Q9BYC2
Gene name |
OXCT2 (FKSG25) |
Protein name |
Succinyl-CoA:3-ketoacid coenzyme A transferase 2, mitochondrial |
Names |
3-oxoacid CoA-transferase 2A, Testis-specific succinyl-CoA:3-oxoacid CoA-transferase, SCOT-t |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:64064 |
EC number |
2.8.3.5: CoA-transferases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9BYC2
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9BYC2-F1 | Predicted | AlphaFoldDB |
463 variants for Q9BYC2
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA339832378 rs1461927645 |
3 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA339832373 rs1265280065 |
3 | A>V | No |
ClinGen gnomAD |
|
|
CA339832359 rs1279939995 |
6 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1569825149 CA339832350 |
8 | A>P | No |
ClinGen Ensembl |
|
|
CA339832339 rs1338661536 |
10 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs766449279 CA339832326 CA787700 |
12 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339832320 rs1452781822 |
13 | R>C | No |
ClinGen gnomAD |
|
| TCGA novel | 13 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1407837243 CA339832318 |
13 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
CA339832314 rs1318200116 |
14 | G>W | No |
ClinGen gnomAD |
|
|
CA339832300 rs1384615055 |
16 | P>R | No |
ClinGen gnomAD |
|
|
CA339832302 rs1233962449 |
16 | P>S | No |
ClinGen TOPMed |
|
| TCGA novel | 20 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA339832274 rs1183036276 |
21 | G>R | No |
ClinGen gnomAD |
|
|
rs765654788 CA787697 |
23 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA20979199 rs922338899 |
23 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA339832248 rs1446644257 |
25 | S>F | No |
ClinGen gnomAD |
|
|
CA787696 rs762278425 |
26 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1354128439 CA339832228 |
28 | C>* | No |
ClinGen gnomAD |
|
|
rs1246054179 CA339832224 |
29 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
rs564759495 CA787694 |
29 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs564759495 CA787693 |
29 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA339832220 rs1384286253 |
30 | R>C | No |
ClinGen gnomAD |
|
|
CA339832219 rs1294767970 |
30 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA339832222 rs1384286253 |
30 | R>S | No |
ClinGen gnomAD |
|
|
CA339832190 rs1326677522 |
33 | A>G | No |
ClinGen gnomAD |
|
|
rs1429539839 CA339832197 |
33 | A>P | No |
ClinGen gnomAD |
|
|
CA339832194 rs1429539839 |
33 | A>T | No |
ClinGen gnomAD |
|
|
rs1465990194 CA339832177 |
34 | T>S | No |
ClinGen TOPMed |
|
|
rs1207251299 CA339832165 |
35 | S>N | No |
ClinGen TOPMed |
|
|
rs1477299851 CA339832147 |
36 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA339832153 rs1319369410 |
36 | P>S | No |
ClinGen gnomAD |
|
|
rs1402852431 CA339832141 |
37 | R>Q | No |
ClinGen gnomAD |
|
|
CA339832143 rs1243954596 |
37 | R>W | No |
ClinGen gnomAD |
|
|
rs2636342 CA20979184 |
38 | L>P | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs915168621 CA20979183 |
39 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
CA339832100 rs1464657885 |
41 | K>Q | No |
ClinGen gnomAD |
|
|
CA339832087 rs1387096824 |
42 | F>L | No |
ClinGen gnomAD |
|
|
rs770622952 CA787691 |
44 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs774090598 CA787692 |
44 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs748803196 CA787690 |
45 | D>A | No |
ClinGen ExAC gnomAD |
|
|
rs777810352 CA339832015 |
46 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777810352 CA339832018 |
46 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA787689 rs777810352 |
46 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339831998 rs1223043990 |
48 | E>* | No |
ClinGen gnomAD |
|
| TCGA novel | 48 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA339832001 rs1223043990 |
48 | E>K | No |
ClinGen gnomAD |
|
|
CA339831992 rs1384022096 |
48 | E>V | No |
ClinGen TOPMed |
|
|
rs1361539283 CA339831971 |
49 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
rs769600331 CA787688 CA339831982 |
49 | M>L | No |
ClinGen ExAC TOPMed |
|
|
CA787687 rs748071943 |
53 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339831909 rs1339626942 |
54 | S>F | No |
ClinGen gnomAD |
|
|
CA339831907 rs1271643485 |
55 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1330770662 CA339831873 |
57 | A>E | No |
ClinGen TOPMed |
|
|
CA339831863 rs531385673 |
58 | T>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs531385673 CA787683 |
58 | T>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 59 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1368027709 CA339831841 |
60 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1210839136 CA339831813 |
62 | G>R | No |
ClinGen TOPMed |
|
|
rs1490006577 CA339831778 |
64 | F>C | No |
ClinGen TOPMed |
|
|
CA339831786 rs1218625089 |
64 | F>L | No |
ClinGen gnomAD |
|
| TCGA novel | 65 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA339831735 rs1412877130 |
68 | G>R | No |
ClinGen TOPMed |
|
| TCGA novel | 71 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1169813039 CA339831696 |
71 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1428286784 CA339831643 |
74 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA339831634 rs1199907278 |
75 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs765821949 CA339831585 |
80 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA787680 rs765821949 |
80 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs1203207366 CA339831582 |
81 | R>G | No |
ClinGen gnomAD |
|
|
rs762247066 CA787679 |
82 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA339831557 rs1322436849 |
84 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA339831563 rs1217047888 |
84 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
rs970824511 CA20979102 |
87 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA20979097 rs970824511 |
87 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA339831512 rs1347932734 |
89 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA339831471 rs1297020376 |
91 | N>S | No |
ClinGen gnomAD |
|
|
rs1442134489 CA339831462 |
92 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1355120329 CA339831445 |
93 | G>D | No |
ClinGen gnomAD |
|
|
rs1331009198 CA339831440 |
94 | V>M | No |
ClinGen gnomAD |
|
|
CA20979096 rs1012257834 |
95 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1428914933 CA339831415 |
96 | D>Y | No |
ClinGen gnomAD |
|
|
CA339831369 rs1176497399 |
100 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA339831235 rs1234075527 |
110 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA339831242 rs1448939215 |
110 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1297116273 CA339831219 |
111 | I>M | No |
ClinGen TOPMed |
|
|
rs1201254569 CA339831155 |
115 | Y>N | No |
ClinGen gnomAD |
|
|
CA339831104 rs1397483750 |
118 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1317571478 CA339831034 |
121 | L>Q | No |
ClinGen TOPMed |
|
|
rs963669157 CA20979085 |
122 | C>Y | No |
ClinGen TOPMed |
|
|
CA339830947 rs1204695262 |
125 | Q>* | No |
ClinGen gnomAD |
|
|
CA339830910 rs1305315212 |
126 | Y>* | No |
ClinGen gnomAD |
|
|
CA339830925 rs1314248586 |
126 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
CA339830900 rs1223677506 |
127 | L>V | No |
ClinGen gnomAD |
|
|
CA339830873 rs1275895040 |
128 | A>V | No |
ClinGen TOPMed |
|
|
rs1281328623 CA339830815 |
132 | E>A | No |
ClinGen gnomAD |
|
|
CA339830823 rs1374718074 |
132 | E>K | No |
ClinGen gnomAD |
|
|
rs1450590194 CA339830807 |
133 | L>V | No |
ClinGen gnomAD |
|
|
CA339830743 rs1185679431 |
136 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
CA339830703 rs1337710216 |
137 | P>L | No |
ClinGen gnomAD |
|
|
CA339830692 rs1471088785 |
138 | Q>* | No |
ClinGen gnomAD |
|
|
CA339830685 rs1343152152 |
138 | Q>P | No |
ClinGen gnomAD |
|
|
rs1158146351 CA339830662 |
139 | G>C | No |
ClinGen gnomAD |
|
|
rs1256411434 CA339830659 |
139 | G>D | No |
ClinGen gnomAD |
|
|
CA339830617 rs1209160197 |
141 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1410137674 CA339830615 |
142 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA339830573 rs1310430658 |
144 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1443540570 CA339830551 |
145 | I>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1243230358 CA339830533 |
146 | R>C | No |
ClinGen gnomAD |
|
|
rs1421494895 CA339830527 |
146 | R>H | No |
ClinGen TOPMed |
|
|
CA339830503 rs1228972015 |
147 | A>V | No |
ClinGen gnomAD |
|
|
rs528920389 CA339830490 |
148 | G>A | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA20979046 rs528920389 |
148 | G>E | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs1484706463 CA339830486 |
149 | G>S | No |
ClinGen gnomAD |
|
|
rs1334229975 CA339830477 |
150 | A>S | No |
ClinGen TOPMed |
|
|
CA339830438 rs1569822851 |
152 | V>G | No |
ClinGen Ensembl |
|
|
rs1259276578 CA339830425 |
153 | P>L | No |
ClinGen gnomAD |
|
|
rs1016535644 CA20979040 |
153 | P>S | No |
ClinGen TOPMed |
|
|
CA787674 rs770677897 |
154 | A>T | No |
ClinGen ExAC |
|
|
CA339830341 rs1318012325 |
158 | P>L | No |
ClinGen gnomAD |
|
|
CA20979023 rs1005518194 |
158 | P>S | No |
ClinGen TOPMed |
|
|
CA339830304 rs1243859849 |
160 | G>D | No |
ClinGen gnomAD |
|
|
rs1288862227 CA339830317 |
160 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1382055282 CA339830279 |
161 | Y>C | No |
ClinGen gnomAD |
|
|
CA339830234 rs1213371228 |
163 | T>I | No |
ClinGen TOPMed |
|
|
CA339830151 CA20979014 rs886681041 |
167 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1294709738 CA339830172 |
167 | E>K | No |
ClinGen gnomAD |
|
|
rs1312803048 CA339830148 |
168 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1454749394 CA339830121 |
169 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs202241813 CA20979000 |
172 | I>F | No |
ClinGen 1000Genomes gnomAD |
|
|
rs369859195 CA787673 |
173 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339830051 rs1346891572 |
174 | Y>F | No |
ClinGen gnomAD |
|
|
rs772621954 CA787672 |
175 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA339830041 rs1461047056 |
176 | P>S | No |
ClinGen TOPMed |
|
|
CA339830016 rs1164957086 |
179 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1474366961 CA339830019 |
179 | H>R | No |
ClinGen TOPMed |
|
| TCGA novel | 181 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1425813129 CA339830005 |
181 | A>V | No |
ClinGen TOPMed |
|
|
CA339830003 rs1426342077 |
182 | L>V | No |
ClinGen gnomAD |
|
|
rs1260651072 CA339829990 |
183 | M>I | No |
ClinGen gnomAD |
|
| TCGA novel | 183 | M>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA787669 rs781045390 |
186 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs781045390 CA339829973 |
186 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs746799207 CA787668 |
187 | R>* | No |
ClinGen ExAC gnomAD |
|
|
rs746799207 CA787667 |
187 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA339829944 rs1569822304 |
189 | V>G | No |
ClinGen Ensembl |
|
|
CA339829924 rs1169817281 |
191 | E>K | No |
ClinGen gnomAD |
|
|
CA339829908 rs1569822253 |
192 | F>V | No |
ClinGen Ensembl |
|
|
rs1319359418 CA339829880 |
194 | G>S | No |
ClinGen TOPMed |
|
|
CA339829865 rs1165511309 |
195 | D>N | No |
ClinGen gnomAD |
|
|
CA787665 rs758595402 |
196 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA787664 rs149732909 |
197 | F>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA787662 rs757305150 |
199 | L>* | No |
ClinGen ExAC gnomAD |
|
|
rs757305150 CA339829813 |
199 | L>S | No |
ClinGen ExAC gnomAD |
|
|
rs754360890 CA787661 |
201 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA339829781 rs1383003886 |
201 | R>P | No |
ClinGen gnomAD |
|
|
rs756587866 CA787659 |
202 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs139638488 CA787658 |
203 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA787656 rs762549352 |
205 | A>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 208 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs764664008 CA787654 |
209 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1569821948 CA339829654 |
211 | K>N | No |
ClinGen Ensembl |
|
|
CA787652 rs761369477 |
211 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1426183486 CA339829640 |
212 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1490323658 CA339829629 |
213 | W>* | No |
ClinGen gnomAD |
|
|
CA787651 rs776613937 |
213 | W>R | No |
ClinGen ExAC gnomAD |
|
|
CA787649 rs559212789 |
216 | D>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs768546307 CA787650 |
216 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775283847 CA339829585 |
217 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA339829580 rs377398400 |
217 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA787647 rs377398400 |
217 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs775283847 CA787648 |
217 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs746081956 CA787645 |
221 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA787644 rs779183881 |
223 | F>I | No |
ClinGen ExAC gnomAD |
|
|
rs779183881 CA339829515 |
223 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA787643 rs757347221 |
224 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs141724777 CA787641 |
226 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs756714289 CA339829453 COSM1342575 |
228 | R>C | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs756714289 CA787640 |
228 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1403508730 CA339829441 |
229 | N>D | No |
ClinGen gnomAD |
|
|
rs142051286 CA787638 |
229 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA339829386 rs1226215860 |
233 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1039825231 CA20978824 |
234 | M>V | No |
ClinGen TOPMed |
|
|
CA339829361 rs1301334905 |
235 | C>R | No |
ClinGen TOPMed |
|
|
rs1569821551 CA339829353 |
235 | C>Y | No |
ClinGen Ensembl |
|
|
rs750097865 CA787636 |
237 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138789145 CA787633 |
239 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs761267697 CA787634 |
239 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs763544435 CA787632 |
240 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs145014048 CA787631 |
241 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA339829243 rs1369242607 |
244 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA787629 rs771776541 |
245 | V>G | No |
ClinGen ExAC gnomAD |
|
|
TCGA novel rs745672114 CA787628 |
247 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC gnomAD NCI-TCGA |
|
rs1380118494 CA339829182 |
248 | I>M | No |
ClinGen gnomAD |
|
|
rs774478441 CA787627 |
248 | I>N | No |
ClinGen ExAC gnomAD |
|
|
rs774478441 CA339829184 |
248 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA787626 rs771163941 |
249 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA20978785 rs7542609 VAR_059134 |
250 | E>D | No |
ClinGen UniProt Ensembl dbSNP |
|
|
CA339829152 rs1569821232 |
251 | V>G | No |
ClinGen Ensembl |
|
|
CA20978784 rs981981449 |
251 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1557480400 CA339829138 |
252 | G>A | No |
ClinGen Ensembl |
|
|
CA339829126 rs1569821116 |
253 | A>D | No |
ClinGen Ensembl |
|
|
rs1569821116 CA339829124 |
253 | A>G | No |
ClinGen Ensembl |
|
|
rs748682366 CA787622 |
253 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1363766799 CA339829111 |
254 | F>S | No |
ClinGen gnomAD |
|
|
rs991289372 CA20978716 |
255 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA339829083 rs755361091 |
256 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA787619 rs755361091 |
256 | P>Q | No |
ClinGen ExAC gnomAD |
|
| rs756942160 | 256 | P>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1441682754 CA339829088 |
256 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA339829091 rs1441682754 |
256 | P>T | No |
ClinGen TOPMed gnomAD |
|
| rs756942160 | 257 | E>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA787615 rs370989913 |
258 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA787612 rs760120009 |
260 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs753447378 CA787613 |
260 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA339829042 COSM1219027 rs1386288246 |
261 | V>I | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA339829030 rs1356572967 |
263 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
CA787610 rs752698927 |
263 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759300221 CA339829018 |
264 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA787609 rs767458770 |
264 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774219800 CA787607 |
265 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA787606 COSM3930778 rs112946539 |
267 | D>G | urinary_tract [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs763275934 CA787605 |
268 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs1159718365 COSM3790011 CA339828990 |
269 | V>M | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA787603 rs770060692 |
270 | I>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 271 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 273 | Q>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 274 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA787602 rs781586596 |
275 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA787600 rs374774506 |
276 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1239476813 CA339828942 |
276 | E>Q | No |
ClinGen gnomAD |
|
|
rs747422843 CA787599 |
277 | K>E | No |
ClinGen ExAC |
|
|
rs376756925 CA787598 |
277 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA339828928 rs1262186887 |
278 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs553851060 CA787597 |
279 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs753502658 CA787596 |
280 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1246126994 CA339828910 |
281 | R>C | No |
ClinGen gnomAD |
|
|
CA339828894 rs1569820491 |
283 | T>M | No |
ClinGen Ensembl |
|
|
rs230321 VAR_059135 CA787593 |
285 | L>R | No |
ClinGen UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs1326144736 CA339828881 |
286 | K>E | No |
ClinGen gnomAD |
|
|
rs1299223339 CA339828874 |
287 | E>K | No |
ClinGen gnomAD |
|
| TCGA novel | 289 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA787592 rs752230574 |
290 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs759552796 CA787590 |
292 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs759552796 CA787591 |
292 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA787589 rs751388707 |
294 | K>M | No |
ClinGen ExAC gnomAD |
|
|
rs762832433 CA787587 |
295 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs766213944 CA787588 |
295 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA339828785 rs1424009352 |
300 | T>A | No |
ClinGen gnomAD |
|
|
rs1195637652 CA339828781 |
300 | T>R | No |
ClinGen gnomAD |
|
|
rs776791148 CA339828779 |
301 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776791148 CA787584 |
301 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1268177212 CA339828776 |
301 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1268177212 CA339828778 |
301 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1268177212 CA339828777 |
301 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
rs776791148 CA787583 |
301 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768577604 CA787582 |
302 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA787581 rs747554507 |
304 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775801904 CA787580 |
305 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200262941 CA787579 |
305 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200262941 CA339828753 |
305 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746200222 CA787578 |
306 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs746200222 CA339828752 |
306 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA787577 rs368645697 |
307 | A>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 307 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1450120285 CA339828739 |
308 | L>P | No |
ClinGen TOPMed |
|
|
rs755787386 CA787576 |
309 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA339828730 rs1283273029 |
310 | F>I | No |
ClinGen gnomAD |
|
|
rs1314179585 CA339828726 |
310 | F>S | No |
ClinGen TOPMed |
|
|
CA787575 rs747716832 |
312 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA20978349 rs571438719 |
313 | G>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1409581104 CA339828706 |
313 | G>D | No |
ClinGen gnomAD |
|
|
rs571438719 CA787573 |
313 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA339828695 rs1401348131 |
314 | M>I | No |
ClinGen gnomAD |
|
| TCGA novel | 314 | M>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs766419653 CA787571 |
315 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA339828686 rs1479364545 |
316 | A>T | No |
ClinGen gnomAD |
|
|
rs141231524 CA787570 |
317 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA339828670 rs1478984700 |
318 | L>R | No |
ClinGen gnomAD |
|
|
rs1569819818 CA339828663 |
320 | I>V | No |
ClinGen Ensembl |
|
| TCGA novel | 321 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA787566 rs762123479 |
322 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765071983 CA787568 |
322 | I>V | No |
ClinGen ExAC |
|
|
rs1390141352 CA339828644 |
323 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs776648885 CA787565 |
323 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1390141352 CA339828643 |
323 | P>S | No |
ClinGen TOPMed gnomAD |
|
| rs1200902417 | 324 | L>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA787563 rs760657235 |
328 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA787562 rs776130524 |
328 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA339828613 rs1202165750 |
328 | N>S | No |
ClinGen TOPMed |
|
|
rs746326603 CA787560 |
330 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772545774 CA787561 |
330 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1195895183 CA339828564 |
335 | T>S | No |
ClinGen TOPMed |
|
|
rs771222010 CA787557 |
336 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA787558 rs551438359 |
336 | V>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA787556 rs747854442 |
337 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339828544 rs1405031125 |
338 | L>R | No |
ClinGen gnomAD |
|
|
rs372756268 CA787555 |
340 | S>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs754588413 CA787554 CA20978268 |
343 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339828511 rs1439835365 |
343 | G>V | No |
ClinGen gnomAD |
|
|
CA787553 rs746466339 |
345 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1181305924 CA339828493 |
346 | G>D | No |
ClinGen gnomAD |
|
|
rs1460623316 CA339828488 |
347 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs780186931 CA787552 |
349 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs934982130 CA20978246 |
351 | P>A | No |
ClinGen TOPMed |
|
|
rs199867641 CA787551 |
352 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs750344149 CA787550 |
355 | E>D | No |
ClinGen ExAC |
|
|
rs1409434183 CA339828420 |
357 | D>A | No |
ClinGen TOPMed gnomAD |
|
|
CA339828403 rs1314452624 |
358 | A>V | No |
ClinGen gnomAD |
|
|
rs1240070826 CA339828390 |
359 | D>E | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 359 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1354418055 CA339828354 |
362 | N>S | No |
ClinGen gnomAD |
|
|
CA339828338 rs1433678369 |
363 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA339828333 rs1311596329 |
364 | G>S | No |
ClinGen gnomAD |
|
|
CA339828327 rs1450657410 |
364 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs765126965 CA787549 |
365 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA787548 rs756943727 |
367 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339828286 rs756943727 |
367 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1046307560 CA20978233 |
369 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1158218392 CA339828223 |
373 | G>E | No |
ClinGen gnomAD |
|
|
CA787547 rs754147501 |
374 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA339828216 rs1260189999 |
374 | G>S | No |
ClinGen TOPMed |
|
|
CA787546 COSM87802 rs764218330 |
376 | F>C | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
| TCGA novel | 376 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA339828163 rs1443596112 |
377 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA787545 rs200725321 |
378 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1569818986 CA339828118 |
381 | D>N | No |
ClinGen Ensembl |
|
|
CA339828048 rs1175906064 |
385 | M>I | No |
ClinGen TOPMed |
|
|
rs1265337776 CA339828067 |
385 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA339828034 rs1484406239 |
387 | R>* | No |
ClinGen gnomAD |
|
|
rs1156607605 CA339828021 |
389 | G>* | No |
ClinGen TOPMed |
|
|
CA339828014 rs775569937 |
389 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA787544 rs775569937 |
389 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA339828008 rs1488915802 |
390 | H>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1288223616 CA339828005 |
390 | H>R | No |
ClinGen gnomAD |
|
|
rs1403834745 CA339827981 |
392 | Q>K | No |
ClinGen TOPMed |
|
|
CA787543 rs767547403 |
394 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339827958 rs1241612015 |
395 | M>V | No |
ClinGen TOPMed |
|
|
rs549272179 CA787542 |
396 | L>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs774784408 CA787541 |
397 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339827912 rs1230254927 |
398 | A>G | No |
ClinGen gnomAD |
|
|
CA339827918 rs1569818684 |
398 | A>T | No |
ClinGen Ensembl |
|
|
rs771345075 CA787540 |
399 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA339827850 rs1400486013 |
403 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA787538 rs201254863 |
406 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA339827787 rs1368551364 |
408 | A>T | No |
ClinGen gnomAD |
|
|
rs1251440536 CA339827778 |
408 | A>V | No |
ClinGen TOPMed |
|
|
rs1174078938 CA339827742 |
410 | W>* | No |
ClinGen gnomAD |
|
|
CA339827722 rs1166383002 |
411 | M>I | No |
ClinGen gnomAD |
|
|
CA339827710 rs1426400073 |
412 | I>T | No |
ClinGen gnomAD |
|
|
CA787537 rs488295 |
414 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA787536 rs746620472 |
417 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1425091256 CA339827628 |
418 | K>N | No |
ClinGen TOPMed |
|
|
CA787535 rs779739043 |
418 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1165352866 CA339827620 |
419 | G>C | No |
ClinGen TOPMed |
|
|
rs1363645953 CA339827604 |
420 | M>T | No |
ClinGen TOPMed |
|
|
CA339827580 rs1488165783 |
422 | G>S | No |
ClinGen gnomAD |
|
|
rs560118161 CA787534 |
424 | M>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs949218260 CA20978156 |
425 | D>Y | No |
ClinGen TOPMed |
|
|
CA787533 rs745811668 |
427 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs916371653 CA20978139 |
429 | S>C | No |
ClinGen TOPMed |
|
|
CA787532 rs539815651 |
429 | S>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs539815651 CA20978128 |
429 | S>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 431 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1277312024 CA339827455 |
432 | T>A | No |
ClinGen gnomAD |
|
|
CA787531 rs757141719 |
432 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA339827439 rs1281234369 |
434 | V>L | No |
ClinGen gnomAD |
|
|
CA787529 rs777575586 |
435 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1305275219 CA339827430 |
436 | V>I | No |
ClinGen TOPMed |
|
|
CA339827424 rs1390775409 |
437 | T>A | No |
ClinGen gnomAD |
|
|
CA787528 rs148620404 |
438 | M>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1460131236 CA339827410 |
439 | Q>* | No |
ClinGen gnomAD |
|
| TCGA novel | 439 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA339827402 rs1353600430 |
440 | H>N | No |
ClinGen gnomAD |
|
|
CA20978102 rs368208615 |
441 | C>* | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA787527 rs752852040 |
442 | T>R | No |
ClinGen ExAC gnomAD |
|
|
rs1317696893 CA339827376 |
443 | K>N | No |
ClinGen TOPMed |
|
|
rs1426253097 CA339827374 |
444 | D>N | No |
ClinGen gnomAD |
|
|
rs375335072 CA787526 |
445 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs759601240 CA787525 |
446 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1193041955 CA339827349 |
447 | P>L | No |
ClinGen gnomAD |
|
|
rs1193041955 CA339827351 |
447 | P>R | No |
ClinGen gnomAD |
|
|
CA787523 rs766769354 |
448 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs990656778 CA20978078 |
449 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
rs145089929 CA20978053 |
450 | M>T | No |
ClinGen ESP TOPMed |
|
|
rs942135254 CA20978077 |
450 | M>V | No |
ClinGen TOPMed |
|
|
rs1319648145 CA339827323 |
451 | E>G | No |
ClinGen gnomAD |
|
|
CA787522 rs763420546 |
453 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA339827308 rs1237837923 |
453 | C>Y | No |
ClinGen TOPMed |
|
|
CA339827298 rs1569817811 |
455 | M>V | No |
ClinGen Ensembl |
|
|
rs146244343 CA787521 |
456 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs146244343 CA339827287 |
456 | P>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1232378289 CA339827288 |
456 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA787519 rs373490630 CA339827274 |
459 | G>R | No |
ClinGen ESP ExAC gnomAD |
|
|
CA339827272 rs1375679826 |
459 | G>V | No |
ClinGen gnomAD |
|
|
CA339827258 rs1466866316 |
461 | R>L | No |
ClinGen gnomAD |
|
|
rs775223234 CA787518 |
461 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA787516 rs544321343 |
463 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA339827249 rs544321343 COSM909348 |
463 | V>M | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA787514 rs770795728 |
464 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA787515 rs779032548 |
464 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA339827236 rs1355820041 |
465 | R>C | No |
ClinGen TOPMed |
|
| TCGA novel | 465 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs749210713 CA339827234 |
465 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs749210713 CA787513 |
465 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs777436275 CA787512 |
466 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA339827213 rs752977074 |
469 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs752977074 CA787510 COSM3400775 |
469 | E>K | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA339827195 rs1199701175 |
471 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1241012795 CA339827198 |
471 | A>T | No |
ClinGen gnomAD |
|
|
rs1199701175 CA339827194 |
471 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA787508 rs755094827 |
472 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs751621137 CA339827174 |
474 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 474 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA339827171 rs1352252326 |
475 | V>L | No |
ClinGen gnomAD |
|
| TCGA novel | 477 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA339827147 rs1230207615 |
478 | K>T | No |
ClinGen TOPMed gnomAD |
|
|
CA339827133 rs1050917 |
480 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765531562 CA787503 |
480 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1050917 CA787505 |
480 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA787506 rs369351852 |
480 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1395881804 CA339827130 |
481 | L>M | No |
ClinGen gnomAD |
|
|
rs377118062 CA787502 |
482 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA787499 rs759166954 |
483 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs767247498 CA787500 |
483 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA339827115 rs373650086 |
484 | R>K | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs373650086 CA20977927 |
484 | R>M | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1482871027 CA339827105 |
485 | E>D | No |
ClinGen TOPMed |
|
|
CA339827096 rs1383686944 |
487 | W>R | No |
ClinGen gnomAD |
|
|
rs1186559945 CA339827075 |
489 | G>D | No |
ClinGen gnomAD |
|
|
rs1258018990 CA339827074 |
490 | L>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs773766295 CA787498 |
491 | T>A | No |
ClinGen ExAC |
|
|
rs1487934941 CA339827060 |
492 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA787496 rs143322993 |
493 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA787494 rs150795467 |
494 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA787493 rs747910414 |
495 | I>S | No |
ClinGen ExAC gnomAD |
|
|
rs1245071354 CA339827034 |
496 | K>R | No |
ClinGen gnomAD |
|
| TCGA novel | 497 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1341401210 CA339827022 |
498 | S>G | No |
ClinGen gnomAD |
|
|
rs141193829 CA787491 |
499 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779999540 CA787489 |
500 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1360493304 CA339827007 |
500 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs750947412 CA787487 |
501 | C>F | No |
ClinGen ExAC gnomAD |
|
|
rs1277717921 CA339827004 |
501 | C>R | No |
ClinGen TOPMed |
|
|
rs1162822803 CA339826997 |
502 | A>T | No |
ClinGen gnomAD |
|
|
CA339826992 rs1473267061 |
502 | A>V | No |
ClinGen gnomAD |
|
|
rs200253131 CA787485 |
504 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339826972 rs754232647 |
506 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754232647 CA787484 |
506 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM140924 rs150126878 CA787482 |
507 | P>S | upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA787480 rs773996695 |
508 | N>K | No |
ClinGen ExAC TOPMed |
|
|
CA339826958 rs1210008642 |
508 | N>S | No |
ClinGen gnomAD |
|
|
rs1210008642 CA339826959 |
508 | N>T | No |
ClinGen gnomAD |
|
|
rs1557479268 CA339826952 |
509 | L>R | No |
ClinGen Ensembl |
|
|
CA787478 rs765862292 |
510 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs773060658 CA787476 |
511 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA20977741 rs17852727 |
514 | Q>* | No |
ClinGen Ensembl |
|
|
CA787474 rs748025354 |
514 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs374986321 CA787472 |
516 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374986321 CA787473 |
516 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1322998684 CA339826901 |
517 | P>S | No |
ClinGen gnomAD |
|
|
CA339826903 rs1322998684 |
517 | P>T | No |
ClinGen gnomAD |
|
|
CA339826892 rs201022411 CA787470 |
518 | P>C | No |
ClinGen ExAC TOPMed gnomAD |
No associated diseases with Q9BYC2
4 regional properties for Q9BYC2
Functions
| Description | ||
|---|---|---|
| EC Number | 2.8.3.5 | CoA-transferases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| mitochondrial matrix | The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation. |
| mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
| motile cilium | A cilium which may have a variable arrangement of axonemal microtubules and also contains molecular motors. It may beat with a whip-like pattern that promotes cell motility or transport of fluids and other cells across a cell surface, such as on epithelial cells that line the lumenal ducts of various tissues; or they may display a distinct twirling motion that directs fluid flow asymmetrically across the cellular surface to affect asymmetric body plan organization. Motile cilia can be found in single as well as multiple copies per cell. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| 3-oxoacid CoA-transferase activity | Catalysis of the reaction: succinyl-CoA + a 3-oxo acid = succinate + a 3-oxo-acyl-CoA. |
| CoA-transferase activity | Catalysis of the transfer of a coenzyme A (CoA) group from one compound (donor) to another (acceptor). |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| cellular ketone body metabolic process | The chemical reactions and pathways involving ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone, as carried out by individual cells. Although 3-hydroxybutyrate is not a ketone, it is classed as a ketone body because it exists in an equilibrium with acetoacetate. Ketone bodies may accumulate in excessive amounts in the body in starvation, diabetes mellitus or in other defects of carbohydrate metabolism. |
| ketone body catabolic process | The chemical reactions and pathways resulting in the breakdown of ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone. Ketone bodies can be used as an energy source as an alternative to glucose. Utilization of ketone bodies in peripheral tissues involves conversion of acetoacetate to acetoacetyl-CoA, which is then converted to two molecules of acetyl-CoA. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAALRLLASV | LGRGVPAGGS | GLALSQGCAR | CFATSPRLRA | KFYADPVEMV | KDISDGATVM |
| 70 | 80 | 90 | 100 | 110 | 120 |
| IGGFGLCGIP | ENLIAALLRT | RVKDLQVVSS | NVGVEDFGLG | LLLAARQVRR | IVCSYVGENT |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LCESQYLAGE | LELELTPQGT | LAERIRAGGA | GVPAFYTPTG | YGTLVQEGGA | PIRYTPDGHL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| ALMSQPREVR | EFNGDHFLLE | RAIRADFALV | KGWKADRAGN | VVFRRSARNF | NVPMCKAADV |
| 250 | 260 | 270 | 280 | 290 | 300 |
| TAVEVEEIVE | VGAFPPEDIH | VPNIYVDRVI | KGQKYEKRIE | RLTILKEEDG | DAGKEEDART |
| 310 | 320 | 330 | 340 | 350 | 360 |
| RIIRRAALEF | EDGMYANLGI | GIPLLASNFI | SPSMTVHLHS | ENGILGLGPF | PTEDEVDADL |
| 370 | 380 | 390 | 400 | 410 | 420 |
| INAGKQTVTV | LPGGCFFASD | DSFAMIRGGH | IQLTMLGAMQ | VSKYGDLANW | MIPGKKVKGM |
| 430 | 440 | 450 | 460 | 470 | 480 |
| GGAMDLVSSQ | KTRVVVTMQH | CTKDNTPKIM | EKCTMPLTGK | RCVDRIITEK | AVFDVHRKKE |
| 490 | 500 | 510 | |||
| LTLRELWEGL | TVDDIKKSTG | CAFAVSPNLR | PMQQVAP |