Q9BTW9
Gene name |
TBCD (KIAA0988, SSD1, TFCD, PP1096) |
Protein name |
Tubulin-specific chaperone D |
Names |
Beta-tubulin cofactor D, tfcD, SSD-1, Tubulin-folding cofactor D |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:6904 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9BTW9
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9BTW9-F1 | Predicted | AlphaFoldDB |
1030 variants for Q9BTW9
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA8861496 rs533171147 RCV001329506 |
10 | G>D | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs1394649624 CA401622384 RCV001332704 |
44 | R>P | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs2047391529 RCV001332706 |
72 | H>Y | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1409600874 RCV000995888 RCV000762220 CA401622611 |
77 | H>R | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
CA8861555 rs747070586 RCV001329507 |
107 | Y>C | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001336902 rs2048013005 |
130 | E>D | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000624872 rs560749650 RCV001860444 CA8861680 |
209 | V>I | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000258908 CA8861712 VAR_077968 rs778417127 |
229 | L>R | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome PEBAT [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV000479322 RCV000764151 rs1064796675 CA16620656 |
294 | R>W | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001008022 rs773790897 RCV000853292 CA8861835 |
323 | R>* | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1419604407 CA401619657 RCV002529048 RCV000578893 |
330 | Q>* | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs953299085 COSM986175 VAR_077969 CA295243124 |
374 | T>M | Variant assessed as Somatic; impact. endometrium PEBAT; severely decreased interaction with beta tubulin; does not affect localization to centrosome [NCI-TCGA, Cosmic, UniProt] | Yes |
ClinGen cosmic curated UniProt NCI-TCGA TOPMed dbSNP |
|
rs183349235 CA295243164 RCV002242181 RCV001332703 |
376 | V>M | Variant assessed as Somatic; 5.361e-05 impact. Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar 1000Genomes NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000258901 VAR_077970 rs764085684 CA8861900 |
377 | R>Q | Variant assessed as Somatic; 0.0 impact. Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome PEBAT; decreased protein abundance; severely decreased interaction with beta tubulin; does not affect localization to centrosome [NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC NCI-TCGA dbSNP gnomAD |
|
VAR_077971 rs886041086 CA10602688 RCV000258898 |
387 | M>R | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome PEBAT; decreased function in neuron morphogenesis; severely decreased interaction with ARL2; decreased interaction with TBCE; decreased interaction with beta tubulin [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV000494236 RCV002524019 rs763143236 CA8861967 |
415 | A>V | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001249655 rs762115783 CA8861971 |
419 | G>R | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP |
|
CA8862526 rs373604816 RCV001336896 |
442 | A>T | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs1311737177 RCV000853291 CA401620006 |
447 | A>V | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001089986 rs1567926154 CA401620438 |
467 | A>T | Variant assessed as Somatic; 0.0 impact. Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
|
RCV001610768 VAR_077972 rs775014444 RCV000335816 CA8862558 |
475 | A>T | Variant assessed as Somatic; 0.0 impact. Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome PEBAT; decreased function in tubulin complex assembly; increased protein degradation [NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC NCI-TCGA dbSNP gnomAD |
|
CA8862561 RCV000996628 RCV001256001 rs756576748 |
478 | Y>C | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA401622819 rs752953575 RCV000995889 |
502 | R>G | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs1567966866 RCV000714809 CA401624935 |
513 | A>T | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000425448 RCV002525487 rs550172307 RCV001336897 CA8862675 |
539 | V>I | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV000723330 RCV000522161 CA401628072 rs1555641324 |
554 | A>V | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001858617 rs758413695 RCV000985233 CA8862717 |
571 | K>R | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
VAR_077973 rs1567999844 CA401630045 |
586 | A>V | PEBAT; decreased function in tubulin complex assembly [UniProt] | Yes |
ClinGen UniProt Ensembl dbSNP |
|
rs749225304 VAR_077974 CA8862809 RCV002518796 RCV000258894 |
626 | A>T | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome PEBAT; decreased protein abundance; does not affect localization to centrosome [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs2060355104 RCV001332705 |
653 | Q>* | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001267696 rs2061363316 |
700 | I>missing | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA401632841 rs200903034 RCV000714529 RCV000714528 |
713 | H>D | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome Thiel-Behnke corneal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA401633004 rs1568053442 RCV000785942 |
737 | C>R | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA8862997 RCV002546797 RCV001483779 rs34791072 RCV001336898 |
747 | E>K | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001336899 rs374216515 CA8863012 RCV002546798 |
758 | T>M | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs754750539 CA8863014 RCV000258906 RCV000523090 |
760 | Y>* | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001249656 rs2061632089 |
769 | E>missing | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs181969865 CA10602686 VAR_077975 RCV000258905 |
772 | R>C | Variant assessed as Somatic; 0.0 impact. Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome PEBAT; decreased function in neuron morphogenesis; decreased interaction with ARL2; decreased interaction with TBCE; decreased interaction with beta tubulin [NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV001095663 CA8863020 rs186699341 RCV000916037 RCV002540899 |
776 | S>L | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs752473581 RCV001336900 CA8863050 RCV002546799 |
810 | S>T | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs2061771729 RCV001332707 |
822 | I>V | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs749860401 RCV000624837 CA401633982 |
823 | A>E | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000896766 rs202149526 CA8863110 RCV001336901 |
856 | M>V | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1369909567 RCV001332708 |
860 | T>I | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA8863185 RCV001332709 rs745875454 RCV002546593 RCV001865764 |
897 | H>R | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV000258913 VAR_077976 CA10602687 rs886041085 |
921 | A>T | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome PEBAT; decreased interaction with ARL2; decreased interaction with TBCE; decreased interaction with beta tubulin [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP |
|
rs745410700 RCV001332710 CA8863227 |
922 | A>T | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001267697 rs775950678 CA8863236 |
930 | H>R | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA10602689 VAR_077977 rs886041087 RCV000258900 |
937 | P>R | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome PEBAT; decreased interaction with TBCE; decreased interaction with beta tubulin; does not affect interaction with ARL2 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
VAR_077978 CA295301594 rs867484272 |
994 | T>M | PEBAT; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt Ensembl dbSNP |
|
CA8863415 rs760635077 RCV000995891 RCV001858824 |
1042 | P>L | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs2062710087 RCV001089987 |
1065 | H>R | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001194226 RCV001262005 rs2062710977 RCV001553029 |
1071 | L>W | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA8863566 RCV001254044 rs772606107 |
1103 | G>S | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA8863572 rs764003906 VAR_077979 |
1105 | V>M | PEBAT; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV000258893 CA8863580 rs755177846 RCV001859530 VAR_077980 |
1122 | P>L | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome PEBAT; severely decreased protein abundance; does not affect localization to centrosome; decreased interaction with ARL2; decreased interaction with TBCE; decreased interaction with beta tubulin [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs1265837740 RCV001329508 RCV002293524 CA401636900 |
1171 | R>C | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001329509 CA8863679 RCV002546330 rs775453008 |
1171 | R>L | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA8863684 RCV001329510 RCV002546331 rs767635450 |
1180 | V>I | Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA401622122 rs1279157812 |
2 | A>T | No |
ClinGen gnomAD |
|
|
rs1370974061 CA401622127 |
2 | A>V | No |
ClinGen gnomAD |
|
|
CA401622140 rs1333992290 |
4 | S>R | No |
ClinGen gnomAD |
|
|
CA401622142 rs1354004393 |
5 | D>H | No |
ClinGen TOPMed |
|
|
CA295248404 rs1010575243 |
6 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
CA401622149 rs1010575243 |
6 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA401622150 rs1010575243 |
6 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA401622159 rs1291478820 |
7 | P>Q | No |
ClinGen gnomAD |
|
|
CA401622162 rs1203424416 |
8 | A>T | No |
ClinGen gnomAD |
|
|
rs1473086651 CA401622166 |
8 | A>V | No |
ClinGen TOPMed |
|
|
CA401622171 rs1184731475 |
9 | A>E | No |
ClinGen gnomAD |
|
|
CA401622168 rs1482289223 |
9 | A>T | No |
ClinGen gnomAD |
|
|
CA8861495 rs11550062 |
10 | G>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA401622180 rs1406007129 |
11 | G>D | No |
ClinGen gnomAD |
|
|
CA295248442 rs1044663167 |
11 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA401622185 rs1449546253 |
12 | P>S | No |
ClinGen TOPMed |
|
|
rs1411439196 CA401622190 |
13 | E>K | No |
ClinGen gnomAD |
|
|
CA295248456 rs907337469 |
14 | E>K | No |
ClinGen TOPMed |
|
|
CA8861499 rs761196902 |
15 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA8861500 rs769438572 |
16 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA8861501 rs775011890 |
17 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1003016750 CA295248477 |
18 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA8861502 rs762541329 |
18 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1348366650 CA401622231 |
19 | E>* | No |
ClinGen TOPMed |
|
|
CA295248489 rs1026336168 |
20 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1253057697 CA401622252 |
22 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA401622267 rs1473185255 |
25 | A>T | No |
ClinGen gnomAD |
|
|
CA295248545 rs916503100 |
28 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA401622297 rs1431928097 |
30 | F>I | No |
ClinGen gnomAD |
|
|
CA401622308 rs1169464820 |
31 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs765300095 CA295248550 |
32 | E>Q | No |
ClinGen Ensembl |
|
|
CA401622319 rs1394043293 |
33 | S>G | No |
ClinGen gnomAD |
|
|
rs1336113939 CA401622321 |
33 | S>N | No |
ClinGen gnomAD |
|
|
CA8861506 rs767510826 |
34 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA401622337 rs1343661192 |
35 | E>D | No |
ClinGen gnomAD |
|
|
CA8861507 rs750366038 |
37 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401622354 rs1347638638 |
38 | A>E | No |
ClinGen gnomAD |
|
|
rs1568080255 CA401622349 |
38 | A>T | No |
ClinGen Ensembl |
|
|
CA8861509 rs543962889 |
39 | L>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1193088336 CA401622367 |
41 | G>D | No |
ClinGen gnomAD |
|
|
rs1451379724 CA401622372 |
42 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1221032061 CA401622375 |
42 | R>L | No |
ClinGen TOPMed |
|
|
rs1451379724 CA401622370 |
42 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
CA401622382 rs1394649624 |
44 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA295248588 rs973440027 |
44 | R>W | No |
ClinGen Ensembl |
|
|
rs755197813 CA8861511 |
45 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs779180075 CA8861512 |
46 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1400103676 CA401622399 |
47 | H>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1400103676 CA401622400 |
47 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA295248603 rs955360162 |
47 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA401622404 rs1366788831 |
48 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA295248632 rs924349931 |
49 | G>A | No |
ClinGen TOPMed |
|
|
rs1368252860 CA401622426 |
51 | A>V | No |
ClinGen gnomAD |
|
|
rs772565321 CA8861514 |
52 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1412323506 CA401622435 |
53 | R>G | No |
ClinGen TOPMed |
|
|
rs1412323506 CA401622434 |
53 | R>S | No |
ClinGen TOPMed |
|
|
rs933572056 CA295248636 |
54 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
rs933572056 CA401622440 |
54 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs778221063 CA8861515 |
58 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs911971278 CA295248661 RCV000514604 |
59 | R>Q | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
rs1272684905 CA401622506 |
62 | V>A | No |
ClinGen gnomAD |
|
|
CA8861527 rs760641255 |
63 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8861528 rs766312013 |
64 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs368034858 CA295253121 |
64 | M>V | No |
ClinGen ESP |
|
|
rs1323602692 CA401622525 |
65 | D>G | No |
ClinGen TOPMed |
|
|
CA401622534 rs1179664249 |
66 | K>R | No |
ClinGen gnomAD |
|
|
rs1414112759 CA401622543 CA401622544 |
67 | Y>* | No |
ClinGen gnomAD |
|
|
rs1598367135 CA401622542 |
67 | Y>S | No |
ClinGen Ensembl |
|
|
rs1472911081 CA401622547 |
68 | Q>* | No |
ClinGen gnomAD |
|
|
rs1164127534 CA401622583 |
73 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1164127534 CA401622584 |
73 | L>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA8861531 rs778788163 |
76 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401622605 rs1458979097 |
76 | P>S | No |
ClinGen gnomAD |
|
|
CA401622613 rs1409600874 |
77 | H>L | No |
ClinGen gnomAD |
|
|
CA8861545 rs766292394 |
79 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA295253205 rs893196978 |
79 | E>K | No |
ClinGen Ensembl |
|
|
rs1377536682 CA401625553 |
80 | W>C | No |
ClinGen gnomAD |
|
|
rs960027388 CA295260624 |
81 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
CA401625576 rs1313607479 |
81 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
rs776631367 CA8861546 |
84 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA8861547 rs759330567 |
88 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs375951418 CA8861548 |
89 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401625791 rs1351399026 |
90 | Q>E | No |
ClinGen TOPMed |
|
|
CA8861549 rs752783454 |
90 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1254176772 CA401625864 |
92 | Q>R | No |
ClinGen gnomAD |
|
| TCGA novel | 93 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1162350932 CA401625962 |
97 | S>F | No |
ClinGen TOPMed |
|
|
CA8861550 rs758732870 |
98 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8861551 rs535565721 |
99 | V>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs757694767 CA8861553 |
100 | H>P | No |
ClinGen ExAC TOPMed |
|
|
rs369135151 CA8861552 |
100 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs974054390 CA295260706 |
103 | F>L | No |
ClinGen Ensembl |
|
| TCGA novel | 104 | K>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs546964087 CA295260712 |
104 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA |
|
rs1447095988 CA401626070 |
105 | F>L | No |
ClinGen gnomAD |
|
|
CA8861556 rs746401695 |
108 | I>N | No |
ClinGen ExAC gnomAD |
|
|
CA401626145 rs1430835388 |
108 | I>V | No |
ClinGen gnomAD |
|
| TCGA novel | 110 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8861559 rs778520826 |
110 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA8861558 rs778520826 COSM1267489 |
110 | T>S | oesophagus [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs907883723 CA295260797 |
111 | K>E | No |
ClinGen TOPMed |
|
|
rs750717767 CA8861577 RCV000598715 |
113 | R>* | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA8861578 rs756688672 |
114 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401627220 rs1461837043 |
115 | Y>N | No |
ClinGen TOPMed |
|
|
rs752265380 CA8861580 |
115 | Y>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 116 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs757905191 CA401627244 |
116 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8861583 rs201192044 |
117 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8861582 rs201192044 |
117 | T>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1285955882 CA401627260 |
118 | F>L | No |
ClinGen gnomAD |
|
|
CA8861585 rs781081247 |
119 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs563090446 CA295262430 |
120 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA TOPMed gnomAD |
|
CA8861586 rs745626891 |
120 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401627326 rs1489691664 |
123 | P>L | No |
ClinGen gnomAD |
|
|
rs769827032 CA8861587 |
123 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA401627339 rs1469262780 |
124 | H>Q | No |
ClinGen TOPMed |
|
|
CA401627335 rs1411887514 |
124 | H>R | No |
ClinGen gnomAD |
|
|
rs1200519595 CA401627330 |
124 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs775562890 CA8861588 |
127 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA295262444 rs868046572 |
127 | A>V | No |
ClinGen Ensembl |
|
|
CA8861591 rs774524442 |
128 | D>A | No |
ClinGen ExAC gnomAD |
|
|
CA8861590 rs768872489 |
128 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401627383 rs768872489 |
128 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1001105641 CA295262469 |
129 | V>I | No |
ClinGen TOPMed |
|
|
CA295262478 rs1001105641 |
129 | V>L | No |
ClinGen TOPMed |
|
|
rs1307246033 CA401627434 |
133 | L>S | No |
ClinGen gnomAD |
|
|
rs750852323 CA8861595 |
135 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401627471 rs1288886937 |
136 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA295262514 rs530523082 |
137 | T>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8861596 rs530523082 |
137 | T>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1291589060 CA401627495 |
138 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
| TCGA novel | 141 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1598403897 CA401627578 |
144 | H>R | No |
ClinGen Ensembl |
|
|
CA401627586 rs1483086820 |
145 | E>Q | No |
ClinGen gnomAD |
|
|
rs1199292715 CA401627669 |
147 | W>C | No |
ClinGen gnomAD |
|
|
CA401627680 rs1281282573 |
149 | T>A | No |
ClinGen gnomAD |
|
|
rs771105928 CA8861633 |
150 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777029100 CA8861634 |
150 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs370611069 CA295264386 |
151 | Y>C | No |
ClinGen ESP TOPMed gnomAD |
|
|
COSM562733 rs765798426 CA8861636 |
152 | M>I | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs892804364 CA295264394 |
155 | L>P | No |
ClinGen Ensembl |
|
|
CA295264400 rs1020017368 |
159 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA8861640 rs749909437 |
163 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1317888785 CA401627807 |
168 | S>C | No |
ClinGen gnomAD |
|
|
CA8861641 rs755871476 |
169 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs1382474660 COSM1522724 CA401627813 |
169 | R>L | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA401627825 rs753748524 |
171 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766111987 CA8861642 |
171 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA401627829 rs1231471894 |
172 | G>R | No |
ClinGen gnomAD |
|
|
CA401627836 rs1598410621 |
173 | N>T | No |
ClinGen Ensembl |
|
|
rs570409629 CA295264438 |
178 | P>R | No |
ClinGen gnomAD |
|
|
rs1277122701 CA401627867 |
178 | P>S | No |
ClinGen gnomAD |
|
|
rs1228301388 CA401627879 |
180 | Q>E | No |
ClinGen gnomAD |
|
|
CA8861644 rs201980005 |
181 | A>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8861645 rs567077237 |
182 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs569286722 CA8861646 |
185 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8861647 rs758313349 |
186 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA401627917 rs1598410664 |
186 | M>V | No |
ClinGen Ensembl |
|
|
rs916586108 CA295264444 |
187 | D>G | No |
ClinGen Ensembl |
|
|
CA8861648 rs533823047 |
187 | D>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8861650 rs558681233 |
188 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1269539219 CA401627931 |
188 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA8861649 rs558681233 |
188 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA401627936 rs1472257488 |
189 | I>V | No |
ClinGen gnomAD |
|
|
rs941441669 CA295264489 |
193 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA8861672 rs549301332 |
195 | S>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA401629245 rs1312176002 |
196 | Y>C | No |
ClinGen gnomAD |
|
|
rs1452093587 CA401629300 |
198 | I>T | No |
ClinGen TOPMed |
|
|
CA401629282 rs1161761682 |
198 | I>V | No |
ClinGen TOPMed |
|
|
rs1248494841 COSM1387534 CA401629360 |
201 | D>E | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs769105077 CA8861674 |
201 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1449387690 CA401629416 |
204 | R>* | No |
ClinGen gnomAD |
|
|
CA8861675 rs774998453 |
204 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8861677 rs770581827 |
205 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs759299241 CA8861679 |
208 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401629573 rs1183852307 COSM986173 |
211 | V>A | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA8861682 rs762803364 |
211 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA295272678 rs772961655 |
213 | R>G | No |
ClinGen gnomAD |
|
|
rs763729051 CA8861683 |
213 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA295278901 rs891915671 |
216 | T>K | No |
ClinGen Ensembl |
|
|
CA8861708 rs755109975 |
217 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs779456572 CA8861709 |
218 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401631509 rs1299115282 |
218 | P>S | No |
ClinGen gnomAD |
|
|
CA401631551 rs1326425201 |
221 | K>T | No |
ClinGen gnomAD |
|
|
CA8861711 rs565743076 |
222 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1349345713 CA401631579 |
225 | M>V | No |
ClinGen TOPMed |
|
|
rs747406617 CA8861713 |
230 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA8861715 rs539682839 |
231 | W>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8861714 rs539682839 |
231 | W>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1425258350 CA401631636 |
232 | S>R | No |
ClinGen gnomAD |
|
|
CA8861716 rs748999969 |
234 | C>G | No |
ClinGen ExAC gnomAD |
|
|
rs768267548 CA8861717 |
238 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM3378406 CA8861718 rs370029470 |
238 | R>H | pancreas [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs761583961 CA8861719 |
239 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1034610778 CA295278976 |
241 | F>L | No |
ClinGen Ensembl |
|
|
rs1347156825 CA401631754 |
242 | Q>R | No |
ClinGen gnomAD |
|
|
rs1405527585 CA401631760 |
243 | T>A | No |
ClinGen gnomAD |
|
|
rs552699232 CA8861723 |
244 | M>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA401631785 rs1467543987 |
246 | G>V | No |
ClinGen gnomAD |
|
|
CA8861725 rs753825990 |
247 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA8861724 rs753825990 |
247 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs765538480 CA8861726 |
249 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA401631803 rs1218920095 |
250 | M>V | No |
ClinGen gnomAD |
|
|
CA401631816 rs1490935890 |
251 | D>G | No |
ClinGen gnomAD |
|
|
rs1290088207 CA401631811 |
251 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs375958159 CA8861727 |
253 | T>M | No |
ClinGen ESP ExAC gnomAD |
|
|
CA401631837 rs1468674087 |
255 | Q>* | No |
ClinGen gnomAD |
|
|
CA401631845 rs1178970120 |
256 | A>S | No |
ClinGen gnomAD |
|
|
CA401633050 rs1247156871 |
259 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA401633043 rs1338295457 |
259 | Q>K | No |
ClinGen gnomAD |
|
|
CA401633056 rs1487690279 |
260 | I>L | No |
ClinGen gnomAD |
|
|
CA8861760 rs545640245 |
263 | H>N | No |
ClinGen 1000Genomes ExAC |
|
|
rs1297418593 CA401633113 |
265 | K>E | No |
ClinGen gnomAD |
|
|
rs747824288 CA8861761 |
265 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs563325518 CA8861762 |
266 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1274264790 CA401633130 |
266 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA295292661 rs1041880215 |
267 | E>K | No |
ClinGen Ensembl |
|
|
CA8861765 rs770963737 |
268 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs746762918 CA8861764 |
268 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1392453972 CA401633170 |
269 | C>F | No |
ClinGen TOPMed |
|
|
rs1392453972 CA401633166 |
269 | C>Y | No |
ClinGen TOPMed |
|
|
CA8861766 rs776434912 |
272 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
rs759485255 CA8861767 |
273 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA8861789 rs774443065 |
273 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 274 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401633353 rs1431747846 |
276 | V>D | No |
ClinGen TOPMed gnomAD |
|
|
CA8861790 rs762038197 |
277 | L>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 278 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs767798433 CA401633377 |
278 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000658796 rs1345239400 CA401633406 |
281 | D>N | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
rs1359737686 CA401633452 |
284 | R>K | No |
ClinGen TOPMed |
|
|
CA401633479 rs1285688363 |
286 | P>S | No |
ClinGen gnomAD |
|
|
CA8861794 rs766852726 |
288 | S>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 288 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1293251631 COSM1522723 CA401633543 |
290 | Q>H | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs1598577206 CA401633548 |
291 | T>P | No |
ClinGen Ensembl |
|
|
CA8861795 rs375327000 |
292 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA295295915 rs949623707 RCV000521475 |
294 | R>Q | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
rs574847599 CA401633614 |
297 | G>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8861796 rs574847599 |
297 | G>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1288934477 CA401633666 |
301 | V>A | No |
ClinGen gnomAD |
|
|
rs1333807670 CA401633658 |
301 | V>L | No |
ClinGen TOPMed |
|
|
rs751190601 CA8861798 |
303 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756891794 CA8861799 |
303 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1269463580 CA401633694 |
304 | L>V | No |
ClinGen gnomAD |
|
|
CA8861800 rs781170967 |
305 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs756178662 CA8861802 |
307 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1598577381 CA401633733 |
309 | L>R | No |
ClinGen Ensembl |
|
|
rs1162258155 CA401633738 |
310 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs780136255 CA8861803 |
311 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA8861804 rs780136255 |
311 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401633765 rs1423083288 |
314 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA401633767 rs768633151 |
315 | A>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs768633151 CA8861805 |
315 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs748352875 CA8861807 |
316 | W>L | No |
ClinGen ExAC gnomAD |
|
|
CA401619537 rs1598611350 |
318 | Y>S | No |
ClinGen Ensembl |
|
|
rs1240709920 CA401619554 |
319 | Q>R | No |
ClinGen gnomAD |
|
|
rs771304008 CA8861832 |
320 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759999176 COSM986174 CA8861833 |
320 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs771304008 CA8861831 |
320 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401619591 rs1168998995 |
323 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1168998995 CA401619589 |
323 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1462575245 CA401619609 |
325 | L>S | No |
ClinGen gnomAD |
|
|
CA295241251 rs892223305 |
328 | N>D | No |
ClinGen Ensembl |
|
|
rs1454823972 CA401619654 |
329 | L>R | No |
ClinGen gnomAD |
|
|
rs369989197 CA8861838 |
331 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401619680 rs1568163576 |
332 | L>F | No |
ClinGen Ensembl |
|
|
rs1598611535 CA401619687 |
333 | T>P | No |
ClinGen Ensembl |
|
|
CA401619699 rs1293165449 |
334 | Q>* | No |
ClinGen TOPMed |
|
|
CA8861841 rs753641500 |
334 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8861840 rs200305278 |
334 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs754923800 CA8861842 |
335 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA295241261 rs905024253 |
335 | G>S | No |
ClinGen Ensembl |
|
|
CA401619716 rs1325049235 |
336 | Q>* | No |
ClinGen gnomAD |
|
|
rs369221447 CA8861843 |
336 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs752505926 CA8861844 |
337 | S>R | No |
ClinGen ExAC |
|
|
CA8861846 rs80212027 |
339 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA8861849 rs781457870 |
344 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1598611688 CA401619815 |
345 | T>N | No |
ClinGen Ensembl |
|
|
CA8861853 rs770270338 |
346 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA8861854 rs776069100 |
347 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs139258497 CA401619871 |
349 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA401619869 rs1344767344 |
349 | D>G | No |
ClinGen gnomAD |
|
|
rs771732507 CA8861856 |
349 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766110323 CA8861859 |
350 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs201515629 CA8861858 |
350 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1404312014 CA401619883 |
351 | D>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1404312014 CA401619882 |
351 | D>G | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 351 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA295241376 rs1006194327 |
352 | D>N | No |
ClinGen Ensembl |
|
|
rs1598611847 CA401619890 |
352 | D>V | No |
ClinGen Ensembl |
|
|
rs189185507 RCV000907869 CA8861861 |
353 | D>N | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA401619901 rs764878349 |
354 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA8861862 rs764878349 |
354 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs758289254 COSM355558 CA8861864 |
356 | E>D | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA401619915 rs1365578511 |
356 | E>G | No |
ClinGen TOPMed |
|
|
rs371384888 CA8861866 CA8861867 |
357 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371384888 CA8861865 |
357 | G>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401619922 rs1199342892 |
358 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs746010487 CA8861870 |
360 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756514766 CA8861871 |
360 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780232843 CA8861872 |
363 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA401620061 rs1272877059 |
367 | V>F | No |
ClinGen gnomAD |
|
|
rs1164063765 CA401620072 |
368 | G>E | No |
ClinGen TOPMed |
|
|
CA295243122 rs987049340 |
368 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1238851185 CA401620087 |
370 | K>E | No |
ClinGen gnomAD |
|
|
rs183349235 CA295243166 |
376 | V>L | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA8861899 rs750174260 |
377 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767747027 CA8861903 COSM473583 |
378 | W>* | kidney Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA8861902 rs761562082 |
378 | W>S | No |
ClinGen ExAC gnomAD |
|
|
rs1211333910 CA401620166 COSM437849 |
380 | A>V | Variant assessed as Somatic; impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA401620210 rs1404976208 |
385 | G>R | No |
ClinGen gnomAD |
|
|
CA295245662 rs901666996 |
386 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA295245667 rs1009887634 |
387 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1201031947 CA401620234 |
389 | G>S | No |
ClinGen gnomAD |
|
|
rs1383291499 CA401620257 |
392 | P>L | No |
ClinGen gnomAD |
|
|
CA295245674 rs995978899 |
392 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs778006753 CA8861932 |
393 | R>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 393 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8861933 rs372635763 |
394 | A>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1357608820 CA401620274 |
396 | A>T | No |
ClinGen TOPMed |
|
|
CA8861934 rs201046462 |
396 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA401620283 rs1325653408 |
397 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1355596010 CA401620287 COSM437850 |
398 | D>N | Variant assessed as Somatic; impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA401620303 rs1568170313 |
400 | V>F | No |
ClinGen Ensembl |
|
|
rs1598635404 CA401620306 |
400 | V>G | No |
ClinGen Ensembl |
|
|
CA8861937 rs768185693 |
401 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401620314 rs1598635448 |
402 | S>A | No |
ClinGen Ensembl |
|
|
rs1423292192 CA401620317 |
402 | S>F | No |
ClinGen TOPMed |
|
|
rs1277961033 CA401620336 |
405 | D>E | No |
ClinGen gnomAD |
|
|
CA401620339 rs1352580456 |
406 | C>R | No |
ClinGen gnomAD |
|
|
CA401620632 rs1369494837 |
410 | Q>* | No |
ClinGen gnomAD |
|
|
CA8861963 rs776938405 |
410 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs746095752 CA8861964 |
412 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA8861966 rs775419756 |
414 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1466385658 CA401620662 |
414 | K>M | No |
ClinGen gnomAD |
|
|
rs139015738 CA8861974 |
422 | A>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs930297178 CA295251328 |
422 | A>T | No |
ClinGen Ensembl |
|
|
CA8861973 rs139015738 |
422 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8861977 rs752121657 |
425 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1232692949 CA401620729 |
425 | E>G | No |
ClinGen TOPMed |
|
|
rs1202673718 CA401620751 |
428 | R>K | No |
ClinGen gnomAD |
|
|
CA8861979 rs777526060 |
428 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs1598665800 CA401620774 |
430 | G>V | No |
ClinGen Ensembl |
|
|
rs201042677 CA8861980 |
434 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs868151172 CA295251356 |
434 | P>L | No |
ClinGen Ensembl |
|
|
CA295251362 rs747895090 |
434 | P>S | No |
ClinGen gnomAD |
|
|
CA401620803 rs747895090 |
434 | P>T | No |
ClinGen gnomAD |
|
|
rs1428485417 CA401620822 |
436 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs368259507 CA8861983 |
436 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM562732 CA401620842 rs770119863 |
438 | V>L | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs770119863 CA8861986 |
438 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA8861987 rs775821768 |
439 | D>E | No |
ClinGen ExAC |
|
|
rs922290850 CA295251394 |
439 | D>Y | No |
ClinGen TOPMed |
|
|
COSM1189633 rs541763206 CA8862527 |
443 | V>M | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA8862528 rs761436080 |
445 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8862529 rs761436080 |
445 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401619993 rs1435076734 |
445 | L>V | No |
ClinGen TOPMed |
|
| TCGA novel | 446 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401620030 rs1341403012 |
449 | T>S | No |
ClinGen gnomAD |
|
|
CA401620049 rs765108456 |
450 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773678901 CA295245165 |
451 | D>N | No |
ClinGen TOPMed |
|
|
CA401620074 rs1261617293 |
452 | E>K | No |
ClinGen TOPMed |
|
|
rs376875000 CA8862539 |
454 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs572172021 CA8862538 |
454 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs757289175 CA8862540 |
456 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs369436693 CA8862541 COSM4139981 |
457 | C>R | ovary [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs374149751 COSM437854 CA8862544 |
459 | V>M | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 460 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8862545 rs749687858 |
461 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs376947064 CA8862546 |
462 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 463 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs371619945 CA8862547 |
463 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
rs760161414 CA8862548 |
464 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401620427 rs1599076921 |
465 | D>A | No |
ClinGen Ensembl |
|
|
CA401620434 rs1383756908 |
466 | A>S | No |
ClinGen gnomAD |
|
|
rs1197800410 CA401620456 |
469 | Y>C | No |
ClinGen gnomAD |
|
|
CA8862555 rs372560471 COSM562726 |
470 | V>L | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8862554 rs372560471 |
470 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs377049582 CA8862556 |
473 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401620498 rs1486251597 |
475 | A>V | No |
ClinGen TOPMed |
|
|
rs1350220621 COSM708544 CA401620501 |
476 | R>C | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1206646550 CA401620503 |
476 | R>H | Variant assessed as Somatic; 4.648e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1206646550 CA401620504 |
476 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
rs749601557 CA8862563 |
479 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs780565041 CA8862562 |
479 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA401620538 rs1599077298 |
482 | E>K | No |
ClinGen Ensembl |
|
|
CA8862564 rs530406016 |
485 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs530406016 CA8862565 |
485 | P>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs776248277 CA8862568 |
490 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| rs527893726 | 491 | S>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1345184341 CA401620599 |
491 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA401622702 rs1481816792 |
492 | S>R | No |
ClinGen gnomAD |
|
|
CA295260361 rs369830144 |
493 | A>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1252172174 CA401622718 |
493 | A>V | No |
ClinGen gnomAD |
|
|
rs977705282 CA295260363 |
495 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA401622768 rs1411985342 |
497 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA8862601 rs574660684 |
498 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1240183227 CA401622792 |
500 | F>L | No |
ClinGen TOPMed |
|
|
rs1599202065 CA401622813 |
501 | D>A | No |
ClinGen Ensembl |
|
|
COSM3403391 CA8862603 rs752953575 |
502 | R>* | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA8862604 rs758845515 |
502 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs141525720 CA295260398 |
503 | D>G | No |
ClinGen 1000Genomes |
|
| TCGA novel | 503 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8862605 rs376983324 |
508 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs745503075 CA401622945 |
509 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA8862606 rs745503075 |
509 | A>T | No |
ClinGen ExAC gnomAD |
|
| rs759467452 | 512 | A>= | Variant assessed as Somatic; 4.642e-05 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401624925 rs1483806231 |
512 | A>P | No |
ClinGen TOPMed |
|
| TCGA novel | 514 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1386128925 CA401624965 |
515 | Q>E | No |
ClinGen gnomAD |
|
|
CA8862638 rs775482671 |
518 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1258800991 CA401625048 |
521 | Q>R | No |
ClinGen TOPMed |
|
|
CA401626282 rs1166184250 |
522 | G>D | No |
ClinGen gnomAD |
|
|
CA8862668 rs763954597 |
522 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1166184250 CA401626278 |
522 | G>V | No |
ClinGen gnomAD |
|
|
CA8862671 rs781009709 |
525 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA8862670 rs757199429 |
525 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs756308366 CA8862673 |
530 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1384200926 CA401626421 |
534 | A>T | No |
ClinGen gnomAD |
|
|
rs1032997408 CA295267772 |
536 | Y>C | No |
ClinGen TOPMed |
|
|
rs1599299460 CA401626475 |
538 | A>T | No |
ClinGen Ensembl |
|
|
rs774626621 CA401626500 |
540 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774626621 CA8862677 COSM986194 |
540 | G>S | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA401626527 rs1255699497 |
542 | R>T | No |
ClinGen gnomAD |
|
|
rs1567975474 CA401626560 |
544 | N>K | No |
ClinGen Ensembl |
|
|
CA295267806 rs981956963 |
544 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1186537174 CA401626599 |
547 | L>P | No |
ClinGen gnomAD |
|
|
CA401626627 rs1449581102 |
550 | S>G | No |
ClinGen gnomAD |
|
|
CA295267809 rs933127849 |
550 | S>T | No |
ClinGen Ensembl |
|
|
rs762572482 CA8862705 |
552 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA295272044 rs758000162 |
555 | G>S | No |
ClinGen Ensembl |
|
|
rs1434799252 CA401628081 |
555 | G>V | No |
ClinGen TOPMed |
|
|
rs773861220 CA8862707 |
558 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761241400 CA8862708 |
559 | Y>F | No |
ClinGen ExAC |
|
|
rs372480807 CA8862709 |
560 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1599370756 CA401628138 |
560 | T>P | No |
ClinGen Ensembl |
|
|
rs1250694288 CA401628168 |
562 | P>L | No |
ClinGen gnomAD |
|
| TCGA novel | 563 | M>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1395649309 CA401628189 |
564 | I>V | No |
ClinGen gnomAD |
|
|
CA295272059 rs766250243 |
565 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8862711 rs556195168 |
565 | D>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs145180850 CA8862714 |
567 | L>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs962304076 CA295272086 |
570 | M>K | No |
ClinGen TOPMed |
|
|
rs752766109 CA401628268 |
570 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs752766109 CA8862716 |
570 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs758413695 CA401628288 |
571 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1344519312 CA401628309 |
572 | I>M | No |
ClinGen TOPMed |
|
|
rs777977111 CA8862718 |
572 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1459567747 CA401628297 |
572 | I>V | No |
ClinGen gnomAD |
|
|
rs541812308 CA8862719 |
573 | S>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs771477529 CA8862720 |
574 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1395206096 CA401628410 |
577 | G>E | No |
ClinGen gnomAD |
|
|
rs781496274 CA8862721 |
577 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1247926834 CA401629888 |
578 | V>I | No |
ClinGen gnomAD |
|
|
rs761639016 CA295277507 |
579 | I>T | No |
ClinGen Ensembl |
|
|
CA8862744 rs770137069 |
580 | R>* | No |
ClinGen ExAC gnomAD |
|
|
RCV000440754 rs780523169 CA8862745 |
580 | R>Q | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs1448430753 CA401629943 |
581 | E>Q | No |
ClinGen TOPMed |
|
|
rs747729228 CA8862746 |
584 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs915544729 CA295277512 |
585 | R>K | No |
ClinGen TOPMed |
|
|
rs770937552 CA8862750 |
588 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs776716963 CA8862751 |
589 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs1319849132 CA401630102 |
589 | N>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1436714253 CA401630149 |
592 | Q>R | No |
ClinGen gnomAD |
|
|
rs1270211817 CA401630201 |
594 | A>S | No |
ClinGen gnomAD |
|
|
CA8862753 rs764929196 |
596 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs973320649 CA295277538 |
597 | F>I | No |
ClinGen Ensembl |
|
|
rs377718092 CA8862755 |
599 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1047593267 CA295277548 |
600 | T>M | No |
ClinGen gnomAD |
|
|
CA8862791 rs749249997 |
604 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs575721383 CA8862789 |
604 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8862790 rs575721383 |
604 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8862793 rs774177848 |
607 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA8862795 rs372610438 |
609 | M>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8862794 rs761990282 |
609 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1227722857 CA401631087 |
611 | L>V | No |
ClinGen gnomAD |
|
|
CA401631097 rs1376777361 |
612 | S>C | No |
ClinGen TOPMed |
|
|
rs1249900680 CA401631101 |
612 | S>N | No |
ClinGen gnomAD |
|
|
CA8862797 rs760825079 |
613 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA8862798 rs201871480 |
614 | D>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1277603084 CA401631134 |
615 | L>I | No |
ClinGen gnomAD |
|
|
CA8862801 rs765676190 |
617 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs2292971 CA8862800 VAR_057264 |
617 | M>T | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs982167851 CA295278750 |
620 | G>E | No |
ClinGen Ensembl |
|
|
CA295278751 rs201176158 |
621 | S>* | No |
ClinGen gnomAD |
|
|
CA401631213 rs201176158 |
621 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1260787757 CA401631216 |
622 | I>S | No |
ClinGen gnomAD |
|
|
rs199609098 CA8862804 |
622 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8862806 rs755644968 |
624 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1014416756 CA295278758 |
625 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA8862808 rs749225304 |
626 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs984046914 CA295278766 |
629 | A>V | No |
ClinGen Ensembl |
|
|
rs1293440048 CA401631271 |
631 | A>S | No |
ClinGen gnomAD |
|
|
rs1293440048 CA401631269 |
631 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA401631305 rs1274462216 |
636 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA8862812 rs772227859 |
636 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA401631309 rs1205323200 |
637 | A>T | No |
ClinGen gnomAD |
|
|
CA8862813 rs539457901 |
638 | Q>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA401631329 rs760875110 |
639 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA401631326 rs1464338442 |
639 | E>G | No |
ClinGen gnomAD |
|
| rs771033061 | 640 | N>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs745967642 CA8862835 |
641 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs1162673347 CA401631361 |
642 | P>L | No |
ClinGen gnomAD |
|
|
CA401631358 rs1454422819 |
642 | P>S | No |
ClinGen gnomAD |
|
|
rs199679092 CA8862837 |
643 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs368254454 CA8862838 |
644 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401631405 rs1288908162 |
649 | E>A | No |
ClinGen gnomAD |
|
|
rs760331502 CA8862842 COSM1387542 |
649 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA295279716 rs1048133990 |
650 | Q>E | No |
ClinGen TOPMed |
|
| TCGA novel | 651 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8862843 rs765967182 |
652 | V>L | No |
ClinGen ExAC |
|
|
rs907774680 CA295279723 |
653 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1417011439 CA775838292 |
656 | K>S | No |
ClinGen TOPMed |
|
|
CA295279725 rs868043755 |
657 | Q>H | No |
ClinGen Ensembl |
|
|
rs1361179113 CA401631505 |
659 | H>R | No |
ClinGen gnomAD |
|
|
rs1019781266 CA295279730 |
660 | Q>* | No |
ClinGen gnomAD |
|
|
rs753327888 CA8862844 |
660 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401631644 rs1284143195 |
662 | L>F | No |
ClinGen gnomAD |
|
|
CA8862865 rs368782592 COSM273616 |
665 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8862866 rs371761720 |
665 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs368782592 CA401631686 |
665 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA295280402 rs978785596 |
666 | Q>* | No |
ClinGen Ensembl |
|
|
CA8862867 rs752247399 |
667 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1157970091 CA401631734 |
669 | R>G | No |
ClinGen gnomAD |
|
|
rs772313999 CA8862880 |
672 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs769468107 CA8862883 |
674 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA401632607 rs1194891788 |
680 | V>G | No |
ClinGen gnomAD |
|
|
rs1179260365 CA401632613 |
681 | C>F | No |
ClinGen gnomAD |
|
|
CA401632609 rs1479649195 |
681 | C>G | No |
ClinGen gnomAD |
|
|
CA295292846 rs182370230 |
682 | V>F | No |
ClinGen gnomAD |
|
|
rs182370230 CA401632616 |
682 | V>I | No |
ClinGen gnomAD |
|
| TCGA novel | 682 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401632627 rs1387455625 |
683 | L>F | No |
ClinGen gnomAD |
|
|
CA401632630 rs1599563498 |
684 | I>L | No |
ClinGen Ensembl |
|
|
rs1568044300 TCGA novel CA913190545 RCV000762221 |
685 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ClinVar Ensembl dbSNP NCI-TCGA |
|
CA295292850 rs1054991524 |
685 | E>K | No |
ClinGen Ensembl |
|
|
CA401632673 rs1343449596 |
690 | S>C | No |
ClinGen gnomAD |
|
|
rs201988307 CA8862932 |
691 | K>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA401632707 rs1335041257 |
695 | R>K | No |
ClinGen gnomAD |
|
|
CA401632716 rs1284474521 |
696 | G>V | No |
ClinGen gnomAD |
|
|
rs1286740611 CA401632735 |
699 | V>A | No |
ClinGen TOPMed |
|
|
COSM986196 CA8862934 rs368050308 |
699 | V>I | endometrium [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA8862935 rs760748975 |
700 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1209929868 CA401632744 |
701 | D>H | No |
ClinGen gnomAD |
|
|
rs754528442 CA8862949 |
702 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA |
|
rs372379384 CA295293741 |
704 | Q>R | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1472771732 CA401632809 |
708 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA401632818 rs1244598912 |
709 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs772908058 CA295293751 |
709 | D>Y | No |
ClinGen Ensembl |
|
|
rs1312478686 CA401632824 |
710 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA8862951 rs200903034 |
713 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401632854 rs1299913741 |
715 | H>Y | No |
ClinGen TOPMed |
|
|
CA401632862 rs1240564326 |
716 | L>F | No |
ClinGen gnomAD |
|
|
CA401632882 rs1183005673 |
719 | S>G | No |
ClinGen gnomAD |
|
|
rs1599571837 CA401632891 |
720 | H>P | No |
ClinGen Ensembl |
|
| TCGA novel | 720 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8862956 rs548213550 |
722 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8862957 rs759389497 COSM273569 |
722 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs759389497 CA401632904 |
722 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs548213550 CA8862955 |
722 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs765309932 CA8862958 |
723 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA401632953 rs1197265622 |
727 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
rs575904606 CA295295613 |
728 | A>V | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA8862986 rs370377063 |
731 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8862987 rs754287863 |
733 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA295295628 rs865957812 |
734 | A>D | No |
ClinGen Ensembl |
|
|
rs1404719840 CA401632998 |
735 | A>V | No |
ClinGen gnomAD |
|
|
rs1281999052 CA401633000 |
736 | L>V | No |
ClinGen gnomAD |
|
|
CA295295641 rs187738824 |
737 | C>F | No |
ClinGen Ensembl |
|
|
rs777586006 CA401633011 |
738 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777586006 CA8862989 |
738 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs543329891 CA8862990 |
739 | E>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1240827256 CA401633019 |
739 | E>Q | No |
ClinGen TOPMed |
|
|
CA401633088 rs1287005150 |
742 | M>T | No |
ClinGen gnomAD |
|
|
rs780626975 CA8862992 |
742 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1490141493 CA401633128 |
744 | E>D | No |
ClinGen gnomAD |
|
|
rs193159546 CA8862993 |
745 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 745 | P>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs193159546 CA401633136 |
745 | P>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8862995 rs377517399 |
746 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8862996 rs749093541 |
746 | G>V | No |
ClinGen ExAC |
|
|
CA295295694 rs377517399 |
746 | G>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401633148 rs34791072 |
747 | E>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs372679788 CA8862998 |
748 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA401633184 rs749237672 |
749 | D>E | No |
ClinGen TOPMed |
|
|
rs1440966994 CA401633172 |
749 | D>N | No |
ClinGen gnomAD |
|
|
CA401633188 rs1337403280 |
750 | P>T | No |
ClinGen TOPMed |
|
|
CA8863000 COSM1228641 rs772167347 |
751 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1424440817 CA401633213 |
752 | I>V | No |
ClinGen gnomAD |
|
|
CA295296810 rs867894238 |
754 | E>D | No |
ClinGen Ensembl |
|
|
rs1449093177 CA401633257 |
755 | E>A | No |
ClinGen gnomAD |
|
|
CA401633263 rs1211207561 |
756 | L>V | No |
ClinGen TOPMed |
|
|
rs1265016412 CA401633268 |
757 | I>V | No |
ClinGen gnomAD |
|
|
rs1382341570 CA401633275 |
758 | T>A | No |
ClinGen gnomAD |
|
|
rs1286145290 CA401633280 |
759 | Q>E | No |
ClinGen gnomAD |
|
|
rs1286145290 CA401633279 |
759 | Q>K | No |
ClinGen gnomAD |
|
|
CA8863013 rs749289741 |
759 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA295296835 rs957285007 |
762 | A>G | No |
ClinGen TOPMed |
|
|
rs748368158 CA8863016 |
765 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs547091970 CA8863015 |
765 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401633359 rs1247310580 |
767 | P>L | No |
ClinGen gnomAD |
|
| TCGA novel | 767 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 768 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs773297162 CA8863018 |
768 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs948837196 CA295296865 |
768 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1473338232 CA401633386 |
769 | E>V | No |
ClinGen gnomAD |
|
|
CA401633398 rs1167633823 |
770 | M>V | No |
ClinGen gnomAD |
|
|
CA401633414 rs1422145574 |
771 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA401633435 rs1405494641 |
772 | R>L | No |
ClinGen gnomAD |
|
|
CA401633443 rs1336464142 |
773 | C>Y | No |
ClinGen gnomAD |
|
|
rs1341238774 CA401633464 |
774 | G>V | No |
ClinGen gnomAD |
|
|
CA295296913 rs866388240 |
781 | A>D | No |
ClinGen Ensembl |
|
|
rs765676218 CA8863023 |
781 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1278894404 CA401633583 |
784 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA401633617 rs1254622271 |
787 | L>M | No |
ClinGen TOPMed |
|
|
CA295296916 rs753415681 |
789 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs761476887 CA8863026 |
790 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs761476887 CA8863025 |
790 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA8863024 rs200557085 |
790 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA401633661 rs1260113269 |
791 | L>F | No |
ClinGen TOPMed |
|
|
CA401633673 rs1568057885 |
792 | Q>* | No |
ClinGen Ensembl |
|
|
CA295296945 rs761385056 |
793 | Q>K | No |
ClinGen Ensembl |
|
|
CA401633799 rs1369813477 |
794 | V>A | No |
ClinGen gnomAD |
|
|
COSM1228640 CA295298241 rs996140147 |
794 | V>I | large_intestine [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs763230182 CA8863042 |
795 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1334730678 CA401633809 |
796 | T>I | No |
ClinGen gnomAD |
|
|
rs769131046 CA8863043 |
798 | L>* | No |
ClinGen ExAC gnomAD |
|
|
rs1166096282 CA401633836 |
800 | A>V | No |
ClinGen gnomAD |
|
|
rs1355858180 CA401633837 |
801 | V>I | No |
ClinGen TOPMed |
|
|
rs1163912954 CA401633851 |
803 | H>Y | No |
ClinGen Ensembl |
|
|
CA401633862 rs1568062830 |
804 | T>I | No |
ClinGen Ensembl |
|
|
CA8863044 rs772726109 |
806 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401633870 rs772726109 |
806 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199644299 CA8863047 |
807 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8863049 rs534429525 |
809 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8863051 rs758127032 |
812 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA8863053 rs751710020 |
815 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8863056 rs199984036 |
818 | G>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs199984036 CA8863055 |
818 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs770355151 CA8863057 |
821 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8863058 rs780416845 |
822 | I>T | No |
ClinGen ExAC gnomAD |
|
| rs774817806 | 823 | A>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs749860401 CA8863060 |
823 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749860401 COSM986200 CA8863059 |
823 | A>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1484337437 CA401634014 |
826 | C>F | No |
ClinGen gnomAD |
|
|
rs767474574 CA8863092 |
827 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401634024 rs1465658987 |
827 | Q>H | No |
ClinGen gnomAD |
|
|
rs1424176453 CA401634038 |
830 | G>S | No |
ClinGen gnomAD |
|
|
CA295299026 rs767312384 |
831 | V>L | No |
ClinGen gnomAD |
|
| TCGA novel | 833 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA295299031 rs894449778 |
837 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
rs755381482 CA8863097 |
838 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs748722419 CA8863099 |
839 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs779481476 CA8863098 |
839 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA295299048 rs182107545 |
840 | V>M | No |
ClinGen 1000Genomes |
|
|
CA8863102 CA8863101 rs375752538 |
842 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs748846617 CA8863105 |
843 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs774817902 CA8863104 |
843 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769521593 CA401634116 |
843 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs769521593 CA8863103 |
843 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA401634129 rs1285577474 |
845 | V>I | No |
ClinGen gnomAD |
|
|
CA401634150 rs1487191776 |
848 | I>V | No |
ClinGen gnomAD |
|
|
CA401634165 rs1218431713 |
850 | C>R | No |
ClinGen gnomAD |
|
|
CA8863106 rs189096321 |
850 | C>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8863107 rs774414076 |
851 | A>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 854 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401634191 rs1433258753 |
854 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
CA401634193 rs1378038149 |
855 | C>G | No |
ClinGen gnomAD |
|
|
CA401634192 rs1378038149 |
855 | C>R | No |
ClinGen gnomAD |
|
| TCGA novel | 856 | M>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8863113 rs753791614 |
858 | D>E | No |
ClinGen ExAC gnomAD |
|
|
RCV001048414 rs766636782 CA8863112 |
858 | D>N | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA295299099 rs201245699 |
859 | Y>C | No |
ClinGen 1000Genomes |
|
|
CA295299104 rs1007785642 |
860 | T>A | No |
ClinGen TOPMed |
|
|
rs1369909567 CA401634232 |
860 | T>S | No |
ClinGen gnomAD |
|
|
CA8863115 rs370658754 COSM1387543 |
861 | T>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs370658754 CA8863116 |
861 | T>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs11550064 CA295299112 |
864 | R>I | No |
ClinGen Ensembl |
|
|
rs1242076150 CA401634263 |
865 | G>E | No |
ClinGen gnomAD |
|
|
rs778076124 CA8863118 |
866 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA295299132 rs745652302 |
867 | V>A | No |
ClinGen Ensembl |
|
|
CA8863120 rs755667871 |
867 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs972563450 CA295299935 |
872 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs972563450 CA401634317 |
872 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA8863161 rs778711320 |
872 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA8863163 rs757970770 |
873 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs777199364 CA8863164 |
873 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA401634333 rs1336369381 |
875 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA401634332 rs1336369381 |
875 | A>T | Variant assessed as Somatic; 0.0001885 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA8863167 rs780995488 |
876 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA8863166 rs757174598 |
876 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs745667667 CA8863168 |
877 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs1233833575 CA401634346 |
877 | T>S | No |
ClinGen gnomAD |
|
|
rs543770055 CA8863169 |
878 | S>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8863170 rs775688321 |
879 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA8863171 rs199972447 |
880 | M>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401634375 rs1201886949 |
881 | D>E | No |
ClinGen gnomAD |
|
|
CA8863172 rs768689044 |
881 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1278874128 CA401634376 |
882 | L>M | No |
ClinGen gnomAD |
|
|
rs202134464 CA8863173 |
884 | L>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs985138639 CA295299963 |
886 | L>V | No |
ClinGen Ensembl |
|
|
CA401634402 rs1261694214 |
887 | A>T | No |
ClinGen gnomAD |
|
|
CA401634406 rs1226057507 |
887 | A>V | No |
ClinGen TOPMed |
|
|
rs761114963 CA8863178 |
888 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761114963 CA8863177 |
888 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8863175 rs767921790 |
888 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752376573 CA8863179 |
889 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758167016 CA401634423 |
890 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs763620900 CA8863181 |
891 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs751053770 CA8863182 |
893 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs781001003 CA8863184 |
895 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1301891763 CA401634452 |
895 | E>V | No |
ClinGen TOPMed |
|
|
rs1322803482 CA401634459 |
896 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs990241186 CA295300025 |
896 | A>T | No |
ClinGen gnomAD |
|
|
CA401634457 rs1322803482 |
896 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA8863186 rs375374940 |
898 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs375374940 CA295300032 |
898 | T>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs778041055 CA8863213 COSM986202 |
901 | R>C | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1312399549 CA401634502 |
901 | R>H | No |
ClinGen gnomAD |
|
|
rs778041055 CA401634500 |
901 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1335647744 CA401634505 |
902 | I>L | No |
ClinGen TOPMed |
|
|
rs1335647744 CA401634506 |
902 | I>V | No |
ClinGen TOPMed |
|
|
CA8863215 rs771587703 |
903 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs934503914 CA295301077 |
903 | M>V | No |
ClinGen TOPMed |
|
|
CA295301088 rs968708253 |
905 | C>R | No |
ClinGen Ensembl |
|
|
CA295301089 rs977637915 |
906 | V>M | No |
ClinGen Ensembl |
|
|
rs199509385 CA8863217 |
907 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs770264615 CA8863218 |
908 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 909 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401634555 rs1253330383 |
909 | Q>R | No |
ClinGen gnomAD |
|
|
CA401634593 rs1481053701 |
914 | I>T | No |
ClinGen gnomAD |
|
|
CA401634600 rs1200068794 |
915 | D>G | No |
ClinGen gnomAD |
|
|
CA8863220 rs761578299 |
916 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8863222 rs766894924 |
916 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766894924 CA8863221 |
916 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1422765982 CA401634617 |
918 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA295301107 rs760545140 |
918 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA8863223 rs760545140 |
918 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA401634619 rs1172147337 |
919 | A>T | No |
ClinGen gnomAD |
|
|
CA401634624 rs1354779838 |
919 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA8863224 rs766308186 |
920 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752832801 CA8863228 |
922 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs3214033 CA8863229 VAR_057265 |
923 | S>N | No |
ClinGen UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
CA8863231 rs374323372 |
924 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA401634654 rs1308121286 |
925 | F>L | No |
ClinGen gnomAD |
|
|
CA401634659 rs1407041601 |
925 | F>L | No |
ClinGen Ensembl |
|
|
rs377731369 CA8863232 |
925 | F>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370298242 CA8863233 |
927 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs746447078 CA8863234 |
928 | L>H | No |
ClinGen ExAC gnomAD |
|
|
rs1487242278 CA401634716 |
934 | P>L | No |
ClinGen gnomAD |
|
|
rs771721082 CA8863238 |
935 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA8863237 rs761320958 |
935 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA401634734 rs772639597 |
938 | H>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8863239 rs772639597 |
938 | H>N | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 938 | H>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401634733 rs772639597 |
938 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs368003256 CA8863241 |
939 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8863242 rs753751532 |
941 | H>Y | No |
ClinGen ExAC |
|
|
COSM265426 rs759557110 CA8863243 |
942 | R>* | lung Variant assessed as Somatic; 0.0 impact. large_intestine [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA |
|
rs1056577423 CA295301235 |
942 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA401634764 rs8072406 |
943 | G>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
RCV000964020 VAR_057266 rs8072406 CA8863244 |
943 | G>V | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs752561485 CA8863245 |
946 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA8863248 rs764417557 |
949 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757402099 CA8863249 |
950 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA401634839 rs1295047649 |
953 | D>G | No |
ClinGen gnomAD |
|
|
rs762065623 CA8863286 |
953 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401634845 rs1197393364 |
954 | V>M | No |
ClinGen gnomAD |
|
|
CA8863288 rs376859570 |
955 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8863289 COSM1720647 rs567316358 |
956 | S>F | NS [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA401634863 rs1307531655 |
957 | V>A | No |
ClinGen TOPMed |
|
|
rs1466348816 CA401634878 |
959 | W>* | No |
ClinGen gnomAD |
|
|
rs369416847 CA295301434 |
959 | W>R | No |
ClinGen ESP gnomAD |
|
|
CA401634889 rs1420582697 |
961 | A>T | No |
ClinGen gnomAD |
|
|
rs1475591237 CA401634894 |
961 | A>V | No |
ClinGen gnomAD |
|
|
rs755509549 CA8863292 |
962 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401634903 rs1360346084 |
963 | S>Y | No |
ClinGen TOPMed |
|
|
rs929079179 CA295301454 |
964 | Q>H | No |
ClinGen Ensembl |
|
|
CA401634913 rs779200856 |
965 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs779200856 CA8863293 |
965 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1329777087 CA401634916 |
965 | A>V | No |
ClinGen gnomAD |
|
|
CA401634924 rs1358431213 |
966 | F>L | No |
ClinGen gnomAD |
|
|
rs1277885303 CA401634927 |
967 | P>A | No |
ClinGen TOPMed |
|
|
CA295301478 rs926584346 |
967 | P>R | No |
ClinGen TOPMed |
|
|
RCV000885689 rs181489692 CA8863294 |
968 | R>C | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs374267988 CA8863295 |
968 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1267938540 CA401634953 |
971 | Q>H | No |
ClinGen gnomAD |
|
|
CA8863296 rs780895194 |
971 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769933604 CA295301512 |
974 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA8863300 rs779473967 |
977 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8863299 rs779473967 |
977 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8863301 rs768723646 |
979 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774219082 CA8863302 |
979 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA8863303 rs761693555 |
980 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs760846090 CA8863306 |
982 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA401635031 rs1234073068 |
985 | G>R | No |
ClinGen TOPMed |
|
|
CA295301562 rs749368627 |
986 | L>P | No |
ClinGen Ensembl |
|
|
rs1021690085 CA295301568 |
988 | V>L | No |
ClinGen TOPMed |
|
|
CA401635045 rs1021690085 |
988 | V>M | No |
ClinGen TOPMed |
|
|
CA401635055 rs1432652024 |
989 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1316112591 CA401635067 |
992 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA295301610 rs960069159 |
996 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA8863314 rs750061418 |
997 | T>M | No |
ClinGen ExAC gnomAD |
|
|
CA8863359 rs747027727 |
998 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777568715 CA8863358 |
998 | I>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA295302611 rs898966357 |
998 | I>V | No |
ClinGen TOPMed |
|
|
CA401635119 rs781008283 |
999 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8863362 rs746054218 |
999 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8863361 rs781008283 |
999 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8863363 rs530378018 |
1000 | H>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA401635140 rs1417229963 |
1002 | T>I | No |
ClinGen gnomAD |
|
|
CA401635139 rs1417229963 |
1002 | T>S | No |
ClinGen gnomAD |
|
|
rs368569864 CA8863365 |
1003 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 1003 | Q>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401635144 rs1380543165 |
1003 | Q>R | No |
ClinGen gnomAD |
|
|
CA401635169 rs1274672880 |
1006 | F>L | No |
ClinGen gnomAD |
|
|
CA8863367 rs141474186 |
1007 | E>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA401635173 rs141474186 |
1007 | E>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA295302649 rs932251445 |
1008 | Y>C | No |
ClinGen Ensembl |
|
|
rs762419900 CA8863368 |
1009 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772524048 CA8863369 |
1010 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772524048 CA401635195 |
1010 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401635205 rs1260004785 |
1012 | I>V | No |
ClinGen gnomAD |
|
|
rs375899767 CA401635228 |
1015 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs375899767 CA8863373 |
1015 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8863372 rs375899767 |
1015 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401635235 rs1453475578 |
1016 | P>A | No |
ClinGen gnomAD |
|
|
rs534421330 CA8863374 |
1016 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs751423345 CA8863376 |
1017 | Q>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1018 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8863378 rs780918623 |
1022 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA295302756 rs1013268942 |
1024 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA401635292 rs1440514693 |
1025 | T>A | No |
ClinGen gnomAD |
|
|
CA401635339 rs1234675576 |
1032 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1324047380 CA401635343 |
1032 | D>V | No |
ClinGen Ensembl |
|
|
CA8863385 rs748615072 |
1033 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs537563250 CA8863384 |
1033 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8863383 rs768584060 |
1033 | N>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1037 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401635411 rs767059052 CA8863413 |
1041 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8863414 rs767059052 |
1041 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1426238058 CA401635440 |
1046 | T>A | No |
ClinGen TOPMed |
|
|
COSM1288366 rs541191622 CA8863417 |
1046 | T>M | Variant assessed as Somatic; 0.0 impact. autonomic_ganglia [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
RCV001091549 rs2062306727 |
1049 | H>missing | No |
ClinVar dbSNP |
|
| TCGA novel | 1049 | H>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401635466 rs1270364295 |
1050 | V>E | No |
ClinGen gnomAD |
|
|
CA8863419 rs768705760 |
1050 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1051 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401635473 rs1306136552 |
1051 | L>P | No |
ClinGen gnomAD |
|
|
rs778040959 CA8863422 |
1054 | G>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1259783339 CA401635492 |
1054 | G>D | No |
ClinGen gnomAD |
|
|
COSM986205 rs778040959 CA8863423 |
1054 | G>S | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1473131223 CA401635497 |
1055 | C>S | No |
ClinGen TOPMed gnomAD |
|
|
CA8863424 rs757808218 |
1056 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs746252497 CA8863426 |
1057 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs746252497 CA8863427 |
1057 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA8863429 rs747834755 |
1058 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs577616532 CA8863430 |
1061 | T>M | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA8863436 rs776499062 |
1064 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs766342811 CA8863435 |
1064 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1195217826 CA401635586 |
1066 | P>R | No |
ClinGen gnomAD |
|
|
CA401635600 rs1238729520 |
1068 | A>G | No |
ClinGen TOPMed |
|
|
CA401635598 rs1469606569 |
1068 | A>T | No |
ClinGen gnomAD |
|
|
CA8863463 rs767547153 |
1069 | V>M | No |
ClinGen ExAC gnomAD |
|
|
COSM986207 rs780333606 CA8863466 |
1073 | A>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1384703578 CA401635646 |
1075 | C>W | No |
ClinGen TOPMed |
|
|
CA295282952 rs939610383 |
1076 | K>E | No |
ClinGen Ensembl |
|
| TCGA novel | 1076 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401635654 rs777399611 |
1077 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777399611 CA8863469 |
1077 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
| rs1568097466 | 1078 | E>* | No | Ensembl | |
|
rs1055297447 COSM986208 CA295282974 |
1078 | E>* | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA401635664 rs1475992078 |
1078 | E>G | No |
ClinGen gnomAD |
|
|
rs1302855516 CA401635672 |
1079 | I>T | No |
ClinGen TOPMed |
|
|
rs1420873879 CA401635687 |
1081 | N>S | No |
ClinGen TOPMed |
|
| TCGA novel | 1084 | D>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs530848602 CA8863472 |
1084 | D>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs370829071 CA8863474 |
1085 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8863475 rs769857214 |
1086 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs775364866 CA8863476 |
1087 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA8863477 COSM364434 rs762824588 |
1090 | S>L | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA8863479 rs143784778 RCV000896860 |
1092 | I>M | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs1472653302 CA401635756 |
1092 | I>V | No |
ClinGen gnomAD |
|
|
rs767597705 CA8863481 COSM437856 |
1093 | A>T | breast [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA401635767 rs1489243224 |
1094 | V>A | No |
ClinGen TOPMed |
|
|
rs750477411 CA8863482 |
1094 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA295283885 rs12450314 |
1095 | F>L | No |
ClinGen Ensembl |
|
|
rs780202280 CA8863561 |
1096 | C>F | No |
ClinGen ExAC gnomAD |
|
|
CA401636037 rs376721612 |
1096 | C>W | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs3785522 CA401636040 |
1097 | E>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8863563 rs3785522 |
1097 | E>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs749694857 CA8863562 |
1097 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401636041 rs3785522 |
1097 | E>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA401636069 rs1347970204 |
1101 | F>L | No |
ClinGen gnomAD |
|
|
CA401636073 rs1203890938 |
1101 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1378473174 CA401636076 |
1102 | P>A | No |
ClinGen TOPMed |
|
|
CA8863564 rs775057996 |
1102 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8863569 CA8863570 rs200708068 |
1104 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs372479408 CA8863568 |
1104 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA401636086 rs372479408 |
1104 | D>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA401636104 rs995738015 |
1107 | R>K | No |
ClinGen gnomAD |
|
|
CA295284020 rs995738015 |
1107 | R>T | No |
ClinGen gnomAD |
|
|
CA8863573 rs751563583 |
1109 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA8863575 rs767347084 |
1112 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs1599721031 CA401636149 |
1114 | C>F | No |
ClinGen Ensembl |
|
|
rs1239264298 CA401636159 |
1116 | L>F | No |
ClinGen gnomAD |
|
|
rs1388100327 CA401636180 |
1119 | H>P | No |
ClinGen gnomAD |
|
|
rs1388100327 CA401636181 |
1119 | H>R | No |
ClinGen gnomAD |
|
|
CA8863578 rs533459814 |
1120 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs749377554 CA8863579 |
1120 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754043602 CA8863617 |
1125 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA295285604 rs1027222936 |
1125 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA401636607 rs1599734789 |
1126 | K>N | No |
ClinGen Ensembl |
|
|
CA401636614 rs1385408684 |
1127 | T>N | No |
ClinGen gnomAD |
|
|
rs1326153990 CA401636620 |
1128 | T>M | No |
ClinGen gnomAD |
|
|
rs765341711 CA8863619 |
1130 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs765341711 CA401636631 |
1130 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA401636642 rs1555672174 |
1132 | V>M | No |
ClinGen Ensembl |
|
|
rs192624334 CA295285617 |
1133 | Y>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs778338967 CA8863623 |
1134 | E>Q | No |
ClinGen ExAC |
|
|
rs752045662 CA8863624 |
1137 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1004786689 CA295285638 |
1138 | T>N | No |
ClinGen Ensembl |
|
|
rs1156739534 CA401636694 |
1140 | S>G | No |
ClinGen TOPMed |
|
|
rs1456477926 CA401636696 |
1140 | S>N | No |
ClinGen TOPMed |
|
|
rs1290288115 CA401636707 |
1141 | D>E | No |
ClinGen gnomAD |
|
|
CA8863625 rs757618357 |
1142 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1253351182 CA401636714 |
1143 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA401636716 rs1253351182 |
1143 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA8863627 rs748897905 |
1144 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747657263 CA401636727 |
1145 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778597687 CA8863629 |
1145 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8863630 rs747657263 |
1145 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401636733 rs1391886799 |
1146 | D>G | No |
ClinGen gnomAD |
|
|
CA401636755 rs183455339 |
1149 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA401636756 rs1394714125 |
1150 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA8863633 rs570910494 |
1151 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770722219 CA8863634 |
1153 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA8863635 rs776572359 |
1154 | V>M | No |
ClinGen ExAC |
|
|
CA8863636 rs759776213 |
1155 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8863637 rs375065191 |
1159 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA401636817 rs1568106593 COSM365931 |
1160 | W>R | lung [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs752306725 CA8863670 |
1161 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777282071 CA8863672 |
1162 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs372662619 CA8863673 |
1162 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA295287743 rs923773324 |
1164 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA401636862 rs1326695955 |
1165 | A>T | No |
ClinGen gnomAD |
|
|
rs369383204 CA8863675 |
1165 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs373569797 CA8863676 |
1168 | R>* | No |
ClinGen ESP ExAC gnomAD |
|
|
CA295287754 rs376595024 |
1169 | E>A | No |
ClinGen Ensembl |
|
|
CA8863677 rs555409758 |
1169 | E>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA401636898 rs1568114230 |
1170 | Q>H | No |
ClinGen Ensembl |
|
|
CA8863680 rs775453008 |
1171 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8863681 rs376677304 |
1173 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV000893316 rs188081246 CA8863682 |
1173 | R>H | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA401636938 rs1161554283 |
1177 | L>F | No |
ClinGen gnomAD |
|
|
rs773665099 CA8863685 |
1181 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1291743892 CA401636960 |
1181 | P>S | No |
ClinGen gnomAD |
|
|
rs980537121 CA295287788 |
1182 | R>S | No |
ClinGen TOPMed |
|
|
CA8863686 rs761205495 |
1183 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8863688 COSM1189634 rs754168355 |
1184 | Q>* | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA401636976 rs1229868698 |
1184 | Q>P | No |
ClinGen gnomAD |
|
|
rs2292969 CA8863689 RCV000881061 VAR_057267 |
1185 | L>P | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs527306723 CA295287802 |
1185 | L>V | No |
ClinGen Ensembl |
|
|
CA401636991 rs1264029414 |
1187 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1264029414 CA401636990 |
1187 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA8863691 rs780053410 |
1188 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401637001 rs1251182398 |
1188 | Q>H | No |
ClinGen gnomAD |
|
|
CA8863719 rs368769893 |
1189 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1162058241 CA401637024 |
1190 | G>D | No |
ClinGen TOPMed |
|
| TCGA novel | 1190 | G>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
1 associated diseases with Q9BTW9
[MIM: 617193]: Encephalopathy, progressive, early-onset, with brain atrophy and thin corpus callosum (PEBAT)
An autosomal recessive disease with neurodevelopmental and neurodegenerative features. PEBAT is characterized by early-onset cortical atrophy, hypomyelination, microcephaly, thin corpus callosum, delayed psychomotor development, developmental regression, intellectual disability, seizures, optic atrophy, muscle weakness and atrophy, spastic quadriplegia, and respiratory insufficiency due to hypotonia. {ECO:0000269|PubMed:27666370, ECO:0000269|PubMed:27666374, ECO:0000269|PubMed:27807845, ECO:0000269|PubMed:28158450}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- An autosomal recessive disease with neurodevelopmental and neurodegenerative features. PEBAT is characterized by early-onset cortical atrophy, hypomyelination, microcephaly, thin corpus callosum, delayed psychomotor development, developmental regression, intellectual disability, seizures, optic atrophy, muscle weakness and atrophy, spastic quadriplegia, and respiratory insufficiency due to hypotonia. {ECO:0000269|PubMed:27666370, ECO:0000269|PubMed:27666374, ECO:0000269|PubMed:27807845, ECO:0000269|PubMed:28158450}. Note=The disease is caused by variants affecting the gene represented in this entry.
1 regional properties for Q9BTW9
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Tubulin-specific chaperone D, C-terminal | 901 - 1087 | IPR022577 |
Functions
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| adherens junction | A cell-cell junction composed of the epithelial cadherin-catenin complex. The epithelial cadherins, or E-cadherins, of each interacting cell extend through the plasma membrane into the extracellular space and bind to each other. The E-cadherins bind to catenins on the cytoplasmic side of the membrane, where the E-cadherin-catenin complex binds to cytoskeletal components and regulatory and signaling molecules. |
| bicellular tight junction | An occluding cell-cell junction that is composed of a branching network of sealing strands that completely encircles the apical end of each cell in an epithelial sheet; the outer leaflets of the two interacting plasma membranes are seen to be tightly apposed where sealing strands are present. Each sealing strand is composed of a long row of transmembrane adhesion proteins embedded in each of the two interacting plasma membranes. |
| centrosome | A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle. |
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| lateral plasma membrane | The portion of the plasma membrane at the lateral side of the cell. In epithelial cells, lateral plasma membranes are on the sides of cells which lie at the interface of adjacent cells. |
| microtubule | Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| beta-tubulin binding | Binding to the microtubule constituent protein beta-tubulin. |
| chaperone binding | Binding to a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport. |
| GTPase activator activity | Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP. |
10 GO annotations of biological process
| Name | Definition |
|---|---|
| adherens junction assembly | The aggregation, arrangement and bonding together of a set of components to form an adherens junction. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments. |
| bicellular tight junction assembly | The aggregation, arrangement and bonding together of a set of components to form a tight junction, an occluding cell-cell junction that is composed of a branching network of sealing strands that completely encircles the apical end of each cell in an epithelial sheet. |
| cell morphogenesis involved in neuron differentiation | The process in which the structures of a neuron are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a neuron. |
| microtubule cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins. |
| mitotic cell cycle | Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent. |
| negative regulation of cell-substrate adhesion | Any process that decreases the frequency, rate or extent of cell-substrate adhesion. Cell-substrate adhesion is the attachment of a cell to the underlying substrate via adhesion molecules. |
| negative regulation of microtubule polymerization | Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule polymerization. |
| post-chaperonin tubulin folding pathway | Completion of folding of alpha- and beta-tubulin; takes place subsequent to chaperonin-mediated partial folding; mediated by a complex of folding cofactors. |
| protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. |
| tubulin complex assembly | The aggregation and bonding together of alpha- and beta-tubulin to form a tubulin heterodimer. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MALSDEPAAG | GPEEEAEDET | LAFGAALEAF | GESAETRALL | GRLREVHGGG | AEREVALERF |
| 70 | 80 | 90 | 100 | 110 | 120 |
| RVIMDKYQEQ | PHLLDPHLEW | MMNLLLDIVQ | DQTSPASLVH | LAFKFLYIIT | KVRGYKTFLR |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LFPHEVADVE | PVLDLVTIQN | PKDHEAWETR | YMLLLWLSVT | CLIPFDFSRL | DGNLLTQPGQ |
| 190 | 200 | 210 | 220 | 230 | 240 |
| ARMSIMDRIL | QIAESYLIVS | DKARDAAAVL | VSRFITRPDV | KQSKMAEFLD | WSLCNLARSS |
| 250 | 260 | 270 | 280 | 290 | 300 |
| FQTMQGVITM | DGTLQALAQI | FKHGKREDCL | PYAATVLRCL | DGCRLPESNQ | TLLRKLGVKL |
| 310 | 320 | 330 | 340 | 350 | 360 |
| VQRLGLTFLK | PKVAAWRYQR | GCRSLAANLQ | LLTQGQSEQK | PLILTEDDDE | DDDVPEGVER |
| 370 | 380 | 390 | 400 | 410 | 420 |
| VIEQLLVGLK | DKDTVVRWSA | AKGIGRMAGR | LPRALADDVV | GSVLDCFSFQ | ETDKAWHGGC |
| 430 | 440 | 450 | 460 | 470 | 480 |
| LALAELGRRG | LLLPSRLVDV | VAVILKALTY | DEKRGACSVG | TNVRDAACYV | CWAFARAYEP |
| 490 | 500 | 510 | 520 | 530 | 540 |
| QELKPFVTAI | SSALVIAAVF | DRDINCRRAA | SAAFQENVGR | QGTFPHGIDI | LTTADYFAVG |
| 550 | 560 | 570 | 580 | 590 | 600 |
| NRSNCFLVIS | VFIAGFPEYT | QPMIDHLVTM | KISHWDGVIR | ELAARALHNL | AQQAPEFSAT |
| 610 | 620 | 630 | 640 | 650 | 660 |
| QVFPRLLSMT | LSPDLHMRHG | SILACAEVAY | ALYKLAAQEN | RPVTDHLDEQ | AVQGLKQIHQ |
| 670 | 680 | 690 | 700 | 710 | 720 |
| QLYDRQLYRG | LGGQLMRQAV | CVLIEKLSLS | KMPFRGDTVI | DGWQWLINDT | LRHLHLISSH |
| 730 | 740 | 750 | 760 | 770 | 780 |
| SRQQMKDAAV | SALAALCSEY | YMKEPGEADP | AIQEELITQY | LAELRNPEEM | TRCGFSLALG |
| 790 | 800 | 810 | 820 | 830 | 840 |
| ALPGFLLKGR | LQQVLTGLRA | VTHTSPEDVS | FAESRRDGLK | AIARICQTVG | VKAGAPDEAV |
| 850 | 860 | 870 | 880 | 890 | 900 |
| CGENVSQIYC | ALLGCMDDYT | TDSRGDVGTW | VRKAAMTSLM | DLTLLLARSQ | PELIEAHTCE |
| 910 | 920 | 930 | 940 | 950 | 960 |
| RIMCCVAQQA | SEKIDRFRAH | AASVFLTLLH | FDSPPIPHVP | HRGELEKLFP | RSDVASVNWS |
| 970 | 980 | 990 | 1000 | 1010 | 1020 |
| APSQAFPRIT | QLLGLPTYRY | HVLLGLVVSL | GGLTESTIRH | STQSLFEYMK | GIQSDPQALG |
| 1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
| SFSGTLLQIF | EDNLLNERVS | VPLLKTLDHV | LTHGCFDIFT | TEEDHPFAVK | LLALCKKEIK |
| 1090 | 1100 | 1110 | 1120 | 1130 | 1140 |
| NSKDIQKLLS | GIAVFCEMVQ | FPGDVRRQAL | LQLCLLLCHR | FPLIRKTTAS | QVYETLLTYS |
| 1150 | 1160 | 1170 | 1180 | 1190 | |
| DVVGADVLDE | VVTVLSDTAW | DAELAVVREQ | RNRLCDLLGV | PRPQLVPQPG | AC |