Q96SB8
Gene name |
SMC6 (SMC6L1) |
Protein name |
Structural maintenance of chromosomes protein 6 |
Names |
SMC protein 6, SMC-6, hSMC6 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:79677 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q96SB8
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q96SB8-F1 | Predicted | AlphaFoldDB |
716 variants for Q96SB8
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs1048480359 CA43385471 |
2 | A>S | No |
ClinGen Ensembl |
|
| TCGA novel | 2 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs747459869 CA1540273 |
2 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs780634958 CA1540272 |
3 | K>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 3 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA345925667 rs1474278612 |
6 | E>* | No |
ClinGen gnomAD |
|
|
CA43385456 rs931372463 |
7 | E>* | No |
ClinGen Ensembl |
|
| TCGA novel | 8 | N>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA345925643 rs1572366904 |
9 | F>L | No |
ClinGen Ensembl |
|
|
rs1262059536 CA345925634 |
10 | S>P | No |
ClinGen gnomAD |
|
|
CA345925621 rs1410203327 |
12 | P>S | No |
ClinGen TOPMed |
|
|
rs750693895 CA1540270 |
13 | K>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 14 | N>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1446533648 CA345925597 |
15 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1244218420 CA345925595 |
16 | K>Q | No |
ClinGen gnomAD |
|
|
CA1540268 rs757414392 |
18 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1540269 rs371477087 |
18 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1208733165 CA345925559 |
20 | Q>* | No |
ClinGen gnomAD |
|
|
rs764064850 CA1540266 |
23 | L>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 24 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1540265 rs759585478 |
25 | D>A | No |
ClinGen ExAC gnomAD |
|
|
CA43385411 rs751033165 |
25 | D>N | No |
ClinGen Ensembl |
|
|
CA345925500 rs759585478 |
25 | D>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 26 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA345925483 rs1415611162 |
27 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA43385392 rs376284298 |
30 | G>D | No |
ClinGen ESP TOPMed |
|
|
CA345925427 rs143324489 |
31 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs772884897 CA1540261 |
32 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1485213664 CA345925412 |
33 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA1540260 rs769371653 |
33 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1485213664 CA345925411 |
33 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
rs372359164 COSM1631478 CA345925407 |
34 | E>* | liver [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs372359164 CA1540258 |
34 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1540257 rs768050546 |
36 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA345925384 rs1225160643 |
37 | G>D | No |
ClinGen TOPMed |
|
|
CA1540255 rs780655177 |
37 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA1540254 rs140231302 |
38 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs143978525 CA1540253 |
38 | T>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1558383374 CA345925376 |
39 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA345925372 rs1480650779 |
39 | T>I | No |
ClinGen gnomAD |
|
|
CA345925371 rs1234003672 |
40 | L>M | No |
ClinGen gnomAD |
|
|
CA1540252 rs370626782 |
40 | L>S | No |
ClinGen ESP ExAC gnomAD |
|
|
rs369375763 CA1540229 |
42 | A>E | No |
ClinGen ESP ExAC gnomAD |
|
|
CA345924856 rs1175347184 |
42 | A>T | No |
ClinGen TOPMed |
|
|
CA1540228 rs369375763 |
42 | A>V | No |
ClinGen ESP ExAC gnomAD |
|
|
CA1540227 rs756248994 |
48 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA43382846 rs756248994 |
48 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1453991091 CA345924760 |
50 | S>N | No |
ClinGen gnomAD |
|
|
CA1540226 rs375349809 |
51 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA345924697 rs1156334660 |
55 | N>D | No |
ClinGen gnomAD |
|
|
CA43382813 rs971483502 |
56 | F>L | No |
ClinGen Ensembl |
|
|
CA1540222 CA345924635 rs750358192 |
61 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA1540223 rs758391832 |
61 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1305992969 CA345924621 |
64 | P>T | No |
ClinGen TOPMed |
|
|
rs1486323156 CA345924588 |
68 | G>D | No |
ClinGen gnomAD |
|
|
rs113967991 CA1540217 |
71 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA1540218 rs763583977 |
71 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA1540216 rs775196672 |
72 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1329199652 CA345924553 |
74 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA345924531 rs1382520743 |
77 | N>S | No |
ClinGen gnomAD |
|
|
rs1572353794 CA345923546 |
82 | K>N | No |
ClinGen Ensembl |
|
|
rs1159236308 CA345923531 |
84 | A>V | No |
ClinGen gnomAD |
|
|
rs1572353774 CA345923512 |
88 | A>T | No |
ClinGen Ensembl |
|
| TCGA novel | 91 | V>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA43378699 rs112103259 |
94 | G>D | No |
ClinGen Ensembl |
|
|
CA43378693 rs749243387 |
95 | G>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1540174 rs749243387 |
95 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777466789 CA1540173 |
96 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs755950894 CA345923404 |
101 | N>D | No |
ClinGen ExAC gnomAD |
|
|
COSM1613749 CA1540172 rs755950894 |
101 | N>H | liver [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1219026185 CA345923396 |
101 | N>K | No |
ClinGen gnomAD |
|
|
CA345923387 rs1450699118 |
102 | R>S | No |
ClinGen gnomAD |
|
|
CA345923369 rs1350825371 |
105 | S>C | No |
ClinGen gnomAD |
|
|
CA345923317 rs1307780830 |
112 | D>E | No |
ClinGen gnomAD |
|
|
rs767239421 CA1540170 |
115 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1217867918 CA345921675 |
119 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1454044505 CA345921653 |
121 | I>V | No |
ClinGen gnomAD |
|
| TCGA novel | 126 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1271048758 CA345921533 |
128 | D>H | No |
ClinGen gnomAD |
|
|
CA345921527 rs1402070367 |
128 | D>V | No |
ClinGen gnomAD |
|
|
CA43373805 rs972450482 |
130 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
rs769742706 CA1540154 |
132 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA345921445 rs1360857081 COSM1325744 |
133 | A>T | ovary Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA345921420 rs1173829540 |
134 | S>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA43373800 rs1012257675 |
134 | S>R | No |
ClinGen Ensembl |
|
|
rs747884975 CA1540153 |
135 | V>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 136 | Y>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1476639004 CA345921332 |
140 | I>M | No |
ClinGen gnomAD |
|
|
rs1261949649 CA345921294 |
142 | I>T | No |
ClinGen gnomAD |
|
|
rs751222493 CA1540150 |
145 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs547849967 CA43373782 |
146 | I>S | No |
ClinGen 1000Genomes |
|
|
rs1294248729 CA345921187 |
147 | S>N | No |
ClinGen TOPMed |
|
|
CA1540149 rs201328220 |
147 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA43373748 rs1003651703 |
148 | I>K | No |
ClinGen Ensembl |
|
|
rs1208619260 CA345921077 |
151 | S>T | No |
ClinGen gnomAD |
|
| TCGA novel | 152 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1312044474 CA345921028 |
154 | Y>C | No |
ClinGen gnomAD |
|
|
rs1290946239 CA345920979 |
156 | L>V | No |
ClinGen TOPMed |
|
|
rs1220782032 CA345920964 |
157 | K>Q | No |
ClinGen gnomAD |
|
|
CA345920947 rs1316319845 |
157 | K>R | No |
ClinGen gnomAD |
|
|
rs750920020 CA1540147 |
160 | T>R | No |
ClinGen ExAC gnomAD |
|
|
CA43373114 rs922000952 |
162 | S>C | No |
ClinGen TOPMed |
|
|
CA345920566 CA345920567 rs377163344 |
163 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1540128 rs377163344 |
163 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA345920367 COSM717578 rs1558370701 |
170 | E>D | lung [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
CA1540126 rs749886913 |
172 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs1173718133 CA345920269 |
174 | I>N | No |
ClinGen Ensembl |
|
|
CA345920217 rs1438292770 |
175 | L>R | No |
ClinGen gnomAD |
|
|
CA345920208 rs1245253023 |
176 | D>H | No |
ClinGen gnomAD |
|
| TCGA novel | 180 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1454211031 CA345920086 |
181 | Q>R | No |
ClinGen TOPMed |
|
|
rs756735940 CA1540106 |
185 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs778431860 CA1540107 |
185 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA345919210 rs1384297741 |
186 | V>I | No |
ClinGen gnomAD |
|
|
CA345919071 rs1384917477 |
191 | Q>R | No |
ClinGen gnomAD |
|
|
CA1540105 rs749816499 |
194 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA1540104 rs778211348 |
195 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1422438172 CA345918850 |
199 | Q>R | No |
ClinGen gnomAD |
|
|
CA345918758 rs1175709347 |
201 | K>E | No |
ClinGen gnomAD |
|
|
CA1540103 rs756439440 |
201 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA1540102 rs753047982 |
203 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1540101 rs767761484 |
204 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs991902905 CA43369113 |
205 | D>H | No |
ClinGen Ensembl |
|
|
CA1540099 rs751802647 |
208 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1197614431 CA345918283 |
209 | F>C | No |
ClinGen gnomAD |
|
|
CA1540075 rs765223914 |
213 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA345918212 rs1183982041 |
214 | T>A | No |
ClinGen TOPMed |
|
|
CA1540074 rs760703737 |
214 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs370871668 CA1540072 |
215 | Q>E | No |
ClinGen ESP ExAC gnomAD |
|
|
CA1540070 rs773995930 |
219 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs1428052717 CA345917985 |
226 | I>V | No |
ClinGen TOPMed |
|
|
CA1540067 rs186144384 |
227 | M>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs762580775 CA1540068 |
227 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs769156363 CA1540066 |
228 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1168270068 CA345917917 |
229 | T>A | No |
ClinGen TOPMed |
|
|
rs748740216 CA1540065 |
229 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs781505061 CA1540064 |
231 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA345917754 rs1441379971 |
238 | H>Y | No |
ClinGen gnomAD |
|
|
rs962766065 CA43368314 |
239 | Q>* | No |
ClinGen Ensembl |
|
|
rs940714393 COSM1226838 CA43368288 |
240 | G>R | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
COSM1010020 rs777222919 CA1540046 |
243 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA1540047 rs761159442 |
243 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA345916943 rs1398277814 |
244 | L>F | No |
ClinGen TOPMed |
|
|
CA345916905 rs1346125916 |
245 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA345916911 rs1346125916 |
245 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA345916900 rs1342448308 |
246 | E>K | No |
ClinGen TOPMed |
|
|
rs769232499 CA1540045 |
247 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs373857118 CA1540044 COSM441548 |
249 | R>C | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA1540043 rs780636688 |
249 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs1298903248 CA345916803 |
250 | Q>R | No |
ClinGen gnomAD |
|
|
CA1540042 rs772554984 |
251 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1317526518 CA345916757 |
252 | V>I | No |
ClinGen gnomAD |
|
| TCGA novel | 253 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA345916732 rs922891802 CA43365908 |
253 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1408873053 CA345916735 |
253 | E>G | No |
ClinGen gnomAD |
|
|
CA345916721 rs1170523600 |
254 | K>T | No |
ClinGen TOPMed gnomAD |
|
|
rs778937504 CA1540040 |
255 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs749279007 CA1540038 |
257 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 257 | R>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs777809318 CA1540037 |
257 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1540036 rs754947981 |
261 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs751493871 CA1540035 |
262 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs766218501 CA1540034 |
262 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA345916539 rs1281177819 |
263 | G>D | No |
ClinGen gnomAD |
|
|
CA345916537 COSM247468 rs1281177819 |
263 | G>V | prostate [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1323126241 CA345916491 |
266 | T>K | No |
ClinGen gnomAD |
|
|
CA345916473 rs1220593742 COSM461293 |
267 | M>I | cervix [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA1540033 rs758129811 |
267 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs1338500150 CA345916468 |
268 | K>* | No |
ClinGen gnomAD |
|
|
CA345916428 rs1428308439 |
270 | N>H | No |
ClinGen gnomAD |
|
| TCGA novel | 271 | L>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 273 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs764753490 CA1540031 |
273 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
CA345916340 rs1331975747 |
276 | H>R | No |
ClinGen gnomAD |
|
|
CA345916342 rs1237338507 |
276 | H>Y | No |
ClinGen TOPMed |
|
|
rs761404595 CA1540030 |
277 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA345916302 rs1400628633 |
279 | A>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA345916161 rs1184919402 |
283 | V>I | No |
ClinGen gnomAD |
|
|
CA1540008 rs377589538 |
284 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM258066 rs1237183875 CA345916113 |
285 | E>* | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA1540007 rs768090372 |
287 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA1540006 rs139308239 |
288 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs771321497 CA1540004 |
289 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs373166234 CA1540002 |
291 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs749529414 CA1540003 |
291 | N>S | No |
ClinGen ExAC gnomAD |
|
| VAR_035875 | 292 | A>V | a breast cancer sample; somatic mutation [UniProt] | No | UniProt |
|
CA1540001 rs769866038 |
293 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1477073309 CA345915918 |
294 | R>T | No |
ClinGen TOPMed |
|
|
rs930693474 CA43365696 |
295 | D>N | No |
ClinGen Ensembl |
|
|
rs143491485 CA1539999 |
296 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1539997 rs771948461 |
297 | I>T | No |
ClinGen ExAC |
|
|
rs1374467093 CA345915799 |
299 | I>T | No |
ClinGen gnomAD |
|
|
rs745782612 CA1539996 |
299 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA43365668 rs879014326 |
303 | R>C | No |
ClinGen gnomAD |
|
|
rs369105254 CA1539994 |
303 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 306 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA345915581 rs1424729233 |
308 | D>H | No |
ClinGen gnomAD |
|
|
CA345915525 rs1381647647 |
309 | R>S | No |
ClinGen TOPMed |
|
|
CA345915481 rs1301883713 |
311 | M>K | No |
ClinGen TOPMed |
|
|
rs1379208208 CA345915494 |
311 | M>V | No |
ClinGen gnomAD |
|
|
CA345915438 rs1156427593 |
312 | E>K | No |
ClinGen gnomAD |
|
|
rs756153384 CA43359193 |
316 | V>I | No |
ClinGen Ensembl |
|
|
CA1539978 rs778847739 |
318 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs770666623 CA1539977 |
319 | N>I | No |
ClinGen ExAC gnomAD |
|
|
CA345914260 rs1261054059 |
320 | E>A | No |
ClinGen gnomAD |
|
|
CA1539976 rs749046123 |
320 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1486275118 CA345914241 |
321 | A>V | No |
ClinGen gnomAD |
|
|
rs755873189 CA1539974 |
322 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1255617622 CA345914239 |
322 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1326064960 CA345914202 |
324 | K>N | No |
ClinGen gnomAD |
|
|
rs1231229326 CA345914191 |
325 | Y>* | No |
ClinGen gnomAD |
|
|
CA1539973 rs183894580 |
328 | I>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs780624966 CA1539972 |
331 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs996361426 CA43359109 |
333 | E>K | No |
ClinGen TOPMed |
|
|
rs1339111605 CA345914070 |
334 | K>R | No |
ClinGen gnomAD |
|
|
rs754452106 CA1539971 |
335 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA345914054 rs1558359659 |
335 | I>M | No |
ClinGen Ensembl |
|
|
rs752012081 CA1539970 |
336 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA345913979 rs1467940033 |
341 | A>S | No |
ClinGen gnomAD |
|
|
CA1539969 rs766867799 |
342 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766867799 CA345913971 |
342 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763328076 CA1539968 |
342 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1042145084 CA43359073 |
343 | A>G | No |
ClinGen TOPMed |
|
|
CA43359067 rs753582610 |
346 | C>R | No |
ClinGen Ensembl |
|
|
CA1539966 rs765551125 |
347 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA1539965 rs762086918 |
348 | A>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 348 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs943841187 CA43359046 |
351 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA1539963 rs576133663 |
352 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs375085487 CA1539962 |
355 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1539961 rs200467297 |
358 | R>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1539960 rs200467297 |
358 | R>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs945864382 CA43359034 |
359 | A>T | No |
ClinGen TOPMed |
|
|
CA345913713 rs1280747970 |
360 | Y>* | No |
ClinGen gnomAD |
|
|
rs773207688 CA1539958 |
360 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747932996 CA1539937 |
366 | L>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA345913402 rs1268372497 |
367 | Y>* | No |
ClinGen TOPMed |
|
|
CA1539935 rs371997081 |
367 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA345913386 rs1333728122 COSM1010013 |
369 | R>* | endometrium [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs149967721 CA1539934 |
369 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs149967721 CA345913385 |
369 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs149967721 CA1539933 |
369 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1539932 rs367969244 |
370 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs758369471 CA43357916 COSM1176765 |
373 | E>K | endometrium [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA345913271 rs1454581045 |
374 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA345913275 rs1426610547 |
374 | Y>H | No |
ClinGen gnomAD |
|
|
CA43357914 rs923077003 |
376 | A>G | No |
ClinGen Ensembl |
|
|
CA43357912 rs111857521 |
378 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA1539930 rs779356516 |
380 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA1539929 rs757643474 |
382 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1182998476 CA345913094 |
384 | L>F | No |
ClinGen gnomAD |
|
|
COSM1010011 CA1539927 rs764336831 |
387 | R>* | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs752829737 CA1539926 |
387 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA345913034 rs1400313433 |
389 | E>K | No |
ClinGen gnomAD |
|
|
rs1406085973 CA345913024 |
390 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1039106574 CA43357867 |
394 | S>I | No |
ClinGen TOPMed |
|
| rs761535042 | 394 | S>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA43357651 rs1001721550 |
395 | T>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1281174542 CA345912871 |
395 | T>S | No |
ClinGen gnomAD |
|
|
rs139941542 CA1539905 |
403 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs139941542 CA1539904 |
403 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1539906 rs752968506 |
403 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1379530290 CA345912680 |
404 | L>S | No |
ClinGen TOPMed |
|
|
CA345912659 rs1347092194 |
405 | E>* | No |
ClinGen gnomAD |
|
|
rs751737089 CA1539903 |
405 | E>D | No |
ClinGen ExAC TOPMed |
|
|
CA345912639 rs1319197828 |
406 | R>G | No |
ClinGen gnomAD |
|
|
CA345912620 rs1414155644 |
406 | R>K | No |
ClinGen gnomAD |
|
|
CA345912612 rs1414155644 |
406 | R>T | No |
ClinGen gnomAD |
|
|
CA345912606 rs1404305757 |
407 | Q>K | No |
ClinGen TOPMed gnomAD |
|
|
CA345912588 rs1321468253 |
407 | Q>L | No |
ClinGen TOPMed |
|
| TCGA novel | 409 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs766533057 CA1539902 |
409 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA345912519 rs1558358174 |
410 | I>K | No |
ClinGen Ensembl |
|
|
rs971842913 CA43357627 |
410 | I>L | No |
ClinGen Ensembl |
|
|
rs961902804 CA43357586 |
410 | I>M | No |
ClinGen Ensembl |
|
| rs760667210 | 410 | I>N | Variant assessed as Somatic; 0.0001011 impact. [NCI-TCGA] | No | NCI-TCGA |
| rs760667210 | 410 | I>Y | Variant assessed as Somatic; 0.0004045 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1423534612 CA345912459 |
411 | S>P | No |
ClinGen gnomAD |
|
|
CA345912431 rs1428398377 |
412 | W>S | No |
ClinGen gnomAD |
|
| TCGA novel | 415 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs761874486 CA1539898 |
415 | E>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 419 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1014096304 CA43357571 |
419 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA345912199 rs1243385277 |
419 | A>V | No |
ClinGen gnomAD |
|
|
rs763959426 CA1539896 |
420 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1320524744 CA345912140 |
422 | N>S | No |
ClinGen gnomAD |
|
|
CA1539895 rs760350724 |
423 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA345912035 rs1558358094 |
425 | N>H | No |
ClinGen Ensembl |
|
|
CA1539894 rs144572982 |
426 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA345911970 rs1324081648 |
426 | S>P | No |
ClinGen gnomAD |
|
|
CA345911929 rs1446928738 |
427 | V>G | No |
ClinGen gnomAD |
|
|
CA1539893 rs771763705 |
428 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1169156998 CA345911908 |
429 | Q>E | No |
ClinGen TOPMed |
|
|
rs958888447 CA43357548 |
429 | Q>R | No |
ClinGen gnomAD |
|
|
CA345911842 rs1372259940 |
430 | E>D | No |
ClinGen TOPMed |
|
|
rs199917843 CA1539891 |
431 | I>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs868194373 CA43357541 |
431 | I>S | No |
ClinGen Ensembl |
|
|
CA345911837 rs1447501648 |
431 | I>V | No |
ClinGen gnomAD |
|
|
CA1539890 rs770335677 |
432 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1470499181 CA345911780 |
433 | Q>R | No |
ClinGen gnomAD |
|
|
CA345911660 rs1400089381 |
436 | Q>K | No |
ClinGen gnomAD |
|
|
rs1412161363 CA345911631 |
437 | A>D | No |
ClinGen gnomAD |
|
|
CA1539889 rs749815827 |
437 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA1539888 rs778076544 |
438 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA43357488 rs534834201 |
438 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA345911583 rs1449833163 |
439 | E>D | No |
ClinGen TOPMed |
|
|
rs1244260870 CA345911549 |
441 | D>E | No |
ClinGen gnomAD |
|
|
CA43357468 rs535788427 |
443 | E>G | No |
ClinGen 1000Genomes |
|
|
CA1539887 rs770225535 |
443 | E>K | No |
ClinGen ExAC |
|
|
rs781671714 CA1539885 |
445 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA1539886 rs748474097 |
445 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1461582349 CA345911380 |
448 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA1539866 rs747245558 |
455 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA345910250 rs560144562 |
457 | H>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1539864 rs560144562 |
457 | H>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1539863 rs745986184 |
458 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs1363796244 CA345910210 |
460 | S>R | No |
ClinGen gnomAD |
|
|
rs1303046068 CA345910204 |
461 | Y>C | No |
ClinGen gnomAD |
|
|
CA1539860 VAR_052441 rs35195207 |
464 | R>G | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
| TCGA novel | 465 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA345909981 rs1156565692 |
470 | K>E | No |
ClinGen gnomAD |
|
|
CA345909943 rs1420632950 |
471 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA345909909 rs1460260721 |
472 | S>N | No |
ClinGen TOPMed |
|
|
CA1539857 rs751244792 |
476 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA1539855 rs765897987 |
476 | R>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 478 | K>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1345149552 CA345909799 |
478 | K>E | No |
ClinGen gnomAD |
|
|
rs1301317886 CA345909758 |
479 | R>S | No |
ClinGen gnomAD |
|
|
CA1539852 rs764798796 |
481 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1539850 rs185599983 |
482 | P>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1539849 rs371066120 |
482 | P>L | No |
ClinGen ESP ExAC gnomAD |
|
|
CA43356862 rs185599983 |
482 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1317858763 CA345909720 |
483 | N>H | No |
ClinGen gnomAD |
|
|
CA43356854 rs1036047201 |
484 | V>I | No |
ClinGen Ensembl |
|
|
rs1283073610 CA345909680 |
485 | P>A | No |
ClinGen gnomAD |
|
|
CA345909675 rs1572319422 |
485 | P>Q | No |
ClinGen Ensembl |
|
|
rs113186456 CA43356829 |
488 | L>P | No |
ClinGen Ensembl |
|
|
rs747335279 CA1539848 |
489 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs772226192 CA1539846 |
491 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs772226192 CA1539847 |
491 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs746103024 CA1539845 |
492 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778921110 CA1539844 |
493 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1286724854 CA345909500 |
496 | R>G | No |
ClinGen gnomAD |
|
|
CA1539842 rs748082634 |
497 | Q>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs781069670 CA1539841 |
498 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs1408775484 CA345909447 |
499 | H>Y | No |
ClinGen gnomAD |
|
|
CA43356763 rs981390684 |
502 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs981390684 CA345909388 |
502 | Y>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1048838642 CA43356759 |
505 | V>I | No |
ClinGen Ensembl |
|
|
CA1539823 rs771032216 |
510 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA345909076 rs1172634059 |
511 | C>S | No |
ClinGen TOPMed gnomAD |
|
|
CA345909078 rs1172634059 |
511 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs777807384 CA1539821 |
512 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs202190810 CA1539820 |
515 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs760507314 CA43355723 |
515 | R>W | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 516 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA345908967 rs1244163133 |
516 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1195680636 CA345908916 |
517 | P>T | No |
ClinGen gnomAD |
|
|
rs1249043284 CA345908816 |
522 | A>T | No |
ClinGen gnomAD |
|
|
rs377539566 CA1539818 |
523 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA345908797 rs1313893484 |
524 | E>* | No |
ClinGen gnomAD |
|
|
CA1539816 rs750045170 |
525 | S>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA345908716 rs1390686891 |
527 | L>F | No |
ClinGen gnomAD |
|
|
CA1539813 COSM1010006 rs753442826 |
533 | A>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA43355671 rs1040446623 |
534 | Y>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs908011618 CA43355655 |
537 | H>R | No |
ClinGen gnomAD |
|
|
rs753193321 CA1539810 |
538 | N>I | No |
ClinGen ExAC gnomAD |
|
|
CA345908373 rs753193321 |
538 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1253264818 CA345908301 |
540 | A>D | No |
ClinGen gnomAD |
|
|
CA1539808 rs759905946 |
543 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1243251114 CA345908170 |
544 | V>L | No |
ClinGen gnomAD |
|
|
CA1539807 rs771193533 |
545 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs771193533 CA1539806 |
545 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA345908134 rs1383827124 |
547 | A>S | No |
ClinGen TOPMed |
|
|
CA345908124 rs1368381869 |
547 | A>V | No |
ClinGen gnomAD |
|
|
CA345908115 rs1292872773 |
548 | L>R | No |
ClinGen TOPMed |
|
|
CA1539804 rs145642076 |
550 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 551 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1572316548 CA345908035 |
551 | R>T | No |
ClinGen Ensembl |
|
|
CA1539803 COSM308156 rs769850777 |
553 | Y>C | biliary_tract [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1025757359 CA43355636 |
555 | P>R | No |
ClinGen TOPMed |
|
|
CA1539802 rs746932481 |
556 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs1391717410 CA345907928 |
558 | S>L | No |
ClinGen gnomAD |
|
|
CA345907923 rs1468900060 |
559 | R>Q | No |
ClinGen gnomAD |
|
|
CA1539800 rs771792730 |
559 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs745624947 CA1539799 |
561 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA345907783 rs1487167440 |
568 | R>L | No |
ClinGen TOPMed |
|
|
CA345907786 rs1487167440 |
568 | R>Q | No |
ClinGen TOPMed |
|
|
rs201267935 CA43355607 |
568 | R>W | No |
ClinGen TOPMed |
|
| TCGA novel | 570 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs767430165 CA43355600 |
571 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA1539797 rs192935709 |
571 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA345907728 rs1262295241 |
572 | Y>* | No |
ClinGen TOPMed gnomAD |
|
|
rs753531110 CA1539796 |
572 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA345907717 rs1228867922 |
573 | D>G | No |
ClinGen gnomAD |
|
|
CA345907724 rs1171777661 |
573 | D>N | No |
ClinGen gnomAD |
|
|
CA1539780 rs774348536 |
578 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1354458842 CA345906668 |
590 | A>T | No |
ClinGen gnomAD |
|
|
rs770796475 CA1539778 |
592 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA1539777 COSM1010002 rs748956536 |
596 | A>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1453557091 CA345906564 |
598 | V>G | No |
ClinGen TOPMed |
|
|
CA43350082 rs970333996 CA345906570 |
598 | V>L | No |
ClinGen TOPMed |
|
| TCGA novel | 599 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA345906519 rs1219721706 |
603 | I>V | No |
ClinGen TOPMed |
|
|
rs1246344898 CA345906447 |
608 | I>T | No |
ClinGen TOPMed |
|
|
rs755602821 CA1539775 |
610 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1232215191 CA345906373 |
615 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
rs755574015 CA1539772 |
615 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs1202408223 CA345906369 |
615 | K>R | No |
ClinGen gnomAD |
|
|
CA345905756 rs1389667494 |
617 | N>D | No |
ClinGen TOPMed |
|
|
rs764242372 CA43348651 |
618 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA1539747 rs764242372 |
618 | S>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs868095354 CA43348638 |
620 | A>V | No |
ClinGen Ensembl |
|
|
CA1539746 rs760801745 |
623 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA345905583 rs1364928747 COSM215842 |
624 | M>L | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1316478378 CA345905544 |
625 | Q>* | No |
ClinGen TOPMed |
|
|
rs1324506836 CA345905540 |
625 | Q>R | No |
ClinGen TOPMed |
|
|
CA43348616 rs369819937 |
626 | S>F | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA345905409 rs1325541701 |
631 | K>Q | No |
ClinGen TOPMed |
|
|
CA345905401 rs1479964684 |
631 | K>R | No |
ClinGen Ensembl |
|
| TCGA novel | 631 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 632 | N>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1539743 rs762954628 |
633 | C>F | No |
ClinGen ExAC gnomAD |
|
|
CA345905340 rs1458681423 |
634 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA345905280 rs1198661754 |
636 | A>G | No |
ClinGen gnomAD |
|
|
rs773128562 CA1539742 |
640 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA345905167 rs1558350214 |
641 | G>S | No |
ClinGen Ensembl |
|
|
rs1191940457 CA345905076 |
644 | V>A | No |
ClinGen gnomAD |
|
|
rs369318236 CA1539740 |
646 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs369318236 CA1539739 |
646 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA345905023 rs1244718110 |
646 | A>V | No |
ClinGen gnomAD |
|
|
CA345904977 rs1240655084 |
648 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1259197644 CA345904893 |
652 | S>F | No |
ClinGen TOPMed |
|
|
rs1330309396 CA345904816 |
655 | T>I | No |
ClinGen gnomAD |
|
|
CA345904828 rs1446839420 |
655 | T>P | No |
ClinGen TOPMed |
|
|
CA1539736 rs779513303 |
656 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA345904782 rs1302789190 |
657 | P>A | No |
ClinGen gnomAD |
|
|
rs1386927545 CA345904772 |
657 | P>R | No |
ClinGen gnomAD |
|
|
rs746363577 CA1539733 |
662 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1175816541 CA345904591 |
665 | D>N | No |
ClinGen TOPMed |
|
|
rs1175563943 CA345904544 |
667 | E>K | No |
ClinGen gnomAD |
|
|
rs1396987199 CA345903439 |
670 | D>E | No |
ClinGen gnomAD |
|
|
rs1461520639 CA345903403 |
672 | E>G | No |
ClinGen gnomAD |
|
|
rs1572292864 CA345903340 |
673 | N>I | No |
ClinGen Ensembl |
|
|
rs779256907 CA1539715 |
676 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1384932793 CA345903245 CA345903247 |
677 | N>K | No |
ClinGen gnomAD |
|
|
CA1539714 rs771516325 |
677 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA1539712 rs779252487 |
678 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs746393867 CA1539713 |
678 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374943544 CA1539711 |
679 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1539708 rs756473163 |
683 | L>I | No |
ClinGen ExAC gnomAD |
|
|
CA43345527 rs199960484 |
685 | L>P | No |
ClinGen Ensembl |
|
|
CA1539707 rs371569631 |
687 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1199610164 CA345903069 |
688 | H>N | No |
ClinGen TOPMed |
|
|
CA345903054 rs1240390052 |
688 | H>Q | No |
ClinGen TOPMed |
|
|
rs1065381 CA1539706 VAR_029826 |
691 | A>T | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs940016773 CA43345507 |
691 | A>V | No |
ClinGen Ensembl |
|
|
rs755040745 CA345902976 |
693 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755040745 CA1539705 |
693 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 695 | D>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1539704 rs750405878 |
696 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1414696380 CA345902919 |
696 | I>V | No |
ClinGen TOPMed |
|
|
rs765035959 CA1539703 |
697 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs369480332 CA1539702 |
701 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1417364204 CA345902668 |
708 | L>P | No |
ClinGen TOPMed |
|
|
CA345902663 rs1387039273 |
709 | H>R | No |
ClinGen gnomAD |
|
|
rs527298898 CA43345497 |
709 | H>Y | No |
ClinGen 1000Genomes TOPMed |
|
|
CA1539701 rs753612239 |
710 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
rs1187932089 CA345902654 |
710 | Y>H | No |
ClinGen gnomAD |
|
|
rs1356062394 CA345902608 |
712 | E>Q | No |
ClinGen TOPMed |
|
|
CA345902381 COSM389332 rs1273162940 |
715 | M>I | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs763883323 CA1539675 |
715 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA345902353 rs1438789455 |
717 | I>T | No |
ClinGen gnomAD |
|
|
CA345902286 rs1331895607 |
721 | I>F | No |
ClinGen gnomAD |
|
|
CA345902279 rs1317973083 |
721 | I>N | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 722 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 724 | I>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1539674 rs189584906 |
725 | R>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA345902222 rs1433315814 |
725 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA1539673 rs752372107 |
726 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1170293792 CA345902165 |
730 | I>T | No |
ClinGen gnomAD |
|
|
rs1478760152 CA345902147 |
732 | E>Q | No |
ClinGen gnomAD |
|
|
rs1187586672 CA345902126 |
733 | H>R | No |
ClinGen gnomAD |
|
|
rs767210375 CA1539672 |
733 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA1539671 rs759195489 |
734 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
CA1539670 rs773801158 |
736 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1032528860 CA43344355 |
737 | D>A | No |
ClinGen TOPMed |
|
|
rs755856150 CA43343057 |
743 | D>G | No |
ClinGen gnomAD |
|
|
rs755856150 CA345901900 |
743 | D>V | No |
ClinGen gnomAD |
|
|
rs749256786 CA1539659 |
745 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA1539658 rs777639840 |
746 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777639840 CA345901867 |
746 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1274032130 CA345901841 |
748 | N>S | No |
ClinGen gnomAD |
|
|
CA43343026 rs978083277 |
750 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1342413318 CA345901807 |
752 | M>T | No |
ClinGen TOPMed |
|
|
CA1539656 rs575124021 CA1539655 |
754 | M>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 755 | V>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs919502877 CA43343020 |
758 | H>R | No |
ClinGen Ensembl |
|
|
rs111884371 CA43343008 |
759 | M>T | No |
ClinGen Ensembl |
|
|
rs768798034 CA43343014 |
759 | M>V | No |
ClinGen Ensembl |
|
| TCGA novel | 762 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1286431323 CA345901648 |
764 | E>K | No |
ClinGen gnomAD |
|
|
CA1539652 rs765808400 |
765 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs762482822 CA1539651 |
766 | M>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 767 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1539649 rs765890345 |
768 | H>L | No |
ClinGen ExAC gnomAD |
|
|
CA1539647 rs777201995 |
769 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA1539648 rs777201995 |
769 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA43342960 rs1022829608 |
774 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA345901502 rs1371096267 |
774 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA43342953 rs559954325 |
775 | E>K | No |
ClinGen Ensembl |
|
|
rs1247495210 CA345901442 |
778 | N>K | No |
ClinGen TOPMed |
|
|
CA1539646 rs769051265 |
781 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1433802640 CA345901407 |
781 | D>N | No |
ClinGen TOPMed |
|
|
rs895342727 CA43342942 |
782 | A>T | No |
ClinGen TOPMed |
|
|
CA1539645 rs760819580 |
783 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1180090789 CA345901362 |
786 | K>R | No |
ClinGen gnomAD |
|
|
CA345901363 rs1180090789 |
786 | K>T | No |
ClinGen gnomAD |
|
|
CA43342929 rs1035189890 |
787 | I>M | No |
ClinGen TOPMed |
|
|
rs963642088 CA43342926 |
788 | N>H | No |
ClinGen TOPMed |
|
|
CA1539644 rs775743859 |
788 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1539643 rs772068823 |
789 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs769793573 CA345901330 |
791 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769793573 CA1539640 |
791 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA345901305 rs1287067083 |
795 | D>E | No |
ClinGen gnomAD |
|
|
CA1539638 rs780866103 |
795 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA345901301 rs1302720201 |
796 | P>S | No |
ClinGen TOPMed |
|
|
CA43342895 rs959775356 |
797 | L>V | No |
ClinGen Ensembl |
|
| TCGA novel | 798 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1539617 rs746483901 |
800 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA43339942 rs762044165 |
803 | L>I | No |
ClinGen Ensembl |
|
|
rs1016679216 CA345901209 |
807 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA1539616 rs758191510 |
809 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745501084 CA1539615 |
810 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs778578417 CA1539614 |
812 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756759148 CA1539613 |
813 | R>* | No |
ClinGen ExAC gnomAD |
|
|
rs376302946 CA345901171 |
813 | R>L | No |
ClinGen ESP ExAC gnomAD |
|
|
rs376302946 CA1539612 |
813 | R>Q | No |
ClinGen ESP ExAC gnomAD |
|
|
CA1539611 rs764711697 |
816 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs527433587 CA1539610 |
816 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA345901151 rs1192033771 |
817 | H>Y | No |
ClinGen gnomAD |
|
|
rs561822628 CA1539608 |
818 | Y>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs561822628 CA1539609 |
818 | Y>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1464695969 CA345901145 |
818 | Y>N | No |
ClinGen gnomAD |
|
|
CA1539606 rs774493900 |
820 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs766480400 CA1539605 |
822 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs762969521 CA1539604 |
824 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA345901089 rs1278536878 |
825 | H>L | No |
ClinGen TOPMed |
|
|
CA345901079 rs773140545 |
827 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA1539603 rs773140545 |
827 | D>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 828 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs768675379 CA1539602 |
830 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA1539601 rs746912004 |
831 | K>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs745519285 CA1539599 |
832 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA1539598 rs745519285 |
832 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA1539596 rs372372204 |
834 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs777144088 CA1539594 |
837 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1256033530 CA345900982 |
838 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1211583114 CA345900992 |
838 | M>V | No |
ClinGen TOPMed |
|
|
CA345900966 rs1482718128 |
839 | K>I | No |
ClinGen TOPMed |
|
| TCGA novel | 840 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs375686324 CA1539593 |
843 | L>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1265742181 CA345900900 |
844 | E>Q | No |
ClinGen TOPMed |
|
|
rs1323419913 CA345900590 |
846 | K>T | No |
ClinGen gnomAD |
|
|
CA43339127 rs199660298 |
849 | Q>R | No |
ClinGen Ensembl |
|
|
rs770774262 CA1539578 |
850 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs769123367 CA1539575 |
853 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA345900525 rs1419181440 |
855 | P>L | No |
ClinGen gnomAD |
|
|
CA1539571 rs755452714 |
857 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1539569 rs780388886 |
857 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780388886 CA1539570 |
857 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758700751 CA1539568 |
858 | I>V | No |
ClinGen ExAC |
|
| TCGA novel | 861 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1539567 rs750553094 |
862 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs765363492 CA345900475 |
863 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1539566 rs765363492 |
863 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs377206916 CA1539565 |
864 | A>P | No |
ClinGen ESP ExAC gnomAD |
|
|
CA1539564 rs377206916 |
864 | A>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA1539563 rs767603537 |
864 | A>V | No |
ClinGen ExAC |
|
| TCGA novel | 867 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1539561 rs200291411 |
868 | D>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs373639327 CA43339037 |
869 | K>E | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA345900429 rs1227734596 |
871 | I>V | No |
ClinGen gnomAD |
|
|
CA1539559 rs539254965 |
873 | R>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs539254965 CA345900415 |
873 | R>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs376420347 COSM1009994 CA1539558 |
873 | R>Q | endometrium [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs769372280 CA1539557 |
875 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA43339017 rs1021924003 |
877 | K>R | No |
ClinGen TOPMed |
|
|
CA345900369 rs1321879268 |
880 | A>T | No |
ClinGen gnomAD |
|
|
rs201259527 CA1539556 |
880 | A>V | No |
ClinGen 1000Genomes ExAC |
|
|
CA1539555 rs553663521 |
882 | H>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 883 | A>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs769214479 CA1539554 |
884 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1476923147 CA345900341 |
884 | S>N | No |
ClinGen TOPMed |
|
|
rs1456122918 CA345900314 |
888 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
CA345900312 rs780409484 |
888 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1539553 rs780409484 |
888 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1226839 rs780409484 CA1539552 |
888 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs369853393 CA1539551 |
889 | E>Q | No |
ClinGen ESP ExAC gnomAD |
|
|
CA345900288 rs1304392946 |
892 | M>V | No |
ClinGen TOPMed |
|
|
CA345900280 rs35604590 |
893 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1376686260 CA345900277 |
893 | R>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1274262639 CA345938777 |
894 | Q>K | No |
ClinGen gnomAD |
|
|
rs1226610394 CA345938775 |
894 | Q>R | No |
ClinGen gnomAD |
|
| TCGA novel | 897 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1261249457 CA345938702 |
898 | A>V | No |
ClinGen TOPMed |
|
|
rs778005317 CA1539527 |
900 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1572260934 CA345938641 |
902 | Y>S | No |
ClinGen Ensembl |
|
|
rs1446235697 CA345938602 |
904 | D>E | No |
ClinGen TOPMed |
|
|
CA345938591 rs1199232527 |
905 | L>R | No |
ClinGen TOPMed |
|
|
rs751571851 CA1539525 |
909 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1436109823 CA345938513 |
910 | R>K | No |
ClinGen gnomAD |
|
| TCGA novel | 913 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA345938456 rs1167612436 |
914 | K>Q | No |
ClinGen gnomAD |
|
| TCGA novel | 914 | K>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA345938420 rs750249329 |
915 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA345938358 rs1412025427 |
919 | L>R | No |
ClinGen TOPMed |
|
|
CA345938320 rs1421413285 |
922 | I>V | No |
ClinGen gnomAD |
|
|
CA43553895 rs149491090 |
926 | R>I | No |
ClinGen ESP |
|
|
rs1168365464 CA345938241 |
926 | R>S | No |
ClinGen gnomAD |
|
|
rs904708651 CA43553891 |
927 | F>Y | No |
ClinGen TOPMed |
|
|
VAR_052442 CA43553879 rs35257753 |
928 | K>Q | No |
ClinGen UniProt Ensembl dbSNP |
|
|
CA345938197 rs1412945481 |
929 | T>I | No |
ClinGen gnomAD |
|
|
CA1539520 rs768705711 |
930 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA345938175 rs1235729531 |
930 | Y>* | No |
ClinGen gnomAD |
|
|
CA1539521 rs765063246 |
931 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs1203309643 CA345938137 |
933 | F>I | No |
ClinGen gnomAD |
|
|
CA345938135 rs1203309643 |
933 | F>L | No |
ClinGen gnomAD |
|
|
CA43553851 rs150288069 |
934 | R>K | No |
ClinGen ESP |
|
|
rs376248274 CA43551692 |
940 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA |
|
CA345937788 rs1450279410 |
942 | K>T | No |
ClinGen gnomAD |
|
|
CA345937773 rs1181041627 |
944 | Y>F | No |
ClinGen gnomAD |
|
|
rs767998823 CA345937755 |
946 | D>E | No |
ClinGen gnomAD |
|
|
rs1260515113 CA345937758 |
946 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs138881226 CA1539504 |
946 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA345937761 rs138881226 |
946 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs61762669 CA43551685 |
947 | N>S | No |
ClinGen Ensembl |
|
|
CA345937734 rs1558328414 |
950 | S>P | No |
ClinGen Ensembl |
|
|
rs1221644068 CA345937722 |
951 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
COSM3391146 rs1007197167 CA43551666 |
952 | R>Q | pancreas Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
rs778573533 CA1539501 |
953 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA345937708 rs1435456988 |
954 | Y>C | No |
ClinGen gnomAD |
|
|
rs1200502727 CA345937701 |
955 | C>F | No |
ClinGen TOPMed |
|
|
rs757005662 CA1539500 |
962 | H>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 963 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA345937622 rs1327767743 |
965 | E>A | No |
ClinGen gnomAD |
|
|
CA1539499 rs753510909 |
967 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1539498 rs368991791 |
969 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 970 | S>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1157013696 CA345937592 |
970 | S>A | No |
ClinGen gnomAD |
|
|
CA345937590 rs1278894105 |
970 | S>L | No |
ClinGen gnomAD |
|
|
rs1240748709 CA345937557 |
972 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA345937559 rs1194643869 |
972 | Q>R | No |
ClinGen gnomAD |
|
|
CA43548333 rs577126102 |
973 | P>T | No |
ClinGen 1000Genomes |
|
|
CA1539479 rs553714258 |
976 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1539478 rs752328356 |
977 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1188833354 CA345937515 |
979 | A>P | No |
ClinGen gnomAD |
|
|
rs766968558 CA1539477 |
982 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA1539476 rs533952051 |
982 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1539474 rs142161992 |
984 | M>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1539475 rs142161992 |
984 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA345937427 rs1449974269 |
992 | R>C | No |
ClinGen gnomAD |
|
|
CA345937397 rs1371180815 |
997 | V>L | No |
ClinGen TOPMed |
|
| TCGA novel | 1001 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA345937359 rs1293428155 |
1002 | S>Y | No |
ClinGen TOPMed |
|
|
CA43548307 rs1027349907 |
1003 | L>R | No |
ClinGen Ensembl |
|
|
CA43548304 rs1001623564 |
1006 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA345937330 rs761942611 |
1007 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1539469 rs761942611 |
1007 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 1008 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs776869384 CA1539468 |
1013 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA345937231 rs1388731083 |
1021 | M>V | No |
ClinGen gnomAD |
|
|
CA345937199 rs1383898871 |
1023 | M>T | No |
ClinGen TOPMed |
|
|
rs1480860632 CA345937192 |
1024 | V>F | No |
ClinGen gnomAD |
|
|
rs184603634 CA1539446 |
1028 | I>V | No |
ClinGen 1000Genomes ExAC |
|
|
CA1539445 rs762188500 |
1029 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA345937155 rs1231403130 |
1030 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1336965775 CA345937151 |
1030 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
CA345937154 rs1231403130 |
1030 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
rs776836097 CA1539444 |
1031 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1328359007 CA345937092 |
1038 | D>G | No |
ClinGen TOPMed |
|
|
CA1539442 rs368022854 |
1041 | R>C | No |
ClinGen ESP ExAC gnomAD |
|
|
CA1539441 rs563299750 |
1041 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA1539440 rs772074323 |
1043 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs749256923 CA1539439 |
1044 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
VAR_029827 CA43547184 rs10221907 |
1046 | I>M | No |
ClinGen UniProt Ensembl dbSNP |
|
|
rs1216735235 CA345937040 |
1046 | I>V | No |
ClinGen gnomAD |
|
|
CA1539437 rs769600117 |
1048 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs200717829 CA1539435 |
1053 | M>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1539434 rs754721387 |
1054 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA1539406 rs373310470 |
1054 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs757839257 CA1539405 |
1055 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1539404 rs754232098 |
1057 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA43546920 rs954732496 |
1059 | S>G | No |
ClinGen TOPMed |
|
|
rs756423587 CA1539402 |
1059 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1205865428 CA345936930 |
1062 | I>V | No |
ClinGen gnomAD |
|
|
rs767770240 CA1539400 |
1063 | R>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA1539399 rs759752308 |
1063 | R>K | No |
ClinGen ExAC gnomAD |
|
|
COSM164478 CA43546912 rs867741404 |
1066 | R>* | bone breast [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs751723798 CA1539398 |
1066 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs998155457 CA43546909 CA43546906 |
1067 | M>I | No |
ClinGen TOPMed |
|
|
CA345936898 rs1297454203 |
1067 | M>T | No |
ClinGen gnomAD |
|
|
rs961434799 CA43546903 |
1068 | S>P | No |
ClinGen Ensembl |
|
| TCGA novel | 1069 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1539396 rs761811125 |
1073 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA345936855 rs1319701306 |
1074 | Q>E | No |
ClinGen gnomAD |
|
|
rs768516036 CA1539394 |
1076 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA345936807 rs1285379022 |
1081 | P>S | No |
ClinGen TOPMed |
|
|
rs1016092174 CA43546896 |
1082 | V>L | No |
ClinGen Ensembl |
|
|
CA1539393 rs760593265 |
1083 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA1539392 rs775393384 |
1084 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA1539389 rs373222214 |
1088 | D>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs139276977 CA43546890 CA1539388 |
1089 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1255625303 CA345936751 |
1089 | D>G | No |
ClinGen gnomAD |
|
|
rs138478503 CA1539387 |
1091 | R>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs138478503 CA1539386 |
1091 | R>T | No |
ClinGen 1000Genomes ExAC gnomAD |
No associated diseases with Q96SB8
1 regional properties for Q96SB8
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | RecF/RecN/SMC, N-terminal | 48 - 1065 | IPR003395 |
Functions
11 GO annotations of cellular component
| Name | Definition |
|---|---|
| chromosome, centromeric region | The region of a chromosome that includes the centromeric DNA and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome. |
| chromosome, telomeric region | The end of a linear chromosome, required for the integrity and maintenance of the end. A chromosome telomere usually includes a region of telomerase-encoded repeats the length of which rarely exceeds 20 bp each and that permits the formation of a telomeric loop (T-loop). The telomeric repeat region is usually preceded by a sub-telomeric region that is gene-poor but rich in repetitive elements. Some telomeres only consist of the latter part (for eg. D. melanogaster telomeres). |
| interchromatin granule | A class of nuclear body measuring 20-25 nm in diameter and distributed throughout the interchromatin space, linked together by thin fibrils. They are believed to be storage centers for various snRNAs, snRNPs, serine/arginine-rich proteins and RNA polymerase II. A typical mammalian cell contains 25-50 clusters of interchromatin granules. Interchromatin granule clusters do not contain the heterogeneous nuclear RNA-binding proteins (hnRNPs). |
| mitotic spindle pole | Either of the ends of a mitotic spindle, a spindle that forms as part of mitosis, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules. |
| nuclear speck | A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| PML body | A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection. |
| sex chromosome | A chromosome involved in sex determination. |
| site of double-strand break | A region of a chromosome at which a DNA double-strand break has occurred. DNA damage signaling and repair proteins accumulate at the lesion to respond to the damage and repair the DNA to form a continuous DNA helix. |
| Smc5-Smc6 complex | A conserved complex that contains a heterodimer of SMC proteins (Smc5p and Smc6p, or homologs thereof) and several other proteins, and is involved in DNA repair and maintaining cell cycle arrest following DNA damage. In S. cerevisiae, this is an octameric complex called Mms21-Smc5-Smc6 complex, with at least five of its subunits conserved in fission yeast and humans. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| damaged DNA binding | Binding to damaged DNA. |
| single-stranded DNA binding | Binding to single-stranded DNA. |
| ubiquitin protein ligase binding | Binding to a ubiquitin protein ligase enzyme, any of the E3 proteins. |
7 GO annotations of biological process
| Name | Definition |
|---|---|
| cellular response to DNA damage stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism. |
| cellular senescence | A cell aging process stimulated in response to cellular stress, whereby normal cells lose the ability to divide through irreversible cell cycle arrest. |
| double-strand break repair via homologous recombination | The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule. |
| positive regulation of chromosome segregation | Any process that activates or increases the frequency, rate or extent of chromosome segregation, the process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets. |
| protein sumoylation | The process in which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxy-terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein. |
| regulation of telomere maintenance | Any process that modulates the frequency, rate or extent of a process that affects and monitors the activity of telomeric proteins and the length of telomeric DNA. |
| telomere maintenance via recombination | Any recombinational process that contributes to the maintenance of proper telomeric length. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAKRKEENFS | SPKNAKRPRQ | EELEDFDKDG | DEDECKGTTL | TAAEVGIIES | IHLKNFMCHS |
| 70 | 80 | 90 | 100 | 110 | 120 |
| MLGPFKFGSN | VNFVVGNNGS | GKSAVLTALI | VGLGGRAVAT | NRGSSLKGFV | KDGQNSADIS |
| 130 | 140 | 150 | 160 | 170 | 180 |
| ITLRNRGDDA | FKASVYGNSI | LIQQHISIDG | SRSYKLKSAT | GSVVSTRKEE | LIAILDHFNI |
| 190 | 200 | 210 | 220 | 230 | 240 |
| QVDNPVSVLT | QEMSKQFLQS | KNEGDKYKFF | MKATQLEQMK | EDYSYIMETK | ERTKEQIHQG |
| 250 | 260 | 270 | 280 | 290 | 300 |
| EERLTELKRQ | CVEKEERFQS | IAGLSTMKTN | LESLKHEMAW | AVVNEIEKQL | NAIRDNIKIG |
| 310 | 320 | 330 | 340 | 350 | 360 |
| EDRAARLDRK | MEEQQVRLNE | AEQKYKDIQD | KLEKISEETN | ARAPECMALK | ADVVAKKRAY |
| 370 | 380 | 390 | 400 | 410 | 420 |
| NEAEVLYNRS | LNEYKALKKD | DEQLCKRIEE | LKKSTDQSLE | PERLERQKKI | SWLKERVKAF |
| 430 | 440 | 450 | 460 | 470 | 480 |
| QNQENSVNQE | IEQFQQAIEK | DKEEHGKIKR | EELDVKHALS | YNQRQLKELK | DSKTDRLKRF |
| 490 | 500 | 510 | 520 | 530 | 540 |
| GPNVPALLEA | IDDAYRQGHF | TYKPVGPLGA | CIHLRDPELA | LAIESCLKGL | LQAYCCHNHA |
| 550 | 560 | 570 | 580 | 590 | 600 |
| DERVLQALMK | RFYLPGTSRP | PIIVSEFRNE | IYDVRHRAAY | HPDFPTVLTA | LEIDNAVVAN |
| 610 | 620 | 630 | 640 | 650 | 660 |
| SLIDMRGIET | VLLIKNNSVA | RAVMQSQKPP | KNCREAFTAD | GDQVFAGRYY | SSENTRPKFL |
| 670 | 680 | 690 | 700 | 710 | 720 |
| SRDVDSEISD | LENEVENKTA | QILNLQQHLS | ALEKDIKHNE | ELLKRCQLHY | KELKMKIRKN |
| 730 | 740 | 750 | 760 | 770 | 780 |
| ISEIRELENI | EEHQSVDIAT | LEDEAQENKS | KMKMVEEHME | QQKENMEHLK | SLKIEAENKY |
| 790 | 800 | 810 | 820 | 830 | 840 |
| DAIKFKINQL | SELADPLKDE | LNLADSEVDN | QKRGKRHYEE | KQKEHLDTLN | KKKRELDMKE |
| 850 | 860 | 870 | 880 | 890 | 900 |
| KELEEKMSQA | RQICPERIEV | EKSASILDKE | INRLRQKIQA | EHASHGDREE | IMRQYQEARE |
| 910 | 920 | 930 | 940 | 950 | 960 |
| TYLDLDSKVR | TLKKFIKLLG | EIMEHRFKTY | QQFRRCLTLR | CKLYFDNLLS | QRAYCGKMNF |
| 970 | 980 | 990 | 1000 | 1010 | 1020 |
| DHKNETLSIS | VQPGEGNKAA | FNDMRALSGG | ERSFSTVCFI | LSLWSIAESP | FRCLDEFDVY |
| 1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
| MDMVNRRIAM | DLILKMADSQ | RFRQFILLTP | QSMSSLPSSK | LIRILRMSDP | ERGQTTLPFR |
| 1090 | |||||
| PVTQEEDDDQ | R |