA1287323 |
514 | S>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1287321 rs372810452 |
518 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs777046964 CA1287320 |
518 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343862007 rs1571364800 |
520 | D>H | No |
ClinGen Ensembl |
|
|
rs746669081 CA1287318 |
520 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA1287316 rs777500298 |
523 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs534471113 CA1287315 |
523 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1169641764 CA343861968 |
525 | D>G | No |
ClinGen gnomAD |
|
|
CA1287313 rs548484304 |
525 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs753644360 CA1287311 |
526 | W>G | No |
ClinGen ExAC gnomAD |
|
|
CA1287310 rs779886459 |
527 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA1287309 rs569209861 |
527 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1409341701 CA343861949 |
528 | C>Y | No |
ClinGen gnomAD |
|
|
rs764264125 CA1287307 |
529 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs148284518 CA1287306 |
530 | N>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1198145678 CA343861934 |
530 | N>K | No |
ClinGen gnomAD |
|
|
CA33385004 rs1020376693 |
532 | Q>E | No |
ClinGen Ensembl |
|
|
CA343861920 rs1558049072 |
532 | Q>H | No |
ClinGen Ensembl |
|
|
CA33385002 rs762396741 |
533 | I>N | No |
ClinGen Ensembl |
|
| TCGA novel | 534 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343861889 rs1265272265 |
537 | N>S | No |
ClinGen gnomAD |
|
|
rs766853402 CA1287302 |
540 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765728282 CA1287304 |
540 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760071452 CA1287303 |
540 | L>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs137866437 CA1287300 |
541 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1465161211 CA343861852 |
543 | Q>* | No |
ClinGen TOPMed |
|
|
CA343861843 rs1336485908 |
544 | S>N | No |
ClinGen gnomAD |
|
|
CA1287299 rs773019419 |
546 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA33384993 rs958690854 |
546 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1389961737 CA343861826 |
547 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1462832742 CA343861815 |
548 | P>R | No |
ClinGen gnomAD |
|
|
rs1158050095 CA343861783 |
553 | V>E | No |
ClinGen gnomAD |
|
|
rs373536420 CA1287297 |
553 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs373536420 CA33384990 |
553 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA33384987 rs199777596 |
554 | D>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1470301178 CA343861778 |
554 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA1287296 rs199777596 |
554 | D>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1196095780 CA343861771 |
555 | K>T | No |
ClinGen gnomAD |
|
|
rs532340082 CA1287295 |
556 | S>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs199936574 CA1287294 |
557 | C>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs779793137 CA33384983 |
560 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs779793137 CA1287293 |
560 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs745616085 CA1287291 |
561 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA1287292 rs373515341 |
561 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs369859478 CA1287290 |
562 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1287269 rs778961881 |
567 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343861681 rs1253649260 |
567 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
CA33384829 rs981305067 |
568 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA343861649 rs1258372477 |
571 | G>A | No |
ClinGen gnomAD |
|
|
CA1287268 rs755106982 |
572 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287267 rs753838363 |
573 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA1287266 rs140264427 |
574 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs140264427 CA343861635 |
574 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1282185973 CA343861626 |
575 | P>L | No |
ClinGen gnomAD |
|
|
CA343861629 rs1341281108 |
575 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA1287263 rs140549505 |
579 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1314279159 CA343861603 |
579 | R>S | No |
ClinGen gnomAD |
|
|
rs762017997 CA1287262 |
580 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287260 rs763608441 |
585 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs762575205 CA1287259 |
586 | P>R | No |
ClinGen ExAC |
|
| TCGA novel | 594 | K>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343861496 rs1161795345 |
594 | K>N | No |
ClinGen gnomAD |
|
|
CA343861492 rs1558047823 |
595 | M>L | No |
ClinGen Ensembl |
|
|
CA1287257 rs769777321 |
595 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs759480448 CA1287256 |
597 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA33384828 CA343861462 rs199800822 |
599 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1482119265 CA343861453 |
601 | H>D | No |
ClinGen gnomAD |
|
|
rs1205192399 CA343861403 |
608 | Q>* | No |
ClinGen gnomAD |
|
|
rs1439454308 CA343861377 |
611 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA33384825 rs371763731 |
613 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1287254 rs371763731 |
613 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1232478118 CA343861363 |
614 | I>V | No |
ClinGen gnomAD |
|
|
rs1318599287 CA343489037 |
617 | A>G | No |
ClinGen gnomAD |
|
|
CA343489032 rs1301893376 |
618 | S>T | No |
ClinGen gnomAD |
|
|
rs1372239446 CA343489023 |
619 | S>L | No |
ClinGen gnomAD |
|
|
rs745897591 CA1287228 |
619 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs757677014 CA1287226 |
620 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs368655971 CA1287227 |
620 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs147654929 CA1287224 |
621 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1287222 rs764817912 |
622 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764817912 CA1287221 |
622 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343488993 rs1368242828 |
624 | D>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 627 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 628 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343488968 rs1571358618 |
628 | F>V | No |
ClinGen Ensembl |
|
|
CA343488961 rs1158848316 |
629 | M>V | No |
ClinGen TOPMed |
|
|
rs1254705083 CA343488949 |
630 | Q>P | No |
ClinGen gnomAD |
|
|
rs370413532 CA1287217 |
632 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA343488936 rs1186485939 |
632 | M>V | No |
ClinGen gnomAD |
|
| TCGA novel | 634 | E>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 635 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1287216 rs773144981 |
641 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA33384646 rs761662825 |
644 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287215 rs767221845 |
644 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA1287213 rs775878167 |
646 | P>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 648 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA33384644 rs149304336 |
648 | R>G | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA1287211 rs745987472 |
648 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA33384643 rs867167038 |
649 | A>S | No |
ClinGen Ensembl |
|
|
CA33384642 rs989596016 |
650 | V>L | No |
ClinGen TOPMed |
|
|
CA1287210 rs776573337 |
651 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1558046242 CA343488783 |
655 | H>Y | No |
ClinGen Ensembl |
|
|
CA343488772 rs1244494971 |
656 | P>L | No |
ClinGen gnomAD |
|
|
rs1239868074 CA343488768 |
657 | F>Y | No |
ClinGen TOPMed |
|
| rs1173052284 | 658 | F>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343488750 rs1206307303 |
659 | G>V | No |
ClinGen gnomAD |
|
|
rs1279124953 CA343488740 |
661 | V>L | No |
ClinGen TOPMed |
|
|
rs778298177 CA1287207 |
662 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343488664 rs1482051483 |
673 | D>G | No |
ClinGen gnomAD |
|
|
CA1287204 rs778574973 |
673 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287203 rs754621630 |
676 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1486332230 CA343488643 |
676 | K>N | No |
ClinGen gnomAD |
|
|
rs201462809 CA343488641 |
677 | H>N | No |
ClinGen gnomAD |
|
|
CA33384641 rs201462809 |
677 | H>Y | No |
ClinGen gnomAD |
|
|
rs772301942 CA1287184 |
680 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1234128082 CA343488599 |
681 | R>K | No |
ClinGen gnomAD |
|
|
rs1234128082 CA343488598 |
681 | R>T | No |
ClinGen gnomAD |
|
|
CA1287182 rs779717097 |
684 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287183 rs748898581 |
684 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA343488572 rs1571356211 |
685 | A>G | No |
ClinGen Ensembl |
|
|
CA343488548 rs1571356202 |
688 | K>N | No |
ClinGen Ensembl |
|
|
CA1287181 rs373286484 |
691 | N>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs373286484 CA1287180 |
691 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1558045150 CA343488525 |
692 | G>D | No |
ClinGen Ensembl |
|
|
CA343488527 rs1397147870 |
692 | G>S | No |
ClinGen gnomAD |
|
|
CA343488517 rs1299754034 |
693 | C>Y | No |
ClinGen gnomAD |
|
|
CA1287179 rs781321674 |
694 | S>* | No |
ClinGen ExAC |
|
|
rs757257842 CA1287177 |
696 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs751462656 CA1287176 |
697 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs762765199 CA343488444 |
704 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762765199 CA1287174 |
704 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs139559842 CA1287171 |
707 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1287172 rs139559842 |
707 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1287170 rs773335787 |
710 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA343488410 rs1272936158 |
710 | Q>R | No |
ClinGen gnomAD |
|
|
rs772625342 CA1287169 |
713 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
CA1287168 rs762320203 |
714 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs774774173 CA1287167 |
719 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA343488338 rs1336352553 |
720 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA1287166 rs137886195 |
721 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs749617259 CA343488332 |
721 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs749617259 CA1287165 |
721 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA343488324 rs1062994 |
722 | N>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1370042612 CA343488326 |
722 | N>S | No |
ClinGen gnomAD |
|
|
rs1315670517 CA343488322 |
723 | I>L | No |
ClinGen TOPMed |
|
|
CA1287163 rs370728917 |
724 | Q>* | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1462783956 CA343488296 |
726 | A>V | No |
ClinGen gnomAD |
|
|
CA1287162 rs745439090 |
728 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs553481965 CA1287161 |
729 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA1287160 rs756773509 |
731 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA1287159 rs751573986 |
732 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA1287158 rs777800596 |
734 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs148232633 CA1287140 |
737 | N>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1287138 rs374997686 |
739 | G>R | No |
ClinGen ESP ExAC gnomAD |
|
|
CA343488199 rs1571350126 |
740 | S>G | No |
ClinGen Ensembl |
|
|
CA343488197 rs1337275090 |
740 | S>N | No |
ClinGen gnomAD |
|
| TCGA novel | 742 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs980881430 CA33384114 |
744 | T>I | No |
ClinGen TOPMed |
|
|
CA343488154 rs1435007545 |
746 | P>H | No |
ClinGen gnomAD |
|
|
rs78444298 CA1287137 |
746 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA343488126 rs1571350033 |
750 | M>I | No |
ClinGen Ensembl |
|
|
CA1287134 rs750675862 |
750 | M>R | No |
ClinGen ExAC gnomAD |
|
|
rs1252435624 CA1287132 |
752 | G>C | No |
ClinGen TOPMed |
|
|
rs767678243 CA1287131 |
752 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA343488112 rs751608954 |
753 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA1287129 rs751608954 |
753 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs763506393 CA1287127 |
756 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287128 rs764578317 |
756 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA343488086 rs1249149598 |
757 | T>A | No |
ClinGen TOPMed |
|
|
rs147742369 CA343488063 |
760 | I>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1287126 rs147742369 |
760 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1287124 rs765642179 |
768 | F>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765642179 CA343488005 |
768 | F>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287123 rs759927115 |
770 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA1287121 rs770673753 |
773 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs770673753 CA343487970 |
773 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA1287122 rs553199268 |
773 | S>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs369748310 CA1287120 |
774 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs771424868 CA1287118 |
775 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA33384113 rs1019032972 |
777 | D>G | No |
ClinGen Ensembl |
|
|
CA1287113 rs756618611 |
780 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749061615 CA1287114 |
780 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1282904731 CA343487925 |
781 | E>Q | No |
ClinGen TOPMed |
|
|
rs1026370585 CA33384112 |
782 | Y>F | No |
ClinGen TOPMed |
|
|
CA1287110 rs764250531 |
785 | V>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 789 | L>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1307484943 CA343487858 |
791 | D>N | No |
ClinGen TOPMed |
|
|
CA1287109 rs376120487 |
792 | K>E | No |
ClinGen ESP ExAC gnomAD |
|
|
CA1287107 rs765636238 |
794 | K>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1232235846 CA343487826 |
795 | D>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA1287104 rs754246948 |
796 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1447859530 CA343487676 |
797 | D>A | No |
ClinGen TOPMed |
|
| TCGA novel | 798 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA33383265 rs868738758 |
798 | P>L | No |
ClinGen Ensembl |
|
|
rs761426910 CA1287078 |
798 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs954789563 CA33383264 |
800 | M>T | No |
ClinGen Ensembl |
|
|
rs1558037370 CA343487644 |
802 | N>D | No |
ClinGen Ensembl |
|
|
rs773731528 CA1287077 |
802 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343487634 rs1466457003 |
803 | E>A | No |
ClinGen gnomAD |
|
|
CA343487615 rs9425634 |
805 | Q>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA343487594 rs1427657261 |
809 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
RCV000736119 rs765435034 CA1287075 |
811 | D>Y | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs1195317191 CA343487572 |
812 | S>A | No |
ClinGen gnomAD |
|
|
CA1287074 rs775342844 |
812 | S>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA1287073 rs200970965 |
813 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1015863066 CA33383263 |
815 | Q>H | No |
ClinGen Ensembl |
|
|
CA343487545 rs1210861159 |
816 | S>G | No |
ClinGen gnomAD |
|
|
rs551639908 CA33383262 |
819 | Q>H | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs745604474 CA1287072 |
819 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
VAR_059306 rs9425343 CA1287071 |
820 | I>S | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs149252365 CA1287069 |
822 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1558037277 CA343487501 |
823 | S>G | No |
ClinGen Ensembl |
|
|
rs1279146093 CA343487488 |
824 | S>F | No |
ClinGen gnomAD |
|
|
CA343487467 rs1353684514 |
827 | V>A | No |
ClinGen gnomAD |
|
|
rs1292724839 CA343487461 |
828 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs755039079 CA1287066 |
829 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA1287065 rs559558778 |
831 | D>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1016111008 CA33383261 |
832 | Q>E | No |
ClinGen TOPMed |
|
|
CA343487427 rs1244964573 |
833 | E>A | No |
ClinGen TOPMed |
|
|
rs1244964573 CA343487426 |
833 | E>G | No |
ClinGen TOPMed |
|
|
rs1461302070 CA343487431 |
833 | E>K | No |
ClinGen gnomAD |
|
|
rs756595797 CA1287063 |
837 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs750723792 CA1287062 |
838 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs767268568 CA1287061 |
839 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767268568 CA33383260 |
839 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1287060 rs756848005 |
843 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1352720434 CA343487364 |
843 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA343487351 rs1258891195 |
845 | E>K | No |
ClinGen gnomAD |
|
| TCGA novel | 847 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1413739290 CA343487325 |
849 | L>V | No |
ClinGen Ensembl |
|
|
rs762413955 CA1287057 |
851 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA1287054 rs765123596 |
852 | M>R | No |
ClinGen ExAC gnomAD |
|
|
CA1287056 rs765123596 |
852 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs1272734962 CA343487301 |
853 | D>N | No |
ClinGen gnomAD |
|
|
CA33383257 CA33383258 rs1046673277 |
854 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
CA1287053 rs759438611 |
855 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA1287052 rs776272651 |
856 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343487274 rs1390724093 |
857 | S>I | No |
ClinGen gnomAD |
|
|
rs1390724093 CA343487272 |
857 | S>N | No |
ClinGen gnomAD |
|
|
rs1377432314 CA343487271 |
857 | S>R | No |
ClinGen gnomAD |
|
|
rs1461199778 CA343487257 |
859 | S>F | No |
ClinGen TOPMed |
|
|
rs748320398 CA343487255 |
860 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748320398 CA1287050 |
860 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774673502 CA1287049 |
862 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs768878712 CA1287048 |
863 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA1287047 rs749356122 |
864 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA1287045 rs150541662 |
864 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1287046 rs150541662 |
864 | T>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1287044 rs746303687 |
866 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs1158665042 CA343487208 |
868 | T>A | No |
ClinGen TOPMed |
|
|
rs1208212426 CA343487204 |
868 | T>I | No |
ClinGen gnomAD |
|
| TCGA novel | 869 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1410504641 CA343487199 |
869 | E>G | No |
ClinGen TOPMed |
|
|
CA1287043 rs781425413 |
871 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA343487180 rs267598231 |
872 | E>* | No |
ClinGen gnomAD |
|
|
CA33383254 rs536664039 |
872 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA33383255 rs267598231 |
872 | E>K | No |
ClinGen gnomAD |
|
|
CA343487161 rs1571337845 |
875 | N>D | No |
ClinGen Ensembl |
|
|
CA343487144 rs1266954431 |
877 | N>S | No |
ClinGen gnomAD |
|
|
rs1358617907 CA343487139 |
878 | G>R | No |
ClinGen gnomAD |
|
| TCGA novel | 879 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1053759294 CA33383253 |
879 | E>Q | No |
ClinGen gnomAD |
|
|
CA1287039 rs373699792 |
880 | C>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 880 | C>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs373699792 CA1287038 |
880 | C>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA343487120 rs1311286980 |
881 | T>A | No |
ClinGen gnomAD |
|
|
rs1331911798 CA343487100 |
884 | D>N | No |
ClinGen TOPMed |
|
|
rs1337503041 CA343487089 |
885 | N>T | No |
ClinGen TOPMed |
|
|
rs1239624068 CA343487068 |
888 | Q>* | No |
ClinGen TOPMed |
|
|
CA343487060 rs1231826486 |
889 | E>K | No |
ClinGen gnomAD |
|
|
rs1225929449 CA343487041 |
891 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA343487046 rs1369962195 |
891 | S>T | No |
ClinGen gnomAD |
|
|
CA33383252 rs1052146593 |
893 | T>I | No |
ClinGen TOPMed |
|
|
rs1388118041 CA343487000 |
897 | S>C | No |
ClinGen gnomAD |
|
|
rs759402315 CA1287036 |
898 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1253039785 CA343486957 |
903 | W>* | No |
ClinGen TOPMed |
|
|
CA343486960 rs1571337690 |
903 | W>G | No |
ClinGen Ensembl |
|
|
CA1287034 rs141657255 |
903 | W>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs766116854 CA1287033 |
904 | G>C | No |
ClinGen ExAC gnomAD |
|
|
rs1571337655 CA343486952 |
904 | G>D | No |
ClinGen Ensembl |
|
|
CA343486954 rs766116854 |
904 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs774763271 CA1287031 |
905 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA1287030 rs768968700 |
906 | K>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 906 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1287028 rs201554031 |
907 | V>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs201554031 CA1287029 |
907 | V>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA33383251 rs923981838 |
909 | P>L | No |
ClinGen TOPMed |
|
|
rs746368202 CA1287026 |
910 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA33383250 rs978579078 |
911 | D>G | No |
ClinGen Ensembl |
|
|
CA343486904 rs1215995449 |
912 | S>P | No |
ClinGen gnomAD |
|
|
CA343486897 rs1488626159 |
913 | I>L | No |
ClinGen gnomAD |
|
|
rs747356370 CA1287023 |
916 | D>A | No |
ClinGen ExAC gnomAD |
|
|
CA1287024 rs757588994 |
916 | D>H | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 916 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343486858 rs1375913094 |
918 | N>K | No |
ClinGen gnomAD |
|
|
rs1177937304 CA343486848 |
920 | D>N | No |
ClinGen TOPMed |
|
|
rs777464237 CA1287022 |
921 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs948245150 CA33383248 |
922 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs948245150 CA33383247 |
922 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA33383246 rs146851109 |
923 | A>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs758045939 CA1287021 |
924 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1400089992 CA343486816 |
925 | E>K | No |
ClinGen gnomAD |
|
|
rs778411233 CA1287019 |
927 | M>L | No |
ClinGen ExAC gnomAD |
|
|
CA1287020 rs778411233 |
927 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA343486776 rs1391902728 |
930 | D>N | No |
ClinGen TOPMed |
|
|
rs753752111 CA1287017 |
933 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
1 associated diseases with Q9BZQ6
[MIM: 619493]: Congenital disorder of glycosylation 2V (CDG2V)
A form of congenital disorder of glycosylation, a genetically heterogeneous group of multisystem disorders caused by a defect in glycoprotein biosynthesis and characterized by under-glycosylated serum glycoproteins. Congenital disorders of glycosylation result in a wide variety of clinical features, such as defects in the nervous system development, psychomotor retardation, dysmorphic features, hypotonia, coagulation disorders, and immunodeficiency. The broad spectrum of features reflects the critical role of N-glycoproteins during embryonic development, differentiation, and maintenance of cell functions. CDG2V is an autosomal recessive form characterized by neurodevelopmental delay and variable facial dysmorphic features. {ECO:0000269|PubMed:34143952}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A form of congenital disorder of glycosylation, a genetically heterogeneous group of multisystem disorders caused by a defect in glycoprotein biosynthesis and characterized by under-glycosylated serum glycoproteins. Congenital disorders of glycosylation result in a wide variety of clinical features, such as defects in the nervous system development, psychomotor retardation, dysmorphic features, hypotonia, coagulation disorders, and immunodeficiency. The broad spectrum of features reflects the critical role of N-glycoproteins during embryonic development, differentiation, and maintenance of cell functions. CDG2V is an autosomal recessive form characterized by neurodevelopmental delay and variable facial dysmorphic features. {ECO:0000269|PubMed:34143952}. Note=The disease is caused by variants affecting the gene represented in this entry.
3 regional properties for Q9BZQ6
Functions
| Description | ||
|---|---|---|
| EC Number | 3.2.1.113 | Glycosidases, ie enzymes hydrolyzing O- and S-glycosyl compounds |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). |
| endoplasmic reticulum lumen | The volume enclosed by the membranes of the endoplasmic reticulum. |
| endoplasmic reticulum quality control compartment | A subcompartment of the endoplasmic reticulum in which proteins with improper or incorrect folding accumulate. Enzymes in this compartment direct proteins with major folding problems to translocation to the cytosol and degradation, and proteins with minor folding problems to the ER, to interact with chaperon proteins. |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| alpha-mannosidase activity | Catalysis of the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides. |
| calcium ion binding | Binding to a calcium ion (Ca2+). |
| mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | Catalysis of the hydrolysis of the terminal (1->2)-linked alpha-D-mannose residues in an oligo-mannose oligosaccharide. |
5 GO annotations of biological process
| Name | Definition |
|---|---|
| carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. |
| endoplasmic reticulum mannose trimming | Any protein alpha-1,2-demannosylation that takes place in the endoplasmic reticulum quality control compartment (ERQC). |
| mannose trimming involved in glycoprotein ERAD pathway | The removal of one or more alpha 1,2-linked mannose residues from a mannosylated protein that occurs as part of glycoprotein ER-associated glycoprotein degradation (gpERAD). |
| protein glycosylation | A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins. |
| response to unfolded protein | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSEAGGRGCG | SPVPQRARWR | LVAATAAFCL | VSATSVWTAG | AEPMSREEKQ | KLGNQVLEMF |
| 70 | 80 | 90 | 100 | 110 | 120 |
| DHAYGNYMEH | AYPADELMPL | TCRGRVRGQE | PSRGDVDDAL | GKFSLTLIDS | LDTLVVLNKT |
| 130 | 140 | 150 | 160 | 170 | 180 |
| KEFEDAVRKV | LRDVNLDNDV | VVSVFETNIR | VLGGLLGGHS | LAIMLKEKGE | YMQWYNDELL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| QMAKQLGYKL | LPAFNTTSGL | PYPRINLKFG | IRKPEARTGT | ETDTCTACAG | TLILEFAALS |
| 250 | 260 | 270 | 280 | 290 | 300 |
| RFTGATIFEE | YARKALDFLW | EKRQRSSNLV | GVTINIHTGD | WVRKDSGVGA | GIDSYYEYLL |
| 310 | 320 | 330 | 340 | 350 | 360 |
| KAYVLLGDDS | FLERFNTHYD | AIMRYISQPP | LLLDVHIHKP | MLNARTWMDA | LLAFFPGLQV |
| 370 | 380 | 390 | 400 | 410 | 420 |
| LKGDIRPAIE | THEMLYQVIK | KHNFLPEAFT | TDFRVHWAQH | PLRPEFAEST | YFLYKATGDP |
| 430 | 440 | 450 | 460 | 470 | 480 |
| YYLEVGKTLI | ENLNKYARVP | CGFAAMKDVR | TGSHEDRMDS | FFLAEMFKYL | YLLFADKEDI |
| 490 | 500 | 510 | 520 | 530 | 540 |
| IFDIEDYIFT | TEAHLLPLWL | STTNQSISKK | NTTSEYTELD | DSNFDWTCPN | TQILFPNDPL |
| 550 | 560 | 570 | 580 | 590 | 600 |
| YAQSIREPLK | NVVDKSCPRG | IIRVEESFRS | GAKPPLRARD | FMATNPEHLE | ILKKMGVSLI |
| 610 | 620 | 630 | 640 | 650 | 660 |
| HLKDGRVQLV | QHAIQAASSI | DAEDGLRFMQ | EMIELSSQQQ | KEQQLPPRAV | QIVSHPFFGR |
| 670 | 680 | 690 | 700 | 710 | 720 |
| VVLTAGPAQF | GLDLSKHKET | RGFVASSKPS | NGCSELTNPE | AVMGKIALIQ | RGQCMFAEKA |
| 730 | 740 | 750 | 760 | 770 | 780 |
| RNIQNAGAIG | GIVIDDNEGS | SSDTAPLFQM | AGDGKDTDDI | KIPMLFLFSK | EGSIILDAIR |
| 790 | 800 | 810 | 820 | 830 | 840 |
| EYEEVEVLLS | DKAKDRDPEM | ENEEQPSSEN | DSQNQSGEQI | SSSSQEVDLV | DQESSEENSL |
| 850 | 860 | 870 | 880 | 890 | 900 |
| NSHPESLSLA | DMDNAASISP | SEQTSNPTEN | HETTNLNGEC | TDLDNQLQEQ | SETEEDSNPN |
| 910 | 920 | 930 | |||
| VSWGKKVQPI | DSILADWNED | IEAFEMMEKD | EL |